Result of FASTA (omim) for
pFN21AE9685
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KE9685, 311 aa
1>>>pF1KE9685 311 - 311 aa - 311 aa
Library: /omim/omim.rfq.tfa
60827320 residues in 85289 sequences
Statistics: Expectation_n fit: rho(ln(x))= 6.1657+/-0.00031; mu= 12.9438+/- 0.020
mean_var=100.1181+/-19.661, 0's: 0 Z-trim(118.0): 165 B-trim: 4 in 1/57
Lambda= 0.128179
statistics sampled from 30280 (30445) to 30280 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.721), E-opt: 0.2 (0.357), width: 16
Scan time: 7.410
The best scores are: opt bits E(85289)
NP_001191005 (OMIM: 606696) katanin p60 ATPase-con ( 311) 2052 389.4 4.9e-108
XP_005266862 (OMIM: 606696) PREDICTED: katanin p60 ( 438) 1119 217.0 5.6e-56
XP_005266861 (OMIM: 606696) PREDICTED: katanin p60 ( 491) 1119 217.0 6.1e-56
NP_008975 (OMIM: 606696) katanin p60 ATPase-contai ( 491) 1119 217.0 6.1e-56
XP_016865699 (OMIM: 606696) PREDICTED: katanin p60 ( 491) 1119 217.0 6.1e-56
XP_016865696 (OMIM: 606696) PREDICTED: katanin p60 ( 491) 1119 217.0 6.1e-56
XP_016865698 (OMIM: 606696) PREDICTED: katanin p60 ( 363) 910 178.3 2.1e-44
XP_016865697 (OMIM: 606696) PREDICTED: katanin p60 ( 363) 910 178.3 2.1e-44
XP_016876280 (OMIM: 614764) PREDICTED: katanin p60 ( 322) 866 170.1 5.3e-42
XP_016876281 (OMIM: 614764) PREDICTED: katanin p60 ( 322) 866 170.1 5.3e-42
XP_016876282 (OMIM: 614764) PREDICTED: katanin p60 ( 322) 866 170.1 5.3e-42
NP_001014402 (OMIM: 614764) katanin p60 ATPase-con ( 490) 866 170.2 7.4e-42
NP_115492 (OMIM: 614764) katanin p60 ATPase-contai ( 490) 866 170.2 7.4e-42
XP_005266631 (OMIM: 614764) PREDICTED: katanin p60 ( 490) 866 170.2 7.4e-42
XP_016881520 (OMIM: 614697) PREDICTED: katanin p60 ( 427) 589 119.0 1.8e-26
XP_005258418 (OMIM: 614697) PREDICTED: katanin p60 ( 427) 589 119.0 1.8e-26
XP_016881519 (OMIM: 614697) PREDICTED: katanin p60 ( 465) 589 119.0 1.9e-26
NP_112593 (OMIM: 614697) katanin p60 ATPase-contai ( 466) 589 119.0 1.9e-26
XP_016881517 (OMIM: 614697) PREDICTED: katanin p60 ( 514) 589 119.0 2e-26
XP_006722617 (OMIM: 614697) PREDICTED: katanin p60 ( 538) 589 119.0 2.1e-26
XP_005258415 (OMIM: 614697) PREDICTED: katanin p60 ( 563) 589 119.0 2.2e-26
XP_005258414 (OMIM: 614697) PREDICTED: katanin p60 ( 564) 589 119.0 2.2e-26
XP_011524570 (OMIM: 609983) PREDICTED: vacuolar pr ( 418) 536 109.2 1.5e-23
NP_004860 (OMIM: 609983) vacuolar protein sorting- ( 444) 536 109.2 1.6e-23
NP_037377 (OMIM: 609982) vacuolar protein sorting- ( 437) 533 108.6 2.3e-23
XP_006722645 (OMIM: 609983) PREDICTED: vacuolar pr ( 326) 529 107.8 3.1e-23
NP_001333488 (OMIM: 615383) fidgetin-like protein ( 563) 520 106.3 1.5e-22
NP_001274425 (OMIM: 615383) fidgetin-like protein ( 563) 520 106.3 1.5e-22
NP_001333487 (OMIM: 615383) fidgetin-like protein ( 563) 520 106.3 1.5e-22
NP_001274424 (OMIM: 615383) fidgetin-like protein ( 674) 520 106.3 1.7e-22
XP_011513772 (OMIM: 615383) PREDICTED: fidgetin-li ( 674) 520 106.3 1.7e-22
NP_001333492 (OMIM: 615383) fidgetin-like protein ( 674) 520 106.3 1.7e-22
NP_001274421 (OMIM: 615383) fidgetin-like protein ( 674) 520 106.3 1.7e-22
NP_001333491 (OMIM: 615383) fidgetin-like protein ( 674) 520 106.3 1.7e-22
NP_001333489 (OMIM: 615383) fidgetin-like protein ( 674) 520 106.3 1.7e-22
NP_001333494 (OMIM: 615383) fidgetin-like protein ( 674) 520 106.3 1.7e-22
XP_016867990 (OMIM: 615383) PREDICTED: fidgetin-li ( 674) 520 106.3 1.7e-22
NP_001274423 (OMIM: 615383) fidgetin-like protein ( 674) 520 106.3 1.7e-22
NP_001274422 (OMIM: 615383) fidgetin-like protein ( 674) 520 106.3 1.7e-22
NP_071399 (OMIM: 615383) fidgetin-like protein 1 i ( 674) 520 106.3 1.7e-22
NP_001333490 (OMIM: 615383) fidgetin-like protein ( 674) 520 106.3 1.7e-22
NP_001036227 (OMIM: 615383) fidgetin-like protein ( 674) 520 106.3 1.7e-22
NP_001333493 (OMIM: 615383) fidgetin-like protein ( 674) 520 106.3 1.7e-22
XP_011524523 (OMIM: 614697) PREDICTED: katanin p60 ( 468) 510 104.4 4.7e-22
XP_011524521 (OMIM: 614697) PREDICTED: katanin p60 ( 519) 509 104.2 5.8e-22
XP_016881521 (OMIM: 614697) PREDICTED: katanin p60 ( 374) 495 101.5 2.7e-21
XP_011524525 (OMIM: 614697) PREDICTED: katanin p60 ( 450) 495 101.6 3.1e-21
XP_016881518 (OMIM: 614697) PREDICTED: katanin p60 ( 485) 495 101.6 3.3e-21
XP_011524522 (OMIM: 614697) PREDICTED: katanin p60 ( 511) 495 101.6 3.5e-21
XP_016860267 (OMIM: 182601,604277) PREDICTED: spas ( 519) 489 100.5 7.5e-21
>>NP_001191005 (OMIM: 606696) katanin p60 ATPase-contain (311 aa)
initn: 2052 init1: 2052 opt: 2052 Z-score: 2060.5 bits: 389.4 E(85289): 4.9e-108
Smith-Waterman score: 2052; 100.0% identity (100.0% similar) in 311 aa overlap (1-311:1-311)
10 20 30 40 50 60
pF1KE9 MSLLMISENVKLAREYALLGNYDSAMVYYQGVLDQMNKYLYSVKDTYLQQKWQQVWQEIN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MSLLMISENVKLAREYALLGNYDSAMVYYQGVLDQMNKYLYSVKDTYLQQKWQQVWQEIN
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE9 VEAKHVKDIMKTLESFKLDSTPLKAAQHDLPASEGEVWSMPVPVERRPSPGPRKRQSSQY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 VEAKHVKDIMKTLESFKLDSTPLKAAQHDLPASEGEVWSMPVPVERRPSPGPRKRQSSQY
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE9 SDPKSHGNRPSTTVRVHRSSAQNVHNDRGKAVRCREKKEQNKGREEKGVLMVGPPGTGKT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 SDPKSHGNRPSTTVRVHRSSAQNVHNDRGKAVRCREKKEQNKGREEKGVLMVGPPGTGKT
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE9 LLAKAVATECKTTFFNVSSSTLTSKYRGESEKLVRLLFEMARFYSPATIFIDEIDSICSR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 LLAKAVATECKTTFFNVSSSTLTSKYRGESEKLVRLLFEMARFYSPATIFIDEIDSICSR
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE9 RGTSEEHEASRRVKAELLVQMDGVGGTSENDDPSKMVMVLAATNFPWDIDEALRRRLEKR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 RGTSEEHEASRRVKAELLVQMDGVGGTSENDDPSKMVMVLAATNFPWDIDEALRRRLEKR
250 260 270 280 290 300
310
pF1KE9 IYIPLPSGMRP
:::::::::::
NP_001 IYIPLPSGMRP
310
>>XP_005266862 (OMIM: 606696) PREDICTED: katanin p60 ATP (438 aa)
initn: 1677 init1: 1119 opt: 1119 Z-score: 1126.0 bits: 217.0 E(85289): 5.6e-56
Smith-Waterman score: 1632; 80.1% identity (85.5% similar) in 332 aa overlap (1-307:1-330)
10 20 30 40 50 60
pF1KE9 MSLLMISENVKLAREYALLGNYDSAMVYYQGVLDQMNKYLYSVKDTYLQQKWQQVWQEIN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 MSLLMISENVKLAREYALLGNYDSAMVYYQGVLDQMNKYLYSVKDTYLQQKWQQVWQEIN
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE9 VEAKHVKDIMKTLESFKLDSTPLKAAQHDLPASEGEVWSMPVPVERRPSPGPRKRQSSQY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 VEAKHVKDIMKTLESFKLDSTPLKAAQHDLPASEGEVWSMPVPVERRPSPGPRKRQSSQY
70 80 90 100 110 120
130 140 150 160 170
pF1KE9 SDPKSHGNRPSTTVRVHRSSAQNVHNDRGKAVRCREKKEQNKGREEKGV--LMVGPPGTG
:::::::::::::::::::::::::::::::::::::::::::::::. : : :.
XP_005 SDPKSHGNRPSTTVRVHRSSAQNVHNDRGKAVRCREKKEQNKGREEKNKSPAAVTEPETN
130 140 150 160 170 180
180 190 200 210 220
pF1KE9 K-------TLLAKAVATECKTTFFNVSSSTLTSKYRGESEKLVR--LLFEM---------
: :..:. . . :: . ... :..::.. ... :
XP_005 KFDSTGYDKDLVEALERDIISQNPNVRWDDIADLV--EAKKLLKEAVVLPMWMPEFFKGI
190 200 210 220 230
230 240 250 260 270
pF1KE9 -----ARFYSPATIFIDEIDSICSRRGTSEEHEASRRVKAELLVQMDGVGGTSENDDPSK
:::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 RRPWKARFYSPATIFIDEIDSICSRRGTSEEHEASRRVKAELLVQMDGVGGTSENDDPSK
240 250 260 270 280 290
280 290 300 310
pF1KE9 MVMVLAATNFPWDIDEALRRRLEKRIYIPLPSGMRP
::::::::::::::::::::::::::::::::
XP_005 MVMVLAATNFPWDIDEALRRRLEKRIYIPLPSAKGREELLRISLRELELADDVDLASIAE
300 310 320 330 340 350
XP_005 NMEGYSGADITNVCRDASLMAMRRRIEGLTPEEIRNLSKEEMHMPTTMEDFEMALKKVSK
360 370 380 390 400 410
>>XP_005266861 (OMIM: 606696) PREDICTED: katanin p60 ATP (491 aa)
initn: 1119 init1: 1119 opt: 1119 Z-score: 1125.3 bits: 217.0 E(85289): 6.1e-56
Smith-Waterman score: 1589; 77.8% identity (77.8% similar) in 343 aa overlap (1-267:1-343)
10 20 30 40 50 60
pF1KE9 MSLLMISENVKLAREYALLGNYDSAMVYYQGVLDQMNKYLYSVKDTYLQQKWQQVWQEIN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 MSLLMISENVKLAREYALLGNYDSAMVYYQGVLDQMNKYLYSVKDTYLQQKWQQVWQEIN
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE9 VEAKHVKDIMKTLESFKLDSTPLKAAQHDLPASEGEVWSMPVPVERRPSPGPRKRQSSQY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 VEAKHVKDIMKTLESFKLDSTPLKAAQHDLPASEGEVWSMPVPVERRPSPGPRKRQSSQY
70 80 90 100 110 120
130 140 150 160
pF1KE9 SDPKSHGNRPSTTVRVHRSSAQNVHNDRGKAVRCREKKEQNKGREEK-------------
:::::::::::::::::::::::::::::::::::::::::::::::
XP_005 SDPKSHGNRPSTTVRVHRSSAQNVHNDRGKAVRCREKKEQNKGREEKNKSPAAVTEPETN
130 140 150 160 170 180
pF1KE9 ------------------------------------------------------------
XP_005 KFDSTGYDKDLVEALERDIISQNPNVRWDDIADLVEAKKLLKEAVVLPMWMPEFFKGIRR
190 200 210 220 230 240
170 180 190 200 210 220
pF1KE9 ---GVLMVGPPGTGKTLLAKAVATECKTTFFNVSSSTLTSKYRGESEKLVRLLFEMARFY
:::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 PWKGVLMVGPPGTGKTLLAKAVATECKTTFFNVSSSTLTSKYRGESEKLVRLLFEMARFY
250 260 270 280 290 300
230 240 250 260 270 280
pF1KE9 SPATIFIDEIDSICSRRGTSEEHEASRRVKAELLVQMDGVGGTSENDDPSKMVMVLAATN
:::::::::::::::::::::::::::::::::::::::::::
XP_005 SPATIFIDEIDSICSRRGTSEEHEASRRVKAELLVQMDGVGGTSENDDPSKMVMVLAATN
310 320 330 340 350 360
290 300 310
pF1KE9 FPWDIDEALRRRLEKRIYIPLPSGMRP
XP_005 FPWDIDEALRRRLEKRIYIPLPSAKGREELLRISLRELELADDVDLASIAENMEGYSGAD
370 380 390 400 410 420
>--
initn: 269 init1: 269 opt: 269 Z-score: 275.8 bits: 59.8 E(85289): 1.3e-08
Smith-Waterman score: 269; 100.0% identity (100.0% similar) in 40 aa overlap (268-307:344-383)
240 250 260 270 280 290
pF1KE9 CSRRGTSEEHEASRRVKAELLVQMDGVGGTSENDDPSKMVMVLAATNFPWDIDEALRRRL
::::::::::::::::::::::::::::::
XP_005 CSRRGTSEEHEASRRVKAELLVQMDGVGGTSENDDPSKMVMVLAATNFPWDIDEALRRRL
320 330 340 350 360 370
300 310
pF1KE9 EKRIYIPLPSGMRP
::::::::::
XP_005 EKRIYIPLPSAKGREELLRISLRELELADDVDLASIAENMEGYSGADITNVCRDASLMAM
380 390 400 410 420 430
>>NP_008975 (OMIM: 606696) katanin p60 ATPase-containing (491 aa)
initn: 1119 init1: 1119 opt: 1119 Z-score: 1125.3 bits: 217.0 E(85289): 6.1e-56
Smith-Waterman score: 1589; 77.8% identity (77.8% similar) in 343 aa overlap (1-267:1-343)
10 20 30 40 50 60
pF1KE9 MSLLMISENVKLAREYALLGNYDSAMVYYQGVLDQMNKYLYSVKDTYLQQKWQQVWQEIN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_008 MSLLMISENVKLAREYALLGNYDSAMVYYQGVLDQMNKYLYSVKDTYLQQKWQQVWQEIN
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE9 VEAKHVKDIMKTLESFKLDSTPLKAAQHDLPASEGEVWSMPVPVERRPSPGPRKRQSSQY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_008 VEAKHVKDIMKTLESFKLDSTPLKAAQHDLPASEGEVWSMPVPVERRPSPGPRKRQSSQY
70 80 90 100 110 120
130 140 150 160
pF1KE9 SDPKSHGNRPSTTVRVHRSSAQNVHNDRGKAVRCREKKEQNKGREEK-------------
:::::::::::::::::::::::::::::::::::::::::::::::
NP_008 SDPKSHGNRPSTTVRVHRSSAQNVHNDRGKAVRCREKKEQNKGREEKNKSPAAVTEPETN
130 140 150 160 170 180
pF1KE9 ------------------------------------------------------------
NP_008 KFDSTGYDKDLVEALERDIISQNPNVRWDDIADLVEAKKLLKEAVVLPMWMPEFFKGIRR
190 200 210 220 230 240
170 180 190 200 210 220
pF1KE9 ---GVLMVGPPGTGKTLLAKAVATECKTTFFNVSSSTLTSKYRGESEKLVRLLFEMARFY
:::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_008 PWKGVLMVGPPGTGKTLLAKAVATECKTTFFNVSSSTLTSKYRGESEKLVRLLFEMARFY
250 260 270 280 290 300
230 240 250 260 270 280
pF1KE9 SPATIFIDEIDSICSRRGTSEEHEASRRVKAELLVQMDGVGGTSENDDPSKMVMVLAATN
:::::::::::::::::::::::::::::::::::::::::::
NP_008 SPATIFIDEIDSICSRRGTSEEHEASRRVKAELLVQMDGVGGTSENDDPSKMVMVLAATN
310 320 330 340 350 360
290 300 310
pF1KE9 FPWDIDEALRRRLEKRIYIPLPSGMRP
NP_008 FPWDIDEALRRRLEKRIYIPLPSAKGREELLRISLRELELADDVDLASIAENMEGYSGAD
370 380 390 400 410 420
>--
initn: 269 init1: 269 opt: 269 Z-score: 275.8 bits: 59.8 E(85289): 1.3e-08
Smith-Waterman score: 269; 100.0% identity (100.0% similar) in 40 aa overlap (268-307:344-383)
240 250 260 270 280 290
pF1KE9 CSRRGTSEEHEASRRVKAELLVQMDGVGGTSENDDPSKMVMVLAATNFPWDIDEALRRRL
::::::::::::::::::::::::::::::
NP_008 CSRRGTSEEHEASRRVKAELLVQMDGVGGTSENDDPSKMVMVLAATNFPWDIDEALRRRL
320 330 340 350 360 370
300 310
pF1KE9 EKRIYIPLPSGMRP
::::::::::
NP_008 EKRIYIPLPSAKGREELLRISLRELELADDVDLASIAENMEGYSGADITNVCRDASLMAM
380 390 400 410 420 430
>>XP_016865699 (OMIM: 606696) PREDICTED: katanin p60 ATP (491 aa)
initn: 1119 init1: 1119 opt: 1119 Z-score: 1125.3 bits: 217.0 E(85289): 6.1e-56
Smith-Waterman score: 1589; 77.8% identity (77.8% similar) in 343 aa overlap (1-267:1-343)
10 20 30 40 50 60
pF1KE9 MSLLMISENVKLAREYALLGNYDSAMVYYQGVLDQMNKYLYSVKDTYLQQKWQQVWQEIN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 MSLLMISENVKLAREYALLGNYDSAMVYYQGVLDQMNKYLYSVKDTYLQQKWQQVWQEIN
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE9 VEAKHVKDIMKTLESFKLDSTPLKAAQHDLPASEGEVWSMPVPVERRPSPGPRKRQSSQY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 VEAKHVKDIMKTLESFKLDSTPLKAAQHDLPASEGEVWSMPVPVERRPSPGPRKRQSSQY
70 80 90 100 110 120
130 140 150 160
pF1KE9 SDPKSHGNRPSTTVRVHRSSAQNVHNDRGKAVRCREKKEQNKGREEK-------------
:::::::::::::::::::::::::::::::::::::::::::::::
XP_016 SDPKSHGNRPSTTVRVHRSSAQNVHNDRGKAVRCREKKEQNKGREEKNKSPAAVTEPETN
130 140 150 160 170 180
pF1KE9 ------------------------------------------------------------
XP_016 KFDSTGYDKDLVEALERDIISQNPNVRWDDIADLVEAKKLLKEAVVLPMWMPEFFKGIRR
190 200 210 220 230 240
170 180 190 200 210 220
pF1KE9 ---GVLMVGPPGTGKTLLAKAVATECKTTFFNVSSSTLTSKYRGESEKLVRLLFEMARFY
:::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 PWKGVLMVGPPGTGKTLLAKAVATECKTTFFNVSSSTLTSKYRGESEKLVRLLFEMARFY
250 260 270 280 290 300
230 240 250 260 270 280
pF1KE9 SPATIFIDEIDSICSRRGTSEEHEASRRVKAELLVQMDGVGGTSENDDPSKMVMVLAATN
:::::::::::::::::::::::::::::::::::::::::::
XP_016 SPATIFIDEIDSICSRRGTSEEHEASRRVKAELLVQMDGVGGTSENDDPSKMVMVLAATN
310 320 330 340 350 360
290 300 310
pF1KE9 FPWDIDEALRRRLEKRIYIPLPSGMRP
XP_016 FPWDIDEALRRRLEKRIYIPLPSAKGREELLRISLRELELADDVDLASIAENMEGYSGAD
370 380 390 400 410 420
>--
initn: 269 init1: 269 opt: 269 Z-score: 275.8 bits: 59.8 E(85289): 1.3e-08
Smith-Waterman score: 269; 100.0% identity (100.0% similar) in 40 aa overlap (268-307:344-383)
240 250 260 270 280 290
pF1KE9 CSRRGTSEEHEASRRVKAELLVQMDGVGGTSENDDPSKMVMVLAATNFPWDIDEALRRRL
::::::::::::::::::::::::::::::
XP_016 CSRRGTSEEHEASRRVKAELLVQMDGVGGTSENDDPSKMVMVLAATNFPWDIDEALRRRL
320 330 340 350 360 370
300 310
pF1KE9 EKRIYIPLPSGMRP
::::::::::
XP_016 EKRIYIPLPSAKGREELLRISLRELELADDVDLASIAENMEGYSGADITNVCRDASLMAM
380 390 400 410 420 430
>>XP_016865696 (OMIM: 606696) PREDICTED: katanin p60 ATP (491 aa)
initn: 1119 init1: 1119 opt: 1119 Z-score: 1125.3 bits: 217.0 E(85289): 6.1e-56
Smith-Waterman score: 1589; 77.8% identity (77.8% similar) in 343 aa overlap (1-267:1-343)
10 20 30 40 50 60
pF1KE9 MSLLMISENVKLAREYALLGNYDSAMVYYQGVLDQMNKYLYSVKDTYLQQKWQQVWQEIN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 MSLLMISENVKLAREYALLGNYDSAMVYYQGVLDQMNKYLYSVKDTYLQQKWQQVWQEIN
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE9 VEAKHVKDIMKTLESFKLDSTPLKAAQHDLPASEGEVWSMPVPVERRPSPGPRKRQSSQY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 VEAKHVKDIMKTLESFKLDSTPLKAAQHDLPASEGEVWSMPVPVERRPSPGPRKRQSSQY
70 80 90 100 110 120
130 140 150 160
pF1KE9 SDPKSHGNRPSTTVRVHRSSAQNVHNDRGKAVRCREKKEQNKGREEK-------------
:::::::::::::::::::::::::::::::::::::::::::::::
XP_016 SDPKSHGNRPSTTVRVHRSSAQNVHNDRGKAVRCREKKEQNKGREEKNKSPAAVTEPETN
130 140 150 160 170 180
pF1KE9 ------------------------------------------------------------
XP_016 KFDSTGYDKDLVEALERDIISQNPNVRWDDIADLVEAKKLLKEAVVLPMWMPEFFKGIRR
190 200 210 220 230 240
170 180 190 200 210 220
pF1KE9 ---GVLMVGPPGTGKTLLAKAVATECKTTFFNVSSSTLTSKYRGESEKLVRLLFEMARFY
:::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 PWKGVLMVGPPGTGKTLLAKAVATECKTTFFNVSSSTLTSKYRGESEKLVRLLFEMARFY
250 260 270 280 290 300
230 240 250 260 270 280
pF1KE9 SPATIFIDEIDSICSRRGTSEEHEASRRVKAELLVQMDGVGGTSENDDPSKMVMVLAATN
:::::::::::::::::::::::::::::::::::::::::::
XP_016 SPATIFIDEIDSICSRRGTSEEHEASRRVKAELLVQMDGVGGTSENDDPSKMVMVLAATN
310 320 330 340 350 360
290 300 310
pF1KE9 FPWDIDEALRRRLEKRIYIPLPSGMRP
XP_016 FPWDIDEALRRRLEKRIYIPLPSAKGREELLRISLRELELADDVDLASIAENMEGYSGAD
370 380 390 400 410 420
>--
initn: 269 init1: 269 opt: 269 Z-score: 275.8 bits: 59.8 E(85289): 1.3e-08
Smith-Waterman score: 269; 100.0% identity (100.0% similar) in 40 aa overlap (268-307:344-383)
240 250 260 270 280 290
pF1KE9 CSRRGTSEEHEASRRVKAELLVQMDGVGGTSENDDPSKMVMVLAATNFPWDIDEALRRRL
::::::::::::::::::::::::::::::
XP_016 CSRRGTSEEHEASRRVKAELLVQMDGVGGTSENDDPSKMVMVLAATNFPWDIDEALRRRL
320 330 340 350 360 370
300 310
pF1KE9 EKRIYIPLPSGMRP
::::::::::
XP_016 EKRIYIPLPSAKGREELLRISLRELELADDVDLASIAENMEGYSGADITNVCRDASLMAM
380 390 400 410 420 430
>>XP_016865698 (OMIM: 606696) PREDICTED: katanin p60 ATP (363 aa)
initn: 910 init1: 910 opt: 910 Z-score: 918.2 bits: 178.3 E(85289): 2.1e-44
Smith-Waterman score: 910; 98.6% identity (98.6% similar) in 144 aa overlap (164-307:112-255)
140 150 160 170 180 190
pF1KE9 VRVHRSSAQNVHNDRGKAVRCREKKEQNKGREEKGVLMVGPPGTGKTLLAKAVATECKTT
: :::::::::::::::::::::::::::
XP_016 DIADLVEAKKLLKEAVVLPMWMPEFFKGIRRPWKGVLMVGPPGTGKTLLAKAVATECKTT
90 100 110 120 130 140
200 210 220 230 240 250
pF1KE9 FFNVSSSTLTSKYRGESEKLVRLLFEMARFYSPATIFIDEIDSICSRRGTSEEHEASRRV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 FFNVSSSTLTSKYRGESEKLVRLLFEMARFYSPATIFIDEIDSICSRRGTSEEHEASRRV
150 160 170 180 190 200
260 270 280 290 300 310
pF1KE9 KAELLVQMDGVGGTSENDDPSKMVMVLAATNFPWDIDEALRRRLEKRIYIPLPSGMRP
::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 KAELLVQMDGVGGTSENDDPSKMVMVLAATNFPWDIDEALRRRLEKRIYIPLPSAKGREE
210 220 230 240 250 260
XP_016 LLRISLRELELADDVDLASIAENMEGYSGADITNVCRDASLMAMRRRIEGLTPEEIRNLS
270 280 290 300 310 320
>>XP_016865697 (OMIM: 606696) PREDICTED: katanin p60 ATP (363 aa)
initn: 910 init1: 910 opt: 910 Z-score: 918.2 bits: 178.3 E(85289): 2.1e-44
Smith-Waterman score: 910; 98.6% identity (98.6% similar) in 144 aa overlap (164-307:112-255)
140 150 160 170 180 190
pF1KE9 VRVHRSSAQNVHNDRGKAVRCREKKEQNKGREEKGVLMVGPPGTGKTLLAKAVATECKTT
: :::::::::::::::::::::::::::
XP_016 DIADLVEAKKLLKEAVVLPMWMPEFFKGIRRPWKGVLMVGPPGTGKTLLAKAVATECKTT
90 100 110 120 130 140
200 210 220 230 240 250
pF1KE9 FFNVSSSTLTSKYRGESEKLVRLLFEMARFYSPATIFIDEIDSICSRRGTSEEHEASRRV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 FFNVSSSTLTSKYRGESEKLVRLLFEMARFYSPATIFIDEIDSICSRRGTSEEHEASRRV
150 160 170 180 190 200
260 270 280 290 300 310
pF1KE9 KAELLVQMDGVGGTSENDDPSKMVMVLAATNFPWDIDEALRRRLEKRIYIPLPSGMRP
::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 KAELLVQMDGVGGTSENDDPSKMVMVLAATNFPWDIDEALRRRLEKRIYIPLPSAKGREE
210 220 230 240 250 260
XP_016 LLRISLRELELADDVDLASIAENMEGYSGADITNVCRDASLMAMRRRIEGLTPEEIRNLS
270 280 290 300 310 320
>>XP_016876280 (OMIM: 614764) PREDICTED: katanin p60 ATP (322 aa)
initn: 863 init1: 863 opt: 866 Z-score: 875.0 bits: 170.1 E(85289): 5.3e-42
Smith-Waterman score: 866; 91.7% identity (97.2% similar) in 144 aa overlap (164-307:71-214)
140 150 160 170 180 190
pF1KE9 VRVHRSSAQNVHNDRGKAVRCREKKEQNKGREEKGVLMVGPPGTGKTLLAKAVATECKTT
: ::::::::::::::.::::::::: ::
XP_016 DIADLEEAKKLLREAVVLPMWMPDFFKGIRRPWKGVLMVGPPGTGKTMLAKAVATECGTT
50 60 70 80 90 100
200 210 220 230 240 250
pF1KE9 FFNVSSSTLTSKYRGESEKLVRLLFEMARFYSPATIFIDEIDSICSRRGTSEEHEASRRV
:::::::::::::::::::::::::::::::.:.:::::::::::::::::.::::::::
XP_016 FFNVSSSTLTSKYRGESEKLVRLLFEMARFYAPTTIFIDEIDSICSRRGTSDEHEASRRV
110 120 130 140 150 160
260 270 280 290 300 310
pF1KE9 KAELLVQMDGVGGTSENDDPSKMVMVLAATNFPWDIDEALRRRLEKRIYIPLPSGMRP
:.:::.:::::::. ::::::::::::::::::::::::::::::::::::::.
XP_016 KSELLIQMDGVGGALENDDPSKMVMVLAATNFPWDIDEALRRRLEKRIYIPLPTAKGRAE
170 180 190 200 210 220
XP_016 LLKINLREVELDPDIQLEDIAEKIEGYSGADITNVCRDASLMAMRRRINGLSPEEIRALS
230 240 250 260 270 280
>>XP_016876281 (OMIM: 614764) PREDICTED: katanin p60 ATP (322 aa)
initn: 863 init1: 863 opt: 866 Z-score: 875.0 bits: 170.1 E(85289): 5.3e-42
Smith-Waterman score: 866; 91.7% identity (97.2% similar) in 144 aa overlap (164-307:71-214)
140 150 160 170 180 190
pF1KE9 VRVHRSSAQNVHNDRGKAVRCREKKEQNKGREEKGVLMVGPPGTGKTLLAKAVATECKTT
: ::::::::::::::.::::::::: ::
XP_016 DIADLEEAKKLLREAVVLPMWMPDFFKGIRRPWKGVLMVGPPGTGKTMLAKAVATECGTT
50 60 70 80 90 100
200 210 220 230 240 250
pF1KE9 FFNVSSSTLTSKYRGESEKLVRLLFEMARFYSPATIFIDEIDSICSRRGTSEEHEASRRV
:::::::::::::::::::::::::::::::.:.:::::::::::::::::.::::::::
XP_016 FFNVSSSTLTSKYRGESEKLVRLLFEMARFYAPTTIFIDEIDSICSRRGTSDEHEASRRV
110 120 130 140 150 160
260 270 280 290 300 310
pF1KE9 KAELLVQMDGVGGTSENDDPSKMVMVLAATNFPWDIDEALRRRLEKRIYIPLPSGMRP
:.:::.:::::::. ::::::::::::::::::::::::::::::::::::::.
XP_016 KSELLIQMDGVGGALENDDPSKMVMVLAATNFPWDIDEALRRRLEKRIYIPLPTAKGRAE
170 180 190 200 210 220
XP_016 LLKINLREVELDPDIQLEDIAEKIEGYSGADITNVCRDASLMAMRRRINGLSPEEIRALS
230 240 250 260 270 280
311 residues in 1 query sequences
60827320 residues in 85289 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Tue Nov 8 10:33:25 2016 done: Tue Nov 8 10:33:26 2016
Total Scan time: 7.410 Total Display time: 0.010
Function used was FASTA [36.3.4 Apr, 2011]