Result of FASTA (omim) for
pFN21AE9536
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KE9536, 1215 aa
1>>>pF1KE9536 1215 - 1215 aa - 1215 aa
Library: /omim/omim.rfq.tfa
60827320 residues in 85289 sequences
Statistics: Expectation_n fit: rho(ln(x))= 8.4842+/-0.000433; mu= 6.6821+/- 0.027
mean_var=138.6450+/-27.594, 0's: 0 Z-trim(114.9): 79 B-trim: 216 in 1/52
Lambda= 0.108924
statistics sampled from 24881 (24956) to 24881 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.647), E-opt: 0.2 (0.293), width: 16
Scan time: 13.590
The best scores are: opt bits E(85289)
NP_065803 (OMIM: 614573) probable G-protein couple (1215) 8144 1292.4 0
XP_016871941 (OMIM: 614573) PREDICTED: probable G- ( 695) 4561 729.3 2.1e-209
NP_001004334 (OMIM: 614515,614565) probable G-prot (2367) 2035 332.4 2.1e-89
NP_000831 (OMIM: 601115) metabotropic glutamate re ( 879) 225 47.9 0.00035
>>NP_065803 (OMIM: 614573) probable G-protein coupled re (1215 aa)
initn: 8144 init1: 8144 opt: 8144 Z-score: 6919.2 bits: 1292.4 E(85289): 0
Smith-Waterman score: 8144; 99.9% identity (100.0% similar) in 1215 aa overlap (1-1215:1-1215)
10 20 30 40 50 60
pF1KE9 MGAMAYPLLLCLLLAQLGLGAVGASRDPQGRPDSPRERTPKGKPHAQQPGRASASDSSAP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_065 MGAMAYPLLLCLLLAQLGLGAVGASRDPQGRPDSPRERTPKGKPHAQQPGRASASDSSAP
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE9 WSRSTDGTILAQKLAEEVPMDVASYLYTGDSHQLKRANCSGRYELAGLPGKWPALASAHP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_065 WSRSTDGTILAQKLAEEVPMDVASYLYTGDSHQLKRANCSGRYELAGLPGKWPALASAHP
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE9 SLHRALDTLTHATNFLNVMLQSNKSREQNLQDDLDWYQALVWSLLEGEPSISRAAITFST
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_065 SLHRALDTLTHATNFLNVMLQSNKSREQNLQDDLDWYQALVWSLLEGEPSISRAAITFST
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE9 DSLSAPAPQVFLQATREESRILLQDLSSSAPHLANATLETEWFHGLRRKWRPHLHRRGPN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_065 DSLSAPAPQVFLQATREESRILLQDLSSSAPHLANATLETEWFHGLRRKWRPHLHRRGPN
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE9 QGPRGLGHSWRRKDGLGGDKSHFKWSPPYLECENGSYKPGWLVTLSSAIYGLQPNLVPEF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_065 QGPRGLGHSWRRKDGLGGDKSHFKWSPPYLECENGSYKPGWLVTLSSAIYGLQPNLVPEF
250 260 270 280 290 300
310 320 330 340 350 360
pF1KE9 RGVMKVDINLQKVDIDQCSSDGWFSGTHKCHLNNSECMPIKGLGFVLGAYECICKAGFYH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_065 RGVMKVDINLQKVDIDQCSSDGWFSGTHKCHLNNSECMPIKGLGFVLGAYECICKAGFYH
310 320 330 340 350 360
370 380 390 400 410 420
pF1KE9 PGVLPVNNFRRRGPDQHISGSTKDVSEEAYVCLPCREGCPFCADDSPCFVQEDKYLRLAI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_065 PGVLPVNNFRRRGPDQHISGSTKDVSEEAYVCLPCREGCPFCADDSPCFVQEDKYLRLAI
370 380 390 400 410 420
430 440 450 460 470 480
pF1KE9 ISFQGLCMLLDFVSMLVVYHFRKAKSIRASGLILLETILFGSLLLYFPVVILYFEPSTFR
::::.:::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_065 ISFQALCMLLDFVSMLVVYHFRKAKSIRASGLILLETILFGSLLLYFPVVILYFEPSTFR
430 440 450 460 470 480
490 500 510 520 530 540
pF1KE9 CILLRWARLLGFATVYGTVTLKLHRVLKVFLSRTAQRIPYMTGGRVMRMLAVILLVVFWF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_065 CILLRWARLLGFATVYGTVTLKLHRVLKVFLSRTAQRIPYMTGGRVMRMLAVILLVVFWF
490 500 510 520 530 540
550 560 570 580 590 600
pF1KE9 LIGWTSSVCQNLEKQISLIGQGKTSDHLIFNMCLIDRWDYMTAVAEFLFLLWGVYLCYAV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_065 LIGWTSSVCQNLEKQISLIGQGKTSDHLIFNMCLIDRWDYMTAVAEFLFLLWGVYLCYAV
550 560 570 580 590 600
610 620 630 640 650 660
pF1KE9 RTVPSAFHEPRYMAVAVHNELIISAIFHTIRFVLASRLQSDWMLMLYFAHTHLTVTVTIG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_065 RTVPSAFHEPRYMAVAVHNELIISAIFHTIRFVLASRLQSDWMLMLYFAHTHLTVTVTIG
610 620 630 640 650 660
670 680 690 700 710 720
pF1KE9 LLLIPKFSHSSNNPRDDIATEAYEDELDMGRSGSYLNSSINSAWSEHSLDPEDIRDELKK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_065 LLLIPKFSHSSNNPRDDIATEAYEDELDMGRSGSYLNSSINSAWSEHSLDPEDIRDELKK
670 680 690 700 710 720
730 740 750 760 770 780
pF1KE9 LYAQLEIYKRKKMITNNPHLQKKRCSKKGLGRSIMRRITEIPETVSRQCSKEDKEGADHG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_065 LYAQLEIYKRKKMITNNPHLQKKRCSKKGLGRSIMRRITEIPETVSRQCSKEDKEGADHG
730 740 750 760 770 780
790 800 810 820 830 840
pF1KE9 TAKGTALIRKNPPESSGNTGKSKEETLKNRVFSLKKSHSTYDHVRDQTEESSSLPTESQE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_065 TAKGTALIRKNPPESSGNTGKSKEETLKNRVFSLKKSHSTYDHVRDQTEESSSLPTESQE
790 800 810 820 830 840
850 860 870 880 890 900
pF1KE9 EETTENSTLESLSGKKLTQKLKEDSEAESTESVPLVCKSASAHNLSSEKKTGHPRTSMLQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_065 EETTENSTLESLSGKKLTQKLKEDSEAESTESVPLVCKSASAHNLSSEKKTGHPRTSMLQ
850 860 870 880 890 900
910 920 930 940 950 960
pF1KE9 KSLSVIASAKEKTLGLAGKTQTAGVEERTKSQKPLPKDKETNRNHSNSDNTETKDPAPQN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_065 KSLSVIASAKEKTLGLAGKTQTAGVEERTKSQKPLPKDKETNRNHSNSDNTETKDPAPQN
910 920 930 940 950 960
970 980 990 1000 1010 1020
pF1KE9 SNPAEEPRKPQKSGIMKQQRVNPTTANSDLNPGTTQMKDNFDIGEVCPWEVYDLTPGPVP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_065 SNPAEEPRKPQKSGIMKQQRVNPTTANSDLNPGTTQMKDNFDIGEVCPWEVYDLTPGPVP
970 980 990 1000 1010 1020
1030 1040 1050 1060 1070 1080
pF1KE9 SESKVQKHVSIVASEMEKNPTFSLKEKSHHKPKAAEVCQQSNQKRIDKAEVCLWESQGQS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_065 SESKVQKHVSIVASEMEKNPTFSLKEKSHHKPKAAEVCQQSNQKRIDKAEVCLWESQGQS
1030 1040 1050 1060 1070 1080
1090 1100 1110 1120 1130 1140
pF1KE9 ILEDEKLLISKTPVLPERAKEENGGQPRAANVCAGQSEELPPKAVASKTENENLNQIGHQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_065 ILEDEKLLISKTPVLPERAKEENGGQPRAANVCAGQSEELPPKAVASKTENENLNQIGHQ
1090 1100 1110 1120 1130 1140
1150 1160 1170 1180 1190 1200
pF1KE9 EKKTSSSEENVRGSYNSSNNFQQPLTSRAEVCPWEFETPAQPNAGRSVALPASSALSANK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_065 EKKTSSSEENVRGSYNSSNNFQQPLTSRAEVCPWEFETPAQPNAGRSVALPASSALSANK
1150 1160 1170 1180 1190 1200
1210
pF1KE9 IAGPRKEEIWDSFKV
:::::::::::::::
NP_065 IAGPRKEEIWDSFKV
1210
>>XP_016871941 (OMIM: 614573) PREDICTED: probable G-prot (695 aa)
initn: 4561 init1: 4561 opt: 4561 Z-score: 3880.3 bits: 729.3 E(85289): 2.1e-209
Smith-Waterman score: 4561; 100.0% identity (100.0% similar) in 695 aa overlap (521-1215:1-695)
500 510 520 530 540 550
pF1KE9 GFATVYGTVTLKLHRVLKVFLSRTAQRIPYMTGGRVMRMLAVILLVVFWFLIGWTSSVCQ
::::::::::::::::::::::::::::::
XP_016 MTGGRVMRMLAVILLVVFWFLIGWTSSVCQ
10 20 30
560 570 580 590 600 610
pF1KE9 NLEKQISLIGQGKTSDHLIFNMCLIDRWDYMTAVAEFLFLLWGVYLCYAVRTVPSAFHEP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 NLEKQISLIGQGKTSDHLIFNMCLIDRWDYMTAVAEFLFLLWGVYLCYAVRTVPSAFHEP
40 50 60 70 80 90
620 630 640 650 660 670
pF1KE9 RYMAVAVHNELIISAIFHTIRFVLASRLQSDWMLMLYFAHTHLTVTVTIGLLLIPKFSHS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 RYMAVAVHNELIISAIFHTIRFVLASRLQSDWMLMLYFAHTHLTVTVTIGLLLIPKFSHS
100 110 120 130 140 150
680 690 700 710 720 730
pF1KE9 SNNPRDDIATEAYEDELDMGRSGSYLNSSINSAWSEHSLDPEDIRDELKKLYAQLEIYKR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 SNNPRDDIATEAYEDELDMGRSGSYLNSSINSAWSEHSLDPEDIRDELKKLYAQLEIYKR
160 170 180 190 200 210
740 750 760 770 780 790
pF1KE9 KKMITNNPHLQKKRCSKKGLGRSIMRRITEIPETVSRQCSKEDKEGADHGTAKGTALIRK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 KKMITNNPHLQKKRCSKKGLGRSIMRRITEIPETVSRQCSKEDKEGADHGTAKGTALIRK
220 230 240 250 260 270
800 810 820 830 840 850
pF1KE9 NPPESSGNTGKSKEETLKNRVFSLKKSHSTYDHVRDQTEESSSLPTESQEEETTENSTLE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 NPPESSGNTGKSKEETLKNRVFSLKKSHSTYDHVRDQTEESSSLPTESQEEETTENSTLE
280 290 300 310 320 330
860 870 880 890 900 910
pF1KE9 SLSGKKLTQKLKEDSEAESTESVPLVCKSASAHNLSSEKKTGHPRTSMLQKSLSVIASAK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 SLSGKKLTQKLKEDSEAESTESVPLVCKSASAHNLSSEKKTGHPRTSMLQKSLSVIASAK
340 350 360 370 380 390
920 930 940 950 960 970
pF1KE9 EKTLGLAGKTQTAGVEERTKSQKPLPKDKETNRNHSNSDNTETKDPAPQNSNPAEEPRKP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 EKTLGLAGKTQTAGVEERTKSQKPLPKDKETNRNHSNSDNTETKDPAPQNSNPAEEPRKP
400 410 420 430 440 450
980 990 1000 1010 1020 1030
pF1KE9 QKSGIMKQQRVNPTTANSDLNPGTTQMKDNFDIGEVCPWEVYDLTPGPVPSESKVQKHVS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 QKSGIMKQQRVNPTTANSDLNPGTTQMKDNFDIGEVCPWEVYDLTPGPVPSESKVQKHVS
460 470 480 490 500 510
1040 1050 1060 1070 1080 1090
pF1KE9 IVASEMEKNPTFSLKEKSHHKPKAAEVCQQSNQKRIDKAEVCLWESQGQSILEDEKLLIS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 IVASEMEKNPTFSLKEKSHHKPKAAEVCQQSNQKRIDKAEVCLWESQGQSILEDEKLLIS
520 530 540 550 560 570
1100 1110 1120 1130 1140 1150
pF1KE9 KTPVLPERAKEENGGQPRAANVCAGQSEELPPKAVASKTENENLNQIGHQEKKTSSSEEN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 KTPVLPERAKEENGGQPRAANVCAGQSEELPPKAVASKTENENLNQIGHQEKKTSSSEEN
580 590 600 610 620 630
1160 1170 1180 1190 1200 1210
pF1KE9 VRGSYNSSNNFQQPLTSRAEVCPWEFETPAQPNAGRSVALPASSALSANKIAGPRKEEIW
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 VRGSYNSSNNFQQPLTSRAEVCPWEFETPAQPNAGRSVALPASSALSANKIAGPRKEEIW
640 650 660 670 680 690
pF1KE9 DSFKV
:::::
XP_016 DSFKV
>>NP_001004334 (OMIM: 614515,614565) probable G-protein (2367 aa)
initn: 2134 init1: 1626 opt: 2035 Z-score: 1726.2 bits: 332.4 E(85289): 2.1e-89
Smith-Waterman score: 2451; 39.4% identity (64.3% similar) in 1157 aa overlap (77-1196:50-1144)
50 60 70 80 90 100
pF1KE9 QQPGRASASDSSAPWSRSTDGTILAQKLAEEVPMDVA----SYLYTGDSHQLKRANCSGR
.::.. : .:::.::..::...::: :
NP_001 FVCAWALGGPRPIRSLPPLSSQVKPGSVPMQVPLEGAEAALAYLYSGDAQQLSQVNCSER
20 30 40 50 60 70
110 120 130 140 150 160
pF1KE9 YELAGLPGKWPALASAHPSLHRALDTLTHATNFLNVMLQSNKSREQNLQDDLDWYQALVW
:: : : :.: :::. : ::..:.::::..::.: ::.....:..::::::
NP_001 YEARG-AGAMPGLP---PSLQGAAGTLAQAANFLNMLLQANDIRESSVEEDVEWYQALVR
80 90 100 110 120 130
170 180 190 200 210 220
pF1KE9 SLLEGEPSISRAAITFSTDSLSAPAPQVFLQATREESRILLQDLSSSAPHLANATLETEW
:. ::.: . :: .::. .: :. ::::: . .:::::.. . : . .
NP_001 SVAEGDPRVYRALLTFNPPP-GASHLQLALQATRTGEETILQDLSGNWVQEENPPGDLD-
140 150 160 170 180 190
230 240 250 260 270 280
pF1KE9 FHGLRRKWRPHLHRRGPNQGPRGLGH-SWRRKDGLGGDKSHFKWSPPYLECENGSYKPGW
: :..: .. .:: .: . :: :: .. . :::.:::..: .:::
NP_001 --------TPALKKRVLTNDLGSLGSPKWPQADGYVGDTQQVRLSPPFLECQEGRLRPGW
200 210 220 230 240
290 300 310 320 330 340
pF1KE9 LVTLSSAIYGLQPNLVPEFRGVMKVDINLQKVDIDQCSSD-GWFSGTHKCHLNNSECMPI
:.:::...:::.:.: :: :: ...:..::.:::.::.: ::.:.:: : ::...:.:.
NP_001 LITLSATFYGLKPDLSPEVRGQVQMDVDLQSVDINQCASGPGWYSNTHLCDLNSTQCVPL
250 260 270 280 290 300
350 360 370 380 390
pF1KE9 KGLGFVLGAYECICKAGFY--HP-GVLPVNNFRRRGPDQHISGSTKDVSEEAYVCLPCRE
.. ::::: : : :. ::: : : : ..:. : : : . : . :::: :
NP_001 ESQGFVLGRYLCRCRPGFYGASPSGGLEESDFQTTG--QF--GFPEGRSGRLLQCLPCPE
310 320 330 340 350 360
400 410 420 430 440 450
pF1KE9 GCPFCADDSPCFVQEDKYLRLAIISFQGLCMLLDFVSMLVVYHFRKAKSIRASGLILLET
:: : : .::.:.: :: :... :. ::: :.:::: :. :. : : :::..::::
NP_001 GCTSCMDATPCLVEEAAVLRAAVLACQACCMLAIFLSMLVSYRCRRNKRIWASGVVLLET
370 380 390 400 410 420
460 470 480 490 500 510
pF1KE9 ILFGSLLLYFPVVILYFEPSTFRCILLRWARLLGFATVYGTVTLKLHRVLKVFLSRTAQR
.::: ::::::: ::::.::.:::: :::.:::::: ::::. :::.:::..::::::::
NP_001 VLFGFLLLYFPVFILYFKPSVFRCIALRWVRLLGFAIVYGTIILKLYRVLQLFLSRTAQR
430 440 450 460 470 480
520 530 540 550 560 570
pF1KE9 IPYMTGGRVMRMLAVILLVVFWFLIGWTSSVCQNLEKQISLIGQGKTSDHLIFNMCLIDR
...::..: :...:: :. :: :: .. . .. :. .:.: . : .: ::
NP_001 SALLSSGRLLRHLGLLLLPVLGFLAVWTVGALERGIQHAPLVIRGHTPSGRHFYLCHHDR
490 500 510 520 530 540
580 590 600 610 620 630
pF1KE9 WDYMTAVAEFLFLLWGVYLCYAVRTVPSAFHEPRYMAVAVHNELIISAIFHTIRFVLASR
:::. .:::.:.: :: .::::.:.: :::::::::..:.::::..:: ::: ::::.
NP_001 WDYIMVVAELLLLCWGSFLCYATRAVLSAFHEPRYMGIALHNELLLSAAFHTARFVLVPS
550 560 570 580 590 600
640 650 660 670 680 690
pF1KE9 LQSDWMLMLYFAHTHLTVTVTIGLLLIPKFSHSSNNPRDDIATEAYEDELDMGRSGSYLN
:. :: :.:.: ::: :::.:..:..:::: . . ::.... :. :::::. .:::::.
NP_001 LHPDWTLLLFFFHTHSTVTTTLALIFIPKFWKLGAPPREEMVDEVCEDELDLQHSGSYLG
610 620 630 640 650 660
700 710 720 730 740 750
pF1KE9 SSINSAWSEHSLDPEDIRDELKKLYAQLEIYKRKKMITNNPHLQKKRCSK-KGLGRSIMR
::: :::::::::: ::::::::::::::..: :.: .::::: ::: :. .:::::.::
NP_001 SSIASAWSEHSLDPGDIRDELKKLYAQLEVHKTKEMAANNPHLPKKRGSSCQGLGRSFMR
670 680 690 700 710 720
760 770 780 790 800 810
pF1KE9 RITEIPETVSRQCSKEDKEGADHGTAKGTALIRKNPPESSGNTGKSKEETLKNRVFSLKK
..:.::...:: :. :. . ::. :.. :. :: . .. .:.:
NP_001 YLAEFPEALARQHSR-DSGSPGHGSLPGSS--RRRLLSSSLQEPEGTP--------ALHK
730 740 750 760 770
820 830 840 850 860 870
pF1KE9 SHSTYDHVRDQTEESSSLPTESQEEETTENSTLESLSGKKLTQKLKEDSEAESTESVP-L
:.::::. :.: . :.:: .::..: .. ::.:. : :
NP_001 SRSTYDQRREQ-----------------DPPLLDSLLRRKLAKKASRTESRESVEGPPAL
780 790 800 810
880 890 900 910 920
pF1KE9 VCKSASAHNLSSEKKTGHPRTSMLQKSLSVIASAKEKTLGLAGKT-------QTAGVEER
.:::::::. .. . : . ::::::: ::..::.: .:... :. :::
NP_001 GFRSASAHNLTVGERLPRARPASLQKSLSV-ASSREKALLMASQAYLEETYRQAKEREER
820 830 840 850 860 870
930 940 950 960 970
pF1KE9 TKSQKPLP---KDKETNRNHSNSDNTETKDPAPQNSNPA----------EEPRKPQKSGI
:.. . . . : . . :.: .:. . :: :.
NP_001 KKAKAAMASLVRRPSARRLERPRGAPLSAPPSPAKSSSVDSSHTSGRLHEEARRRLPHPP
880 890 900 910 920 930
980 990 1000 1010 1020 1030
pF1KE9 MKQQRVNPTTANSDLNPGTTQMKDNFDIGEVCPWEVYDLTPGPVPSESKV--QKHVSIVA
...: .: : :. : . . . . : . :.: :.:. . : . . .
NP_001 IRHQVSTPILA---LSGGLGEPRMLSPTSTLAPALLPALAPTPAPALAPVPVSPQSPNLL
940 950 960 970 980
1040 1050 1060 1070 1080 1090
pF1KE9 SEMEKNPTFSLKEKSHHKPKAAEVCQQSNQKRIDKAEVCLWESQGQSILEDEKLLISKTP
. . . : :... :. . . ... :.. ::.. . . . :.
NP_001 TYICPWENAELPAKQENVPQEGPSGPERGHHSPAPARARLWRALS--------VAVEKSR
990 1000 1010 1020 1030 1040
1100 1110 1120 1130 1140 1150
pF1KE9 VLPERAKEENGGQPRAANVCAGQSEELPPKAVASKT--ENENLNQIGHQEKKTSSSEENV
. .. :.. . : :: . .. ::. . :. .. .. ..: : . :
NP_001 AGENEMDAEDAHHQREANDVDEDRPKIFPKSHSLKAPVQQGSMRSLGLAIKALTRS----
1050 1060 1070 1080 1090
1160 1170 1180 1190 1200
pF1KE9 RGSYNSSNNFQQ-PLTSRAEVCPWEFETPAQ-PNAGRSVALPASSALSANKIAGPRKEEI
:..: ... .. : . . . . .:.. : :: :. ..::
NP_001 RSTYREKESVEESPEGQNSGTAGESMGAPSRSPRLGRPKAVSKQAALIPSDDKESLQNQQ
1100 1110 1120 1130 1140 1150
1210
pF1KE9 WDSFKV
NP_001 NAHTSRMLQVCQREGSREQEDRGRRMTQGLGERKAERAGKTGLAMLRQVSRDKNIKQSKE
1160 1170 1180 1190 1200 1210
>>NP_000831 (OMIM: 601115) metabotropic glutamate recept (879 aa)
initn: 85 init1: 85 opt: 225 Z-score: 196.1 bits: 47.9 E(85289): 0.00035
Smith-Waterman score: 225; 22.3% identity (53.5% similar) in 346 aa overlap (388-716:542-873)
360 370 380 390 400 410
pF1KE9 FYHPGVLPVNNFRRRGPDQHISGSTKDVSEEAYVCLPCREGCPFCADDSPCFVQEDKYLR
. ..:. : : :: . :. . :.:
NP_000 PCAPNEMKNMQPGDVCCWICIPCEPYEYLADEFTCMDCGSGQWPTADLTGCYDLPEDYIR
520 530 540 550 560 570
420 430 440 450 460 470
pF1KE9 L----AIISFQGLCMLLDFVSMLVVYHFRKAKS--IRASGLILLETILFGSLLLYFPVVI
:: :. . . :.:. ... .. ..::: : .::: : : . .
NP_000 WEDAWAIGPVTIACLGFMCTCMVVTVFIKHNNTPLVKASGRELCYILLFGVGLSYCMTFF
580 590 600 610 620 630
480 490 500 510 520
pF1KE9 LYFEPSTFRCILLRWARLLGFATVYGTVTLKLHRVLKVF--LSRTAQRIPYMT-GGRVMR
. .:: : : : . .:: :... : . . ..: .. ::: ... ...:.
NP_000 FIAKPSPVICALRRLGLGSSFAICYSALLTKTNCIARIFDGVKNGAQRPKFISPSSQVFI
640 650 660 670 680 690
530 540 550 560 570 580
pF1KE9 MLAVIL----LVVFWFLIGWTSSVCQNL-EKQISLIGQGKTSDHLIFNMCLIDRWDYMTA
:..:: .: :... .. .: ::. ..: . ...: .: . .: .
NP_000 CLGLILVQIVMVSVWLILEAPGTRRYTLAEKRETVILKCNVKDS---SMLISLTYDVI--
700 710 720 730 740
590 600 610 620 630 640
pF1KE9 VAEFLFLLWGVYLCYAVRTVPSAFHEPRYMAVAVHNELIISAIFHTIRFVLAS--RLQSD
: .: :: . .: : :.: .... .... :: : : .: .: :.:.
NP_000 ----LVILCTVY-AFKTRKCPENFNEAKFIGFTMYTTCIIWLAFLPIFYVTSSDYRVQTT
750 760 770 780 790 800
650 660 670 680 690 700
pF1KE9 WMLMLYFAHTHLTVTVTIGLLLIPKFSHSSNNPRDDIATEAYE-DELDMGRSGSYLNSSI
: . . :. :..: :. :: .:. ...:. . ...... .:. ..:
NP_000 TMCI----SVSLSGFVVLGCLFAPKVHIILFQPQKNVVTHRLHLNRFSVSGTGTTYSQSS
810 820 830 840 850
710 720 730 740 750 760
pF1KE9 NSAWSEHSLDPEDIRDELKKLYAQLEIYKRKKMITNNPHLQKKRCSKKGLGRSIMRRITE
:.. . ... :
NP_000 ASTYVPTVCNGREVLDSTTSSL
860 870
1215 residues in 1 query sequences
60827320 residues in 85289 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Mon Nov 7 18:45:38 2016 done: Mon Nov 7 18:45:40 2016
Total Scan time: 13.590 Total Display time: 0.130
Function used was FASTA [36.3.4 Apr, 2011]