Result of FASTA (ccds) for
pFN21AA0528
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KA0528, 1000 aa
1>>>pF1KA0528 1000 - 1000 aa - 1000 aa
Library: human.CCDS.faa
18511270 residues in 32554 sequences
Statistics: Expectation_n fit: rho(ln(x))= 6.9112+/-0.000997; mu= 13.2656+/- 0.060
mean_var=90.8084+/-17.997, 0's: 0 Z-trim(106.1): 58 B-trim: 96 in 2/51
Lambda= 0.134590
statistics sampled from 8718 (8774) to 8718 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.629), E-opt: 0.2 (0.27), width: 16
Scan time: 4.260
The best scores are: opt bits E(32554)
CCDS31758.1 C2CD5 gene_id:9847|Hs108|chr12 (1000) 6645 1301.1 0
CCDS66337.1 C2CD5 gene_id:9847|Hs108|chr12 (1051) 5633 1104.6 0
CCDS66340.1 C2CD5 gene_id:9847|Hs108|chr12 (1053) 5109 1002.8 0
CCDS66338.1 C2CD5 gene_id:9847|Hs108|chr12 (1042) 3532 696.6 6.7e-200
CCDS66339.1 C2CD5 gene_id:9847|Hs108|chr12 (1054) 3116 615.9 1.4e-175
>>CCDS31758.1 C2CD5 gene_id:9847|Hs108|chr12 (1000 aa)
initn: 6645 init1: 6645 opt: 6645 Z-score: 6969.4 bits: 1301.1 E(32554): 0
Smith-Waterman score: 6645; 100.0% identity (100.0% similar) in 1000 aa overlap (1-1000:1-1000)
10 20 30 40 50 60
pF1KA0 MPGKLKVKIVAGRHLPVMDRASDLTDAFVEVKFGNTTFKTDVYLKSLNPQWNSEWFKFEV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS31 MPGKLKVKIVAGRHLPVMDRASDLTDAFVEVKFGNTTFKTDVYLKSLNPQWNSEWFKFEV
10 20 30 40 50 60
70 80 90 100 110 120
pF1KA0 DDEDLQDEPLQITVLDHDTYSANDAIGKVYIDIDPLLYSEAATVISGWFPIYDTIHGIRG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS31 DDEDLQDEPLQITVLDHDTYSANDAIGKVYIDIDPLLYSEAATVISGWFPIYDTIHGIRG
70 80 90 100 110 120
130 140 150 160 170 180
pF1KA0 EINVVVKVDLFNDLNRFRQSSCGVKFFCTTSIPKCYRAVIIHGFVEELVVNEDPEYQWID
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS31 EINVVVKVDLFNDLNRFRQSSCGVKFFCTTSIPKCYRAVIIHGFVEELVVNEDPEYQWID
130 140 150 160 170 180
190 200 210 220 230 240
pF1KA0 RIRTPRASNEARQRLISLMSGELQRKIGLKVLEMRGNAVVGYLQCFDLEGESGLVVRAIG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS31 RIRTPRASNEARQRLISLMSGELQRKIGLKVLEMRGNAVVGYLQCFDLEGESGLVVRAIG
190 200 210 220 230 240
250 260 270 280 290 300
pF1KA0 TACTLDKLSSPAAFLPACNSPSKEMKEIPFNEDPNPNTHSSGPSTPLKNQTYSFSPSKSY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS31 TACTLDKLSSPAAFLPACNSPSKEMKEIPFNEDPNPNTHSSGPSTPLKNQTYSFSPSKSY
250 260 270 280 290 300
310 320 330 340 350 360
pF1KA0 SRQSSSSDTDLSLTPKTGMGSGSAGKEGGPFKALLRQQTQSALEQREFPFFTLTAFPPGF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS31 SRQSSSSDTDLSLTPKTGMGSGSAGKEGGPFKALLRQQTQSALEQREFPFFTLTAFPPGF
310 320 330 340 350 360
370 380 390 400 410 420
pF1KA0 LVHVGGVVSARSVKLLDRIHNPDEPETRDAWWAEIRQEIKSHAKALGCHAVVGYSESTSI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS31 LVHVGGVVSARSVKLLDRIHNPDEPETRDAWWAEIRQEIKSHAKALGCHAVVGYSESTSI
370 380 390 400 410 420
430 440 450 460 470 480
pF1KA0 CEEVCILSASGTAAVLNPRFLQDGTVEGCLEQRLEENLPTRCGFCHIPYDELNMPFPAHL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS31 CEEVCILSASGTAAVLNPRFLQDGTVEGCLEQRLEENLPTRCGFCHIPYDELNMPFPAHL
430 440 450 460 470 480
490 500 510 520 530 540
pF1KA0 TYCYNCRKQKVPDVLFTTIDLPTDATVIGKGCLIQARLCRLKKKAQAEANATAISNLLPF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS31 TYCYNCRKQKVPDVLFTTIDLPTDATVIGKGCLIQARLCRLKKKAQAEANATAISNLLPF
490 500 510 520 530 540
550 560 570 580 590 600
pF1KA0 MEYEVHTQLMNKLKLKGMNALFGLRIQITVGENMLMGLASATGVYLAALPTPGGIQIAGK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS31 MEYEVHTQLMNKLKLKGMNALFGLRIQITVGENMLMGLASATGVYLAALPTPGGIQIAGK
550 560 570 580 590 600
610 620 630 640 650 660
pF1KA0 TPNDGSYEQHISHMQKKINDTIAKNKELYEINPPEISEEIIGSPIPEPRQRSRLLRSQSE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS31 TPNDGSYEQHISHMQKKINDTIAKNKELYEINPPEISEEIIGSPIPEPRQRSRLLRSQSE
610 620 630 640 650 660
670 680 690 700 710 720
pF1KA0 SSDEVTELDLSHGKKDAFVLEIDDTDAMEDVHSLLTDVPPPSGFYSCNTEIMPGINNWTS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS31 SSDEVTELDLSHGKKDAFVLEIDDTDAMEDVHSLLTDVPPPSGFYSCNTEIMPGINNWTS
670 680 690 700 710 720
730 740 750 760 770 780
pF1KA0 EIQMFTSVRVIRLSSLNLTNQALNKNFNDLCENLLKSLYFKLRSMIPCCLCHVNFTVSLP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS31 EIQMFTSVRVIRLSSLNLTNQALNKNFNDLCENLLKSLYFKLRSMIPCCLCHVNFTVSLP
730 740 750 760 770 780
790 800 810 820 830 840
pF1KA0 EDELIQVTVTAVAITFDKNQALQTTKTPVEKSLQRASTDNEELLQFPLELCSDSLPSHPF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS31 EDELIQVTVTAVAITFDKNQALQTTKTPVEKSLQRASTDNEELLQFPLELCSDSLPSHPF
790 800 810 820 830 840
850 860 870 880 890 900
pF1KA0 PPAKAMTVEKASPVGDGNFRNRSAPPCANSTVGVVKMTPLSFIPGAKITKYLGIINMFFI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS31 PPAKAMTVEKASPVGDGNFRNRSAPPCANSTVGVVKMTPLSFIPGAKITKYLGIINMFFI
850 860 870 880 890 900
910 920 930 940 950 960
pF1KA0 RETTSLREEGGVSGFLHAFIAEVFAMVRAHVAALGGNAVVSYIMKQCVFMENPNKNQAQC
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS31 RETTSLREEGGVSGFLHAFIAEVFAMVRAHVAALGGNAVVSYIMKQCVFMENPNKNQAQC
910 920 930 940 950 960
970 980 990 1000
pF1KA0 LINVSGDAVVFVRESDLEVVSSQQPTTNCQSSCTEGEVTT
::::::::::::::::::::::::::::::::::::::::
CCDS31 LINVSGDAVVFVRESDLEVVSSQQPTTNCQSSCTEGEVTT
970 980 990 1000
>>CCDS66337.1 C2CD5 gene_id:9847|Hs108|chr12 (1051 aa)
initn: 6626 init1: 5630 opt: 5633 Z-score: 5907.1 bits: 1104.6 E(32554): 0
Smith-Waterman score: 6399; 95.0% identity (95.1% similar) in 1032 aa overlap (1-981:1-1032)
10 20 30 40 50 60
pF1KA0 MPGKLKVKIVAGRHLPVMDRASDLTDAFVEVKFGNTTFKTDVYLKSLNPQWNSEWFKFEV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS66 MPGKLKVKIVAGRHLPVMDRASDLTDAFVEVKFGNTTFKTDVYLKSLNPQWNSEWFKFEV
10 20 30 40 50 60
70 80 90 100 110 120
pF1KA0 DDEDLQDEPLQITVLDHDTYSANDAIGKVYIDIDPLLYSEAATVISGWFPIYDTIHGIRG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS66 DDEDLQDEPLQITVLDHDTYSANDAIGKVYIDIDPLLYSEAATVISGWFPIYDTIHGIRG
70 80 90 100 110 120
130 140 150 160 170 180
pF1KA0 EINVVVKVDLFNDLNRFRQSSCGVKFFCTTSIPKCYRAVIIHGFVEELVVNEDPEYQWID
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS66 EINVVVKVDLFNDLNRFRQSSCGVKFFCTTSIPKCYRAVIIHGFVEELVVNEDPEYQWID
130 140 150 160 170 180
190 200 210 220 230 240
pF1KA0 RIRTPRASNEARQRLISLMSGELQRKIGLKVLEMRGNAVVGYLQCFDLEGESGLVVRAIG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS66 RIRTPRASNEARQRLISLMSGELQRKIGLKVLEMRGNAVVGYLQCFDLEGESGLVVRAIG
190 200 210 220 230 240
250 260 270 280 290 300
pF1KA0 TACTLDKLSSPAAFLPACNSPSKEMKEIPFNEDPNPNTHSSGPSTPLKNQTYSFSPSKSY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS66 TACTLDKLSSPAAFLPACNSPSKEMKEIPFNEDPNPNTHSSGPSTPLKNQTYSFSPSKSY
250 260 270 280 290 300
310 320 330 340 350 360
pF1KA0 SRQSSSSDTDLSLTPKTGMGSGSAGKEGGPFKALLRQQTQSALEQREFPFFTLTAFPPGF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS66 SRQSSSSDTDLSLTPKTGMGSGSAGKEGGPFKALLRQQTQSALEQREFPFFTLTAFPPGF
310 320 330 340 350 360
370 380 390 400 410 420
pF1KA0 LVHVGGVVSARSVKLLDRIHNPDEPETRDAWWAEIRQEIKSHAKALGCHAVVGYSESTSI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS66 LVHVGGVVSARSVKLLDRIHNPDEPETRDAWWAEIRQEIKSHAKALGCHAVVGYSESTSI
370 380 390 400 410 420
430 440 450 460 470 480
pF1KA0 CEEVCILSASGTAAVLNPRFLQDGTVEGCLEQRLEENLPTRCGFCHIPYDELNMPFPAHL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS66 CEEVCILSASGTAAVLNPRFLQDGTVEGCLEQRLEENLPTRCGFCHIPYDELNMPFPAHL
430 440 450 460 470 480
490 500 510 520 530 540
pF1KA0 TYCYNCRKQKVPDVLFTTIDLPTDATVIGKGCLIQARLCRLKKKAQAEANATAISNLLPF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS66 TYCYNCRKQKVPDVLFTTIDLPTDATVIGKGCLIQARLCRLKKKAQAEANATAISNLLPF
490 500 510 520 530 540
550 560 570 580 590 600
pF1KA0 MEYEVHTQLMNKLKLKGMNALFGLRIQITVGENMLMGLASATGVYLAALPTPGGIQIAGK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS66 MEYEVHTQLMNKLKLKGMNALFGLRIQITVGENMLMGLASATGVYLAALPTPGGIQIAGK
550 560 570 580 590 600
610 620 630 640 650 660
pF1KA0 TPNDGSYEQHISHMQKKINDTIAKNKELYEINPPEISEEIIGSPIPEPRQRSRLLRSQSE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS66 TPNDGSYEQHISHMQKKINDTIAKNKELYEINPPEISEEIIGSPIPEPRQRSRLLRSQSE
610 620 630 640 650 660
670 680 690 700 710 720
pF1KA0 SSDEVTELDLSHGKKDAFVLEIDDTDAMEDVHSLLTDVPPPSGFYSCNTEIMPGINNWTS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS66 SSDEVTELDLSHGKKDAFVLEIDDTDAMEDVHSLLTDVPPPSGFYSCNTEIMPGINNWTS
670 680 690 700 710 720
730 740 750 760 770 780
pF1KA0 EIQMFTSVRVIRLSSLNLTNQALNKNFNDLCENLLKSLYFKLRSMIPCCLCHVNFTVSLP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS66 EIQMFTSVRVIRLSSLNLTNQALNKNFNDLCENLLKSLYFKLRSMIPCCLCHVNFTVSLP
730 740 750 760 770 780
790 800 810 820 830 840
pF1KA0 EDELIQVTVTAVAITFDKNQALQTTKTPVEKSLQRASTDNEELLQFPLELCSDSLPSHPF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS66 EDELIQVTVTAVAITFDKNQALQTTKTPVEKSLQRASTDNEELLQFPLELCSDSLPSHPF
790 800 810 820 830 840
pF1KA0 PPAK---------------------------------------------------AMTVE
:::: .::::
CCDS66 PPAKEHLESASSNSGIPAAQRATSVDYSSFADRCSSWIELIKLKAQTIRRGSIKTTMTVE
850 860 870 880 890 900
850 860 870 880 890 900
pF1KA0 KASPVGDGNFRNRSAPPCANSTVGVVKMTPLSFIPGAKITKYLGIINMFFIRETTSLREE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS66 KASPVGDGNFRNRSAPPCANSTVGVVKMTPLSFIPGAKITKYLGIINMFFIRETTSLREE
910 920 930 940 950 960
910 920 930 940 950 960
pF1KA0 GGVSGFLHAFIAEVFAMVRAHVAALGGNAVVSYIMKQCVFMENPNKNQAQCLINVSGDAV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS66 GGVSGFLHAFIAEVFAMVRAHVAALGGNAVVSYIMKQCVFMENPNKNQAQCLINVSGDAV
970 980 990 1000 1010 1020
970 980 990 1000
pF1KA0 VFVRESDLEVVSSQQPTTNCQSSCTEGEVTT
::::::::::::
CCDS66 VFVRESDLEVVSSQQPTTNCQSSCTEGEVTT
1030 1040 1050
>>CCDS66340.1 C2CD5 gene_id:9847|Hs108|chr12 (1053 aa)
initn: 6119 init1: 3333 opt: 5109 Z-score: 5357.2 bits: 1002.8 E(32554): 0
Smith-Waterman score: 6038; 90.0% identity (91.7% similar) in 1043 aa overlap (1-981:1-1034)
10 20 30 40 50 60
pF1KA0 MPGKLKVKIVAGRHLPVMDRASDLTDAFVEVKFGNTTFKTDVYLKSLNPQWNSEWFKFEV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS66 MPGKLKVKIVAGRHLPVMDRASDLTDAFVEVKFGNTTFKTDVYLKSLNPQWNSEWFKFEV
10 20 30 40 50 60
70 80 90 100 110 120
pF1KA0 DDEDLQDEPLQITVLDHDTYSANDAIGKVYIDIDPLLYSEAATVISGWFPIYDTIHGIRG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS66 DDEDLQDEPLQITVLDHDTYSANDAIGKVYIDIDPLLYSEAATVISGWFPIYDTIHGIRG
70 80 90 100 110 120
130 140 150 160 170 180
pF1KA0 EINVVVKVDLFNDLNRFRQSSCGVKFFCTTSIPKCYRAVIIHGFVEELVVNEDPEYQWID
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS66 EINVVVKVDLFNDLNRFRQSSCGVKFFCTTSIPKCYRAVIIHGFVEELVVNEDPEYQWID
130 140 150 160 170 180
190 200 210 220 230 240
pF1KA0 RIRTPRASNEARQRLISLMSGELQRKIGLKVLEMRGNAVVGYLQCFDLEGESGLVVRAIG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS66 RIRTPRASNEARQRLISLMSGELQRKIGLKVLEMRGNAVVGYLQCFDLEGESGLVVRAIG
190 200 210 220 230 240
250 260 270 280 290 300
pF1KA0 TACTLDKLSSPAAFLPACNSPSKEMKEIPFNEDPNPNTHSSGPSTPLKNQTYSFSPSKSY
::::::::::::::::::::::::::: :. . :. . .:. : :... : :
CCDS66 TACTLDKLSSPAAFLPACNSPSKEMKESPLVHPPSHGCRSTHNS-PIHTATGS-------
250 260 270 280 290
310 320 330 340
pF1KA0 SRQSSSSDTDLSLTPKTGMGSGSAGKEGGPFKALLRQQTQSALEQR-----------EFP
: ... .... :::::::::::::::::::::::::::::: :::
CCDS66 -RLTQNFSVSVPTLIYTGMGSGSAGKEGGPFKALLRQQTQSALEQRGGSPHRFCRRREFP
300 310 320 330 340 350
350 360 370 380 390 400
pF1KA0 FFTLTAFPPGFLVHVGGVVSARSVKLLDRIHNPDEPETRDAWWAEIRQEIKSHAKALGCH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS66 FFTLTAFPPGFLVHVGGVVSARSVKLLDRIHNPDEPETRDAWWAEIRQEIKSHAKALGCH
360 370 380 390 400 410
410 420 430 440 450 460
pF1KA0 AVVGYSESTSICEEVCILSASGTAAVLNPRFLQDGTVEGCLEQRLEENLPTRCGFCHIPY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS66 AVVGYSESTSICEEVCILSASGTAAVLNPRFLQDGTVEGCLEQRLEENLPTRCGFCHIPY
420 430 440 450 460 470
470 480 490 500 510 520
pF1KA0 DELNMPFPAHLTYCYNCRKQKVPDVLFTTIDLPTDATVIGKGCLIQARLCRLKKKAQAEA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS66 DELNMPFPAHLTYCYNCRKQKVPDVLFTTIDLPTDATVIGKGCLIQARLCRLKKKAQAEA
480 490 500 510 520 530
530 540 550 560 570 580
pF1KA0 NATAISNLLPFMEYEVHTQLMNKLKLKGMNALFGLRIQITVGENMLMGLASATGVYLAAL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS66 NATAISNLLPFMEYEVHTQLMNKLKLKGMNALFGLRIQITVGENMLMGLASATGVYLAAL
540 550 560 570 580 590
590 600 610 620 630 640
pF1KA0 PTPGGIQIAGKTPNDGSYEQHISHMQKKINDTIAKNKELYEINPPEISEEIIGSPIPEPR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS66 PTPGGIQIAGKTPNDGSYEQHISHMQKKINDTIAKNKELYEINPPEISEEIIGSPIPEPR
600 610 620 630 640 650
650 660 670 680 690 700
pF1KA0 QRSRLLRSQSESSDEVTELDLSHGKKDAFVLEIDDTDAMEDVHSLLTDVPPPSGFYSCNT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS66 QRSRLLRSQSESSDEVTELDLSHGKKDAFVLEIDDTDAMEDVHSLLTDVPPPSGFYSCNT
660 670 680 690 700 710
710 720 730 740 750 760
pF1KA0 EIMPGINNWTSEIQMFTSVRVIRLSSLNLTNQALNKNFNDLCENLLKSLYFKLRSMIPCC
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS66 EIMPGINNWTSEIQMFTSVRVIRLSSLNLTNQALNKNFNDLCENLLKSLYFKLRSMIPCC
720 730 740 750 760 770
770 780 790 800 810 820
pF1KA0 LCHVNFTVSLPEDELIQVTVTAVAITFDKNQALQTTKTPVEKSLQRASTDNEELLQFPLE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS66 LCHVNFTVSLPEDELIQVTVTAVAITFDKNQALQTTKTPVEKSLQRASTDNEELLQFPLE
780 790 800 810 820 830
830 840
pF1KA0 LCSDSLPSHPFPPAK---------------------------------------------
:::::::::::::::
CCDS66 LCSDSLPSHPFPPAKEHLESASSNSGIPAAQRATSVDYSSFADRCSSWIELIKLKAQTIR
840 850 860 870 880 890
850 860 870 880 890
pF1KA0 ------AMTVEKASPVGDGNFRNRSAPPCANSTVGVVKMTPLSFIPGAKITKYLGIINMF
.:::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS66 RGSIKTTMTVEKASPVGDGNFRNRSAPPCANSTVGVVKMTPLSFIPGAKITKYLGIINMF
900 910 920 930 940 950
900 910 920 930 940 950
pF1KA0 FIRETTSLREEGGVSGFLHAFIAEVFAMVRAHVAALGGNAVVSYIMKQCVFMENPNKNQA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS66 FIRETTSLREEGGVSGFLHAFIAEVFAMVRAHVAALGGNAVVSYIMKQCVFMENPNKNQA
960 970 980 990 1000 1010
960 970 980 990 1000
pF1KA0 QCLINVSGDAVVFVRESDLEVVSSQQPTTNCQSSCTEGEVTT
:::::::::::::::::::::::
CCDS66 QCLINVSGDAVVFVRESDLEVVSSQQPTTNCQSSCTEGEVTT
1020 1030 1040 1050
>>CCDS66338.1 C2CD5 gene_id:9847|Hs108|chr12 (1042 aa)
initn: 4522 init1: 3526 opt: 3532 Z-score: 3702.4 bits: 696.6 E(32554): 6.7e-200
Smith-Waterman score: 6070; 91.0% identity (92.6% similar) in 1032 aa overlap (1-981:1-1023)
10 20 30 40 50 60
pF1KA0 MPGKLKVKIVAGRHLPVMDRASDLTDAFVEVKFGNTTFKTDVYLKSLNPQWNSEWFKFEV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS66 MPGKLKVKIVAGRHLPVMDRASDLTDAFVEVKFGNTTFKTDVYLKSLNPQWNSEWFKFEV
10 20 30 40 50 60
70 80 90 100 110 120
pF1KA0 DDEDLQDEPLQITVLDHDTYSANDAIGKVYIDIDPLLYSEAATVISGWFPIYDTIHGIRG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS66 DDEDLQDEPLQITVLDHDTYSANDAIGKVYIDIDPLLYSEAATVISGWFPIYDTIHGIRG
70 80 90 100 110 120
130 140 150 160 170 180
pF1KA0 EINVVVKVDLFNDLNRFRQSSCGVKFFCTTSIPKCYRAVIIHGFVEELVVNEDPEYQWID
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS66 EINVVVKVDLFNDLNRFRQSSCGVKFFCTTSIPKCYRAVIIHGFVEELVVNEDPEYQWID
130 140 150 160 170 180
190 200 210 220 230 240
pF1KA0 RIRTPRASNEARQRLISLMSGELQRKIGLKVLEMRGNAVVGYLQCFDLEGESGLVVRAIG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS66 RIRTPRASNEARQRLISLMSGELQRKIGLKVLEMRGNAVVGYLQCFDLEGESGLVVRAIG
190 200 210 220 230 240
250 260 270 280 290 300
pF1KA0 TACTLDKLSSPAAFLPACNSPSKEMKEIPFNEDPNPNTHSSGPSTPLKNQTYSFSPSKSY
::::::::::::::::::::::::::: :. . :. . .:. : :... : :
CCDS66 TACTLDKLSSPAAFLPACNSPSKEMKESPLVHPPSHGCRSTHNS-PIHTATGS-------
250 260 270 280 290
310 320 330 340 350 360
pF1KA0 SRQSSSSDTDLSLTPKTGMGSGSAGKEGGPFKALLRQQTQSALEQREFPFFTLTAFPPGF
: ... .... ::::::::::::::::::::::::::::::::::::::::::::
CCDS66 -RLTQNFSVSVPTLIYTGMGSGSAGKEGGPFKALLRQQTQSALEQREFPFFTLTAFPPGF
300 310 320 330 340 350
370 380 390 400 410 420
pF1KA0 LVHVGGVVSARSVKLLDRIHNPDEPETRDAWWAEIRQEIKSHAKALGCHAVVGYSESTSI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS66 LVHVGGVVSARSVKLLDRIHNPDEPETRDAWWAEIRQEIKSHAKALGCHAVVGYSESTSI
360 370 380 390 400 410
430 440 450 460 470 480
pF1KA0 CEEVCILSASGTAAVLNPRFLQDGTVEGCLEQRLEENLPTRCGFCHIPYDELNMPFPAHL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS66 CEEVCILSASGTAAVLNPRFLQDGTVEGCLEQRLEENLPTRCGFCHIPYDELNMPFPAHL
420 430 440 450 460 470
490 500 510 520 530 540
pF1KA0 TYCYNCRKQKVPDVLFTTIDLPTDATVIGKGCLIQARLCRLKKKAQAEANATAISNLLPF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS66 TYCYNCRKQKVPDVLFTTIDLPTDATVIGKGCLIQARLCRLKKKAQAEANATAISNLLPF
480 490 500 510 520 530
550 560 570 580 590 600
pF1KA0 MEYEVHTQLMNKLKLKGMNALFGLRIQITVGENMLMGLASATGVYLAALPTPGGIQIAGK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS66 MEYEVHTQLMNKLKLKGMNALFGLRIQITVGENMLMGLASATGVYLAALPTPGGIQIAGK
540 550 560 570 580 590
610 620 630 640 650 660
pF1KA0 TPNDGSYEQHISHMQKKINDTIAKNKELYEINPPEISEEIIGSPIPEPRQRSRLLRSQSE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS66 TPNDGSYEQHISHMQKKINDTIAKNKELYEINPPEISEEIIGSPIPEPRQRSRLLRSQSE
600 610 620 630 640 650
670 680 690 700 710 720
pF1KA0 SSDEVTELDLSHGKKDAFVLEIDDTDAMEDVHSLLTDVPPPSGFYSCNTEIMPGINNWTS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS66 SSDEVTELDLSHGKKDAFVLEIDDTDAMEDVHSLLTDVPPPSGFYSCNTEIMPGINNWTS
660 670 680 690 700 710
730 740 750 760 770 780
pF1KA0 EIQMFTSVRVIRLSSLNLTNQALNKNFNDLCENLLKSLYFKLRSMIPCCLCHVNFTVSLP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS66 EIQMFTSVRVIRLSSLNLTNQALNKNFNDLCENLLKSLYFKLRSMIPCCLCHVNFTVSLP
720 730 740 750 760 770
790 800 810 820 830 840
pF1KA0 EDELIQVTVTAVAITFDKNQALQTTKTPVEKSLQRASTDNEELLQFPLELCSDSLPSHPF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS66 EDELIQVTVTAVAITFDKNQALQTTKTPVEKSLQRASTDNEELLQFPLELCSDSLPSHPF
780 790 800 810 820 830
pF1KA0 PPAK---------------------------------------------------AMTVE
:::: .::::
CCDS66 PPAKEHLESASSNSGIPAAQRATSVDYSSFADRCSSWIELIKLKAQTIRRGSIKTTMTVE
840 850 860 870 880 890
850 860 870 880 890 900
pF1KA0 KASPVGDGNFRNRSAPPCANSTVGVVKMTPLSFIPGAKITKYLGIINMFFIRETTSLREE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS66 KASPVGDGNFRNRSAPPCANSTVGVVKMTPLSFIPGAKITKYLGIINMFFIRETTSLREE
900 910 920 930 940 950
910 920 930 940 950 960
pF1KA0 GGVSGFLHAFIAEVFAMVRAHVAALGGNAVVSYIMKQCVFMENPNKNQAQCLINVSGDAV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS66 GGVSGFLHAFIAEVFAMVRAHVAALGGNAVVSYIMKQCVFMENPNKNQAQCLINVSGDAV
960 970 980 990 1000 1010
970 980 990 1000
pF1KA0 VFVRESDLEVVSSQQPTTNCQSSCTEGEVTT
::::::::::::
CCDS66 VFVRESDLEVVSSQQPTTNCQSSCTEGEVTT
1020 1030 1040
>>CCDS66339.1 C2CD5 gene_id:9847|Hs108|chr12 (1054 aa)
initn: 5872 init1: 3086 opt: 3116 Z-score: 3265.7 bits: 615.9 E(32554): 1.4e-175
Smith-Waterman score: 6107; 89.9% identity (91.7% similar) in 1054 aa overlap (1-991:1-1045)
10 20 30 40 50 60
pF1KA0 MPGKLKVKIVAGRHLPVMDRASDLTDAFVEVKFGNTTFKTDVYLKSLNPQWNSEWFKFEV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS66 MPGKLKVKIVAGRHLPVMDRASDLTDAFVEVKFGNTTFKTDVYLKSLNPQWNSEWFKFEV
10 20 30 40 50 60
70 80 90 100 110 120
pF1KA0 DDEDLQDEPLQITVLDHDTYSANDAIGKVYIDIDPLLYSEAATVISGWFPIYDTIHGIRG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS66 DDEDLQDEPLQITVLDHDTYSANDAIGKVYIDIDPLLYSEAATVISGWFPIYDTIHGIRG
70 80 90 100 110 120
130 140 150 160 170 180
pF1KA0 EINVVVKVDLFNDLNRFRQSSCGVKFFCTTSIPKCYRAVIIHGFVEELVVNEDPEYQWID
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS66 EINVVVKVDLFNDLNRFRQSSCGVKFFCTTSIPKCYRAVIIHGFVEELVVNEDPEYQWID
130 140 150 160 170 180
190 200 210 220 230 240
pF1KA0 RIRTPRASNEARQRLISLMSGELQRKIGLKVLEMRGNAVVGYLQCFDLEGESGLVVRAIG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS66 RIRTPRASNEARQRLISLMSGELQRKIGLKVLEMRGNAVVGYLQCFDLEGESGLVVRAIG
190 200 210 220 230 240
250 260 270 280 290 300
pF1KA0 TACTLDKLSSPAAFLPACNSPSKEMKEIPFNEDPNPNTHSSGPSTPLKNQTYSFSPSKSY
::::::::::::::::::::::::::: :. . :. . .:. ..:... : :
CCDS66 TACTLDKLSSPAAFLPACNSPSKEMKESPLVHPPSHGCRSTH-NSPIHTATGS-------
250 260 270 280 290
310 320 330 340 350 360
pF1KA0 SRQSSSSDTDLSLTPKTGMGSGSAGKEGGPFKALLRQQTQSALEQREFPFFTLTAFPPGF
: ... .... ::::::::::::::::::::::::::::::::::::::::::::
CCDS66 -RLTQNFSVSVPTLIYTGMGSGSAGKEGGPFKALLRQQTQSALEQREFPFFTLTAFPPGF
300 310 320 330 340 350
370 380 390
pF1KA0 LVHVGGVVSARSVKLLDRIHNP----------------------DEPETRDAWWAEIRQE
:::::::::::::::::::::: ::::::::::::::::
CCDS66 LVHVGGVVSARSVKLLDRIHNPAFVGIMGNTRSYKLLDWNSFNSDEPETRDAWWAEIRQE
360 370 380 390 400 410
400 410 420 430 440 450
pF1KA0 IKSHAKALGCHAVVGYSESTSICEEVCILSASGTAAVLNPRFLQDGTVEGCLEQRLEENL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS66 IKSHAKALGCHAVVGYSESTSICEEVCILSASGTAAVLNPRFLQDGTVEGCLEQRLEENL
420 430 440 450 460 470
460 470 480 490 500 510
pF1KA0 PTRCGFCHIPYDELNMPFPAHLTYCYNCRKQKVPDVLFTTIDLPTDATVIGKGCLIQARL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS66 PTRCGFCHIPYDELNMPFPAHLTYCYNCRKQKVPDVLFTTIDLPTDATVIGKGCLIQARL
480 490 500 510 520 530
520 530 540 550 560 570
pF1KA0 CRLKKKAQAEANATAISNLLPFMEYEVHTQLMNKLKLKGMNALFGLRIQITVGENMLMGL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS66 CRLKKKAQAEANATAISNLLPFMEYEVHTQLMNKLKLKGMNALFGLRIQITVGENMLMGL
540 550 560 570 580 590
580 590 600 610 620 630
pF1KA0 ASATGVYLAALPTPGGIQIAGKTPNDGSYEQHISHMQKKINDTIAKNKELYEINPPEISE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS66 ASATGVYLAALPTPGGIQIAGKTPNDGSYEQHISHMQKKINDTIAKNKELYEINPPEISE
600 610 620 630 640 650
640 650 660 670 680 690
pF1KA0 EIIGSPIPEPRQRSRLLRSQSESSDEVTELDLSHGKKDAFVLEIDDTDAMEDVHSLLTDV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS66 EIIGSPIPEPRQRSRLLRSQSESSDEVTELDLSHGKKDAFVLEIDDTDAMEDVHSLLTDV
660 670 680 690 700 710
700 710 720 730 740 750
pF1KA0 PPPSGFYSCNTEIMPGINNWTSEIQMFTSVRVIRLSSLNLTNQALNKNFNDLCENLLKSL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS66 PPPSGFYSCNTEIMPGINNWTSEIQMFTSVRVIRLSSLNLTNQALNKNFNDLCENLLKSL
720 730 740 750 760 770
760 770 780 790 800 810
pF1KA0 YFKLRSMIPCCLCHVNFTVSLPEDELIQVTVTAVAITFDKNQALQTTKTPVEKSLQRAST
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS66 YFKLRSMIPCCLCHVNFTVSLPEDELIQVTVTAVAITFDKNQALQTTKTPVEKSLQRAST
780 790 800 810 820 830
820 830 840
pF1KA0 DNEELLQFPLELCSDSLPSHPFPPAK----------------------------------
::::::::::::::::::::::::::
CCDS66 DNEELLQFPLELCSDSLPSHPFPPAKEHLESASSNSGIPAAQRDRCSSWIELIKLKAQTI
840 850 860 870 880 890
850 860 870 880 890
pF1KA0 -------AMTVEKASPVGDGNFRNRSAPPCANSTVGVVKMTPLSFIPGAKITKYLGIINM
.::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS66 RRGSIKTTMTVEKASPVGDGNFRNRSAPPCANSTVGVVKMTPLSFIPGAKITKYLGIINM
900 910 920 930 940 950
900 910 920 930 940 950
pF1KA0 FFIRETTSLREEGGVSGFLHAFIAEVFAMVRAHVAALGGNAVVSYIMKQCVFMENPNKNQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS66 FFIRETTSLREEGGVSGFLHAFIAEVFAMVRAHVAALGGNAVVSYIMKQCVFMENPNKNQ
960 970 980 990 1000 1010
960 970 980 990 1000
pF1KA0 AQCLINVSGDAVVFVRESDLEVVSSQQPTTNCQSSCTEGEVTT
::::::::::::::::::::::::::::::::::
CCDS66 AQCLINVSGDAVVFVRESDLEVVSSQQPTTNCQSSCTEGEVTT
1020 1030 1040 1050
1000 residues in 1 query sequences
18511270 residues in 32554 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Wed Nov 2 19:12:50 2016 done: Wed Nov 2 19:12:51 2016
Total Scan time: 4.260 Total Display time: 0.200
Function used was FASTA [36.3.4 Apr, 2011]