Result of FASTA (omim) for
pFN21AE9519
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KE9519, 358 aa
1>>>pF1KE9519 358 - 358 aa - 358 aa
Library: /omim/omim.rfq.tfa
60827320 residues in 85289 sequences
Statistics: Expectation_n fit: rho(ln(x))= 4.8729+/-0.000327; mu= 20.0055+/- 0.020
mean_var=96.3554+/-22.204, 0's: 0 Z-trim(116.7): 472 B-trim: 2967 in 2/51
Lambda= 0.130658
statistics sampled from 27555 (28124) to 27555 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.687), E-opt: 0.2 (0.33), width: 16
Scan time: 9.090
The best scores are: opt bits E(85289)
NP_001158164 (OMIM: 605773) leukotriene B4 recepto ( 358) 2397 462.1 8.8e-130
NP_062813 (OMIM: 605773) leukotriene B4 receptor 2 ( 358) 2397 462.1 8.8e-130
NP_001137391 (OMIM: 601531) leukotriene B4 recepto ( 352) 790 159.1 1.3e-38
NP_858043 (OMIM: 601531) leukotriene B4 receptor 1 ( 352) 790 159.1 1.3e-38
NP_003941 (OMIM: 602779) proteinase-activated rece ( 385) 416 88.7 2.4e-17
NP_057686 (OMIM: 600240) C-C chemokine receptor ty ( 362) 412 87.9 3.8e-17
NP_001495 (OMIM: 300574) C-X-C chemokine receptor ( 368) 409 87.3 5.7e-17
XP_005262313 (OMIM: 300574) PREDICTED: C-X-C chemo ( 378) 409 87.4 5.8e-17
NP_001136269 (OMIM: 300574) C-X-C chemokine recept ( 415) 409 87.4 6.2e-17
XP_016884924 (OMIM: 300574) PREDICTED: C-X-C chemo ( 415) 409 87.4 6.2e-17
NP_005289 (OMIM: 602174) probable G-protein couple ( 361) 396 84.9 3.1e-16
NP_001044 (OMIM: 182455) somatostatin receptor typ ( 364) 373 80.5 6.3e-15
NP_001166031 (OMIM: 182455) somatostatin receptor ( 364) 373 80.5 6.3e-15
NP_000902 (OMIM: 165195) delta-type opioid recepto ( 372) 367 79.4 1.4e-14
NP_061822 (OMIM: 600896) urotensin-2 receptor [Hom ( 389) 359 77.9 4.1e-14
NP_001040 (OMIM: 182451) somatostatin receptor typ ( 391) 356 77.4 6.1e-14
NP_001258679 (OMIM: 609949) C5a anaphylatoxin chem ( 337) 353 76.7 8.2e-14
NP_060955 (OMIM: 609949) C5a anaphylatoxin chemota ( 337) 353 76.7 8.2e-14
XP_011525038 (OMIM: 609949) PREDICTED: C5a anaphyl ( 337) 353 76.7 8.2e-14
NP_001258678 (OMIM: 609949) C5a anaphylatoxin chem ( 337) 353 76.7 8.2e-14
NP_003458 (OMIM: 162643,193670) C-X-C chemokine re ( 352) 352 76.6 9.6e-14
NP_001008540 (OMIM: 162643,193670) C-X-C chemokine ( 356) 352 76.6 9.6e-14
XP_005260196 (OMIM: 602779) PREDICTED: proteinase- ( 273) 344 74.9 2.3e-13
NP_871001 (OMIM: 609043) relaxin-3 receptor 2 [Hom ( 374) 344 75.1 2.8e-13
NP_001043 (OMIM: 182454) somatostatin receptor typ ( 388) 339 74.2 5.6e-13
NP_006632 (OMIM: 604738) C-C chemokine receptor ty ( 357) 338 73.9 6e-13
NP_001243298 (OMIM: 604738) C-C chemokine receptor ( 357) 338 73.9 6e-13
XP_011531614 (OMIM: 604738) PREDICTED: C-C chemoki ( 369) 338 74.0 6.1e-13
NP_112477 (OMIM: 604738) C-C chemokine receptor ty ( 369) 338 74.0 6.1e-13
NP_001727 (OMIM: 113995) C5a anaphylatoxin chemota ( 350) 330 72.4 1.7e-12
NP_001248384 (OMIM: 600239) G-protein coupled rece ( 355) 326 71.7 2.9e-12
NP_001248381 (OMIM: 600239) G-protein coupled rece ( 355) 326 71.7 2.9e-12
NP_001248383 (OMIM: 600239) G-protein coupled rece ( 355) 326 71.7 2.9e-12
NP_005270 (OMIM: 600239) G-protein coupled recepto ( 355) 326 71.7 2.9e-12
NP_001248382 (OMIM: 600239) G-protein coupled rece ( 355) 326 71.7 2.9e-12
XP_016859321 (OMIM: 600239) PREDICTED: G-protein c ( 355) 326 71.7 2.9e-12
XP_005246528 (OMIM: 600239) PREDICTED: G-protein c ( 355) 326 71.7 2.9e-12
NP_001091669 (OMIM: 600239) G-protein coupled rece ( 355) 326 71.7 2.9e-12
NP_001288647 (OMIM: 600242) C-C chemokine receptor ( 372) 326 71.7 3e-12
NP_001288646 (OMIM: 600242) C-C chemokine receptor ( 372) 326 71.7 3e-12
NP_001288645 (OMIM: 600242) C-C chemokine receptor ( 372) 326 71.7 3e-12
NP_001829 (OMIM: 600242) C-C chemokine receptor ty ( 378) 326 71.7 3e-12
NP_005290 (OMIM: 602043) 12-(S)-hydroxy-5,8,10,14- ( 319) 323 71.1 4e-12
NP_001154889 (OMIM: 603071) uracil nucleotide/cyst ( 339) 323 71.1 4.1e-12
NP_001154888 (OMIM: 603071) uracil nucleotide/cyst ( 339) 323 71.1 4.1e-12
XP_016859322 (OMIM: 603071) PREDICTED: uracil nucl ( 367) 323 71.1 4.3e-12
NP_001154887 (OMIM: 603071) uracil nucleotide/cyst ( 367) 323 71.1 4.3e-12
NP_005282 (OMIM: 603071) uracil nucleotide/cystein ( 367) 323 71.1 4.3e-12
NP_001288643 (OMIM: 600242) C-C chemokine receptor ( 315) 319 70.3 6.7e-12
NP_002556 (OMIM: 300038) P2Y purinoceptor 4 [Homo ( 365) 319 70.4 7.3e-12
>>NP_001158164 (OMIM: 605773) leukotriene B4 receptor 2 (358 aa)
initn: 2397 init1: 2397 opt: 2397 Z-score: 2451.0 bits: 462.1 E(85289): 8.8e-130
Smith-Waterman score: 2397; 100.0% identity (100.0% similar) in 358 aa overlap (1-358:1-358)
10 20 30 40 50 60
pF1KE9 MSVCYRPPGNETLLSWKTSRATGTAFLLLAALLGLPGNGFVVWSLAGWRPARGRPLAATL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MSVCYRPPGNETLLSWKTSRATGTAFLLLAALLGLPGNGFVVWSLAGWRPARGRPLAATL
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE9 VLHLALADGAVLLLTPLFVAFLTRQAWPLGQAGCKAVYYVCALSMYASVLLTGLLSLQRC
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 VLHLALADGAVLLLTPLFVAFLTRQAWPLGQAGCKAVYYVCALSMYASVLLTGLLSLQRC
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE9 LAVTRPFLAPRLRSPALARRLLLAVWLAALLLAVPAAVYRHLWRDRVCQLCHPSPVHAAA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 LAVTRPFLAPRLRSPALARRLLLAVWLAALLLAVPAAVYRHLWRDRVCQLCHPSPVHAAA
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE9 HLSLETLTAFVLPFGLMLGCYSVTLARLRGARWGSGRHGARVGRLVSAIVLAFGLLWAPY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 HLSLETLTAFVLPFGLMLGCYSVTLARLRGARWGSGRHGARVGRLVSAIVLAFGLLWAPY
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE9 HAVNLLQAVAALAPPEGALAKLGGAGQAARAGTTALAFFSSSVNPVLYVFTAGDLLPRAG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 HAVNLLQAVAALAPPEGALAKLGGAGQAARAGTTALAFFSSSVNPVLYVFTAGDLLPRAG
250 260 270 280 290 300
310 320 330 340 350
pF1KE9 PRFLTRLFEGSGEARGGGRSREGTMELRTTPQLKVVGQGRGNGDPGGGMEKDGPEWDL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 PRFLTRLFEGSGEARGGGRSREGTMELRTTPQLKVVGQGRGNGDPGGGMEKDGPEWDL
310 320 330 340 350
>>NP_062813 (OMIM: 605773) leukotriene B4 receptor 2 [Ho (358 aa)
initn: 2397 init1: 2397 opt: 2397 Z-score: 2451.0 bits: 462.1 E(85289): 8.8e-130
Smith-Waterman score: 2397; 100.0% identity (100.0% similar) in 358 aa overlap (1-358:1-358)
10 20 30 40 50 60
pF1KE9 MSVCYRPPGNETLLSWKTSRATGTAFLLLAALLGLPGNGFVVWSLAGWRPARGRPLAATL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_062 MSVCYRPPGNETLLSWKTSRATGTAFLLLAALLGLPGNGFVVWSLAGWRPARGRPLAATL
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE9 VLHLALADGAVLLLTPLFVAFLTRQAWPLGQAGCKAVYYVCALSMYASVLLTGLLSLQRC
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_062 VLHLALADGAVLLLTPLFVAFLTRQAWPLGQAGCKAVYYVCALSMYASVLLTGLLSLQRC
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE9 LAVTRPFLAPRLRSPALARRLLLAVWLAALLLAVPAAVYRHLWRDRVCQLCHPSPVHAAA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_062 LAVTRPFLAPRLRSPALARRLLLAVWLAALLLAVPAAVYRHLWRDRVCQLCHPSPVHAAA
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE9 HLSLETLTAFVLPFGLMLGCYSVTLARLRGARWGSGRHGARVGRLVSAIVLAFGLLWAPY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_062 HLSLETLTAFVLPFGLMLGCYSVTLARLRGARWGSGRHGARVGRLVSAIVLAFGLLWAPY
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE9 HAVNLLQAVAALAPPEGALAKLGGAGQAARAGTTALAFFSSSVNPVLYVFTAGDLLPRAG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_062 HAVNLLQAVAALAPPEGALAKLGGAGQAARAGTTALAFFSSSVNPVLYVFTAGDLLPRAG
250 260 270 280 290 300
310 320 330 340 350
pF1KE9 PRFLTRLFEGSGEARGGGRSREGTMELRTTPQLKVVGQGRGNGDPGGGMEKDGPEWDL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_062 PRFLTRLFEGSGEARGGGRSREGTMELRTTPQLKVVGQGRGNGDPGGGMEKDGPEWDL
310 320 330 340 350
>>NP_001137391 (OMIM: 601531) leukotriene B4 receptor 1 (352 aa)
initn: 716 init1: 379 opt: 790 Z-score: 814.0 bits: 159.1 E(85289): 1.3e-38
Smith-Waterman score: 796; 45.7% identity (71.1% similar) in 322 aa overlap (25-331:21-336)
10 20 30 40 50
pF1KE9 MSVCYRPPGNETLLSWKTSRATGTAFLLLAALL--GLPGNGFVVWSLAGWRPARGRPLAA
:..::.. : :::::.:::::. . . : ..:
NP_001 MNTTSSAAPPSLGVEFISLLAIILLSVALAVGLPGNSFVVWSI--LKRMQKRSVTA
10 20 30 40 50
60 70 80 90 100 110
pF1KE9 TLVLHLALADGAVLLLTPLFVAFLTRQAWPLGQAGCKAVYYVCALSMYASVLLTGLLSLQ
.::.::::: :::: .:.:. ::.. .: .: :::. .:::..:::::::: .::.
NP_001 LMVLNLALADLAVLLTAPFFLHFLAQGTWSFGLAGCRLCHYVCGVSMYASVLLITAMSLD
60 70 80 90 100 110
120 130 140 150 160 170
pF1KE9 RCLAVTRPFLAPRLRSPALARRLLLAVWLAALLLAVPAAVYRHL--WRDRVCQLC---HP
: :::.:::.. .::. :.:::.: ..:. ..:::.:. .:: . :. . .:: .:
NP_001 RSLAVARPFVSQKLRTKAMARRVLAGIWVLSFLLATPVLAYRTVVPWKTNM-SLCFPRYP
120 130 140 150 160 170
180 190 200 210 220 230
pF1KE9 SPVHAAAHLSLETLTAFVLPFGLMLGCYSVTLARLRGARWGSGRHGARVGRLVSAIVLAF
: : : :: .:..:.:.::: ... :: ::.. :. :.. :.:::: :.:.:
NP_001 SEGHRAFHLIFEAVTGFLLPFLAVVASYSDIGRRLQARRF---RRSRRTGRLVVLIILTF
180 190 200 210 220 230
240 250 260 270 280 290
pF1KE9 GLLWAPYHAVNLLQAVAALAPPEGALAKLGGAGQAARAGTTALAFFSSSVNPVLYVFTAG
. .: :::.::: .: ::: ..:. .: . :: ::::.:::::::::. ..:
NP_001 AAFWLPYHVVNLAEAGRALAGQAAGLGLVGKRLSLARNVLIALAFLSSSVNPVLYACAGG
240 250 260 270 280 290
300 310 320 330 340
pF1KE9 DLLPRAGPRFLTRLFEGSG-EA----RGG--GRS-REGTMELRTTPQLKVVGQGRGNGDP
:: :: :...:.::.: :: ::: :.. : : :. :
NP_001 GLLRSAGVGFVAKLLEGTGSEASSTRRGGSLGQTARSGPAALEPGPSESLTASSPLKLNE
300 310 320 330 340 350
350
pF1KE9 GGGMEKDGPEWDL
NP_001 LN
>>NP_858043 (OMIM: 601531) leukotriene B4 receptor 1 [Ho (352 aa)
initn: 716 init1: 379 opt: 790 Z-score: 814.0 bits: 159.1 E(85289): 1.3e-38
Smith-Waterman score: 796; 45.7% identity (71.1% similar) in 322 aa overlap (25-331:21-336)
10 20 30 40 50
pF1KE9 MSVCYRPPGNETLLSWKTSRATGTAFLLLAALL--GLPGNGFVVWSLAGWRPARGRPLAA
:..::.. : :::::.:::::. . . : ..:
NP_858 MNTTSSAAPPSLGVEFISLLAIILLSVALAVGLPGNSFVVWSI--LKRMQKRSVTA
10 20 30 40 50
60 70 80 90 100 110
pF1KE9 TLVLHLALADGAVLLLTPLFVAFLTRQAWPLGQAGCKAVYYVCALSMYASVLLTGLLSLQ
.::.::::: :::: .:.:. ::.. .: .: :::. .:::..:::::::: .::.
NP_858 LMVLNLALADLAVLLTAPFFLHFLAQGTWSFGLAGCRLCHYVCGVSMYASVLLITAMSLD
60 70 80 90 100 110
120 130 140 150 160 170
pF1KE9 RCLAVTRPFLAPRLRSPALARRLLLAVWLAALLLAVPAAVYRHL--WRDRVCQLC---HP
: :::.:::.. .::. :.:::.: ..:. ..:::.:. .:: . :. . .:: .:
NP_858 RSLAVARPFVSQKLRTKAMARRVLAGIWVLSFLLATPVLAYRTVVPWKTNM-SLCFPRYP
120 130 140 150 160 170
180 190 200 210 220 230
pF1KE9 SPVHAAAHLSLETLTAFVLPFGLMLGCYSVTLARLRGARWGSGRHGARVGRLVSAIVLAF
: : : :: .:..:.:.::: ... :: ::.. :. :.. :.:::: :.:.:
NP_858 SEGHRAFHLIFEAVTGFLLPFLAVVASYSDIGRRLQARRF---RRSRRTGRLVVLIILTF
180 190 200 210 220 230
240 250 260 270 280 290
pF1KE9 GLLWAPYHAVNLLQAVAALAPPEGALAKLGGAGQAARAGTTALAFFSSSVNPVLYVFTAG
. .: :::.::: .: ::: ..:. .: . :: ::::.:::::::::. ..:
NP_858 AAFWLPYHVVNLAEAGRALAGQAAGLGLVGKRLSLARNVLIALAFLSSSVNPVLYACAGG
240 250 260 270 280 290
300 310 320 330 340
pF1KE9 DLLPRAGPRFLTRLFEGSG-EA----RGG--GRS-REGTMELRTTPQLKVVGQGRGNGDP
:: :: :...:.::.: :: ::: :.. : : :. :
NP_858 GLLRSAGVGFVAKLLEGTGSEASSTRRGGSLGQTARSGPAALEPGPSESLTASSPLKLNE
300 310 320 330 340 350
350
pF1KE9 GGGMEKDGPEWDL
NP_858 LN
>>NP_003941 (OMIM: 602779) proteinase-activated receptor (385 aa)
initn: 288 init1: 190 opt: 416 Z-score: 432.5 bits: 88.7 E(85289): 2.4e-17
Smith-Waterman score: 416; 34.2% identity (59.9% similar) in 322 aa overlap (13-319:71-375)
10 20 30 40
pF1KE9 MSVCYRPPGNETLLSWKTSRATGTAFLLLAALLGLPGNGFVV
::.: .: . :. :. ..:::.::...
NP_003 SILPAPRGYPGQVCANDSDTLELPDSSRALLLGWVPTRLV-PALYGLVLVVGLPANGLAL
50 60 70 80 90
50 60 70 80 90 100
pF1KE9 WSLAGWRPARGRPLAATLVLHLALADGAVLLLTPLFVAFLTR-QAWPLGQAGCKAVYYVC
: :: : : .. :...:: :: . : : .:. : : ::.:.:.:. . .
NP_003 WVLATQAP---RLPSTMLLMNLAAADLLLALALPPRIAYHLRGQRWPFGEAACRLATAAL
100 110 120 130 140 150
110 120 130 140 150 160
pF1KE9 ALSMYASVLLTGLLSLQRCLAVTRPFLAPRLRSPALARRLLLAVWLAALLLAVPAAVYRH
::.:::: . .::.: ::...:. : ::. :: : .:.:: : ::.: .. :.
NP_003 YGHMYGSVLLLAAVSLDRYLALVHPLRARALRGRRLALGLCMAAWLMAAALALPLTLQRQ
160 170 180 190 200 210
170 180 190 200 210
pF1KE9 LWR----DRVCQLCHPS-PVHA-AAH----LSLETLTAFVLPFGLMLGCYSVTLARLRGA
.: ::: ::: . :. : :.: .. .: . ::. :: ::..:: : .
NP_003 TFRLARSDRV--LCHDALPLDAQASHWQPAFTCLALLGCFLPLLAMLLCYGATLHTLAA-
220 230 240 250 260 270
220 230 240 250 260 270
pF1KE9 RWGSGRHGARVGRLVSAIVLAFGLLWAPYHAVNLLQAVAALAPPEGALAKLGGAGQAARA
:::. ... :: .:.::: .. : . ::: . : .: ..: :: .
NP_003 ---SGRRYGHALRL-TAVVLASAV--AFFVPSNLLLLLHYSDPSPSAWGNLYGA----YV
280 290 300 310 320
280 290 300 310 320
pF1KE9 GTTALAFFSSSVNPVLYVFTAGDLLP--RAG--PRFLTRLFEGSGEARGGGRSREGTMEL
. ::. ..: :.: .: ...... ::: : ... :.::.:
NP_003 PSLALSTLNSCVDPFIYYYVSAEFRDKVRAGLFQRSPGDTVASKASAEGGSRGMGTHSSL
330 340 350 360 370 380
330 340 350
pF1KE9 RTTPQLKVVGQGRGNGDPGGGMEKDGPEWDL
NP_003 LQ
>>NP_057686 (OMIM: 600240) C-C chemokine receptor type 1 (362 aa)
initn: 282 init1: 84 opt: 412 Z-score: 428.7 bits: 87.9 E(85289): 3.8e-17
Smith-Waterman score: 412; 35.6% identity (61.5% similar) in 317 aa overlap (19-323:40-339)
10 20 30 40
pF1KE9 MSVCYRPPGNETLLSWKTSRATGTAFLLLAALLGLPGNGFVVWS-LAG
::: . : .: ::: :::.:. . ::.
NP_057 SWGHYSGDEEDAYSAEPLPELCYKADVQAFSRAFQPSVSLTVAALGLAGNGLVLATHLAA
10 20 30 40 50 60
50 60 70 80 90 100
pF1KE9 WRPARGRPLAATLVLHLALADGAVLLLTPLFVAFLTRQAWPLGQAGCKAVYYVCALSMYA
: ::. : .: : :.::::: . : : :.: . :.: ::.: :... . . :..:
NP_057 RRAARS-PTSAHL-LQLALADLLLALTLP-FAAAGALQGWSLGSATCRTISGLYSASFHA
70 80 90 100 110 120
110 120 130 140 150 160
pF1KE9 SVLLTGLLSLQRCLAVTRPFLA-PRLRSPALARRLLLAVWLAALLLAVPAAVYRHL-WRD
. :. . .: .: .:..: . : :: .:. :. . . ::: .::::.:: .. . :.
NP_057 GFLFLACISADRYVAIARALPAGPRPSTPGRAHLVSVIVWLLSLLLALPALLFSQDGQRE
130 140 150 160 170 180
170 180 190 200 210
pF1KE9 --RVCQLCHP----SPVHAAAHLSLETLTAFVLPFGLMLGCYSVTLARLRGARWGSGRHG
: :.: : . :..:. .. .: .:.::.:.:..::.. : .:: : :.
NP_057 GQRRCRLIFPEGLTQTVKGASAVAQVAL-GFALPLGVMVACYALLGRTLLAAR-GPERR-
190 200 210 220 230 240
220 230 240 250 260 270
pF1KE9 ARVGRLVSAIVLAFGLLWAPYHAVNLLQAVAALAPPEGALAKLGGAGQAARAGTTALAFF
:. :.: :.: :: .: :: . ::... :: : . . ..: :..::.
NP_057 -RALRVVVALVAAFVVLQLPYSLALLLDTADLLAARERS-CPASKRKDVALLVTSGLALA
250 260 270 280 290 300
280 290 300 310 320 330
pF1KE9 SSSVNPVLYVFTAGDLLPRAGPRF---LTRLFEGSGEARGGGRSREGTMELRTTPQLKVV
..:::::.: : :: : ::..: : .: . :.:
NP_057 RCGLNPVLYAFL--------GLRFRQDLRRLLRG-GSCPSGPQPRRGCPRRPRLSSCSAP
310 320 330 340 350
340 350
pF1KE9 GQGRGNGDPGGGMEKDGPEWDL
NP_057 TETHSLSWDN
360
>>NP_001495 (OMIM: 300574) C-X-C chemokine receptor type (368 aa)
initn: 332 init1: 121 opt: 409 Z-score: 425.6 bits: 87.3 E(85289): 5.7e-17
Smith-Waterman score: 409; 33.1% identity (58.6% similar) in 326 aa overlap (2-319:36-346)
10 20 30
pF1KE9 MSVCYRPPGNETLLSWKTSRATGTAFLLLAA
: : :: . . : . .:: :. :
NP_001 SDHQVLNDAEVAALLENFSSSYDYGENESDSCCTSPPCPQDF-SLNFDRAFLPALYSLLF
10 20 30 40 50 60
40 50 60 70 80 90
pF1KE9 LLGLPGNGFVVWSLAGWRPARGRPLAATLVLHLALADGAVLLLTPLFVAFLTRQAWPLGQ
:::: ::: :. : . : : . . :..::::.:: ..: ::... . : : .:.
NP_001 LLGLLGNGAVAAVLLSRRTALSS--TDTFLLHLAVADTLLVLTLPLWAVDAAVQ-WVFGS
70 80 90 100 110 120
100 110 120 130 140 150
pF1KE9 AGCKAVYYVCALSMYASVLLTGLLSLQRCLAVTRPFLAPRLRSPALARRLLLAVWLAALL
. ::.. . ...::..:: . .:..: : ... : :: . :::: ::
NP_001 GLCKVAGALFNINFYAGALLLACISFDRYLNIVHATQLYRRGPPARVTLTCLAVWGLCLL
130 140 150 160 170 180
160 170 180 190 200
pF1KE9 LAVPAAVYRHLWRD-RV----CQLCHPSPVHAAAHLSLETLTAFVLPFGLMLGCYSVTLA
.:.: .. .: :. :: :. : .: :. ...:.::. .: ::. ::
NP_001 FALPDFIFLSAHHDERLNATHCQYNFPQ-VGRTALRVLQLVAGFLLPLLVMAYCYAHILA
190 200 210 220 230 240
210 220 230 240 250 260
pF1KE9 RLRGARWGSGRHGARVGRLVSAIVLAFGLLWAPYHAVNLLQAVAALAPPEGALAKLGGAG
: .: :.. :. ::: ..:.::.: :.::: : :.. . : ::::. :
NP_001 VLLVSR---GQRRLRAMRLVVVVVVAFALCWTPYHLVVLVDILMDL----GALARNCGRE
250 260 270 280 290
270 280 290 300 310 320
pF1KE9 Q---AARAGTTALAFFSSSVNPVLYVFTAGDLLPRAGPRFLTRLFEGSGEARGGGRSREG
. .:.. :..:... .::.::.:.. . : .: :: : . :: :
NP_001 SRVDVAKSVTSGLGYMHCCLNPLLYAFVGVKFRERMW-MLLLRL--GCPNQRGLQRQPSS
300 310 320 330 340 350
330 340 350
pF1KE9 TMELRTTPQLKVVGQGRGNGDPGGGMEKDGPEWDL
NP_001 SRRDSSWSETSEASYSGL
360
>>XP_005262313 (OMIM: 300574) PREDICTED: C-X-C chemokine (378 aa)
initn: 332 init1: 121 opt: 409 Z-score: 425.5 bits: 87.4 E(85289): 5.8e-17
Smith-Waterman score: 409; 33.1% identity (58.6% similar) in 326 aa overlap (2-319:46-356)
10 20 30
pF1KE9 MSVCYRPPGNETLLSWKTSRATGTAFLLLAA
: : :: . . : . .:: :. :
XP_005 SDHQVLNDAEVAALLENFSSSYDYGENESDSCCTSPPCPQDF-SLNFDRAFLPALYSLLF
20 30 40 50 60 70
40 50 60 70 80 90
pF1KE9 LLGLPGNGFVVWSLAGWRPARGRPLAATLVLHLALADGAVLLLTPLFVAFLTRQAWPLGQ
:::: ::: :. : . : : . . :..::::.:: ..: ::... . : : .:.
XP_005 LLGLLGNGAVAAVLLSRRTALSS--TDTFLLHLAVADTLLVLTLPLWAVDAAVQ-WVFGS
80 90 100 110 120 130
100 110 120 130 140 150
pF1KE9 AGCKAVYYVCALSMYASVLLTGLLSLQRCLAVTRPFLAPRLRSPALARRLLLAVWLAALL
. ::.. . ...::..:: . .:..: : ... : :: . :::: ::
XP_005 GLCKVAGALFNINFYAGALLLACISFDRYLNIVHATQLYRRGPPARVTLTCLAVWGLCLL
140 150 160 170 180 190
160 170 180 190 200
pF1KE9 LAVPAAVYRHLWRD-RV----CQLCHPSPVHAAAHLSLETLTAFVLPFGLMLGCYSVTLA
.:.: .. .: :. :: :. : .: :. ...:.::. .: ::. ::
XP_005 FALPDFIFLSAHHDERLNATHCQYNFPQ-VGRTALRVLQLVAGFLLPLLVMAYCYAHILA
200 210 220 230 240 250
210 220 230 240 250 260
pF1KE9 RLRGARWGSGRHGARVGRLVSAIVLAFGLLWAPYHAVNLLQAVAALAPPEGALAKLGGAG
: .: :.. :. ::: ..:.::.: :.::: : :.. . : ::::. :
XP_005 VLLVSR---GQRRLRAMRLVVVVVVAFALCWTPYHLVVLVDILMDL----GALARNCGRE
260 270 280 290 300
270 280 290 300 310 320
pF1KE9 Q---AARAGTTALAFFSSSVNPVLYVFTAGDLLPRAGPRFLTRLFEGSGEARGGGRSREG
. .:.. :..:... .::.::.:.. . : .: :: : . :: :
XP_005 SRVDVAKSVTSGLGYMHCCLNPLLYAFVGVKFRERMW-MLLLRL--GCPNQRGLQRQPSS
310 320 330 340 350 360
330 340 350
pF1KE9 TMELRTTPQLKVVGQGRGNGDPGGGMEKDGPEWDL
XP_005 SRRDSSWSETSEASYSGL
370
>>NP_001136269 (OMIM: 300574) C-X-C chemokine receptor t (415 aa)
initn: 332 init1: 121 opt: 409 Z-score: 425.0 bits: 87.4 E(85289): 6.2e-17
Smith-Waterman score: 409; 33.1% identity (58.6% similar) in 326 aa overlap (2-319:83-393)
10 20 30
pF1KE9 MSVCYRPPGNETLLSWKTSRATGTAFLLLAA
: : :: . . : . .:: :. :
NP_001 SDHQVLNDAEVAALLENFSSSYDYGENESDSCCTSPPCPQDF-SLNFDRAFLPALYSLLF
60 70 80 90 100 110
40 50 60 70 80 90
pF1KE9 LLGLPGNGFVVWSLAGWRPARGRPLAATLVLHLALADGAVLLLTPLFVAFLTRQAWPLGQ
:::: ::: :. : . : : . . :..::::.:: ..: ::... . : : .:.
NP_001 LLGLLGNGAVAAVLLSRRTALSS--TDTFLLHLAVADTLLVLTLPLWAVDAAVQ-WVFGS
120 130 140 150 160
100 110 120 130 140 150
pF1KE9 AGCKAVYYVCALSMYASVLLTGLLSLQRCLAVTRPFLAPRLRSPALARRLLLAVWLAALL
. ::.. . ...::..:: . .:..: : ... : :: . :::: ::
NP_001 GLCKVAGALFNINFYAGALLLACISFDRYLNIVHATQLYRRGPPARVTLTCLAVWGLCLL
170 180 190 200 210 220
160 170 180 190 200
pF1KE9 LAVPAAVYRHLWRD-RV----CQLCHPSPVHAAAHLSLETLTAFVLPFGLMLGCYSVTLA
.:.: .. .: :. :: :. : .: :. ...:.::. .: ::. ::
NP_001 FALPDFIFLSAHHDERLNATHCQYNFPQ-VGRTALRVLQLVAGFLLPLLVMAYCYAHILA
230 240 250 260 270 280
210 220 230 240 250 260
pF1KE9 RLRGARWGSGRHGARVGRLVSAIVLAFGLLWAPYHAVNLLQAVAALAPPEGALAKLGGAG
: .: :.. :. ::: ..:.::.: :.::: : :.. . : ::::. :
NP_001 VLLVSR---GQRRLRAMRLVVVVVVAFALCWTPYHLVVLVDILMDL----GALARNCGRE
290 300 310 320 330 340
270 280 290 300 310 320
pF1KE9 Q---AARAGTTALAFFSSSVNPVLYVFTAGDLLPRAGPRFLTRLFEGSGEARGGGRSREG
. .:.. :..:... .::.::.:.. . : .: :: : . :: :
NP_001 SRVDVAKSVTSGLGYMHCCLNPLLYAFVGVKFRERMW-MLLLRL--GCPNQRGLQRQPSS
350 360 370 380 390
330 340 350
pF1KE9 TMELRTTPQLKVVGQGRGNGDPGGGMEKDGPEWDL
NP_001 SRRDSSWSETSEASYSGL
400 410
>>XP_016884924 (OMIM: 300574) PREDICTED: C-X-C chemokine (415 aa)
initn: 332 init1: 121 opt: 409 Z-score: 425.0 bits: 87.4 E(85289): 6.2e-17
Smith-Waterman score: 409; 33.1% identity (58.6% similar) in 326 aa overlap (2-319:83-393)
10 20 30
pF1KE9 MSVCYRPPGNETLLSWKTSRATGTAFLLLAA
: : :: . . : . .:: :. :
XP_016 SDHQVLNDAEVAALLENFSSSYDYGENESDSCCTSPPCPQDF-SLNFDRAFLPALYSLLF
60 70 80 90 100 110
40 50 60 70 80 90
pF1KE9 LLGLPGNGFVVWSLAGWRPARGRPLAATLVLHLALADGAVLLLTPLFVAFLTRQAWPLGQ
:::: ::: :. : . : : . . :..::::.:: ..: ::... . : : .:.
XP_016 LLGLLGNGAVAAVLLSRRTALSS--TDTFLLHLAVADTLLVLTLPLWAVDAAVQ-WVFGS
120 130 140 150 160
100 110 120 130 140 150
pF1KE9 AGCKAVYYVCALSMYASVLLTGLLSLQRCLAVTRPFLAPRLRSPALARRLLLAVWLAALL
. ::.. . ...::..:: . .:..: : ... : :: . :::: ::
XP_016 GLCKVAGALFNINFYAGALLLACISFDRYLNIVHATQLYRRGPPARVTLTCLAVWGLCLL
170 180 190 200 210 220
160 170 180 190 200
pF1KE9 LAVPAAVYRHLWRD-RV----CQLCHPSPVHAAAHLSLETLTAFVLPFGLMLGCYSVTLA
.:.: .. .: :. :: :. : .: :. ...:.::. .: ::. ::
XP_016 FALPDFIFLSAHHDERLNATHCQYNFPQ-VGRTALRVLQLVAGFLLPLLVMAYCYAHILA
230 240 250 260 270 280
210 220 230 240 250 260
pF1KE9 RLRGARWGSGRHGARVGRLVSAIVLAFGLLWAPYHAVNLLQAVAALAPPEGALAKLGGAG
: .: :.. :. ::: ..:.::.: :.::: : :.. . : ::::. :
XP_016 VLLVSR---GQRRLRAMRLVVVVVVAFALCWTPYHLVVLVDILMDL----GALARNCGRE
290 300 310 320 330 340
270 280 290 300 310 320
pF1KE9 Q---AARAGTTALAFFSSSVNPVLYVFTAGDLLPRAGPRFLTRLFEGSGEARGGGRSREG
. .:.. :..:... .::.::.:.. . : .: :: : . :: :
XP_016 SRVDVAKSVTSGLGYMHCCLNPLLYAFVGVKFRERMW-MLLLRL--GCPNQRGLQRQPSS
350 360 370 380 390
330 340 350
pF1KE9 TMELRTTPQLKVVGQGRGNGDPGGGMEKDGPEWDL
XP_016 SRRDSSWSETSEASYSGL
400 410
358 residues in 1 query sequences
60827320 residues in 85289 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Mon Nov 7 14:41:17 2016 done: Mon Nov 7 14:41:19 2016
Total Scan time: 9.090 Total Display time: 0.050
Function used was FASTA [36.3.4 Apr, 2011]