Result of FASTA (ccds) for
pFN21AE9674
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KE9674, 954 aa
1>>>pF1KE9674 954 - 954 aa - 954 aa
Library: human.CCDS.faa
18511270 residues in 32554 sequences
Statistics: Expectation_n fit: rho(ln(x))= 8.8655+/-0.00111; mu= 4.6428+/- 0.066
mean_var=174.5529+/-35.047, 0's: 0 Z-trim(108.3): 73 B-trim: 5 in 1/50
Lambda= 0.097076
statistics sampled from 10045 (10112) to 10045 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.663), E-opt: 0.2 (0.311), width: 16
Scan time: 4.020
The best scores are: opt bits E(32554)
CCDS2403.1 SMARCAL1 gene_id:50485|Hs108|chr2 ( 954) 6236 886.5 0
CCDS67963.1 ZRANB3 gene_id:84083|Hs108|chr2 (1077) 854 132.8 3.6e-30
CCDS46419.1 ZRANB3 gene_id:84083|Hs108|chr2 (1079) 854 132.8 3.6e-30
>>CCDS2403.1 SMARCAL1 gene_id:50485|Hs108|chr2 (954 aa)
initn: 6236 init1: 6236 opt: 6236 Z-score: 4729.6 bits: 886.5 E(32554): 0
Smith-Waterman score: 6236; 99.8% identity (100.0% similar) in 954 aa overlap (1-954:1-954)
10 20 30 40 50 60
pF1KE9 MSLPLTEEQRKKIEENRQKALGRRAEKLLAEQHQRTSSGTSIAGNPFQAKQGPSQNFPRE
:::::::::::::::::::::.::::::::::::::::::::::::::::::::::::::
CCDS24 MSLPLTEEQRKKIEENRQKALARRAEKLLAEQHQRTSSGTSIAGNPFQAKQGPSQNFPRE
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE9 SCKPVSHGVIFKQQNLSSSSNADQRPHDSHSFQAKGIWKKPEEMPTACPGHSPRSQMALT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS24 SCKPVSHGVIFKQQNLSSSSNADQRPHDSHSFQAKGIWKKPEEMPTACPGHSPRSQMALT
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE9 GISPPLAQSPPEVPKQQLLSYELGQGHAQASPEIRFTPFANPTHKPLAKPKSSQETPAHS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS24 GISPPLAQSPPEVPKQQLLSYELGQGHAQASPEIRFTPFANPTHKPLAKPKSSQETPAHS
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE9 SGQPPRDAKLEAKTAKASPSGQNISYIHSSSESVTPRTEGRLQQKSGSSVQKGVNSQKGK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS24 SGQPPRDAKLEAKTAKASPSGQNISYIHSSSESVTPRTEGRLQQKSGSSVQKGVNSQKGK
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE9 CVRNGDRFQVLIGYNAELIAVFKTLPSKNYDPDTKTWNFSMNDYSALMKAAQSLPTVNLQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS24 CVRNGDRFQVLIGYNAELIAVFKTLPSKNYDPDTKTWNFSMNDYSALMKAAQSLPTVNLQ
250 260 270 280 290 300
310 320 330 340 350 360
pF1KE9 PLEWAYGSSESPSTSSEGQAGLPSAPSLSFVKGRCMLISRAYFEADISYSQDLIALFKQM
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS24 PLEWAYGSSESPSTSSEGQAGLPSAPSLSFVKGRCMLISRAYFEADISYSQDLIALFKQM
310 320 330 340 350 360
370 380 390 400 410 420
pF1KE9 DSRRYDVKTRKWSFLLQEHSKLIAKVRCLPQVQLDPLPTTLTLAFASQLKKTSLSLTPDV
::::::::::::::::.:::::::::::::::::::::::::::::::::::::::::::
CCDS24 DSRRYDVKTRKWSFLLEEHSKLIAKVRCLPQVQLDPLPTTLTLAFASQLKKTSLSLTPDV
370 380 390 400 410 420
430 440 450 460 470 480
pF1KE9 PEADLSEVDPKLVSNLMPFQRAGVNFAIAKGGRLLLADDMGLGKTIQAICIAAFYRKEWP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS24 PEADLSEVDPKLVSNLMPFQRAGVNFAIAKGGRLLLADDMGLGKTIQAICIAAFYRKEWP
430 440 450 460 470 480
490 500 510 520 530 540
pF1KE9 LLVVVPSSVRFTWEQAFLRWLPSLSPDCINVVVTGKDRLTAGLINIVSFDLLSKLEKQLK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS24 LLVVVPSSVRFTWEQAFLRWLPSLSPDCINVVVTGKDRLTAGLINIVSFDLLSKLEKQLK
490 500 510 520 530 540
550 560 570 580 590 600
pF1KE9 TPFKVVIIDESHFLKNSRTARCRAAMPVLKVAKRVILLSGTPAMSRPAELYTQIIAVKPT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS24 TPFKVVIIDESHFLKNSRTARCRAAMPVLKVAKRVILLSGTPAMSRPAELYTQIIAVKPT
550 560 570 580 590 600
610 620 630 640 650 660
pF1KE9 FFPQFHAFGLRYCDAKRMPWGWDYSGSSNLGELKLLLEEAVMLRRLKSDVLSQLPAKQRK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS24 FFPQFHAFGLRYCDAKRMPWGWDYSGSSNLGELKLLLEEAVMLRRLKSDVLSQLPAKQRK
610 620 630 640 650 660
670 680 690 700 710 720
pF1KE9 IVVIAPGRINARTRAALDAAAKEMTTKDKTKQQQKDALILFFNRTAEAKIPSVIEYILDL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS24 IVVIAPGRINARTRAALDAAAKEMTTKDKTKQQQKDALILFFNRTAEAKIPSVIEYILDL
670 680 690 700 710 720
730 740 750 760 770 780
pF1KE9 LESGREKFLVFAHHKVVLDAITQELERKHVQHIRIDGSTSSAEREDLCQQFQLSERHAVA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS24 LESGREKFLVFAHHKVVLDAITQELERKHVQHIRIDGSTSSAEREDLCQQFQLSERHAVA
730 740 750 760 770 780
790 800 810 820 830 840
pF1KE9 VLSITAANMGLTFSSADLVVFAELFWNPGVLIQAEDRVHRIGQTSSVGIHYLVAKGTADD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS24 VLSITAANMGLTFSSADLVVFAELFWNPGVLIQAEDRVHRIGQTSSVGIHYLVAKGTADD
790 800 810 820 830 840
850 860 870 880 890 900
pF1KE9 YLWPLIQEKIKVLAEAGLSETNFSEMTESTDYLYKDPKQQKIYDLFQKSFEKEGSDMELL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS24 YLWPLIQEKIKVLAEAGLSETNFSEMTESTDYLYKDPKQQKIYDLFQKSFEKEGSDMELL
850 860 870 880 890 900
910 920 930 940 950
pF1KE9 EAAESFDPGSASGTSGSSSQNMGDTLDESSLTASPQKKRRFEFFDNWDSFTSPL
::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS24 EAAESFDPGSASGTSGSSSQNMGDTLDESSLTASPQKKRRFEFFDNWDSFTSPL
910 920 930 940 950
>>CCDS67963.1 ZRANB3 gene_id:84083|Hs108|chr2 (1077 aa)
initn: 1120 init1: 488 opt: 854 Z-score: 655.1 bits: 132.8 E(32554): 3.6e-30
Smith-Waterman score: 1206; 44.2% identity (72.0% similar) in 457 aa overlap (415-852:10-465)
390 400 410 420 430
pF1KE9 KVRCLPQVQLDPLPTTLTLAFASQLKKTSLSLTPDVP----EAD--LSEVDPKLVSNLMP
:::: . :.: :. . .: ..:.:
CCDS67 MPRVHNIKKSLTPHISCVTNESDNLLDFLPDRLRAKLLP
10 20 30
440 450 460 470 480 490
pF1KE9 FQRAGVNFAIAKGGRLLLADDMGLGKTIQAICIAAFYRKEWPLLVVVPSSVRFTWEQAFL
::. :. ::. ..:: ..::.:::::::::: :. ::..:::::.:::::.:. : . .
CCDS67 FQKDGIIFALKRNGRCMVADEMGLGKTIQAIGITYFYKEEWPLLIVVPSSLRYPWTEEIE
40 50 60 70 80 90
500 510 520 530 540 550
pF1KE9 RWLPSLSPDCINVVVTGKD--RLTAGLINIVSFDLLSKLEKQL-----KTPFKVVIIDES
.:.: :::. :::. . : :.... ...... ::. : : . :::::.:::
CCDS67 KWIPELSPEEINVIQNKTDVRRMSTSKVTVLGYGLLTADAKTLIDALNNQNFKVVIVDES
100 110 120 130 140 150
560 570 580 590 600 610
pF1KE9 HFLKNSRTARCRAAMPVLKVAKRVILLSGTPAMSRPAELYTQIIAVKPTFFPQFHAFGLR
:..:. ..: : .:... :.:.:::.::::..:: ::. :: :. : : .. .. :
CCDS67 HYMKSRNATRSRILLPIVQKARRAILLTGTPALGRPEELFMQIEALFPQKFGRWTDYAKR
160 170 180 190 200 210
620 630 640 650 660
pF1KE9 YCDAKRMPWG----WDYSGSSNLGELKLLLEEAVMLRRLKSDVLSQLPAKQR-KIVVIAP
::.:. .: :: :.:::.::. :: . .:.::::..::.::: : : .: :
CCDS67 YCNAHIRYFGKRPQWDCRGASNLNELHQLLSD-IMIRRLKTEVLTQLPPKVRQRIPFDLP
220 230 240 250 260 270
670 680 690 700 710 720
pF1KE9 GRINARTRAALDAAAKEMTTKDKTKQQQKDALIL-FFNRTAEAKIPSVIEYILDLLESGR
. . .... : : : .. .. .:: .:..:: :: .: .:: .:..
CCDS67 SAAAKELNTSFEEWEKIMRTPNSGAMETVMGLITRMFKQTAIAKAGAVKDYIKMMLQNDS
280 290 300 310 320 330
730 740 750 760 770 780
pF1KE9 EKFLVFAHHKVVLDAITQELERKHVQHIRIDGSTSSAEREDLCQQFQLSERHAVAVLSIT
:::::::: .:.: :. . ......::::::.::.:: : .::: . ::.:::
CCDS67 LKFLVFAHHLSMLQACTEAVIENKTRYIRIDGSVSSSERIHLVNQFQKDPDTRVAILSIQ
340 350 360 370 380 390
790 800 810 820 830 840
pF1KE9 AANMGLTFSSADLVVFAELFWNPGVLIQAEDRVHRIGQTSSVGIHYLVAKGTADDYLWPL
::..::::..:. ::::::.:.:: . :::::.::::: :::.::::.:.:: : .: .
CCDS67 AAGQGLTFTAASHVVFAELYWDPGHIKQAEDRAHRIGQCSSVNIHYLIANGTLDTLMWGM
400 410 420 430 440 450
850 860 870 880 890 900
pF1KE9 IQEKIKVLAEAGLSETNFSEMTESTDYLYKDPKQQKIYDLFQKSFEKEGSDMELLEAAES
...: .:
CCDS67 LNRKAQVTGSTLNGRKEKIQAEEGDKEKWDFLQFAEAWTPNDSSEELRKEALFTHFEKEK
460 470 480 490 500 510
>>CCDS46419.1 ZRANB3 gene_id:84083|Hs108|chr2 (1079 aa)
initn: 1120 init1: 488 opt: 854 Z-score: 655.1 bits: 132.8 E(32554): 3.6e-30
Smith-Waterman score: 1206; 44.2% identity (72.0% similar) in 457 aa overlap (415-852:10-465)
390 400 410 420 430
pF1KE9 KVRCLPQVQLDPLPTTLTLAFASQLKKTSLSLTPDVP----EAD--LSEVDPKLVSNLMP
:::: . :.: :. . .: ..:.:
CCDS46 MPRVHNIKKSLTPHISCVTNESDNLLDFLPDRLRAKLLP
10 20 30
440 450 460 470 480 490
pF1KE9 FQRAGVNFAIAKGGRLLLADDMGLGKTIQAICIAAFYRKEWPLLVVVPSSVRFTWEQAFL
::. :. ::. ..:: ..::.:::::::::: :. ::..:::::.:::::.:. : . .
CCDS46 FQKDGIIFALKRNGRCMVADEMGLGKTIQAIGITYFYKEEWPLLIVVPSSLRYPWTEEIE
40 50 60 70 80 90
500 510 520 530 540 550
pF1KE9 RWLPSLSPDCINVVVTGKD--RLTAGLINIVSFDLLSKLEKQL-----KTPFKVVIIDES
.:.: :::. :::. . : :.... ...... ::. : : . :::::.:::
CCDS46 KWIPELSPEEINVIQNKTDVRRMSTSKVTVLGYGLLTADAKTLIDALNNQNFKVVIVDES
100 110 120 130 140 150
560 570 580 590 600 610
pF1KE9 HFLKNSRTARCRAAMPVLKVAKRVILLSGTPAMSRPAELYTQIIAVKPTFFPQFHAFGLR
:..:. ..: : .:... :.:.:::.::::..:: ::. :: :. : : .. .. :
CCDS46 HYMKSRNATRSRILLPIVQKARRAILLTGTPALGRPEELFMQIEALFPQKFGRWTDYAKR
160 170 180 190 200 210
620 630 640 650 660
pF1KE9 YCDAKRMPWG----WDYSGSSNLGELKLLLEEAVMLRRLKSDVLSQLPAKQR-KIVVIAP
::.:. .: :: :.:::.::. :: . .:.::::..::.::: : : .: :
CCDS46 YCNAHIRYFGKRPQWDCRGASNLNELHQLLSD-IMIRRLKTEVLTQLPPKVRQRIPFDLP
220 230 240 250 260 270
670 680 690 700 710 720
pF1KE9 GRINARTRAALDAAAKEMTTKDKTKQQQKDALIL-FFNRTAEAKIPSVIEYILDLLESGR
. . .... : : : .. .. .:: .:..:: :: .: .:: .:..
CCDS46 SAAAKELNTSFEEWEKIMRTPNSGAMETVMGLITRMFKQTAIAKAGAVKDYIKMMLQNDS
280 290 300 310 320 330
730 740 750 760 770 780
pF1KE9 EKFLVFAHHKVVLDAITQELERKHVQHIRIDGSTSSAEREDLCQQFQLSERHAVAVLSIT
:::::::: .:.: :. . ......::::::.::.:: : .::: . ::.:::
CCDS46 LKFLVFAHHLSMLQACTEAVIENKTRYIRIDGSVSSSERIHLVNQFQKDPDTRVAILSIQ
340 350 360 370 380 390
790 800 810 820 830 840
pF1KE9 AANMGLTFSSADLVVFAELFWNPGVLIQAEDRVHRIGQTSSVGIHYLVAKGTADDYLWPL
::..::::..:. ::::::.:.:: . :::::.::::: :::.::::.:.:: : .: .
CCDS46 AAGQGLTFTAASHVVFAELYWDPGHIKQAEDRAHRIGQCSSVNIHYLIANGTLDTLMWGM
400 410 420 430 440 450
850 860 870 880 890 900
pF1KE9 IQEKIKVLAEAGLSETNFSEMTESTDYLYKDPKQQKIYDLFQKSFEKEGSDMELLEAAES
...: .:
CCDS46 LNRKAQVTGSTLNGRKEKIQAEEGDKEKWDFLQFAEAWTPNDSSEELRKEALFTHFEKEK
460 470 480 490 500 510
954 residues in 1 query sequences
18511270 residues in 32554 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Mon Nov 7 01:10:41 2016 done: Mon Nov 7 01:10:41 2016
Total Scan time: 4.020 Total Display time: 0.050
Function used was FASTA [36.3.4 Apr, 2011]