FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KSDA1479, 1011 aa 1>>>pF1KSDA1479 1011 - 1011 aa - 1011 aa Library: /omim/omim.rfq.tfa 60827320 residues in 85289 sequences Statistics: Expectation_n fit: rho(ln(x))= 9.7114+/-0.000452; mu= 0.1109+/- 0.028 mean_var=216.7380+/-45.851, 0's: 0 Z-trim(117.2): 157 B-trim: 1776 in 3/53 Lambda= 0.087118 statistics sampled from 28906 (29080) to 28906 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.685), E-opt: 0.2 (0.341), width: 16 Scan time: 11.560 The best scores are: opt bits E(85289) NP_065909 (OMIM: 609295) semaphorin-6D isoform 1 p (1011) 6882 878.8 0 XP_011520382 (OMIM: 609295) PREDICTED: semaphorin- (1011) 6882 878.8 0 NP_001185928 (OMIM: 609295) semaphorin-6D isoform (1011) 6882 878.8 0 XP_016878109 (OMIM: 609295) PREDICTED: semaphorin- (1017) 6617 845.5 0 XP_011520381 (OMIM: 609295) PREDICTED: semaphorin- (1017) 6617 845.5 0 NP_705870 (OMIM: 609295) semaphorin-6D isoform 3 p (1017) 6617 845.5 0 XP_016878107 (OMIM: 609295) PREDICTED: semaphorin- (1067) 3984 514.6 1.1e-144 XP_011520378 (OMIM: 609295) PREDICTED: semaphorin- (1067) 3984 514.6 1.1e-144 XP_016878108 (OMIM: 609295) PREDICTED: semaphorin- (1030) 3979 514.0 1.7e-144 XP_011520380 (OMIM: 609295) PREDICTED: semaphorin- (1030) 3979 514.0 1.7e-144 XP_016878106 (OMIM: 609295) PREDICTED: semaphorin- (1086) 3979 514.0 1.7e-144 XP_011520377 (OMIM: 609295) PREDICTED: semaphorin- (1086) 3979 514.0 1.7e-144 XP_005254742 (OMIM: 609295) PREDICTED: semaphorin- (1086) 3979 514.0 1.7e-144 XP_005254743 (OMIM: 609295) PREDICTED: semaphorin- (1086) 3979 514.0 1.7e-144 NP_705872 (OMIM: 609295) semaphorin-6D isoform 5 p ( 597) 3747 484.7 6.3e-136 XP_005254746 (OMIM: 609295) PREDICTED: semaphorin- (1054) 3747 484.8 1e-135 XP_011520379 (OMIM: 609295) PREDICTED: semaphorin- (1054) 3747 484.8 1e-135 NP_705869 (OMIM: 609295) semaphorin-6D isoform 2 p ( 998) 3746 484.7 1.1e-135 XP_011520383 (OMIM: 609295) PREDICTED: semaphorin- ( 998) 3746 484.7 1.1e-135 XP_016878110 (OMIM: 609295) PREDICTED: semaphorin- ( 998) 3746 484.7 1.1e-135 XP_005254744 (OMIM: 609295) PREDICTED: semaphorin- (1073) 3742 484.2 1.6e-135 NP_705871 (OMIM: 609295) semaphorin-6D isoform 4 p (1073) 3742 484.2 1.6e-135 NP_079242 (OMIM: 609295) semaphorin-6D isoform 6 p ( 476) 3220 418.4 4.5e-116 XP_016878111 (OMIM: 609295) PREDICTED: semaphorin- ( 620) 2904 378.8 5.1e-104 XP_005272099 (OMIM: 605885) PREDICTED: semaphorin- ( 975) 2724 356.2 4.8e-97 NP_065847 (OMIM: 605885) semaphorin-6A isoform 2 p (1030) 2434 319.8 4.7e-86 NP_001287709 (OMIM: 605885) semaphorin-6A isoform (1047) 2434 319.8 4.8e-86 XP_016865164 (OMIM: 605885) PREDICTED: semaphorin- (1052) 2434 319.8 4.8e-86 XP_006714726 (OMIM: 605885) PREDICTED: semaphorin- (1052) 2434 319.8 4.8e-86 XP_016855568 (OMIM: 609294) PREDICTED: semaphorin- ( 930) 2147 283.7 3.1e-75 NP_112175 (OMIM: 609294) semaphorin-6C isoform 2 p ( 930) 2147 283.7 3.1e-75 XP_016855567 (OMIM: 609294) PREDICTED: semaphorin- ( 930) 2147 283.7 3.1e-75 XP_011525942 (OMIM: 608873) PREDICTED: semaphorin- ( 894) 2079 275.2 1.1e-72 XP_011525941 (OMIM: 608873) PREDICTED: semaphorin- ( 894) 2079 275.2 1.1e-72 NP_115484 (OMIM: 608873) semaphorin-6B precursor [ ( 888) 2014 267.0 3.3e-70 NP_001171532 (OMIM: 609294) semaphorin-6C isoform ( 962) 2001 265.4 1.1e-69 XP_016855564 (OMIM: 609294) PREDICTED: semaphorin- ( 962) 2001 265.4 1.1e-69 XP_005244892 (OMIM: 609294) PREDICTED: semaphorin- ( 962) 2001 265.4 1.1e-69 XP_016855566 (OMIM: 609294) PREDICTED: semaphorin- ( 962) 2001 265.4 1.1e-69 XP_016855565 (OMIM: 609294) PREDICTED: semaphorin- ( 962) 2001 265.4 1.1e-69 XP_011525943 (OMIM: 608873) PREDICTED: semaphorin- ( 578) 1902 252.8 3.9e-66 XP_016865165 (OMIM: 605885) PREDICTED: semaphorin- ( 904) 1899 252.5 7.4e-66 NP_001171533 (OMIM: 609294) semaphorin-6C isoform ( 922) 1308 178.3 1.7e-43 XP_016855569 (OMIM: 609294) PREDICTED: semaphorin- ( 922) 1308 178.3 1.7e-43 XP_016855570 (OMIM: 609294) PREDICTED: semaphorin- ( 922) 1308 178.3 1.7e-43 XP_016855571 (OMIM: 609294) PREDICTED: semaphorin- ( 697) 1106 152.8 6e-36 XP_005250168 (OMIM: 603961,614897) PREDICTED: sema ( 771) 923 129.8 5.5e-29 XP_006715902 (OMIM: 603961,614897) PREDICTED: sema ( 771) 923 129.8 5.5e-29 XP_016867162 (OMIM: 603961,614897) PREDICTED: sema ( 771) 923 129.8 5.5e-29 XP_005250167 (OMIM: 603961,614897) PREDICTED: sema ( 771) 923 129.8 5.5e-29 >>NP_065909 (OMIM: 609295) semaphorin-6D isoform 1 precu (1011 aa) initn: 6882 init1: 6882 opt: 6882 Z-score: 4687.3 bits: 878.8 E(85289): 0 Smith-Waterman score: 6882; 100.0% identity (100.0% similar) in 1011 aa overlap (1-1011:1-1011) 10 20 30 40 50 60 pF1KSD MRVFLLCAYILLLMVSQLRAVSFPEDDEPLNTVDYHYSRQYPVFRGRPSGNESQHRLDFQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_065 MRVFLLCAYILLLMVSQLRAVSFPEDDEPLNTVDYHYSRQYPVFRGRPSGNESQHRLDFQ 10 20 30 40 50 60 70 80 90 100 110 120 pF1KSD LMLKIRDTLYIAGRDQVYTVNLNEMPKTEVIPNKKLTWRSRQQDRENCAMKGKHKDECHN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_065 LMLKIRDTLYIAGRDQVYTVNLNEMPKTEVIPNKKLTWRSRQQDRENCAMKGKHKDECHN 70 80 90 100 110 120 130 140 150 160 170 180 pF1KSD FIKVFVPRNDEMVFVCGTNAFNPMCRYYRLSTLEYDGEEISGLARCPFDARQTNVALFAD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_065 FIKVFVPRNDEMVFVCGTNAFNPMCRYYRLSTLEYDGEEISGLARCPFDARQTNVALFAD 130 140 150 160 170 180 190 200 210 220 230 240 pF1KSD GKLYSATVADFLASDAVIYRSMGDGSALRTIKYDSKWIKEPHFLHAIEYGNYVYFFFREI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_065 GKLYSATVADFLASDAVIYRSMGDGSALRTIKYDSKWIKEPHFLHAIEYGNYVYFFFREI 190 200 210 220 230 240 250 260 270 280 290 300 pF1KSD AVEHNNLGKAVYSRVARICKNDMGGSQRVLEKHWTSFLKARLNCSVPGDSFFYFDVLQSI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_065 AVEHNNLGKAVYSRVARICKNDMGGSQRVLEKHWTSFLKARLNCSVPGDSFFYFDVLQSI 250 260 270 280 290 300 310 320 330 340 350 360 pF1KSD TDIIQINGIPTVVGVFTTQLNSIPGSAVCAFSMDDIEKVFKGRFKEQKTPDSVWTAVPED :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_065 TDIIQINGIPTVVGVFTTQLNSIPGSAVCAFSMDDIEKVFKGRFKEQKTPDSVWTAVPED 310 320 330 340 350 360 370 380 390 400 410 420 pF1KSD KVPKPRPGCCAKHGLAEAYKTSIDFPDETLSFIKSHPLMDSAVPPIADEPWFTKTRVRYR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_065 KVPKPRPGCCAKHGLAEAYKTSIDFPDETLSFIKSHPLMDSAVPPIADEPWFTKTRVRYR 370 380 390 400 410 420 430 440 450 460 470 480 pF1KSD LTAISVDHSAGPYQNYTVIFVGSEAGMVLKVLAKTSPFSLNDSVLLEEIEAYNHAKCSAE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_065 LTAISVDHSAGPYQNYTVIFVGSEAGMVLKVLAKTSPFSLNDSVLLEEIEAYNHAKCSAE 430 440 450 460 470 480 490 500 510 520 530 540 pF1KSD NEEDKKVISLQLDKDHHALYVAFSSCIIRIPLSRCERYGSCKKSCIASRDPYCGWLSQGS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_065 NEEDKKVISLQLDKDHHALYVAFSSCIIRIPLSRCERYGSCKKSCIASRDPYCGWLSQGS 490 500 510 520 530 540 550 560 570 580 590 600 pF1KSD CGRVTPGMLLLTEDFFAFHNHSAEGYEQDTEFGNTAHLGDCHGVRWEVQSGESNQMVHMN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_065 CGRVTPGMLLLTEDFFAFHNHSAEGYEQDTEFGNTAHLGDCHGVRWEVQSGESNQMVHMN 550 560 570 580 590 600 610 620 630 640 650 660 pF1KSD VLITCVFAAFVLGAFIAGVAVYCYRDMFVRKNRKIHKDAESAQSCTDSSGSFAKLNGLFD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_065 VLITCVFAAFVLGAFIAGVAVYCYRDMFVRKNRKIHKDAESAQSCTDSSGSFAKLNGLFD 610 620 630 640 650 660 670 680 690 700 710 720 pF1KSD SPVKEYQQNIDSPKLYSNLLTSRKELPPNGDTKSMVMDHRGQPPELAALPTPESTPVLHQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_065 SPVKEYQQNIDSPKLYSNLLTSRKELPPNGDTKSMVMDHRGQPPELAALPTPESTPVLHQ 670 680 690 700 710 720 730 740 750 760 770 780 pF1KSD KTLQAMKSHSEKAHGHGASRKETPQFFPSSPPPHSPLSHGHIPSAIVLPNATHDYNTSFS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_065 KTLQAMKSHSEKAHGHGASRKETPQFFPSSPPPHSPLSHGHIPSAIVLPNATHDYNTSFS 730 740 750 760 770 780 790 800 810 820 830 840 pF1KSD NSNAHKAEKKLQNIDHPLTKSSSKRDHRRSVDSRNTLNDLLKHLNDPNSNPKAIMGDIQM :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_065 NSNAHKAEKKLQNIDHPLTKSSSKRDHRRSVDSRNTLNDLLKHLNDPNSNPKAIMGDIQM 790 800 810 820 830 840 850 860 870 880 890 900 pF1KSD AHQNLMLDPMGSMSEVPPKVPNREASLYSPPSTLPRNSPTKRVDVPTTPGVPMTSLERQR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_065 AHQNLMLDPMGSMSEVPPKVPNREASLYSPPSTLPRNSPTKRVDVPTTPGVPMTSLERQR 850 860 870 880 890 900 910 920 930 940 950 960 pF1KSD GYHKNSSQRHSISAMPKNLNSPNGVLLSRQPSMNRGGYMPTPTGAKVDYIQGTPVSVHLQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_065 GYHKNSSQRHSISAMPKNLNSPNGVLLSRQPSMNRGGYMPTPTGAKVDYIQGTPVSVHLQ 910 920 930 940 950 960 970 980 990 1000 1010 pF1KSD PSLSRQSSYTSNGTLPRTGLKRTPSLKPDVPPKPSFVPQTPSVRPLNKYTY ::::::::::::::::::::::::::::::::::::::::::::::::::: NP_065 PSLSRQSSYTSNGTLPRTGLKRTPSLKPDVPPKPSFVPQTPSVRPLNKYTY 970 980 990 1000 1010 >>XP_011520382 (OMIM: 609295) PREDICTED: semaphorin-6D i (1011 aa) initn: 6882 init1: 6882 opt: 6882 Z-score: 4687.3 bits: 878.8 E(85289): 0 Smith-Waterman score: 6882; 100.0% identity (100.0% similar) in 1011 aa overlap (1-1011:1-1011) 10 20 30 40 50 60 pF1KSD MRVFLLCAYILLLMVSQLRAVSFPEDDEPLNTVDYHYSRQYPVFRGRPSGNESQHRLDFQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_011 MRVFLLCAYILLLMVSQLRAVSFPEDDEPLNTVDYHYSRQYPVFRGRPSGNESQHRLDFQ 10 20 30 40 50 60 70 80 90 100 110 120 pF1KSD LMLKIRDTLYIAGRDQVYTVNLNEMPKTEVIPNKKLTWRSRQQDRENCAMKGKHKDECHN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_011 LMLKIRDTLYIAGRDQVYTVNLNEMPKTEVIPNKKLTWRSRQQDRENCAMKGKHKDECHN 70 80 90 100 110 120 130 140 150 160 170 180 pF1KSD FIKVFVPRNDEMVFVCGTNAFNPMCRYYRLSTLEYDGEEISGLARCPFDARQTNVALFAD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_011 FIKVFVPRNDEMVFVCGTNAFNPMCRYYRLSTLEYDGEEISGLARCPFDARQTNVALFAD 130 140 150 160 170 180 190 200 210 220 230 240 pF1KSD GKLYSATVADFLASDAVIYRSMGDGSALRTIKYDSKWIKEPHFLHAIEYGNYVYFFFREI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_011 GKLYSATVADFLASDAVIYRSMGDGSALRTIKYDSKWIKEPHFLHAIEYGNYVYFFFREI 190 200 210 220 230 240 250 260 270 280 290 300 pF1KSD AVEHNNLGKAVYSRVARICKNDMGGSQRVLEKHWTSFLKARLNCSVPGDSFFYFDVLQSI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_011 AVEHNNLGKAVYSRVARICKNDMGGSQRVLEKHWTSFLKARLNCSVPGDSFFYFDVLQSI 250 260 270 280 290 300 310 320 330 340 350 360 pF1KSD TDIIQINGIPTVVGVFTTQLNSIPGSAVCAFSMDDIEKVFKGRFKEQKTPDSVWTAVPED :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_011 TDIIQINGIPTVVGVFTTQLNSIPGSAVCAFSMDDIEKVFKGRFKEQKTPDSVWTAVPED 310 320 330 340 350 360 370 380 390 400 410 420 pF1KSD KVPKPRPGCCAKHGLAEAYKTSIDFPDETLSFIKSHPLMDSAVPPIADEPWFTKTRVRYR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_011 KVPKPRPGCCAKHGLAEAYKTSIDFPDETLSFIKSHPLMDSAVPPIADEPWFTKTRVRYR 370 380 390 400 410 420 430 440 450 460 470 480 pF1KSD LTAISVDHSAGPYQNYTVIFVGSEAGMVLKVLAKTSPFSLNDSVLLEEIEAYNHAKCSAE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_011 LTAISVDHSAGPYQNYTVIFVGSEAGMVLKVLAKTSPFSLNDSVLLEEIEAYNHAKCSAE 430 440 450 460 470 480 490 500 510 520 530 540 pF1KSD NEEDKKVISLQLDKDHHALYVAFSSCIIRIPLSRCERYGSCKKSCIASRDPYCGWLSQGS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_011 NEEDKKVISLQLDKDHHALYVAFSSCIIRIPLSRCERYGSCKKSCIASRDPYCGWLSQGS 490 500 510 520 530 540 550 560 570 580 590 600 pF1KSD CGRVTPGMLLLTEDFFAFHNHSAEGYEQDTEFGNTAHLGDCHGVRWEVQSGESNQMVHMN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_011 CGRVTPGMLLLTEDFFAFHNHSAEGYEQDTEFGNTAHLGDCHGVRWEVQSGESNQMVHMN 550 560 570 580 590 600 610 620 630 640 650 660 pF1KSD VLITCVFAAFVLGAFIAGVAVYCYRDMFVRKNRKIHKDAESAQSCTDSSGSFAKLNGLFD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_011 VLITCVFAAFVLGAFIAGVAVYCYRDMFVRKNRKIHKDAESAQSCTDSSGSFAKLNGLFD 610 620 630 640 650 660 670 680 690 700 710 720 pF1KSD SPVKEYQQNIDSPKLYSNLLTSRKELPPNGDTKSMVMDHRGQPPELAALPTPESTPVLHQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_011 SPVKEYQQNIDSPKLYSNLLTSRKELPPNGDTKSMVMDHRGQPPELAALPTPESTPVLHQ 670 680 690 700 710 720 730 740 750 760 770 780 pF1KSD KTLQAMKSHSEKAHGHGASRKETPQFFPSSPPPHSPLSHGHIPSAIVLPNATHDYNTSFS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_011 KTLQAMKSHSEKAHGHGASRKETPQFFPSSPPPHSPLSHGHIPSAIVLPNATHDYNTSFS 730 740 750 760 770 780 790 800 810 820 830 840 pF1KSD NSNAHKAEKKLQNIDHPLTKSSSKRDHRRSVDSRNTLNDLLKHLNDPNSNPKAIMGDIQM :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_011 NSNAHKAEKKLQNIDHPLTKSSSKRDHRRSVDSRNTLNDLLKHLNDPNSNPKAIMGDIQM 790 800 810 820 830 840 850 860 870 880 890 900 pF1KSD AHQNLMLDPMGSMSEVPPKVPNREASLYSPPSTLPRNSPTKRVDVPTTPGVPMTSLERQR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_011 AHQNLMLDPMGSMSEVPPKVPNREASLYSPPSTLPRNSPTKRVDVPTTPGVPMTSLERQR 850 860 870 880 890 900 910 920 930 940 950 960 pF1KSD GYHKNSSQRHSISAMPKNLNSPNGVLLSRQPSMNRGGYMPTPTGAKVDYIQGTPVSVHLQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_011 GYHKNSSQRHSISAMPKNLNSPNGVLLSRQPSMNRGGYMPTPTGAKVDYIQGTPVSVHLQ 910 920 930 940 950 960 970 980 990 1000 1010 pF1KSD PSLSRQSSYTSNGTLPRTGLKRTPSLKPDVPPKPSFVPQTPSVRPLNKYTY ::::::::::::::::::::::::::::::::::::::::::::::::::: XP_011 PSLSRQSSYTSNGTLPRTGLKRTPSLKPDVPPKPSFVPQTPSVRPLNKYTY 970 980 990 1000 1010 >>NP_001185928 (OMIM: 609295) semaphorin-6D isoform 1 pr (1011 aa) initn: 6882 init1: 6882 opt: 6882 Z-score: 4687.3 bits: 878.8 E(85289): 0 Smith-Waterman score: 6882; 100.0% identity (100.0% similar) in 1011 aa overlap (1-1011:1-1011) 10 20 30 40 50 60 pF1KSD MRVFLLCAYILLLMVSQLRAVSFPEDDEPLNTVDYHYSRQYPVFRGRPSGNESQHRLDFQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 MRVFLLCAYILLLMVSQLRAVSFPEDDEPLNTVDYHYSRQYPVFRGRPSGNESQHRLDFQ 10 20 30 40 50 60 70 80 90 100 110 120 pF1KSD LMLKIRDTLYIAGRDQVYTVNLNEMPKTEVIPNKKLTWRSRQQDRENCAMKGKHKDECHN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 LMLKIRDTLYIAGRDQVYTVNLNEMPKTEVIPNKKLTWRSRQQDRENCAMKGKHKDECHN 70 80 90 100 110 120 130 140 150 160 170 180 pF1KSD FIKVFVPRNDEMVFVCGTNAFNPMCRYYRLSTLEYDGEEISGLARCPFDARQTNVALFAD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 FIKVFVPRNDEMVFVCGTNAFNPMCRYYRLSTLEYDGEEISGLARCPFDARQTNVALFAD 130 140 150 160 170 180 190 200 210 220 230 240 pF1KSD GKLYSATVADFLASDAVIYRSMGDGSALRTIKYDSKWIKEPHFLHAIEYGNYVYFFFREI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 GKLYSATVADFLASDAVIYRSMGDGSALRTIKYDSKWIKEPHFLHAIEYGNYVYFFFREI 190 200 210 220 230 240 250 260 270 280 290 300 pF1KSD AVEHNNLGKAVYSRVARICKNDMGGSQRVLEKHWTSFLKARLNCSVPGDSFFYFDVLQSI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 AVEHNNLGKAVYSRVARICKNDMGGSQRVLEKHWTSFLKARLNCSVPGDSFFYFDVLQSI 250 260 270 280 290 300 310 320 330 340 350 360 pF1KSD TDIIQINGIPTVVGVFTTQLNSIPGSAVCAFSMDDIEKVFKGRFKEQKTPDSVWTAVPED :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 TDIIQINGIPTVVGVFTTQLNSIPGSAVCAFSMDDIEKVFKGRFKEQKTPDSVWTAVPED 310 320 330 340 350 360 370 380 390 400 410 420 pF1KSD KVPKPRPGCCAKHGLAEAYKTSIDFPDETLSFIKSHPLMDSAVPPIADEPWFTKTRVRYR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 KVPKPRPGCCAKHGLAEAYKTSIDFPDETLSFIKSHPLMDSAVPPIADEPWFTKTRVRYR 370 380 390 400 410 420 430 440 450 460 470 480 pF1KSD LTAISVDHSAGPYQNYTVIFVGSEAGMVLKVLAKTSPFSLNDSVLLEEIEAYNHAKCSAE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 LTAISVDHSAGPYQNYTVIFVGSEAGMVLKVLAKTSPFSLNDSVLLEEIEAYNHAKCSAE 430 440 450 460 470 480 490 500 510 520 530 540 pF1KSD NEEDKKVISLQLDKDHHALYVAFSSCIIRIPLSRCERYGSCKKSCIASRDPYCGWLSQGS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 NEEDKKVISLQLDKDHHALYVAFSSCIIRIPLSRCERYGSCKKSCIASRDPYCGWLSQGS 490 500 510 520 530 540 550 560 570 580 590 600 pF1KSD CGRVTPGMLLLTEDFFAFHNHSAEGYEQDTEFGNTAHLGDCHGVRWEVQSGESNQMVHMN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 CGRVTPGMLLLTEDFFAFHNHSAEGYEQDTEFGNTAHLGDCHGVRWEVQSGESNQMVHMN 550 560 570 580 590 600 610 620 630 640 650 660 pF1KSD VLITCVFAAFVLGAFIAGVAVYCYRDMFVRKNRKIHKDAESAQSCTDSSGSFAKLNGLFD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 VLITCVFAAFVLGAFIAGVAVYCYRDMFVRKNRKIHKDAESAQSCTDSSGSFAKLNGLFD 610 620 630 640 650 660 670 680 690 700 710 720 pF1KSD SPVKEYQQNIDSPKLYSNLLTSRKELPPNGDTKSMVMDHRGQPPELAALPTPESTPVLHQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 SPVKEYQQNIDSPKLYSNLLTSRKELPPNGDTKSMVMDHRGQPPELAALPTPESTPVLHQ 670 680 690 700 710 720 730 740 750 760 770 780 pF1KSD KTLQAMKSHSEKAHGHGASRKETPQFFPSSPPPHSPLSHGHIPSAIVLPNATHDYNTSFS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 KTLQAMKSHSEKAHGHGASRKETPQFFPSSPPPHSPLSHGHIPSAIVLPNATHDYNTSFS 730 740 750 760 770 780 790 800 810 820 830 840 pF1KSD NSNAHKAEKKLQNIDHPLTKSSSKRDHRRSVDSRNTLNDLLKHLNDPNSNPKAIMGDIQM :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 NSNAHKAEKKLQNIDHPLTKSSSKRDHRRSVDSRNTLNDLLKHLNDPNSNPKAIMGDIQM 790 800 810 820 830 840 850 860 870 880 890 900 pF1KSD AHQNLMLDPMGSMSEVPPKVPNREASLYSPPSTLPRNSPTKRVDVPTTPGVPMTSLERQR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 AHQNLMLDPMGSMSEVPPKVPNREASLYSPPSTLPRNSPTKRVDVPTTPGVPMTSLERQR 850 860 870 880 890 900 910 920 930 940 950 960 pF1KSD GYHKNSSQRHSISAMPKNLNSPNGVLLSRQPSMNRGGYMPTPTGAKVDYIQGTPVSVHLQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 GYHKNSSQRHSISAMPKNLNSPNGVLLSRQPSMNRGGYMPTPTGAKVDYIQGTPVSVHLQ 910 920 930 940 950 960 970 980 990 1000 1010 pF1KSD PSLSRQSSYTSNGTLPRTGLKRTPSLKPDVPPKPSFVPQTPSVRPLNKYTY ::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 PSLSRQSSYTSNGTLPRTGLKRTPSLKPDVPPKPSFVPQTPSVRPLNKYTY 970 980 990 1000 1010 >>XP_016878109 (OMIM: 609295) PREDICTED: semaphorin-6D i (1017 aa) initn: 6637 init1: 3742 opt: 6617 Z-score: 4507.3 bits: 845.5 E(85289): 0 Smith-Waterman score: 6708; 96.9% identity (96.9% similar) in 1030 aa overlap (1-1011:1-1017) 10 20 30 40 50 60 pF1KSD MRVFLLCAYILLLMVSQLRAVSFPEDDEPLNTVDYHYSRQYPVFRGRPSGNESQHRLDFQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 MRVFLLCAYILLLMVSQLRAVSFPEDDEPLNTVDYHYSRQYPVFRGRPSGNESQHRLDFQ 10 20 30 40 50 60 70 80 90 100 110 120 pF1KSD LMLKIRDTLYIAGRDQVYTVNLNEMPKTEVIPNKKLTWRSRQQDRENCAMKGKHKDECHN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 LMLKIRDTLYIAGRDQVYTVNLNEMPKTEVIPNKKLTWRSRQQDRENCAMKGKHKDECHN 70 80 90 100 110 120 130 140 150 160 170 180 pF1KSD FIKVFVPRNDEMVFVCGTNAFNPMCRYYRLSTLEYDGEEISGLARCPFDARQTNVALFAD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 FIKVFVPRNDEMVFVCGTNAFNPMCRYYRLSTLEYDGEEISGLARCPFDARQTNVALFAD 130 140 150 160 170 180 190 200 210 220 230 240 pF1KSD GKLYSATVADFLASDAVIYRSMGDGSALRTIKYDSKWIKEPHFLHAIEYGNYVYFFFREI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 GKLYSATVADFLASDAVIYRSMGDGSALRTIKYDSKWIKEPHFLHAIEYGNYVYFFFREI 190 200 210 220 230 240 250 260 270 280 290 300 pF1KSD AVEHNNLGKAVYSRVARICKNDMGGSQRVLEKHWTSFLKARLNCSVPGDSFFYFDVLQSI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 AVEHNNLGKAVYSRVARICKNDMGGSQRVLEKHWTSFLKARLNCSVPGDSFFYFDVLQSI 250 260 270 280 290 300 310 320 330 340 350 360 pF1KSD TDIIQINGIPTVVGVFTTQLNSIPGSAVCAFSMDDIEKVFKGRFKEQKTPDSVWTAVPED :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 TDIIQINGIPTVVGVFTTQLNSIPGSAVCAFSMDDIEKVFKGRFKEQKTPDSVWTAVPED 310 320 330 340 350 360 370 380 390 400 410 420 pF1KSD KVPKPRPGCCAKHGLAEAYKTSIDFPDETLSFIKSHPLMDSAVPPIADEPWFTKTRVRYR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 KVPKPRPGCCAKHGLAEAYKTSIDFPDETLSFIKSHPLMDSAVPPIADEPWFTKTRVRYR 370 380 390 400 410 420 430 440 450 460 470 480 pF1KSD LTAISVDHSAGPYQNYTVIFVGSEAGMVLKVLAKTSPFSLNDSVLLEEIEAYNHAKCSAE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 LTAISVDHSAGPYQNYTVIFVGSEAGMVLKVLAKTSPFSLNDSVLLEEIEAYNHAKCSAE 430 440 450 460 470 480 490 500 510 520 530 540 pF1KSD NEEDKKVISLQLDKDHHALYVAFSSCIIRIPLSRCERYGSCKKSCIASRDPYCGWLSQGS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 NEEDKKVISLQLDKDHHALYVAFSSCIIRIPLSRCERYGSCKKSCIASRDPYCGWLSQGS 490 500 510 520 530 540 550 560 570 580 pF1KSD CGRVTPGMLLLTEDFFAFHNHSAEGYEQDTEFGNTAHLGDCH------------------ ::::::::: :::::::::::::::::::: XP_016 CGRVTPGML-------------AEGYEQDTEFGNTAHLGDCHEILPTSTTPDYKIFGGPT 550 560 570 580 590 600 610 620 630 640 pF1KSD -GVRWEVQSGESNQMVHMNVLITCVFAAFVLGAFIAGVAVYCYRDMFVRKNRKIHKDAES ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 SGVRWEVQSGESNQMVHMNVLITCVFAAFVLGAFIAGVAVYCYRDMFVRKNRKIHKDAES 590 600 610 620 630 640 650 660 670 680 690 700 pF1KSD AQSCTDSSGSFAKLNGLFDSPVKEYQQNIDSPKLYSNLLTSRKELPPNGDTKSMVMDHRG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 AQSCTDSSGSFAKLNGLFDSPVKEYQQNIDSPKLYSNLLTSRKELPPNGDTKSMVMDHRG 650 660 670 680 690 700 710 720 730 740 750 760 pF1KSD QPPELAALPTPESTPVLHQKTLQAMKSHSEKAHGHGASRKETPQFFPSSPPPHSPLSHGH :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 QPPELAALPTPESTPVLHQKTLQAMKSHSEKAHGHGASRKETPQFFPSSPPPHSPLSHGH 710 720 730 740 750 760 770 780 790 800 810 820 pF1KSD IPSAIVLPNATHDYNTSFSNSNAHKAEKKLQNIDHPLTKSSSKRDHRRSVDSRNTLNDLL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 IPSAIVLPNATHDYNTSFSNSNAHKAEKKLQNIDHPLTKSSSKRDHRRSVDSRNTLNDLL 770 780 790 800 810 820 830 840 850 860 870 880 pF1KSD KHLNDPNSNPKAIMGDIQMAHQNLMLDPMGSMSEVPPKVPNREASLYSPPSTLPRNSPTK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 KHLNDPNSNPKAIMGDIQMAHQNLMLDPMGSMSEVPPKVPNREASLYSPPSTLPRNSPTK 830 840 850 860 870 880 890 900 910 920 930 940 pF1KSD RVDVPTTPGVPMTSLERQRGYHKNSSQRHSISAMPKNLNSPNGVLLSRQPSMNRGGYMPT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 RVDVPTTPGVPMTSLERQRGYHKNSSQRHSISAMPKNLNSPNGVLLSRQPSMNRGGYMPT 890 900 910 920 930 940 950 960 970 980 990 1000 pF1KSD PTGAKVDYIQGTPVSVHLQPSLSRQSSYTSNGTLPRTGLKRTPSLKPDVPPKPSFVPQTP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 PTGAKVDYIQGTPVSVHLQPSLSRQSSYTSNGTLPRTGLKRTPSLKPDVPPKPSFVPQTP 950 960 970 980 990 1000 1010 pF1KSD SVRPLNKYTY :::::::::: XP_016 SVRPLNKYTY 1010 >>XP_011520381 (OMIM: 609295) PREDICTED: semaphorin-6D i (1017 aa) initn: 6637 init1: 3742 opt: 6617 Z-score: 4507.3 bits: 845.5 E(85289): 0 Smith-Waterman score: 6708; 96.9% identity (96.9% similar) in 1030 aa overlap (1-1011:1-1017) 10 20 30 40 50 60 pF1KSD MRVFLLCAYILLLMVSQLRAVSFPEDDEPLNTVDYHYSRQYPVFRGRPSGNESQHRLDFQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_011 MRVFLLCAYILLLMVSQLRAVSFPEDDEPLNTVDYHYSRQYPVFRGRPSGNESQHRLDFQ 10 20 30 40 50 60 70 80 90 100 110 120 pF1KSD LMLKIRDTLYIAGRDQVYTVNLNEMPKTEVIPNKKLTWRSRQQDRENCAMKGKHKDECHN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_011 LMLKIRDTLYIAGRDQVYTVNLNEMPKTEVIPNKKLTWRSRQQDRENCAMKGKHKDECHN 70 80 90 100 110 120 130 140 150 160 170 180 pF1KSD FIKVFVPRNDEMVFVCGTNAFNPMCRYYRLSTLEYDGEEISGLARCPFDARQTNVALFAD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_011 FIKVFVPRNDEMVFVCGTNAFNPMCRYYRLSTLEYDGEEISGLARCPFDARQTNVALFAD 130 140 150 160 170 180 190 200 210 220 230 240 pF1KSD GKLYSATVADFLASDAVIYRSMGDGSALRTIKYDSKWIKEPHFLHAIEYGNYVYFFFREI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_011 GKLYSATVADFLASDAVIYRSMGDGSALRTIKYDSKWIKEPHFLHAIEYGNYVYFFFREI 190 200 210 220 230 240 250 260 270 280 290 300 pF1KSD AVEHNNLGKAVYSRVARICKNDMGGSQRVLEKHWTSFLKARLNCSVPGDSFFYFDVLQSI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_011 AVEHNNLGKAVYSRVARICKNDMGGSQRVLEKHWTSFLKARLNCSVPGDSFFYFDVLQSI 250 260 270 280 290 300 310 320 330 340 350 360 pF1KSD TDIIQINGIPTVVGVFTTQLNSIPGSAVCAFSMDDIEKVFKGRFKEQKTPDSVWTAVPED :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_011 TDIIQINGIPTVVGVFTTQLNSIPGSAVCAFSMDDIEKVFKGRFKEQKTPDSVWTAVPED 310 320 330 340 350 360 370 380 390 400 410 420 pF1KSD KVPKPRPGCCAKHGLAEAYKTSIDFPDETLSFIKSHPLMDSAVPPIADEPWFTKTRVRYR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_011 KVPKPRPGCCAKHGLAEAYKTSIDFPDETLSFIKSHPLMDSAVPPIADEPWFTKTRVRYR 370 380 390 400 410 420 430 440 450 460 470 480 pF1KSD LTAISVDHSAGPYQNYTVIFVGSEAGMVLKVLAKTSPFSLNDSVLLEEIEAYNHAKCSAE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_011 LTAISVDHSAGPYQNYTVIFVGSEAGMVLKVLAKTSPFSLNDSVLLEEIEAYNHAKCSAE 430 440 450 460 470 480 490 500 510 520 530 540 pF1KSD NEEDKKVISLQLDKDHHALYVAFSSCIIRIPLSRCERYGSCKKSCIASRDPYCGWLSQGS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_011 NEEDKKVISLQLDKDHHALYVAFSSCIIRIPLSRCERYGSCKKSCIASRDPYCGWLSQGS 490 500 510 520 530 540 550 560 570 580 pF1KSD CGRVTPGMLLLTEDFFAFHNHSAEGYEQDTEFGNTAHLGDCH------------------ ::::::::: :::::::::::::::::::: XP_011 CGRVTPGML-------------AEGYEQDTEFGNTAHLGDCHEILPTSTTPDYKIFGGPT 550 560 570 580 590 600 610 620 630 640 pF1KSD -GVRWEVQSGESNQMVHMNVLITCVFAAFVLGAFIAGVAVYCYRDMFVRKNRKIHKDAES ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_011 SGVRWEVQSGESNQMVHMNVLITCVFAAFVLGAFIAGVAVYCYRDMFVRKNRKIHKDAES 590 600 610 620 630 640 650 660 670 680 690 700 pF1KSD AQSCTDSSGSFAKLNGLFDSPVKEYQQNIDSPKLYSNLLTSRKELPPNGDTKSMVMDHRG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_011 AQSCTDSSGSFAKLNGLFDSPVKEYQQNIDSPKLYSNLLTSRKELPPNGDTKSMVMDHRG 650 660 670 680 690 700 710 720 730 740 750 760 pF1KSD QPPELAALPTPESTPVLHQKTLQAMKSHSEKAHGHGASRKETPQFFPSSPPPHSPLSHGH :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_011 QPPELAALPTPESTPVLHQKTLQAMKSHSEKAHGHGASRKETPQFFPSSPPPHSPLSHGH 710 720 730 740 750 760 770 780 790 800 810 820 pF1KSD IPSAIVLPNATHDYNTSFSNSNAHKAEKKLQNIDHPLTKSSSKRDHRRSVDSRNTLNDLL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_011 IPSAIVLPNATHDYNTSFSNSNAHKAEKKLQNIDHPLTKSSSKRDHRRSVDSRNTLNDLL 770 780 790 800 810 820 830 840 850 860 870 880 pF1KSD KHLNDPNSNPKAIMGDIQMAHQNLMLDPMGSMSEVPPKVPNREASLYSPPSTLPRNSPTK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_011 KHLNDPNSNPKAIMGDIQMAHQNLMLDPMGSMSEVPPKVPNREASLYSPPSTLPRNSPTK 830 840 850 860 870 880 890 900 910 920 930 940 pF1KSD RVDVPTTPGVPMTSLERQRGYHKNSSQRHSISAMPKNLNSPNGVLLSRQPSMNRGGYMPT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_011 RVDVPTTPGVPMTSLERQRGYHKNSSQRHSISAMPKNLNSPNGVLLSRQPSMNRGGYMPT 890 900 910 920 930 940 950 960 970 980 990 1000 pF1KSD PTGAKVDYIQGTPVSVHLQPSLSRQSSYTSNGTLPRTGLKRTPSLKPDVPPKPSFVPQTP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_011 PTGAKVDYIQGTPVSVHLQPSLSRQSSYTSNGTLPRTGLKRTPSLKPDVPPKPSFVPQTP 950 960 970 980 990 1000 1010 pF1KSD SVRPLNKYTY :::::::::: XP_011 SVRPLNKYTY 1010 >>NP_705870 (OMIM: 609295) semaphorin-6D isoform 3 precu (1017 aa) initn: 6637 init1: 3742 opt: 6617 Z-score: 4507.3 bits: 845.5 E(85289): 0 Smith-Waterman score: 6708; 96.9% identity (96.9% similar) in 1030 aa overlap (1-1011:1-1017) 10 20 30 40 50 60 pF1KSD MRVFLLCAYILLLMVSQLRAVSFPEDDEPLNTVDYHYSRQYPVFRGRPSGNESQHRLDFQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_705 MRVFLLCAYILLLMVSQLRAVSFPEDDEPLNTVDYHYSRQYPVFRGRPSGNESQHRLDFQ 10 20 30 40 50 60 70 80 90 100 110 120 pF1KSD LMLKIRDTLYIAGRDQVYTVNLNEMPKTEVIPNKKLTWRSRQQDRENCAMKGKHKDECHN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_705 LMLKIRDTLYIAGRDQVYTVNLNEMPKTEVIPNKKLTWRSRQQDRENCAMKGKHKDECHN 70 80 90 100 110 120 130 140 150 160 170 180 pF1KSD FIKVFVPRNDEMVFVCGTNAFNPMCRYYRLSTLEYDGEEISGLARCPFDARQTNVALFAD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_705 FIKVFVPRNDEMVFVCGTNAFNPMCRYYRLSTLEYDGEEISGLARCPFDARQTNVALFAD 130 140 150 160 170 180 190 200 210 220 230 240 pF1KSD GKLYSATVADFLASDAVIYRSMGDGSALRTIKYDSKWIKEPHFLHAIEYGNYVYFFFREI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_705 GKLYSATVADFLASDAVIYRSMGDGSALRTIKYDSKWIKEPHFLHAIEYGNYVYFFFREI 190 200 210 220 230 240 250 260 270 280 290 300 pF1KSD AVEHNNLGKAVYSRVARICKNDMGGSQRVLEKHWTSFLKARLNCSVPGDSFFYFDVLQSI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_705 AVEHNNLGKAVYSRVARICKNDMGGSQRVLEKHWTSFLKARLNCSVPGDSFFYFDVLQSI 250 260 270 280 290 300 310 320 330 340 350 360 pF1KSD TDIIQINGIPTVVGVFTTQLNSIPGSAVCAFSMDDIEKVFKGRFKEQKTPDSVWTAVPED :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_705 TDIIQINGIPTVVGVFTTQLNSIPGSAVCAFSMDDIEKVFKGRFKEQKTPDSVWTAVPED 310 320 330 340 350 360 370 380 390 400 410 420 pF1KSD KVPKPRPGCCAKHGLAEAYKTSIDFPDETLSFIKSHPLMDSAVPPIADEPWFTKTRVRYR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_705 KVPKPRPGCCAKHGLAEAYKTSIDFPDETLSFIKSHPLMDSAVPPIADEPWFTKTRVRYR 370 380 390 400 410 420 430 440 450 460 470 480 pF1KSD LTAISVDHSAGPYQNYTVIFVGSEAGMVLKVLAKTSPFSLNDSVLLEEIEAYNHAKCSAE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_705 LTAISVDHSAGPYQNYTVIFVGSEAGMVLKVLAKTSPFSLNDSVLLEEIEAYNHAKCSAE 430 440 450 460 470 480 490 500 510 520 530 540 pF1KSD NEEDKKVISLQLDKDHHALYVAFSSCIIRIPLSRCERYGSCKKSCIASRDPYCGWLSQGS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_705 NEEDKKVISLQLDKDHHALYVAFSSCIIRIPLSRCERYGSCKKSCIASRDPYCGWLSQGS 490 500 510 520 530 540 550 560 570 580 pF1KSD CGRVTPGMLLLTEDFFAFHNHSAEGYEQDTEFGNTAHLGDCH------------------ ::::::::: :::::::::::::::::::: NP_705 CGRVTPGML-------------AEGYEQDTEFGNTAHLGDCHEILPTSTTPDYKIFGGPT 550 560 570 580 590 600 610 620 630 640 pF1KSD -GVRWEVQSGESNQMVHMNVLITCVFAAFVLGAFIAGVAVYCYRDMFVRKNRKIHKDAES ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_705 SGVRWEVQSGESNQMVHMNVLITCVFAAFVLGAFIAGVAVYCYRDMFVRKNRKIHKDAES 590 600 610 620 630 640 650 660 670 680 690 700 pF1KSD AQSCTDSSGSFAKLNGLFDSPVKEYQQNIDSPKLYSNLLTSRKELPPNGDTKSMVMDHRG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_705 AQSCTDSSGSFAKLNGLFDSPVKEYQQNIDSPKLYSNLLTSRKELPPNGDTKSMVMDHRG 650 660 670 680 690 700 710 720 730 740 750 760 pF1KSD QPPELAALPTPESTPVLHQKTLQAMKSHSEKAHGHGASRKETPQFFPSSPPPHSPLSHGH :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_705 QPPELAALPTPESTPVLHQKTLQAMKSHSEKAHGHGASRKETPQFFPSSPPPHSPLSHGH 710 720 730 740 750 760 770 780 790 800 810 820 pF1KSD IPSAIVLPNATHDYNTSFSNSNAHKAEKKLQNIDHPLTKSSSKRDHRRSVDSRNTLNDLL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_705 IPSAIVLPNATHDYNTSFSNSNAHKAEKKLQNIDHPLTKSSSKRDHRRSVDSRNTLNDLL 770 780 790 800 810 820 830 840 850 860 870 880 pF1KSD KHLNDPNSNPKAIMGDIQMAHQNLMLDPMGSMSEVPPKVPNREASLYSPPSTLPRNSPTK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_705 KHLNDPNSNPKAIMGDIQMAHQNLMLDPMGSMSEVPPKVPNREASLYSPPSTLPRNSPTK 830 840 850 860 870 880 890 900 910 920 930 940 pF1KSD RVDVPTTPGVPMTSLERQRGYHKNSSQRHSISAMPKNLNSPNGVLLSRQPSMNRGGYMPT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_705 RVDVPTTPGVPMTSLERQRGYHKNSSQRHSISAMPKNLNSPNGVLLSRQPSMNRGGYMPT 890 900 910 920 930 940 950 960 970 980 990 1000 pF1KSD PTGAKVDYIQGTPVSVHLQPSLSRQSSYTSNGTLPRTGLKRTPSLKPDVPPKPSFVPQTP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_705 PTGAKVDYIQGTPVSVHLQPSLSRQSSYTSNGTLPRTGLKRTPSLKPDVPPKPSFVPQTP 950 960 970 980 990 1000 1010 pF1KSD SVRPLNKYTY :::::::::: NP_705 SVRPLNKYTY 1010 >>XP_016878107 (OMIM: 609295) PREDICTED: semaphorin-6D i (1067 aa) initn: 6868 init1: 3978 opt: 3984 Z-score: 2718.5 bits: 514.6 E(85289): 1.1e-144 Smith-Waterman score: 6585; 94.6% identity (94.6% similar) in 1043 aa overlap (1-987:1-1043) 10 20 30 40 50 60 pF1KSD MRVFLLCAYILLLMVSQLRAVSFPEDDEPLNTVDYHYSRQYPVFRGRPSGNESQHRLDFQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 MRVFLLCAYILLLMVSQLRAVSFPEDDEPLNTVDYHYSRQYPVFRGRPSGNESQHRLDFQ 10 20 30 40 50 60 70 80 90 100 110 120 pF1KSD LMLKIRDTLYIAGRDQVYTVNLNEMPKTEVIPNKKLTWRSRQQDRENCAMKGKHKDECHN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 LMLKIRDTLYIAGRDQVYTVNLNEMPKTEVIPNKKLTWRSRQQDRENCAMKGKHKDECHN 70 80 90 100 110 120 130 140 150 160 170 180 pF1KSD FIKVFVPRNDEMVFVCGTNAFNPMCRYYRLSTLEYDGEEISGLARCPFDARQTNVALFAD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 FIKVFVPRNDEMVFVCGTNAFNPMCRYYRLSTLEYDGEEISGLARCPFDARQTNVALFAD 130 140 150 160 170 180 190 200 210 220 230 240 pF1KSD GKLYSATVADFLASDAVIYRSMGDGSALRTIKYDSKWIKEPHFLHAIEYGNYVYFFFREI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 GKLYSATVADFLASDAVIYRSMGDGSALRTIKYDSKWIKEPHFLHAIEYGNYVYFFFREI 190 200 210 220 230 240 250 260 270 280 290 300 pF1KSD AVEHNNLGKAVYSRVARICKNDMGGSQRVLEKHWTSFLKARLNCSVPGDSFFYFDVLQSI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 AVEHNNLGKAVYSRVARICKNDMGGSQRVLEKHWTSFLKARLNCSVPGDSFFYFDVLQSI 250 260 270 280 290 300 310 320 330 340 350 360 pF1KSD TDIIQINGIPTVVGVFTTQLNSIPGSAVCAFSMDDIEKVFKGRFKEQKTPDSVWTAVPED :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 TDIIQINGIPTVVGVFTTQLNSIPGSAVCAFSMDDIEKVFKGRFKEQKTPDSVWTAVPED 310 320 330 340 350 360 370 380 390 400 410 420 pF1KSD KVPKPRPGCCAKHGLAEAYKTSIDFPDETLSFIKSHPLMDSAVPPIADEPWFTKTRVRYR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 KVPKPRPGCCAKHGLAEAYKTSIDFPDETLSFIKSHPLMDSAVPPIADEPWFTKTRVRYR 370 380 390 400 410 420 430 440 450 460 470 480 pF1KSD LTAISVDHSAGPYQNYTVIFVGSEAGMVLKVLAKTSPFSLNDSVLLEEIEAYNHAKCSAE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 LTAISVDHSAGPYQNYTVIFVGSEAGMVLKVLAKTSPFSLNDSVLLEEIEAYNHAKCSAE 430 440 450 460 470 480 490 500 510 520 530 540 pF1KSD NEEDKKVISLQLDKDHHALYVAFSSCIIRIPLSRCERYGSCKKSCIASRDPYCGWLSQGS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 NEEDKKVISLQLDKDHHALYVAFSSCIIRIPLSRCERYGSCKKSCIASRDPYCGWLSQGS 490 500 510 520 530 540 550 560 570 580 pF1KSD CGRVTPGMLLLTEDFFAFHNHSAEGYEQDTEFGNTAHLGDCH------------------ :::::::::::::::::::::::::::::::::::::::::: XP_016 CGRVTPGMLLLTEDFFAFHNHSAEGYEQDTEFGNTAHLGDCHDMEVSSSSVTTMASIPEI 550 560 570 580 590 600 590 600 pF1KSD --------------------------------------GVRWEVQSGESNQMVHMNVLIT :::::::::::::::::::::: XP_016 TPKVIDTWRPKLTSSRKFVVQDDPNTSDFTDPLSGIPKGVRWEVQSGESNQMVHMNVLIT 610 620 630 640 650 660 610 620 630 640 650 660 pF1KSD CVFAAFVLGAFIAGVAVYCYRDMFVRKNRKIHKDAESAQSCTDSSGSFAKLNGLFDSPVK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 CVFAAFVLGAFIAGVAVYCYRDMFVRKNRKIHKDAESAQSCTDSSGSFAKLNGLFDSPVK 670 680 690 700 710 720 670 680 690 700 710 720 pF1KSD EYQQNIDSPKLYSNLLTSRKELPPNGDTKSMVMDHRGQPPELAALPTPESTPVLHQKTLQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 EYQQNIDSPKLYSNLLTSRKELPPNGDTKSMVMDHRGQPPELAALPTPESTPVLHQKTLQ 730 740 750 760 770 780 730 740 750 760 770 780 pF1KSD AMKSHSEKAHGHGASRKETPQFFPSSPPPHSPLSHGHIPSAIVLPNATHDYNTSFSNSNA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 AMKSHSEKAHGHGASRKETPQFFPSSPPPHSPLSHGHIPSAIVLPNATHDYNTSFSNSNA 790 800 810 820 830 840 790 800 810 820 830 840 pF1KSD HKAEKKLQNIDHPLTKSSSKRDHRRSVDSRNTLNDLLKHLNDPNSNPKAIMGDIQMAHQN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 HKAEKKLQNIDHPLTKSSSKRDHRRSVDSRNTLNDLLKHLNDPNSNPKAIMGDIQMAHQN 850 860 870 880 890 900 850 860 870 880 890 900 pF1KSD LMLDPMGSMSEVPPKVPNREASLYSPPSTLPRNSPTKRVDVPTTPGVPMTSLERQRGYHK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 LMLDPMGSMSEVPPKVPNREASLYSPPSTLPRNSPTKRVDVPTTPGVPMTSLERQRGYHK 910 920 930 940 950 960 910 920 930 940 950 960 pF1KSD NSSQRHSISAMPKNLNSPNGVLLSRQPSMNRGGYMPTPTGAKVDYIQGTPVSVHLQPSLS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 NSSQRHSISAMPKNLNSPNGVLLSRQPSMNRGGYMPTPTGAKVDYIQGTPVSVHLQPSLS 970 980 990 1000 1010 1020 970 980 990 1000 1010 pF1KSD RQSSYTSNGTLPRTGLKRTPSLKPDVPPKPSFVPQTPSVRPLNKYTY ::::::::::::::::::::::: XP_016 RQSSYTSNGTLPRTGLKRTPSLKPDVPPKPSFVPQTPSVRPLNKYTY 1030 1040 1050 1060 >>XP_011520378 (OMIM: 609295) PREDICTED: semaphorin-6D i (1067 aa) initn: 6868 init1: 3978 opt: 3984 Z-score: 2718.5 bits: 514.6 E(85289): 1.1e-144 Smith-Waterman score: 6585; 94.6% identity (94.6% similar) in 1043 aa overlap (1-987:1-1043) 10 20 30 40 50 60 pF1KSD MRVFLLCAYILLLMVSQLRAVSFPEDDEPLNTVDYHYSRQYPVFRGRPSGNESQHRLDFQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_011 MRVFLLCAYILLLMVSQLRAVSFPEDDEPLNTVDYHYSRQYPVFRGRPSGNESQHRLDFQ 10 20 30 40 50 60 70 80 90 100 110 120 pF1KSD LMLKIRDTLYIAGRDQVYTVNLNEMPKTEVIPNKKLTWRSRQQDRENCAMKGKHKDECHN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_011 LMLKIRDTLYIAGRDQVYTVNLNEMPKTEVIPNKKLTWRSRQQDRENCAMKGKHKDECHN 70 80 90 100 110 120 130 140 150 160 170 180 pF1KSD FIKVFVPRNDEMVFVCGTNAFNPMCRYYRLSTLEYDGEEISGLARCPFDARQTNVALFAD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_011 FIKVFVPRNDEMVFVCGTNAFNPMCRYYRLSTLEYDGEEISGLARCPFDARQTNVALFAD 130 140 150 160 170 180 190 200 210 220 230 240 pF1KSD GKLYSATVADFLASDAVIYRSMGDGSALRTIKYDSKWIKEPHFLHAIEYGNYVYFFFREI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_011 GKLYSATVADFLASDAVIYRSMGDGSALRTIKYDSKWIKEPHFLHAIEYGNYVYFFFREI 190 200 210 220 230 240 250 260 270 280 290 300 pF1KSD AVEHNNLGKAVYSRVARICKNDMGGSQRVLEKHWTSFLKARLNCSVPGDSFFYFDVLQSI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_011 AVEHNNLGKAVYSRVARICKNDMGGSQRVLEKHWTSFLKARLNCSVPGDSFFYFDVLQSI 250 260 270 280 290 300 310 320 330 340 350 360 pF1KSD TDIIQINGIPTVVGVFTTQLNSIPGSAVCAFSMDDIEKVFKGRFKEQKTPDSVWTAVPED :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_011 TDIIQINGIPTVVGVFTTQLNSIPGSAVCAFSMDDIEKVFKGRFKEQKTPDSVWTAVPED 310 320 330 340 350 360 370 380 390 400 410 420 pF1KSD KVPKPRPGCCAKHGLAEAYKTSIDFPDETLSFIKSHPLMDSAVPPIADEPWFTKTRVRYR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_011 KVPKPRPGCCAKHGLAEAYKTSIDFPDETLSFIKSHPLMDSAVPPIADEPWFTKTRVRYR 370 380 390 400 410 420 430 440 450 460 470 480 pF1KSD LTAISVDHSAGPYQNYTVIFVGSEAGMVLKVLAKTSPFSLNDSVLLEEIEAYNHAKCSAE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_011 LTAISVDHSAGPYQNYTVIFVGSEAGMVLKVLAKTSPFSLNDSVLLEEIEAYNHAKCSAE 430 440 450 460 470 480 490 500 510 520 530 540 pF1KSD NEEDKKVISLQLDKDHHALYVAFSSCIIRIPLSRCERYGSCKKSCIASRDPYCGWLSQGS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_011 NEEDKKVISLQLDKDHHALYVAFSSCIIRIPLSRCERYGSCKKSCIASRDPYCGWLSQGS 490 500 510 520 530 540 550 560 570 580 pF1KSD CGRVTPGMLLLTEDFFAFHNHSAEGYEQDTEFGNTAHLGDCH------------------ :::::::::::::::::::::::::::::::::::::::::: XP_011 CGRVTPGMLLLTEDFFAFHNHSAEGYEQDTEFGNTAHLGDCHDMEVSSSSVTTMASIPEI 550 560 570 580 590 600 590 600 pF1KSD --------------------------------------GVRWEVQSGESNQMVHMNVLIT :::::::::::::::::::::: XP_011 TPKVIDTWRPKLTSSRKFVVQDDPNTSDFTDPLSGIPKGVRWEVQSGESNQMVHMNVLIT 610 620 630 640 650 660 610 620 630 640 650 660 pF1KSD CVFAAFVLGAFIAGVAVYCYRDMFVRKNRKIHKDAESAQSCTDSSGSFAKLNGLFDSPVK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_011 CVFAAFVLGAFIAGVAVYCYRDMFVRKNRKIHKDAESAQSCTDSSGSFAKLNGLFDSPVK 670 680 690 700 710 720 670 680 690 700 710 720 pF1KSD EYQQNIDSPKLYSNLLTSRKELPPNGDTKSMVMDHRGQPPELAALPTPESTPVLHQKTLQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_011 EYQQNIDSPKLYSNLLTSRKELPPNGDTKSMVMDHRGQPPELAALPTPESTPVLHQKTLQ 730 740 750 760 770 780 730 740 750 760 770 780 pF1KSD AMKSHSEKAHGHGASRKETPQFFPSSPPPHSPLSHGHIPSAIVLPNATHDYNTSFSNSNA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_011 AMKSHSEKAHGHGASRKETPQFFPSSPPPHSPLSHGHIPSAIVLPNATHDYNTSFSNSNA 790 800 810 820 830 840 790 800 810 820 830 840 pF1KSD HKAEKKLQNIDHPLTKSSSKRDHRRSVDSRNTLNDLLKHLNDPNSNPKAIMGDIQMAHQN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_011 HKAEKKLQNIDHPLTKSSSKRDHRRSVDSRNTLNDLLKHLNDPNSNPKAIMGDIQMAHQN 850 860 870 880 890 900 850 860 870 880 890 900 pF1KSD LMLDPMGSMSEVPPKVPNREASLYSPPSTLPRNSPTKRVDVPTTPGVPMTSLERQRGYHK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_011 LMLDPMGSMSEVPPKVPNREASLYSPPSTLPRNSPTKRVDVPTTPGVPMTSLERQRGYHK 910 920 930 940 950 960 910 920 930 940 950 960 pF1KSD NSSQRHSISAMPKNLNSPNGVLLSRQPSMNRGGYMPTPTGAKVDYIQGTPVSVHLQPSLS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_011 NSSQRHSISAMPKNLNSPNGVLLSRQPSMNRGGYMPTPTGAKVDYIQGTPVSVHLQPSLS 970 980 990 1000 1010 1020 970 980 990 1000 1010 pF1KSD RQSSYTSNGTLPRTGLKRTPSLKPDVPPKPSFVPQTPSVRPLNKYTY ::::::::::::::::::::::: XP_011 RQSSYTSNGTLPRTGLKRTPSLKPDVPPKPSFVPQTPSVRPLNKYTY 1030 1040 1050 1060 >>XP_016878108 (OMIM: 609295) PREDICTED: semaphorin-6D i (1030 aa) initn: 3979 init1: 3979 opt: 3979 Z-score: 2715.3 bits: 514.0 E(85289): 1.7e-144 Smith-Waterman score: 6834; 98.2% identity (98.2% similar) in 1030 aa overlap (1-1011:1-1030) 10 20 30 40 50 60 pF1KSD MRVFLLCAYILLLMVSQLRAVSFPEDDEPLNTVDYHYSRQYPVFRGRPSGNESQHRLDFQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 MRVFLLCAYILLLMVSQLRAVSFPEDDEPLNTVDYHYSRQYPVFRGRPSGNESQHRLDFQ 10 20 30 40 50 60 70 80 90 100 110 120 pF1KSD LMLKIRDTLYIAGRDQVYTVNLNEMPKTEVIPNKKLTWRSRQQDRENCAMKGKHKDECHN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 LMLKIRDTLYIAGRDQVYTVNLNEMPKTEVIPNKKLTWRSRQQDRENCAMKGKHKDECHN 70 80 90 100 110 120 130 140 150 160 170 180 pF1KSD FIKVFVPRNDEMVFVCGTNAFNPMCRYYRLSTLEYDGEEISGLARCPFDARQTNVALFAD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 FIKVFVPRNDEMVFVCGTNAFNPMCRYYRLSTLEYDGEEISGLARCPFDARQTNVALFAD 130 140 150 160 170 180 190 200 210 220 230 240 pF1KSD GKLYSATVADFLASDAVIYRSMGDGSALRTIKYDSKWIKEPHFLHAIEYGNYVYFFFREI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 GKLYSATVADFLASDAVIYRSMGDGSALRTIKYDSKWIKEPHFLHAIEYGNYVYFFFREI 190 200 210 220 230 240 250 260 270 280 290 300 pF1KSD AVEHNNLGKAVYSRVARICKNDMGGSQRVLEKHWTSFLKARLNCSVPGDSFFYFDVLQSI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 AVEHNNLGKAVYSRVARICKNDMGGSQRVLEKHWTSFLKARLNCSVPGDSFFYFDVLQSI 250 260 270 280 290 300 310 320 330 340 350 360 pF1KSD TDIIQINGIPTVVGVFTTQLNSIPGSAVCAFSMDDIEKVFKGRFKEQKTPDSVWTAVPED :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 TDIIQINGIPTVVGVFTTQLNSIPGSAVCAFSMDDIEKVFKGRFKEQKTPDSVWTAVPED 310 320 330 340 350 360 370 380 390 400 410 420 pF1KSD KVPKPRPGCCAKHGLAEAYKTSIDFPDETLSFIKSHPLMDSAVPPIADEPWFTKTRVRYR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 KVPKPRPGCCAKHGLAEAYKTSIDFPDETLSFIKSHPLMDSAVPPIADEPWFTKTRVRYR 370 380 390 400 410 420 430 440 450 460 470 480 pF1KSD LTAISVDHSAGPYQNYTVIFVGSEAGMVLKVLAKTSPFSLNDSVLLEEIEAYNHAKCSAE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 LTAISVDHSAGPYQNYTVIFVGSEAGMVLKVLAKTSPFSLNDSVLLEEIEAYNHAKCSAE 430 440 450 460 470 480 490 500 510 520 530 540 pF1KSD NEEDKKVISLQLDKDHHALYVAFSSCIIRIPLSRCERYGSCKKSCIASRDPYCGWLSQGS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 NEEDKKVISLQLDKDHHALYVAFSSCIIRIPLSRCERYGSCKKSCIASRDPYCGWLSQGS 490 500 510 520 530 540 550 560 570 580 pF1KSD CGRVTPGMLLLTEDFFAFHNHSAEGYEQDTEFGNTAHLGDCH------------------ :::::::::::::::::::::::::::::::::::::::::: XP_016 CGRVTPGMLLLTEDFFAFHNHSAEGYEQDTEFGNTAHLGDCHEILPTSTTPDYKIFGGPT 550 560 570 580 590 600 590 600 610 620 630 640 pF1KSD -GVRWEVQSGESNQMVHMNVLITCVFAAFVLGAFIAGVAVYCYRDMFVRKNRKIHKDAES ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 SGVRWEVQSGESNQMVHMNVLITCVFAAFVLGAFIAGVAVYCYRDMFVRKNRKIHKDAES 610 620 630 640 650 660 650 660 670 680 690 700 pF1KSD AQSCTDSSGSFAKLNGLFDSPVKEYQQNIDSPKLYSNLLTSRKELPPNGDTKSMVMDHRG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 AQSCTDSSGSFAKLNGLFDSPVKEYQQNIDSPKLYSNLLTSRKELPPNGDTKSMVMDHRG 670 680 690 700 710 720 710 720 730 740 750 760 pF1KSD QPPELAALPTPESTPVLHQKTLQAMKSHSEKAHGHGASRKETPQFFPSSPPPHSPLSHGH :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 QPPELAALPTPESTPVLHQKTLQAMKSHSEKAHGHGASRKETPQFFPSSPPPHSPLSHGH 730 740 750 760 770 780 770 780 790 800 810 820 pF1KSD IPSAIVLPNATHDYNTSFSNSNAHKAEKKLQNIDHPLTKSSSKRDHRRSVDSRNTLNDLL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 IPSAIVLPNATHDYNTSFSNSNAHKAEKKLQNIDHPLTKSSSKRDHRRSVDSRNTLNDLL 790 800 810 820 830 840 830 840 850 860 870 880 pF1KSD KHLNDPNSNPKAIMGDIQMAHQNLMLDPMGSMSEVPPKVPNREASLYSPPSTLPRNSPTK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 KHLNDPNSNPKAIMGDIQMAHQNLMLDPMGSMSEVPPKVPNREASLYSPPSTLPRNSPTK 850 860 870 880 890 900 890 900 910 920 930 940 pF1KSD RVDVPTTPGVPMTSLERQRGYHKNSSQRHSISAMPKNLNSPNGVLLSRQPSMNRGGYMPT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 RVDVPTTPGVPMTSLERQRGYHKNSSQRHSISAMPKNLNSPNGVLLSRQPSMNRGGYMPT 910 920 930 940 950 960 950 960 970 980 990 1000 pF1KSD PTGAKVDYIQGTPVSVHLQPSLSRQSSYTSNGTLPRTGLKRTPSLKPDVPPKPSFVPQTP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 PTGAKVDYIQGTPVSVHLQPSLSRQSSYTSNGTLPRTGLKRTPSLKPDVPPKPSFVPQTP 970 980 990 1000 1010 1020 1010 pF1KSD SVRPLNKYTY :::::::::: XP_016 SVRPLNKYTY 1030 >>XP_011520380 (OMIM: 609295) PREDICTED: semaphorin-6D i (1030 aa) initn: 3979 init1: 3979 opt: 3979 Z-score: 2715.3 bits: 514.0 E(85289): 1.7e-144 Smith-Waterman score: 6834; 98.2% identity (98.2% similar) in 1030 aa overlap (1-1011:1-1030) 10 20 30 40 50 60 pF1KSD MRVFLLCAYILLLMVSQLRAVSFPEDDEPLNTVDYHYSRQYPVFRGRPSGNESQHRLDFQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_011 MRVFLLCAYILLLMVSQLRAVSFPEDDEPLNTVDYHYSRQYPVFRGRPSGNESQHRLDFQ 10 20 30 40 50 60 70 80 90 100 110 120 pF1KSD LMLKIRDTLYIAGRDQVYTVNLNEMPKTEVIPNKKLTWRSRQQDRENCAMKGKHKDECHN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_011 LMLKIRDTLYIAGRDQVYTVNLNEMPKTEVIPNKKLTWRSRQQDRENCAMKGKHKDECHN 70 80 90 100 110 120 130 140 150 160 170 180 pF1KSD FIKVFVPRNDEMVFVCGTNAFNPMCRYYRLSTLEYDGEEISGLARCPFDARQTNVALFAD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_011 FIKVFVPRNDEMVFVCGTNAFNPMCRYYRLSTLEYDGEEISGLARCPFDARQTNVALFAD 130 140 150 160 170 180 190 200 210 220 230 240 pF1KSD GKLYSATVADFLASDAVIYRSMGDGSALRTIKYDSKWIKEPHFLHAIEYGNYVYFFFREI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_011 GKLYSATVADFLASDAVIYRSMGDGSALRTIKYDSKWIKEPHFLHAIEYGNYVYFFFREI 190 200 210 220 230 240 250 260 270 280 290 300 pF1KSD AVEHNNLGKAVYSRVARICKNDMGGSQRVLEKHWTSFLKARLNCSVPGDSFFYFDVLQSI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_011 AVEHNNLGKAVYSRVARICKNDMGGSQRVLEKHWTSFLKARLNCSVPGDSFFYFDVLQSI 250 260 270 280 290 300 310 320 330 340 350 360 pF1KSD TDIIQINGIPTVVGVFTTQLNSIPGSAVCAFSMDDIEKVFKGRFKEQKTPDSVWTAVPED :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_011 TDIIQINGIPTVVGVFTTQLNSIPGSAVCAFSMDDIEKVFKGRFKEQKTPDSVWTAVPED 310 320 330 340 350 360 370 380 390 400 410 420 pF1KSD KVPKPRPGCCAKHGLAEAYKTSIDFPDETLSFIKSHPLMDSAVPPIADEPWFTKTRVRYR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_011 KVPKPRPGCCAKHGLAEAYKTSIDFPDETLSFIKSHPLMDSAVPPIADEPWFTKTRVRYR 370 380 390 400 410 420 430 440 450 460 470 480 pF1KSD LTAISVDHSAGPYQNYTVIFVGSEAGMVLKVLAKTSPFSLNDSVLLEEIEAYNHAKCSAE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_011 LTAISVDHSAGPYQNYTVIFVGSEAGMVLKVLAKTSPFSLNDSVLLEEIEAYNHAKCSAE 430 440 450 460 470 480 490 500 510 520 530 540 pF1KSD NEEDKKVISLQLDKDHHALYVAFSSCIIRIPLSRCERYGSCKKSCIASRDPYCGWLSQGS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_011 NEEDKKVISLQLDKDHHALYVAFSSCIIRIPLSRCERYGSCKKSCIASRDPYCGWLSQGS 490 500 510 520 530 540 550 560 570 580 pF1KSD CGRVTPGMLLLTEDFFAFHNHSAEGYEQDTEFGNTAHLGDCH------------------ :::::::::::::::::::::::::::::::::::::::::: XP_011 CGRVTPGMLLLTEDFFAFHNHSAEGYEQDTEFGNTAHLGDCHEILPTSTTPDYKIFGGPT 550 560 570 580 590 600 590 600 610 620 630 640 pF1KSD -GVRWEVQSGESNQMVHMNVLITCVFAAFVLGAFIAGVAVYCYRDMFVRKNRKIHKDAES ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_011 SGVRWEVQSGESNQMVHMNVLITCVFAAFVLGAFIAGVAVYCYRDMFVRKNRKIHKDAES 610 620 630 640 650 660 650 660 670 680 690 700 pF1KSD AQSCTDSSGSFAKLNGLFDSPVKEYQQNIDSPKLYSNLLTSRKELPPNGDTKSMVMDHRG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_011 AQSCTDSSGSFAKLNGLFDSPVKEYQQNIDSPKLYSNLLTSRKELPPNGDTKSMVMDHRG 670 680 690 700 710 720 710 720 730 740 750 760 pF1KSD QPPELAALPTPESTPVLHQKTLQAMKSHSEKAHGHGASRKETPQFFPSSPPPHSPLSHGH :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_011 QPPELAALPTPESTPVLHQKTLQAMKSHSEKAHGHGASRKETPQFFPSSPPPHSPLSHGH 730 740 750 760 770 780 770 780 790 800 810 820 pF1KSD IPSAIVLPNATHDYNTSFSNSNAHKAEKKLQNIDHPLTKSSSKRDHRRSVDSRNTLNDLL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_011 IPSAIVLPNATHDYNTSFSNSNAHKAEKKLQNIDHPLTKSSSKRDHRRSVDSRNTLNDLL 790 800 810 820 830 840 830 840 850 860 870 880 pF1KSD KHLNDPNSNPKAIMGDIQMAHQNLMLDPMGSMSEVPPKVPNREASLYSPPSTLPRNSPTK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_011 KHLNDPNSNPKAIMGDIQMAHQNLMLDPMGSMSEVPPKVPNREASLYSPPSTLPRNSPTK 850 860 870 880 890 900 890 900 910 920 930 940 pF1KSD RVDVPTTPGVPMTSLERQRGYHKNSSQRHSISAMPKNLNSPNGVLLSRQPSMNRGGYMPT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_011 RVDVPTTPGVPMTSLERQRGYHKNSSQRHSISAMPKNLNSPNGVLLSRQPSMNRGGYMPT 910 920 930 940 950 960 950 960 970 980 990 1000 pF1KSD PTGAKVDYIQGTPVSVHLQPSLSRQSSYTSNGTLPRTGLKRTPSLKPDVPPKPSFVPQTP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_011 PTGAKVDYIQGTPVSVHLQPSLSRQSSYTSNGTLPRTGLKRTPSLKPDVPPKPSFVPQTP 970 980 990 1000 1010 1020 1010 pF1KSD SVRPLNKYTY :::::::::: XP_011 SVRPLNKYTY 1030 1011 residues in 1 query sequences 60827320 residues in 85289 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Thu Nov 3 06:26:26 2016 done: Thu Nov 3 06:26:28 2016 Total Scan time: 11.560 Total Display time: 0.490 Function used was FASTA [36.3.4 Apr, 2011]