FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448

Query: pF1KE9623, 756 aa
  1>>>pF1KE9623 756 - 756 aa - 756 aa
Library: human.CCDS.faa
  18511270 residues in 32554 sequences

Statistics:  Expectation_n fit: rho(ln(x))= 5.7844+/-0.00105; mu= 17.3402+/- 0.063
 mean_var=68.2670+/-13.561, 0's: 0 Z-trim(103.0): 17  B-trim: 0 in 0/52
 Lambda= 0.155228
 statistics sampled from 7221 (7225) to 7221 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
 ktup: 2, E-join: 1 (0.589), E-opt: 0.2 (0.222), width:  16
 Scan time:  3.870

The best scores are:                                      opt bits E(32554)
CCDS14479.1 CENPI gene_id:2491|Hs108|chrX          ( 756) 5074 1146.0       0
CCDS83482.1 CENPI gene_id:2491|Hs108|chrX          ( 522) 3521 798.1       0


>>CCDS14479.1 CENPI gene_id:2491|Hs108|chrX               (756 aa)
 initn: 5074 init1: 5074 opt: 5074  Z-score: 6135.4  bits: 1146.0 E(32554):    0
Smith-Waterman score: 5074; 100.0% identity (100.0% similar) in 756 aa overlap (1-756:1-756)

               10        20        30        40        50        60
pF1KE9 MSPQKRVKNVQAQNRTSQGSSSFQTTLSAWKVKQDPSNSKNISKHGQNNPVGDYEHADDQ
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS14 MSPQKRVKNVQAQNRTSQGSSSFQTTLSAWKVKQDPSNSKNISKHGQNNPVGDYEHADDQ
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KE9 AEEDALQMAVGYFEKGPIKASQNKDKTLEKHLKTVENVAWKNGLASEEIDILLNIALSGK
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS14 AEEDALQMAVGYFEKGPIKASQNKDKTLEKHLKTVENVAWKNGLASEEIDILLNIALSGK
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KE9 FGNAVNTRILKCMIPATVISEDSVVKAVSWLCVGKCSGSTKVLFYRWLVAMFDFIDRKEQ
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS14 FGNAVNTRILKCMIPATVISEDSVVKAVSWLCVGKCSGSTKVLFYRWLVAMFDFIDRKEQ
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KE9 INLLYGFFFASLQDDALCPYVCHLLYLLTKKENVKPFRVRKLLDLQAKMGMQPHLQALLS
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS14 INLLYGFFFASLQDDALCPYVCHLLYLLTKKENVKPFRVRKLLDLQAKMGMQPHLQALLS
              190       200       210       220       230       240

              250       260       270       280       290       300
pF1KE9 LYKFFAPALISVSLPVRKKIYFKNSENLWKTALLAVKQRNRGPSPEPLKLMLGPANVRPL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS14 LYKFFAPALISVSLPVRKKIYFKNSENLWKTALLAVKQRNRGPSPEPLKLMLGPANVRPL
              250       260       270       280       290       300

              310       320       330       340       350       360
pF1KE9 KRKWNSLSVIPVLNSSSYTKECGKKEMSLSDCLNRSGSFPLEQLQSFPQLLQNIHCLELP
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS14 KRKWNSLSVIPVLNSSSYTKECGKKEMSLSDCLNRSGSFPLEQLQSFPQLLQNIHCLELP
              310       320       330       340       350       360

              370       380       390       400       410       420
pF1KE9 SQMGSVLNNSLLLHYINCVRDEPVLLRFYYWLSQTLQEECIWYKVNNYEHGKEFTNFLDT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS14 SQMGSVLNNSLLLHYINCVRDEPVLLRFYYWLSQTLQEECIWYKVNNYEHGKEFTNFLDT
              370       380       390       400       410       420

              430       440       450       460       470       480
pF1KE9 IIRAECFLQEGFYSCEAFLYKSLPLWDGLCCRSQFLQLVSWIPFSSFSEVKPLLFDHLAQ
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS14 IIRAECFLQEGFYSCEAFLYKSLPLWDGLCCRSQFLQLVSWIPFSSFSEVKPLLFDHLAQ
              430       440       450       460       470       480

              490       500       510       520       530       540
pF1KE9 LFFTSTIYFKCSVLQSLKELLQNWLLWLSMDIHMKPVTNSPLETTLGGSMNSVSKLIHYV
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS14 LFFTSTIYFKCSVLQSLKELLQNWLLWLSMDIHMKPVTNSPLETTLGGSMNSVSKLIHYV
              490       500       510       520       530       540

              550       560       570       580       590       600
pF1KE9 GWLSTTAMRLESNNTFLLHFILDFYEKVCDIYINYNLPLVVLFPPGIFYSALLSLDTSIL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS14 GWLSTTAMRLESNNTFLLHFILDFYEKVCDIYINYNLPLVVLFPPGIFYSALLSLDTSIL
              550       560       570       580       590       600

              610       620       630       640       650       660
pF1KE9 NQLCFIMHRYRKNLTAAKKNELVQKTKSEFNFSSKTYQEFNHYLTSMVGCLWTSKPFGKG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS14 NQLCFIMHRYRKNLTAAKKNELVQKTKSEFNFSSKTYQEFNHYLTSMVGCLWTSKPFGKG
              610       620       630       640       650       660

              670       680       690       700       710       720
pF1KE9 IYIDPEILEKTGVAEYKNSLNVVHHPSFLSYAVSFLLQESPEERTVNVSSIRGKKWSWYL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS14 IYIDPEILEKTGVAEYKNSLNVVHHPSFLSYAVSFLLQESPEERTVNVSSIRGKKWSWYL
              670       680       690       700       710       720

              730       740       750      
pF1KE9 DYLFSQGLQGLKLFIRSSVHHSSIPRAEGINCNNQY
       ::::::::::::::::::::::::::::::::::::
CCDS14 DYLFSQGLQGLKLFIRSSVHHSSIPRAEGINCNNQY
              730       740       750      

>>CCDS83482.1 CENPI gene_id:2491|Hs108|chrX               (522 aa)
 initn: 3521 init1: 3521 opt: 3521  Z-score: 4258.4  bits: 798.1 E(32554):    0
Smith-Waterman score: 3521; 100.0% identity (100.0% similar) in 522 aa overlap (1-522:1-522)

               10        20        30        40        50        60
pF1KE9 MSPQKRVKNVQAQNRTSQGSSSFQTTLSAWKVKQDPSNSKNISKHGQNNPVGDYEHADDQ
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS83 MSPQKRVKNVQAQNRTSQGSSSFQTTLSAWKVKQDPSNSKNISKHGQNNPVGDYEHADDQ
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KE9 AEEDALQMAVGYFEKGPIKASQNKDKTLEKHLKTVENVAWKNGLASEEIDILLNIALSGK
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS83 AEEDALQMAVGYFEKGPIKASQNKDKTLEKHLKTVENVAWKNGLASEEIDILLNIALSGK
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KE9 FGNAVNTRILKCMIPATVISEDSVVKAVSWLCVGKCSGSTKVLFYRWLVAMFDFIDRKEQ
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS83 FGNAVNTRILKCMIPATVISEDSVVKAVSWLCVGKCSGSTKVLFYRWLVAMFDFIDRKEQ
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KE9 INLLYGFFFASLQDDALCPYVCHLLYLLTKKENVKPFRVRKLLDLQAKMGMQPHLQALLS
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS83 INLLYGFFFASLQDDALCPYVCHLLYLLTKKENVKPFRVRKLLDLQAKMGMQPHLQALLS
              190       200       210       220       230       240

              250       260       270       280       290       300
pF1KE9 LYKFFAPALISVSLPVRKKIYFKNSENLWKTALLAVKQRNRGPSPEPLKLMLGPANVRPL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS83 LYKFFAPALISVSLPVRKKIYFKNSENLWKTALLAVKQRNRGPSPEPLKLMLGPANVRPL
              250       260       270       280       290       300

              310       320       330       340       350       360
pF1KE9 KRKWNSLSVIPVLNSSSYTKECGKKEMSLSDCLNRSGSFPLEQLQSFPQLLQNIHCLELP
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS83 KRKWNSLSVIPVLNSSSYTKECGKKEMSLSDCLNRSGSFPLEQLQSFPQLLQNIHCLELP
              310       320       330       340       350       360

              370       380       390       400       410       420
pF1KE9 SQMGSVLNNSLLLHYINCVRDEPVLLRFYYWLSQTLQEECIWYKVNNYEHGKEFTNFLDT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS83 SQMGSVLNNSLLLHYINCVRDEPVLLRFYYWLSQTLQEECIWYKVNNYEHGKEFTNFLDT
              370       380       390       400       410       420

              430       440       450       460       470       480
pF1KE9 IIRAECFLQEGFYSCEAFLYKSLPLWDGLCCRSQFLQLVSWIPFSSFSEVKPLLFDHLAQ
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS83 IIRAECFLQEGFYSCEAFLYKSLPLWDGLCCRSQFLQLVSWIPFSSFSEVKPLLFDHLAQ
              430       440       450       460       470       480

              490       500       510       520       530       540
pF1KE9 LFFTSTIYFKCSVLQSLKELLQNWLLWLSMDIHMKPVTNSPLETTLGGSMNSVSKLIHYV
       ::::::::::::::::::::::::::::::::::::::::::                  
CCDS83 LFFTSTIYFKCSVLQSLKELLQNWLLWLSMDIHMKPVTNSPL                  
              490       500       510       520                    

              550       560       570       580       590       600
pF1KE9 GWLSTTAMRLESNNTFLLHFILDFYEKVCDIYINYNLPLVVLFPPGIFYSALLSLDTSIL




756 residues in 1 query   sequences
18511270 residues in 32554 library sequences
 Tcomplib [36.3.4 Apr, 2011] (8 proc)
 start: Sun Nov  6 06:31:49 2016 done: Sun Nov  6 06:31:50 2016
 Total Scan time:  3.870 Total Display time:  0.040

Function used was FASTA [36.3.4 Apr, 2011]