Result of FASTA (ccds) for
pFN21AA0761
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KA0761, 551 aa
1>>>pF1KA0761 551 - 551 aa - 551 aa
Library: human.CCDS.faa
18511270 residues in 32554 sequences
Statistics: Expectation_n fit: rho(ln(x))= 7.5892+/-0.000869; mu= 8.6155+/- 0.052
mean_var=132.0927+/-25.937, 0's: 0 Z-trim(109.8): 13 B-trim: 0 in 0/55
Lambda= 0.111592
statistics sampled from 11171 (11180) to 11171 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.711), E-opt: 0.2 (0.343), width: 16
Scan time: 3.580
The best scores are: opt bits E(32554)
CCDS41362.1 CLCC1 gene_id:23155|Hs108|chr1 ( 551) 3785 620.8 1.3e-177
CCDS793.1 CLCC1 gene_id:23155|Hs108|chr1 ( 501) 2689 444.4 1.5e-124
CCDS60215.1 CLCC1 gene_id:23155|Hs108|chr1 ( 430) 2168 360.5 2.4e-99
CCDS60214.1 CLCC1 gene_id:23155|Hs108|chr1 ( 366) 1698 284.8 1.2e-76
>>CCDS41362.1 CLCC1 gene_id:23155|Hs108|chr1 (551 aa)
initn: 3785 init1: 3785 opt: 3785 Z-score: 3302.4 bits: 620.8 E(32554): 1.3e-177
Smith-Waterman score: 3785; 100.0% identity (100.0% similar) in 551 aa overlap (1-551:1-551)
10 20 30 40 50 60
pF1KA0 MLCSLLLCECLLLVAGYAHDDDWIDPTDMLNYDAASGTMRKSQAKYGISGEKDVSPDLSC
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS41 MLCSLLLCECLLLVAGYAHDDDWIDPTDMLNYDAASGTMRKSQAKYGISGEKDVSPDLSC
10 20 30 40 50 60
70 80 90 100 110 120
pF1KA0 ADEISECYHKLDSLTYKIDECEKKKREDYESQSNPVFRRYLNKILIEAGKLGLPDENKGD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS41 ADEISECYHKLDSLTYKIDECEKKKREDYESQSNPVFRRYLNKILIEAGKLGLPDENKGD
70 80 90 100 110 120
130 140 150 160 170 180
pF1KA0 MHYDAEIILKRETLLEIQKFLNGEDWKPGALDDALSDILINFKFHDFETWKWRFEDSFGV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS41 MHYDAEIILKRETLLEIQKFLNGEDWKPGALDDALSDILINFKFHDFETWKWRFEDSFGV
130 140 150 160 170 180
190 200 210 220 230 240
pF1KA0 DPYNVLMVLLCLLCIVVLVATELWTYVRWYTQLRRVLIISFLFSLGWNWMYLYKLAFAQH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS41 DPYNVLMVLLCLLCIVVLVATELWTYVRWYTQLRRVLIISFLFSLGWNWMYLYKLAFAQH
190 200 210 220 230 240
250 260 270 280 290 300
pF1KA0 QAEVAKMEPLNNVCAKKMDWTGSIWEWFRSSWTYKDDPCQKYYELLLVNPIWLVPPTKAL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS41 QAEVAKMEPLNNVCAKKMDWTGSIWEWFRSSWTYKDDPCQKYYELLLVNPIWLVPPTKAL
250 260 270 280 290 300
310 320 330 340 350 360
pF1KA0 AVTFTTFVTEPLKHIGKGTGEFIKALMKEIPALLHLPVLIIMALAILSFCYGAGKSVHVL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS41 AVTFTTFVTEPLKHIGKGTGEFIKALMKEIPALLHLPVLIIMALAILSFCYGAGKSVHVL
310 320 330 340 350 360
370 380 390 400 410 420
pF1KA0 RHIGGPESEPPQALRPRDRRRQEEIDYRPDGGAGDADFHYRGQMGPTEQGPYAKTYEGRR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS41 RHIGGPESEPPQALRPRDRRRQEEIDYRPDGGAGDADFHYRGQMGPTEQGPYAKTYEGRR
370 380 390 400 410 420
430 440 450 460 470 480
pF1KA0 EILRERDVDLRFQTGNKSPEVLRAFDVPDAEAREHPTVVPSHKSPVLDTKPKETGGILGE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS41 EILRERDVDLRFQTGNKSPEVLRAFDVPDAEAREHPTVVPSHKSPVLDTKPKETGGILGE
430 440 450 460 470 480
490 500 510 520 530 540
pF1KA0 GTPKESSTESSQSAKPVSGQDTSGNTEGSPAAEKAQLKSEAAGSPDQGSTYSPARGVAGP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS41 GTPKESSTESSQSAKPVSGQDTSGNTEGSPAAEKAQLKSEAAGSPDQGSTYSPARGVAGP
490 500 510 520 530 540
550
pF1KA0 RGQDPVSSPCG
:::::::::::
CCDS41 RGQDPVSSPCG
550
>>CCDS793.1 CLCC1 gene_id:23155|Hs108|chr1 (501 aa)
initn: 3435 init1: 2680 opt: 2689 Z-score: 2349.4 bits: 444.4 E(32554): 1.5e-124
Smith-Waterman score: 3339; 90.9% identity (90.9% similar) in 551 aa overlap (1-551:1-501)
10 20 30 40 50 60
pF1KA0 MLCSLLLCECLLLVAGYAHDDDWIDPTDMLNYDAASGTMRKSQAKYGISGEKDVSPDLSC
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS79 MLCSLLLCECLLLVAGYAHDDDWIDPTDMLNYDAASGTMRKSQAKYGISGEKDVSPDLSC
10 20 30 40 50 60
70 80 90 100 110 120
pF1KA0 ADEISECYHKLDSLTYKIDECEKKKREDYESQSNPVFRRYLNKILIEAGKLGLPDENKGD
:::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS79 ADEISECYHKLDSLTYKIDECEKKKREDYESQSNPVFRRYLNKILIEAGKLGL-------
70 80 90 100 110
130 140 150 160 170 180
pF1KA0 MHYDAEIILKRETLLEIQKFLNGEDWKPGALDDALSDILINFKFHDFETWKWRFEDSFGV
:::::::::::::::::
CCDS79 -------------------------------------------FHDFETWKWRFEDSFGV
120 130
190 200 210 220 230 240
pF1KA0 DPYNVLMVLLCLLCIVVLVATELWTYVRWYTQLRRVLIISFLFSLGWNWMYLYKLAFAQH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS79 DPYNVLMVLLCLLCIVVLVATELWTYVRWYTQLRRVLIISFLFSLGWNWMYLYKLAFAQH
140 150 160 170 180 190
250 260 270 280 290 300
pF1KA0 QAEVAKMEPLNNVCAKKMDWTGSIWEWFRSSWTYKDDPCQKYYELLLVNPIWLVPPTKAL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS79 QAEVAKMEPLNNVCAKKMDWTGSIWEWFRSSWTYKDDPCQKYYELLLVNPIWLVPPTKAL
200 210 220 230 240 250
310 320 330 340 350 360
pF1KA0 AVTFTTFVTEPLKHIGKGTGEFIKALMKEIPALLHLPVLIIMALAILSFCYGAGKSVHVL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS79 AVTFTTFVTEPLKHIGKGTGEFIKALMKEIPALLHLPVLIIMALAILSFCYGAGKSVHVL
260 270 280 290 300 310
370 380 390 400 410 420
pF1KA0 RHIGGPESEPPQALRPRDRRRQEEIDYRPDGGAGDADFHYRGQMGPTEQGPYAKTYEGRR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS79 RHIGGPESEPPQALRPRDRRRQEEIDYRPDGGAGDADFHYRGQMGPTEQGPYAKTYEGRR
320 330 340 350 360 370
430 440 450 460 470 480
pF1KA0 EILRERDVDLRFQTGNKSPEVLRAFDVPDAEAREHPTVVPSHKSPVLDTKPKETGGILGE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS79 EILRERDVDLRFQTGNKSPEVLRAFDVPDAEAREHPTVVPSHKSPVLDTKPKETGGILGE
380 390 400 410 420 430
490 500 510 520 530 540
pF1KA0 GTPKESSTESSQSAKPVSGQDTSGNTEGSPAAEKAQLKSEAAGSPDQGSTYSPARGVAGP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS79 GTPKESSTESSQSAKPVSGQDTSGNTEGSPAAEKAQLKSEAAGSPDQGSTYSPARGVAGP
440 450 460 470 480 490
550
pF1KA0 RGQDPVSSPCG
:::::::::::
CCDS79 RGQDPVSSPCG
500
>>CCDS60215.1 CLCC1 gene_id:23155|Hs108|chr1 (430 aa)
initn: 2923 init1: 2168 opt: 2168 Z-score: 1897.1 bits: 360.5 E(32554): 2.4e-99
Smith-Waterman score: 2685; 78.0% identity (78.0% similar) in 551 aa overlap (1-551:1-430)
10 20 30 40 50 60
pF1KA0 MLCSLLLCECLLLVAGYAHDDDWIDPTDMLNYDAASGTMRKSQAKYGISGEKDVSPDLSC
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS60 MLCSLLLCECLLLVAGYAHDDDWIDPTDMLNYDAASGTMRKSQAKYGISGEKDVSPDLSC
10 20 30 40 50 60
70 80 90 100 110 120
pF1KA0 ADEISECYHKLDSLTYKIDECEKKKREDYESQSNPVFRRYLNKILIEAGKLGLPDENKGD
:::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS60 ADEISECYHKLDSLTYKIDECEKKKREDYESQSNPVFRRYLNKILIEAGKLGL-------
70 80 90 100 110
130 140 150 160 170 180
pF1KA0 MHYDAEIILKRETLLEIQKFLNGEDWKPGALDDALSDILINFKFHDFETWKWRFEDSFGV
CCDS60 ------------------------------------------------------------
190 200 210 220 230 240
pF1KA0 DPYNVLMVLLCLLCIVVLVATELWTYVRWYTQLRRVLIISFLFSLGWNWMYLYKLAFAQH
::::::
CCDS60 ------------------------------------------------------LAFAQH
250 260 270 280 290 300
pF1KA0 QAEVAKMEPLNNVCAKKMDWTGSIWEWFRSSWTYKDDPCQKYYELLLVNPIWLVPPTKAL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS60 QAEVAKMEPLNNVCAKKMDWTGSIWEWFRSSWTYKDDPCQKYYELLLVNPIWLVPPTKAL
120 130 140 150 160 170
310 320 330 340 350 360
pF1KA0 AVTFTTFVTEPLKHIGKGTGEFIKALMKEIPALLHLPVLIIMALAILSFCYGAGKSVHVL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS60 AVTFTTFVTEPLKHIGKGTGEFIKALMKEIPALLHLPVLIIMALAILSFCYGAGKSVHVL
180 190 200 210 220 230
370 380 390 400 410 420
pF1KA0 RHIGGPESEPPQALRPRDRRRQEEIDYRPDGGAGDADFHYRGQMGPTEQGPYAKTYEGRR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS60 RHIGGPESEPPQALRPRDRRRQEEIDYRPDGGAGDADFHYRGQMGPTEQGPYAKTYEGRR
240 250 260 270 280 290
430 440 450 460 470 480
pF1KA0 EILRERDVDLRFQTGNKSPEVLRAFDVPDAEAREHPTVVPSHKSPVLDTKPKETGGILGE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS60 EILRERDVDLRFQTGNKSPEVLRAFDVPDAEAREHPTVVPSHKSPVLDTKPKETGGILGE
300 310 320 330 340 350
490 500 510 520 530 540
pF1KA0 GTPKESSTESSQSAKPVSGQDTSGNTEGSPAAEKAQLKSEAAGSPDQGSTYSPARGVAGP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS60 GTPKESSTESSQSAKPVSGQDTSGNTEGSPAAEKAQLKSEAAGSPDQGSTYSPARGVAGP
360 370 380 390 400 410
550
pF1KA0 RGQDPVSSPCG
:::::::::::
CCDS60 RGQDPVSSPCG
420 430
>>CCDS60214.1 CLCC1 gene_id:23155|Hs108|chr1 (366 aa)
initn: 2452 init1: 1697 opt: 1698 Z-score: 1489.3 bits: 284.8 E(32554): 1.2e-76
Smith-Waterman score: 2086; 66.4% identity (66.4% similar) in 551 aa overlap (1-551:1-366)
10 20 30 40 50 60
pF1KA0 MLCSLLLCECLLLVAGYAHDDDWIDPTDMLNYDAASGTMRKSQAKYGISGEKDVSPDLSC
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS60 MLCSLLLCECLLLVAGYAHDDDWIDPTDMLNYDAASGTMRKSQAKYGISGEKDVSPDLSC
10 20 30 40 50 60
70 80 90 100 110 120
pF1KA0 ADEISECYHKLDSLTYKIDECEKKKREDYESQSNPVFRRYLNKILIEAGKLGLPDENKGD
:::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS60 ADEISECYHKLDSLTYKIDECEKKKREDYESQSNPVFRRYLNKILIEAGKLGL-------
70 80 90 100 110
130 140 150 160 170 180
pF1KA0 MHYDAEIILKRETLLEIQKFLNGEDWKPGALDDALSDILINFKFHDFETWKWRFEDSFGV
CCDS60 ------------------------------------------------------------
190 200 210 220 230 240
pF1KA0 DPYNVLMVLLCLLCIVVLVATELWTYVRWYTQLRRVLIISFLFSLGWNWMYLYKLAFAQH
CCDS60 ------------------------------------------------------------
250 260 270 280 290 300
pF1KA0 QAEVAKMEPLNNVCAKKMDWTGSIWEWFRSSWTYKDDPCQKYYELLLVNPIWLVPPTKAL
::
CCDS60 ----------------------------------------------------------AL
310 320 330 340 350 360
pF1KA0 AVTFTTFVTEPLKHIGKGTGEFIKALMKEIPALLHLPVLIIMALAILSFCYGAGKSVHVL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS60 AVTFTTFVTEPLKHIGKGTGEFIKALMKEIPALLHLPVLIIMALAILSFCYGAGKSVHVL
120 130 140 150 160 170
370 380 390 400 410 420
pF1KA0 RHIGGPESEPPQALRPRDRRRQEEIDYRPDGGAGDADFHYRGQMGPTEQGPYAKTYEGRR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS60 RHIGGPESEPPQALRPRDRRRQEEIDYRPDGGAGDADFHYRGQMGPTEQGPYAKTYEGRR
180 190 200 210 220 230
430 440 450 460 470 480
pF1KA0 EILRERDVDLRFQTGNKSPEVLRAFDVPDAEAREHPTVVPSHKSPVLDTKPKETGGILGE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS60 EILRERDVDLRFQTGNKSPEVLRAFDVPDAEAREHPTVVPSHKSPVLDTKPKETGGILGE
240 250 260 270 280 290
490 500 510 520 530 540
pF1KA0 GTPKESSTESSQSAKPVSGQDTSGNTEGSPAAEKAQLKSEAAGSPDQGSTYSPARGVAGP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS60 GTPKESSTESSQSAKPVSGQDTSGNTEGSPAAEKAQLKSEAAGSPDQGSTYSPARGVAGP
300 310 320 330 340 350
550
pF1KA0 RGQDPVSSPCG
:::::::::::
CCDS60 RGQDPVSSPCG
360
551 residues in 1 query sequences
18511270 residues in 32554 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Wed Nov 2 19:40:45 2016 done: Wed Nov 2 19:40:45 2016
Total Scan time: 3.580 Total Display time: 0.040
Function used was FASTA [36.3.4 Apr, 2011]