Result of FASTA (omim) for
pFN21AE9504
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KE9504, 388 aa
1>>>pF1KE9504 388 - 388 aa - 388 aa
Library: /omim/omim.rfq.tfa
60827320 residues in 85289 sequences
Statistics: Expectation_n fit: rho(ln(x))= 4.9389+/-0.000324; mu= 19.7742+/- 0.021
mean_var=90.6203+/-20.526, 0's: 0 Z-trim(117.5): 789 B-trim: 2708 in 2/49
Lambda= 0.134729
statistics sampled from 28636 (29532) to 28636 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.686), E-opt: 0.2 (0.346), width: 16
Scan time: 8.760
The best scores are: opt bits E(85289)
NP_001043 (OMIM: 182454) somatostatin receptor typ ( 388) 2564 508.4 1.2e-143
NP_001040 (OMIM: 182451) somatostatin receptor typ ( 391) 1462 294.2 3.6e-79
NP_001166031 (OMIM: 182455) somatostatin receptor ( 364) 1157 234.9 2.4e-61
NP_001044 (OMIM: 182455) somatostatin receptor typ ( 364) 1157 234.9 2.4e-61
NP_001041 (OMIM: 182452) somatostatin receptor typ ( 369) 1121 227.9 3.1e-59
XP_006724374 (OMIM: 182453) PREDICTED: somatostati ( 418) 1060 216.1 1.3e-55
XP_016884413 (OMIM: 182453) PREDICTED: somatostati ( 418) 1060 216.1 1.3e-55
XP_005261778 (OMIM: 182453) PREDICTED: somatostati ( 418) 1060 216.1 1.3e-55
XP_011528651 (OMIM: 182453) PREDICTED: somatostati ( 418) 1060 216.1 1.3e-55
XP_016884412 (OMIM: 182453) PREDICTED: somatostati ( 418) 1060 216.1 1.3e-55
NP_001042 (OMIM: 182453) somatostatin receptor typ ( 418) 1060 216.1 1.3e-55
NP_001265616 (OMIM: 182453) somatostatin receptor ( 418) 1060 216.1 1.3e-55
NP_000902 (OMIM: 165195) delta-type opioid recepto ( 372) 934 191.5 2.7e-48
NP_000903 (OMIM: 165196) kappa-type opioid recepto ( 380) 871 179.3 1.3e-44
NP_001305426 (OMIM: 165196) kappa-type opioid rece ( 409) 871 179.3 1.4e-44
NP_001138757 (OMIM: 600018) mu-type opioid recepto ( 389) 861 177.4 5.3e-44
NP_001008504 (OMIM: 600018) mu-type opioid recepto ( 392) 861 177.4 5.3e-44
NP_001138755 (OMIM: 600018) mu-type opioid recepto ( 397) 861 177.4 5.3e-44
NP_000905 (OMIM: 600018) mu-type opioid receptor i ( 400) 861 177.4 5.4e-44
NP_001138756 (OMIM: 600018) mu-type opioid recepto ( 403) 861 177.4 5.4e-44
NP_001138754 (OMIM: 600018) mu-type opioid recepto ( 406) 861 177.4 5.4e-44
NP_001272452 (OMIM: 600018) mu-type opioid recepto ( 414) 861 177.4 5.5e-44
NP_001008503 (OMIM: 600018) mu-type opioid recepto ( 418) 861 177.4 5.5e-44
NP_001138758 (OMIM: 600018) mu-type opioid recepto ( 420) 861 177.4 5.5e-44
NP_001008505 (OMIM: 600018) mu-type opioid recepto ( 446) 861 177.4 5.8e-44
NP_001272453 (OMIM: 600018) mu-type opioid recepto ( 493) 861 177.5 6.2e-44
NP_001138751 (OMIM: 600018) mu-type opioid recepto ( 493) 861 177.5 6.2e-44
XP_016883343 (OMIM: 602548) PREDICTED: nociceptin ( 370) 827 170.7 5e-42
NP_872588 (OMIM: 602548) nociceptin receptor isofo ( 370) 827 170.7 5e-42
NP_000904 (OMIM: 602548) nociceptin receptor isofo ( 370) 827 170.7 5e-42
NP_001186948 (OMIM: 602548) nociceptin receptor is ( 370) 827 170.7 5e-42
XP_016883342 (OMIM: 602548) PREDICTED: nociceptin ( 388) 827 170.7 5.1e-42
XP_016883341 (OMIM: 602548) PREDICTED: nociceptin ( 388) 827 170.7 5.1e-42
XP_011527130 (OMIM: 602548) PREDICTED: nociceptin ( 388) 827 170.7 5.1e-42
NP_001305782 (OMIM: 602548) nociceptin receptor is ( 399) 827 170.8 5.2e-42
NP_001305783 (OMIM: 602548) nociceptin receptor is ( 365) 781 161.8 2.4e-39
XP_016883344 (OMIM: 602548) PREDICTED: nociceptin ( 365) 781 161.8 2.4e-39
NP_005277 (OMIM: 600731) neuropeptides B/W recepto ( 333) 766 158.8 1.7e-38
NP_001138753 (OMIM: 600018) mu-type opioid recepto ( 319) 764 158.4 2.2e-38
NP_001272456 (OMIM: 600018) mu-type opioid recepto ( 292) 743 154.3 3.5e-37
XP_016866395 (OMIM: 600018) PREDICTED: mu-type opi ( 300) 743 154.3 3.6e-37
NP_001138752 (OMIM: 600018) mu-type opioid recepto ( 300) 743 154.3 3.6e-37
NP_001272455 (OMIM: 600018) mu-type opioid recepto ( 300) 743 154.3 3.6e-37
NP_001138759 (OMIM: 600018) mu-type opioid recepto ( 300) 743 154.3 3.6e-37
NP_001272457 (OMIM: 600018) mu-type opioid recepto ( 314) 743 154.3 3.7e-37
XP_016866394 (OMIM: 600018) PREDICTED: mu-type opi ( 346) 743 154.4 3.9e-37
XP_011534153 (OMIM: 600018) PREDICTED: mu-type opi ( 346) 743 154.4 3.9e-37
XP_016866392 (OMIM: 600018) PREDICTED: mu-type opi ( 346) 743 154.4 3.9e-37
XP_011534155 (OMIM: 600018) PREDICTED: mu-type opi ( 346) 743 154.4 3.9e-37
XP_011534158 (OMIM: 600018) PREDICTED: mu-type opi ( 346) 743 154.4 3.9e-37
>>NP_001043 (OMIM: 182454) somatostatin receptor type 4 (388 aa)
initn: 2564 init1: 2564 opt: 2564 Z-score: 2700.0 bits: 508.4 E(85289): 1.2e-143
Smith-Waterman score: 2564; 99.5% identity (99.5% similar) in 388 aa overlap (1-388:1-388)
10 20 30 40 50 60
pF1KE9 MSAPSTLPPGGEEGLGTAWPSAANASSAPAEAEEAVAGPGDARAAGMVAIQCIYALVCLV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MSAPSTLPPGGEEGLGTAWPSAANASSAPAEAEEAVAGPGDARAAGMVAIQCIYALVCLV
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE9 GLVGNALVIFVILRYAKMKTATNIYLLNLAVADELFMLSVPFVASSAALRHWPFGSVLCR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 GLVGNALVIFVILRYAKMKTATNIYLLNLAVADELFMLSVPFVASSAALRHWPFGSVLCR
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE9 AVLSVDGLNMFTSVFCLTVLSVDRYVAVVHPLRAATYRRPSVAKLINLGVWLASLLVTLP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 AVLSVDGLNMFTSVFCLTVLSVDRYVAVVHPLRAATYRRPSVAKLINLGVWLASLLVTLP
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE9 IAIFADTRPARGGQAVACNLQWPHPAWSAVFVVYTFLLGFLLPVLAIGLCYLLIVGKMRA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 IAIFADTRPARGGQAVACNLQWPHPAWSAVFVVYTFLLGFLLPVLAIGLCYLLIVGKMRA
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE9 VALRAGWQQRRRSEKKITRLVLMVVVVFVLCWMPFYVVQLLNLVVTSLDATVNHVSLILS
::::::::::::::::::::::::::::::::::::::::::: ::::::::::::::::
NP_001 VALRAGWQQRRRSEKKITRLVLMVVVVFVLCWMPFYVVQLLNLFVTSLDATVNHVSLILS
250 260 270 280 290 300
310 320 330 340 350 360
pF1KE9 YANSCANPILYGFLSDNFRRSFQRVLCLRCCLLEGAGGAEEEPLDYYATALKSKGGAGCM
:::::::::::::::::::: :::::::::::::::::::::::::::::::::::::::
NP_001 YANSCANPILYGFLSDNFRRFFQRVLCLRCCLLEGAGGAEEEPLDYYATALKSKGGAGCM
310 320 330 340 350 360
370 380
pF1KE9 CPPLPCQQEALQPEPGRKRIPLTRTTTF
::::::::::::::::::::::::::::
NP_001 CPPLPCQQEALQPEPGRKRIPLTRTTTF
370 380
>>NP_001040 (OMIM: 182451) somatostatin receptor type 1 (391 aa)
initn: 1407 init1: 709 opt: 1462 Z-score: 1542.3 bits: 294.2 E(85289): 3.6e-79
Smith-Waterman score: 1462; 62.9% identity (83.4% similar) in 356 aa overlap (2-354:12-361)
10 20 30 40
pF1KE9 MSAPSTLPPGGEEGLGTAWPSAANASSAPAEAEEAVAGPGDARAAG-MVA
:.:: : . :: :. :.:. :.. ...: . ... : .
NP_001 MFPNGTASSPSSSPSPSPGSCGEGGGSRGPGAGAADGMEEPGRNASQNGTLSEGQGSAIL
10 20 30 40 50 60
50 60 70 80 90 100
pF1KE9 IQCIYALVCLVGLVGNALVIFVILRYAKMKTATNIYLLNLAVADELFMLSVPFVASSAAL
:. ::..:::::: ::..::.:::::::::::::::.::::.::::.::::::...:. :
NP_001 ISFIYSVVCLVGLCGNSMVIYVILRYAKMKTATNIYILNLAIADELLMLSVPFLVTSTLL
70 80 90 100 110 120
110 120 130 140 150 160
pF1KE9 RHWPFGSVLCRAVLSVDGLNMFTSVFCLTVLSVDRYVAVVHPLRAATYRRPSVAKLINLG
::::::..::: :::::..:::::..::::::::::::::::..:: ::::.:::..:::
NP_001 RHWPFGALLCRLVLSVDAVNMFTSIYCLTVLSVDRYVAVVHPIKAARYRRPTVAKVVNLG
130 140 150 160 170 180
170 180 190 200 210 220
pF1KE9 VWLASLLVTLPIAIFADTRPARGGQAVACNLQWPHPA--WSAVFVVYTFLLGFLLPVLAI
::. :::: :::..:. : : .::::. :.:: : . ::.::::.:::::: ::
NP_001 VWVLSLLVILPIVVFSRTAANSDG-TVACNMLMPEPAQRWLVGFVLYTFLMGFLLPVGAI
190 200 210 220 230
230 240 250 260 270 280
pF1KE9 GLCYLLIVGKMRAVALRAGWQQRRRSEKKITRLVLMVVVVFVLCWMPFYVVQLLNLVVTS
:::.::..::: :::.::::::.:::.::: .:.:::.:::.::::::::::.:. . .
NP_001 CLCYVLIIAKMRMVALKAGWQQRKRSERKITLMVMMVVMVFVICWMPFYVVQLVNVFAEQ
240 250 260 270 280 290
290 300 310 320 330 340
pF1KE9 LDATVNHVSLILSYANSCANPILYGFLSDNFRRSFQRVLCLRCCLLEGAGGAEEEPLDYY
::::...:.::.::::::::::::::::::.:::::.::: .: :::.:::
NP_001 DDATVSQLSVILGYANSCANPILYGFLSDNFKRSFQRILCLS-----WMDNAAEEPVDYY
300 310 320 330 340 350
350 360 370 380
pF1KE9 ATALKSKGGAGCMCPPLPCQQEALQPEPGRKRIPLTRTTTF
::::::.
NP_001 ATALKSRAYSVEDFQPENLESGGVFRNGTCTSRITTL
360 370 380 390
>>NP_001166031 (OMIM: 182455) somatostatin receptor type (364 aa)
initn: 765 init1: 765 opt: 1157 Z-score: 1222.3 bits: 234.9 E(85289): 2.4e-61
Smith-Waterman score: 1157; 50.6% identity (78.4% similar) in 352 aa overlap (18-363:11-349)
10 20 30 40 50 60
pF1KE9 MSAPSTLPPGGEEGLGTAWPSAANASSAPAEAEEAVAGPGDARAAGMVAIQCIYALVCLV
.: ... .... . .....::. . .: : . .: ::: .
NP_001 MEPLFPASTPSWNASSPGAASGGGDNRTLVGPAPSAGARAVLVPVLYLLVCAA
10 20 30 40 50
70 80 90 100 110 120
pF1KE9 GLVGNALVIFVILRYAKMKTATNIYLLNLAVADELFMLSVPFVASSAALRHWPFGSVLCR
:: ::.:::.:.::.:::::.::::.::::::: :.::..::.:.. : :::: ::::
NP_001 GLGGNTLVIYVVLRFAKMKTVTNIYILNLAVADVLYMLGLPFLATQNAASFWPFGPVLCR
60 70 80 90 100 110
130 140 150 160 170 180
pF1KE9 AVLSVDGLNMFTSVFCLTVLSVDRYVAVVHPLRAATYRRPSVAKLINLGVWLASLLVTLP
:...::.:.:::::::::.:::::.:::::: .: .::: :::: . ..:. :: ..::
NP_001 LVMTLDGVNQFTSVFCLTVMSVDRYLAVVHPLSSARWRRPRVAKLASAAAWVLSLCMSLP
120 130 140 150 160 170
190 200 210 220 230
pF1KE9 IAIFADTRPARGGQAVACNLQWPHPA--WSAVFVVYTFLLGFLLPVLAIGLCYLLIVGKM
. .:::.. .:: .:: .::.:. :.:::..:: .:::. :.:.: ::::::: :.
NP_001 LLVFADVQ--EGG---TCNASWPEPVGLWGAVFIIYTAVLGFFAPLLVICLCYLLIVVKV
180 190 200 210 220
240 250 260 270 280 290
pF1KE9 RAVALRAGWQQRRRSEKKITRLVLMVVVVFVLCWMPFYVVQLLNLVVT----SLDATVNH
::...:.: :::::.:.::.::.::.::. ::.::..:...::.:. .: .
NP_001 RAAGVRVG-CVRRRSERKVTRMVLVVVLVFAGCWLPFFTVNIVNLAVALPQEPASAGLYF
230 240 250 260 270 280
300 310 320 330 340 350
pF1KE9 VSLILSYANSCANPILYGFLSDNFRRSFQRVLCLRCCLLEGAGGAEEEPLDYYATALKSK
.:::::::::::.::::::::::.:::.::::: .:.:. . . . ....
NP_001 FVVILSYANSCANPVLYGFLSDNFRQSFQKVLCLR----KGSGAKDADATEPRPDRIRQQ
290 300 310 320 330 340
360 370 380
pF1KE9 GGAGCMCPPLPCQQEALQPEPGRKRIPLTRTTTF
: ::
NP_001 QEA---TPPAHRAAANGLMQTSKL
350 360
>>NP_001044 (OMIM: 182455) somatostatin receptor type 5 (364 aa)
initn: 765 init1: 765 opt: 1157 Z-score: 1222.3 bits: 234.9 E(85289): 2.4e-61
Smith-Waterman score: 1157; 50.6% identity (78.4% similar) in 352 aa overlap (18-363:11-349)
10 20 30 40 50 60
pF1KE9 MSAPSTLPPGGEEGLGTAWPSAANASSAPAEAEEAVAGPGDARAAGMVAIQCIYALVCLV
.: ... .... . .....::. . .: : . .: ::: .
NP_001 MEPLFPASTPSWNASSPGAASGGGDNRTLVGPAPSAGARAVLVPVLYLLVCAA
10 20 30 40 50
70 80 90 100 110 120
pF1KE9 GLVGNALVIFVILRYAKMKTATNIYLLNLAVADELFMLSVPFVASSAALRHWPFGSVLCR
:: ::.:::.:.::.:::::.::::.::::::: :.::..::.:.. : :::: ::::
NP_001 GLGGNTLVIYVVLRFAKMKTVTNIYILNLAVADVLYMLGLPFLATQNAASFWPFGPVLCR
60 70 80 90 100 110
130 140 150 160 170 180
pF1KE9 AVLSVDGLNMFTSVFCLTVLSVDRYVAVVHPLRAATYRRPSVAKLINLGVWLASLLVTLP
:...::.:.:::::::::.:::::.:::::: .: .::: :::: . ..:. :: ..::
NP_001 LVMTLDGVNQFTSVFCLTVMSVDRYLAVVHPLSSARWRRPRVAKLASAAAWVLSLCMSLP
120 130 140 150 160 170
190 200 210 220 230
pF1KE9 IAIFADTRPARGGQAVACNLQWPHPA--WSAVFVVYTFLLGFLLPVLAIGLCYLLIVGKM
. .:::.. .:: .:: .::.:. :.:::..:: .:::. :.:.: ::::::: :.
NP_001 LLVFADVQ--EGG---TCNASWPEPVGLWGAVFIIYTAVLGFFAPLLVICLCYLLIVVKV
180 190 200 210 220
240 250 260 270 280 290
pF1KE9 RAVALRAGWQQRRRSEKKITRLVLMVVVVFVLCWMPFYVVQLLNLVVT----SLDATVNH
::...:.: :::::.:.::.::.::.::. ::.::..:...::.:. .: .
NP_001 RAAGVRVG-CVRRRSERKVTRMVLVVVLVFAGCWLPFFTVNIVNLAVALPQEPASAGLYF
230 240 250 260 270 280
300 310 320 330 340 350
pF1KE9 VSLILSYANSCANPILYGFLSDNFRRSFQRVLCLRCCLLEGAGGAEEEPLDYYATALKSK
.:::::::::::.::::::::::.:::.::::: .:.:. . . . ....
NP_001 FVVILSYANSCANPVLYGFLSDNFRQSFQKVLCLR----KGSGAKDADATEPRPDRIRQQ
290 300 310 320 330 340
360 370 380
pF1KE9 GGAGCMCPPLPCQQEALQPEPGRKRIPLTRTTTF
: ::
NP_001 QEA---TPPAHRAAANGLMQTSKL
350 360
>>NP_001041 (OMIM: 182452) somatostatin receptor type 2 (369 aa)
initn: 1100 init1: 644 opt: 1121 Z-score: 1184.4 bits: 227.9 E(85289): 3.1e-59
Smith-Waterman score: 1121; 55.7% identity (85.1% similar) in 282 aa overlap (53-328:49-329)
30 40 50 60 70 80
pF1KE9 ANASSAPAEAEEAVAGPGDARAAGMVAIQCIYALVCLVGLVGNALVIFVILRYAKMKTAT
:: .::..:: ::.:::.:::::::::: :
NP_001 FDLNGSVVSTNTSNQTEPYYDLTSNAVLTFIYFVVCIIGLCGNTLVIYVILRYAKMKTIT
20 30 40 50 60 70
90 100 110 120 130 140
pF1KE9 NIYLLNLAVADELFMLSVPFVASSAALRHWPFGSVLCRAVLSVDGLNMFTSVFCLTVLSV
:::.::::.:::::::..::.: ..:: :::::...::.:..:::.:.:::.:::::.:.
NP_001 NIYILNLAIADELFMLGLPFLAMQVALVHWPFGKAICRVVMTVDGINQFTSIFCLTVMSI
80 90 100 110 120 130
150 160 170 180 190 200
pF1KE9 DRYVAVVHPLRAATYRRPSVAKLINLGVWLASLLVTLPIAIFADTRPARGGQAVACNLQW
:::.:::::...: .::: .::.:...:: .:::: ::: :.: : . :.. .:...:
NP_001 DRYLAVVHPIKSAKWRRPRTAKMITMAVWGVSLLVILPIMIYAGLRSNQWGRS-SCTINW
140 150 160 170 180 190
210 220 230 240 250 260
pF1KE9 PHP--AWSAVFVVYTFLLGFLLPVLAIGLCYLLIVGKMRAVALRAGWQQRRRSEKKITRL
: :: . :..:::.::::.:. : ::::.:. :... ..:.: ..:..::::.::.
NP_001 PGESGAWYTGFIIYTFILGFLVPLTIICLCYLFIIIKVKSSGIRVGSSKRKKSEKKVTRM
200 210 220 230 240 250
270 280 290 300 310
pF1KE9 VLMVVVVFVLCWMPFYV--VQLLNLVVTSLDATVNHVSLI--LSYANSCANPILYGFLSD
: .::.::..::.:::. :. ...... : . ... :.:::::::::::.::::
NP_001 VSIVVAVFIFCWLPFYIFNVSSVSMAISPTPALKGMFDFVVVLTYANSCANPILYAFLSD
260 270 280 290 300 310
320 330 340 350 360 370
pF1KE9 NFRRSFQRVLCLRCCLLEGAGGAEEEPLDYYATALKSKGGAGCMCPPLPCQQEALQPEPG
::..::: ::::
NP_001 NFKKSFQNVLCLVKVSGTDDGERSDSKQDKSRLNETTETQRTLLNGDLQTSI
320 330 340 350 360
>>XP_006724374 (OMIM: 182453) PREDICTED: somatostatin re (418 aa)
initn: 949 init1: 577 opt: 1060 Z-score: 1119.7 bits: 216.1 E(85289): 1.3e-55
Smith-Waterman score: 1069; 50.3% identity (76.5% similar) in 340 aa overlap (1-326:3-328)
10 20 30 40 50
pF1KE9 MSAPSTLPPGGE-EGLGTAWPSAA---NASSAPAEAEEAVAGPGDARAAGMVAIQCIY
: ::.. .: :. ..::: : :.:..:. : ::.: : : .:
XP_006 MDMLHPSSVSTTSEPENASSAWPPDATLGNVSAGPSPAGLAVSG---------VLIPLVY
10 20 30 40 50
60 70 80 90 100 110
pF1KE9 ALVCLVGLVGNALVIFVILRYAKMKTATNIYLLNLAVADELFMLSVPFVASSAALRHWPF
.::.:::.::.:::.:.::.. ..::.:.::::.:::::::..::.:.. :: .:::
XP_006 LVVCVVGLLGNSLVIYVVLRHTASPSVTNVYILNLALADELFMLGLPFLAAQNALSYWPF
60 70 80 90 100 110
120 130 140 150 160 170
pF1KE9 GSVLCRAVLSVDGLNMFTSVFCLTVLSVDRYVAVVHPLRAATYRRPSVAKLINLGVWLAS
::..:: :..:::.:.:::.:::::.:::::.::::: :.: .: ::. .. .::.::
XP_006 GSLMCRLVMAVDGINQFTSIFCLTVMSVDRYLAVVHPTRSARWRTAPVARTVSAAVWVAS
120 130 140 150 160 170
180 190 200 210 220 230
pF1KE9 LLVTLPIAIFADTRPARGGQAVACNLQWPHPA--WSAVFVVYTFLLGFLLPVLAIGLCYL
.:.::...:. . : :: .. :..:::.:: : : :..:: :::. :.:.: ::::
XP_006 AVVVLPVVVFSGV-P-RGMST--CHMQWPEPAAAWRAGFIIYTAALGFFGPLLVICLCYL
180 190 200 210 220
240 250 260 270 280
pF1KE9 LIVGKMRAVALRAGW----QQRRRSEKKITRLVLMVVVVFVLCWMPFYVVQLLNLV--VT
::: :.:... :. : :.:::::...::.:. ::..::::::::::....:.: .
XP_006 LIVVKVRSAGRRV-WAPSCQRRRRSERRVTRMVVAVVALFVLCWMPFYVLNIVNVVCPLP
230 240 250 260 270 280
290 300 310 320 330 340
pF1KE9 SLDATVNHVSLI--LSYANSCANPILYGFLSDNFRRSFQRVLCLRCCLLEGAGGAEEEPL
: . :. : ::::::::::::::: :...:.:::
XP_006 EEPAFFGLYFLVVALPYANSCANPILYGFLSYRFKQGFRRVLLRPSRRVRSQEPTVGPPE
290 300 310 320 330 340
350 360 370 380
pF1KE9 DYYATALKSKGGAGCMCPPLPCQQEALQPEPGRKRIPLTRTTTF
XP_006 KTEEEDEEEEDGEESREGGKGKEMNGRVSQITQPGTSGQERPPSRVASKEQQLLPQEAST
350 360 370 380 390 400
>>XP_016884413 (OMIM: 182453) PREDICTED: somatostatin re (418 aa)
initn: 949 init1: 577 opt: 1060 Z-score: 1119.7 bits: 216.1 E(85289): 1.3e-55
Smith-Waterman score: 1069; 50.3% identity (76.5% similar) in 340 aa overlap (1-326:3-328)
10 20 30 40 50
pF1KE9 MSAPSTLPPGGE-EGLGTAWPSAA---NASSAPAEAEEAVAGPGDARAAGMVAIQCIY
: ::.. .: :. ..::: : :.:..:. : ::.: : : .:
XP_016 MDMLHPSSVSTTSEPENASSAWPPDATLGNVSAGPSPAGLAVSG---------VLIPLVY
10 20 30 40 50
60 70 80 90 100 110
pF1KE9 ALVCLVGLVGNALVIFVILRYAKMKTATNIYLLNLAVADELFMLSVPFVASSAALRHWPF
.::.:::.::.:::.:.::.. ..::.:.::::.:::::::..::.:.. :: .:::
XP_016 LVVCVVGLLGNSLVIYVVLRHTASPSVTNVYILNLALADELFMLGLPFLAAQNALSYWPF
60 70 80 90 100 110
120 130 140 150 160 170
pF1KE9 GSVLCRAVLSVDGLNMFTSVFCLTVLSVDRYVAVVHPLRAATYRRPSVAKLINLGVWLAS
::..:: :..:::.:.:::.:::::.:::::.::::: :.: .: ::. .. .::.::
XP_016 GSLMCRLVMAVDGINQFTSIFCLTVMSVDRYLAVVHPTRSARWRTAPVARTVSAAVWVAS
120 130 140 150 160 170
180 190 200 210 220 230
pF1KE9 LLVTLPIAIFADTRPARGGQAVACNLQWPHPA--WSAVFVVYTFLLGFLLPVLAIGLCYL
.:.::...:. . : :: .. :..:::.:: : : :..:: :::. :.:.: ::::
XP_016 AVVVLPVVVFSGV-P-RGMST--CHMQWPEPAAAWRAGFIIYTAALGFFGPLLVICLCYL
180 190 200 210 220
240 250 260 270 280
pF1KE9 LIVGKMRAVALRAGW----QQRRRSEKKITRLVLMVVVVFVLCWMPFYVVQLLNLV--VT
::: :.:... :. : :.:::::...::.:. ::..::::::::::....:.: .
XP_016 LIVVKVRSAGRRV-WAPSCQRRRRSERRVTRMVVAVVALFVLCWMPFYVLNIVNVVCPLP
230 240 250 260 270 280
290 300 310 320 330 340
pF1KE9 SLDATVNHVSLI--LSYANSCANPILYGFLSDNFRRSFQRVLCLRCCLLEGAGGAEEEPL
: . :. : ::::::::::::::: :...:.:::
XP_016 EEPAFFGLYFLVVALPYANSCANPILYGFLSYRFKQGFRRVLLRPSRRVRSQEPTVGPPE
290 300 310 320 330 340
350 360 370 380
pF1KE9 DYYATALKSKGGAGCMCPPLPCQQEALQPEPGRKRIPLTRTTTF
XP_016 KTEEEDEEEEDGEESREGGKGKEMNGRVSQITQPGTSGQERPPSRVASKEQQLLPQEAST
350 360 370 380 390 400
>>XP_005261778 (OMIM: 182453) PREDICTED: somatostatin re (418 aa)
initn: 949 init1: 577 opt: 1060 Z-score: 1119.7 bits: 216.1 E(85289): 1.3e-55
Smith-Waterman score: 1069; 50.3% identity (76.5% similar) in 340 aa overlap (1-326:3-328)
10 20 30 40 50
pF1KE9 MSAPSTLPPGGE-EGLGTAWPSAA---NASSAPAEAEEAVAGPGDARAAGMVAIQCIY
: ::.. .: :. ..::: : :.:..:. : ::.: : : .:
XP_005 MDMLHPSSVSTTSEPENASSAWPPDATLGNVSAGPSPAGLAVSG---------VLIPLVY
10 20 30 40 50
60 70 80 90 100 110
pF1KE9 ALVCLVGLVGNALVIFVILRYAKMKTATNIYLLNLAVADELFMLSVPFVASSAALRHWPF
.::.:::.::.:::.:.::.. ..::.:.::::.:::::::..::.:.. :: .:::
XP_005 LVVCVVGLLGNSLVIYVVLRHTASPSVTNVYILNLALADELFMLGLPFLAAQNALSYWPF
60 70 80 90 100 110
120 130 140 150 160 170
pF1KE9 GSVLCRAVLSVDGLNMFTSVFCLTVLSVDRYVAVVHPLRAATYRRPSVAKLINLGVWLAS
::..:: :..:::.:.:::.:::::.:::::.::::: :.: .: ::. .. .::.::
XP_005 GSLMCRLVMAVDGINQFTSIFCLTVMSVDRYLAVVHPTRSARWRTAPVARTVSAAVWVAS
120 130 140 150 160 170
180 190 200 210 220 230
pF1KE9 LLVTLPIAIFADTRPARGGQAVACNLQWPHPA--WSAVFVVYTFLLGFLLPVLAIGLCYL
.:.::...:. . : :: .. :..:::.:: : : :..:: :::. :.:.: ::::
XP_005 AVVVLPVVVFSGV-P-RGMST--CHMQWPEPAAAWRAGFIIYTAALGFFGPLLVICLCYL
180 190 200 210 220
240 250 260 270 280
pF1KE9 LIVGKMRAVALRAGW----QQRRRSEKKITRLVLMVVVVFVLCWMPFYVVQLLNLV--VT
::: :.:... :. : :.:::::...::.:. ::..::::::::::....:.: .
XP_005 LIVVKVRSAGRRV-WAPSCQRRRRSERRVTRMVVAVVALFVLCWMPFYVLNIVNVVCPLP
230 240 250 260 270 280
290 300 310 320 330 340
pF1KE9 SLDATVNHVSLI--LSYANSCANPILYGFLSDNFRRSFQRVLCLRCCLLEGAGGAEEEPL
: . :. : ::::::::::::::: :...:.:::
XP_005 EEPAFFGLYFLVVALPYANSCANPILYGFLSYRFKQGFRRVLLRPSRRVRSQEPTVGPPE
290 300 310 320 330 340
350 360 370 380
pF1KE9 DYYATALKSKGGAGCMCPPLPCQQEALQPEPGRKRIPLTRTTTF
XP_005 KTEEEDEEEEDGEESREGGKGKEMNGRVSQITQPGTSGQERPPSRVASKEQQLLPQEAST
350 360 370 380 390 400
>>XP_011528651 (OMIM: 182453) PREDICTED: somatostatin re (418 aa)
initn: 949 init1: 577 opt: 1060 Z-score: 1119.7 bits: 216.1 E(85289): 1.3e-55
Smith-Waterman score: 1069; 50.3% identity (76.5% similar) in 340 aa overlap (1-326:3-328)
10 20 30 40 50
pF1KE9 MSAPSTLPPGGE-EGLGTAWPSAA---NASSAPAEAEEAVAGPGDARAAGMVAIQCIY
: ::.. .: :. ..::: : :.:..:. : ::.: : : .:
XP_011 MDMLHPSSVSTTSEPENASSAWPPDATLGNVSAGPSPAGLAVSG---------VLIPLVY
10 20 30 40 50
60 70 80 90 100 110
pF1KE9 ALVCLVGLVGNALVIFVILRYAKMKTATNIYLLNLAVADELFMLSVPFVASSAALRHWPF
.::.:::.::.:::.:.::.. ..::.:.::::.:::::::..::.:.. :: .:::
XP_011 LVVCVVGLLGNSLVIYVVLRHTASPSVTNVYILNLALADELFMLGLPFLAAQNALSYWPF
60 70 80 90 100 110
120 130 140 150 160 170
pF1KE9 GSVLCRAVLSVDGLNMFTSVFCLTVLSVDRYVAVVHPLRAATYRRPSVAKLINLGVWLAS
::..:: :..:::.:.:::.:::::.:::::.::::: :.: .: ::. .. .::.::
XP_011 GSLMCRLVMAVDGINQFTSIFCLTVMSVDRYLAVVHPTRSARWRTAPVARTVSAAVWVAS
120 130 140 150 160 170
180 190 200 210 220 230
pF1KE9 LLVTLPIAIFADTRPARGGQAVACNLQWPHPA--WSAVFVVYTFLLGFLLPVLAIGLCYL
.:.::...:. . : :: .. :..:::.:: : : :..:: :::. :.:.: ::::
XP_011 AVVVLPVVVFSGV-P-RGMST--CHMQWPEPAAAWRAGFIIYTAALGFFGPLLVICLCYL
180 190 200 210 220
240 250 260 270 280
pF1KE9 LIVGKMRAVALRAGW----QQRRRSEKKITRLVLMVVVVFVLCWMPFYVVQLLNLV--VT
::: :.:... :. : :.:::::...::.:. ::..::::::::::....:.: .
XP_011 LIVVKVRSAGRRV-WAPSCQRRRRSERRVTRMVVAVVALFVLCWMPFYVLNIVNVVCPLP
230 240 250 260 270 280
290 300 310 320 330 340
pF1KE9 SLDATVNHVSLI--LSYANSCANPILYGFLSDNFRRSFQRVLCLRCCLLEGAGGAEEEPL
: . :. : ::::::::::::::: :...:.:::
XP_011 EEPAFFGLYFLVVALPYANSCANPILYGFLSYRFKQGFRRVLLRPSRRVRSQEPTVGPPE
290 300 310 320 330 340
350 360 370 380
pF1KE9 DYYATALKSKGGAGCMCPPLPCQQEALQPEPGRKRIPLTRTTTF
XP_011 KTEEEDEEEEDGEESREGGKGKEMNGRVSQITQPGTSGQERPPSRVASKEQQLLPQEAST
350 360 370 380 390 400
>>XP_016884412 (OMIM: 182453) PREDICTED: somatostatin re (418 aa)
initn: 949 init1: 577 opt: 1060 Z-score: 1119.7 bits: 216.1 E(85289): 1.3e-55
Smith-Waterman score: 1069; 50.3% identity (76.5% similar) in 340 aa overlap (1-326:3-328)
10 20 30 40 50
pF1KE9 MSAPSTLPPGGE-EGLGTAWPSAA---NASSAPAEAEEAVAGPGDARAAGMVAIQCIY
: ::.. .: :. ..::: : :.:..:. : ::.: : : .:
XP_016 MDMLHPSSVSTTSEPENASSAWPPDATLGNVSAGPSPAGLAVSG---------VLIPLVY
10 20 30 40 50
60 70 80 90 100 110
pF1KE9 ALVCLVGLVGNALVIFVILRYAKMKTATNIYLLNLAVADELFMLSVPFVASSAALRHWPF
.::.:::.::.:::.:.::.. ..::.:.::::.:::::::..::.:.. :: .:::
XP_016 LVVCVVGLLGNSLVIYVVLRHTASPSVTNVYILNLALADELFMLGLPFLAAQNALSYWPF
60 70 80 90 100 110
120 130 140 150 160 170
pF1KE9 GSVLCRAVLSVDGLNMFTSVFCLTVLSVDRYVAVVHPLRAATYRRPSVAKLINLGVWLAS
::..:: :..:::.:.:::.:::::.:::::.::::: :.: .: ::. .. .::.::
XP_016 GSLMCRLVMAVDGINQFTSIFCLTVMSVDRYLAVVHPTRSARWRTAPVARTVSAAVWVAS
120 130 140 150 160 170
180 190 200 210 220 230
pF1KE9 LLVTLPIAIFADTRPARGGQAVACNLQWPHPA--WSAVFVVYTFLLGFLLPVLAIGLCYL
.:.::...:. . : :: .. :..:::.:: : : :..:: :::. :.:.: ::::
XP_016 AVVVLPVVVFSGV-P-RGMST--CHMQWPEPAAAWRAGFIIYTAALGFFGPLLVICLCYL
180 190 200 210 220
240 250 260 270 280
pF1KE9 LIVGKMRAVALRAGW----QQRRRSEKKITRLVLMVVVVFVLCWMPFYVVQLLNLV--VT
::: :.:... :. : :.:::::...::.:. ::..::::::::::....:.: .
XP_016 LIVVKVRSAGRRV-WAPSCQRRRRSERRVTRMVVAVVALFVLCWMPFYVLNIVNVVCPLP
230 240 250 260 270 280
290 300 310 320 330 340
pF1KE9 SLDATVNHVSLI--LSYANSCANPILYGFLSDNFRRSFQRVLCLRCCLLEGAGGAEEEPL
: . :. : ::::::::::::::: :...:.:::
XP_016 EEPAFFGLYFLVVALPYANSCANPILYGFLSYRFKQGFRRVLLRPSRRVRSQEPTVGPPE
290 300 310 320 330 340
350 360 370 380
pF1KE9 DYYATALKSKGGAGCMCPPLPCQQEALQPEPGRKRIPLTRTTTF
XP_016 KTEEEDEEEEDGEESREGGKGKEMNGRVSQITQPGTSGQERPPSRVASKEQQLLPQEAST
350 360 370 380 390 400
388 residues in 1 query sequences
60827320 residues in 85289 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Sun Nov 6 10:58:59 2016 done: Sun Nov 6 10:59:01 2016
Total Scan time: 8.760 Total Display time: 0.040
Function used was FASTA [36.3.4 Apr, 2011]