Result of FASTA (ccds) for
pFN21AE9433
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KE9433, 515 aa
1>>>pF1KE9433 515 - 515 aa - 515 aa
Library: human.CCDS.faa
18511270 residues in 32554 sequences
Statistics: Expectation_n fit: rho(ln(x))= 6.9785+/-0.00104; mu= 10.7446+/- 0.063
mean_var=127.9883+/-31.905, 0's: 0 Z-trim(107.4): 205 B-trim: 1202 in 2/48
Lambda= 0.113368
statistics sampled from 9309 (9577) to 9309 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.648), E-opt: 0.2 (0.294), width: 16
Scan time: 2.510
The best scores are: opt bits E(32554)
CCDS10051.1 GPR176 gene_id:11245|Hs108|chr15 ( 515) 3370 562.9 3e-160
CCDS61589.1 GPR176 gene_id:11245|Hs108|chr15 ( 514) 3207 536.3 3.2e-152
CCDS61588.1 GPR176 gene_id:11245|Hs108|chr15 ( 470) 3010 504.0 1.5e-142
CCDS7606.1 PRLHR gene_id:2834|Hs108|chr10 ( 370) 366 71.5 1.9e-12
>>CCDS10051.1 GPR176 gene_id:11245|Hs108|chr15 (515 aa)
initn: 3370 init1: 3370 opt: 3370 Z-score: 2990.3 bits: 562.9 E(32554): 3e-160
Smith-Waterman score: 3370; 100.0% identity (100.0% similar) in 515 aa overlap (1-515:1-515)
10 20 30 40 50 60
pF1KE9 MGHNGSWISPNASEPHNASGAEAAGVNRSALGEFGEAQLYRQFTTTVQVVIFIGSLLGNF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS10 MGHNGSWISPNASEPHNASGAEAAGVNRSALGEFGEAQLYRQFTTTVQVVIFIGSLLGNF
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE9 MVLWSTCRTTVFKSVTNRFIKNLACSGICASLVCVPFDIILSTSPHCCWWIYTMLFCKVV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS10 MVLWSTCRTTVFKSVTNRFIKNLACSGICASLVCVPFDIILSTSPHCCWWIYTMLFCKVV
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE9 KFLHKVFCSVTILSFPAIALDRYYSVLYPLERKISDAKSRELVMYIWAHAVVASVPVFAV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS10 KFLHKVFCSVTILSFPAIALDRYYSVLYPLERKISDAKSRELVMYIWAHAVVASVPVFAV
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE9 TNVADIYATSTCTEVWSNSLGHLVYVLVYNITTVIVPVVVVFLFLILIRRALSASQKKKV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS10 TNVADIYATSTCTEVWSNSLGHLVYVLVYNITTVIVPVVVVFLFLILIRRALSASQKKKV
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE9 IIAALRTPQNTISIPYASQREAELHATLLSMVMVFILCSVPYATLVVYQTVLNVPDTSVF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS10 IIAALRTPQNTISIPYASQREAELHATLLSMVMVFILCSVPYATLVVYQTVLNVPDTSVF
250 260 270 280 290 300
310 320 330 340 350 360
pF1KE9 LLLTAVWLPKVSLLANPVLFLTVNKSVRKCLIGTLVQLHHRYSRRNVVSTGSGMAEASLE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS10 LLLTAVWLPKVSLLANPVLFLTVNKSVRKCLIGTLVQLHHRYSRRNVVSTGSGMAEASLE
310 320 330 340 350 360
370 380 390 400 410 420
pF1KE9 PSIRSGSQLLEMFHIGQQQIFKPTEDEEESEAKYIGSADFQAKEIFSTCLEGEQGPQFAP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS10 PSIRSGSQLLEMFHIGQQQIFKPTEDEEESEAKYIGSADFQAKEIFSTCLEGEQGPQFAP
370 380 390 400 410 420
430 440 450 460 470 480
pF1KE9 SAPPLSTVDSVSQVAPAAPVEPETFPDKYSLQFGFGPFELPPQWLSETRNSKKRLLPPLG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS10 SAPPLSTVDSVSQVAPAAPVEPETFPDKYSLQFGFGPFELPPQWLSETRNSKKRLLPPLG
430 440 450 460 470 480
490 500 510
pF1KE9 NTPEELIQTKVPKVGRVERKMSRNNKVSIFPKVDS
:::::::::::::::::::::::::::::::::::
CCDS10 NTPEELIQTKVPKVGRVERKMSRNNKVSIFPKVDS
490 500 510
>>CCDS61589.1 GPR176 gene_id:11245|Hs108|chr15 (514 aa)
initn: 3216 init1: 2858 opt: 3207 Z-score: 2846.3 bits: 536.3 E(32554): 3.2e-152
Smith-Waterman score: 3207; 96.1% identity (97.7% similar) in 517 aa overlap (1-515:1-514)
10 20 30 40 50
pF1KE9 MGHNGSWISPNASEPHNASGAEAAGVNRSALGEFGEAQLYRQFTTTVQVVIFIGSLL--G
::::::::::::::::::::::::::::::::::::::::::::::::::::::::: :
CCDS61 MGHNGSWISPNASEPHNASGAEAAGVNRSALGEFGEAQLYRQFTTTVQVVIFIGSLLEFG
10 20 30 40 50 60
60 70 80 90 100 110
pF1KE9 NFMVLWSTCRTTVFKSVTNRFIKNLACSGICASLVCVPFDIILSTSPHCCWWIYTMLFCK
:. : . .. . .. .::::::::::::::::::::::::::::::::::::::::
CCDS61 NMEVTRKLDKSRL-PGI--KFIKNLACSGICASLVCVPFDIILSTSPHCCWWIYTMLFCK
70 80 90 100 110
120 130 140 150 160 170
pF1KE9 VVKFLHKVFCSVTILSFPAIALDRYYSVLYPLERKISDAKSRELVMYIWAHAVVASVPVF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS61 VVKFLHKVFCSVTILSFPAIALDRYYSVLYPLERKISDAKSRELVMYIWAHAVVASVPVF
120 130 140 150 160 170
180 190 200 210 220 230
pF1KE9 AVTNVADIYATSTCTEVWSNSLGHLVYVLVYNITTVIVPVVVVFLFLILIRRALSASQKK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS61 AVTNVADIYATSTCTEVWSNSLGHLVYVLVYNITTVIVPVVVVFLFLILIRRALSASQKK
180 190 200 210 220 230
240 250 260 270 280 290
pF1KE9 KVIIAALRTPQNTISIPYASQREAELHATLLSMVMVFILCSVPYATLVVYQTVLNVPDTS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS61 KVIIAALRTPQNTISIPYASQREAELHATLLSMVMVFILCSVPYATLVVYQTVLNVPDTS
240 250 260 270 280 290
300 310 320 330 340 350
pF1KE9 VFLLLTAVWLPKVSLLANPVLFLTVNKSVRKCLIGTLVQLHHRYSRRNVVSTGSGMAEAS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS61 VFLLLTAVWLPKVSLLANPVLFLTVNKSVRKCLIGTLVQLHHRYSRRNVVSTGSGMAEAS
300 310 320 330 340 350
360 370 380 390 400 410
pF1KE9 LEPSIRSGSQLLEMFHIGQQQIFKPTEDEEESEAKYIGSADFQAKEIFSTCLEGEQGPQF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS61 LEPSIRSGSQLLEMFHIGQQQIFKPTEDEEESEAKYIGSADFQAKEIFSTCLEGEQGPQF
360 370 380 390 400 410
420 430 440 450 460 470
pF1KE9 APSAPPLSTVDSVSQVAPAAPVEPETFPDKYSLQFGFGPFELPPQWLSETRNSKKRLLPP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS61 APSAPPLSTVDSVSQVAPAAPVEPETFPDKYSLQFGFGPFELPPQWLSETRNSKKRLLPP
420 430 440 450 460 470
480 490 500 510
pF1KE9 LGNTPEELIQTKVPKVGRVERKMSRNNKVSIFPKVDS
:::::::::::::::::::::::::::::::::::::
CCDS61 LGNTPEELIQTKVPKVGRVERKMSRNNKVSIFPKVDS
480 490 500 510
>>CCDS61588.1 GPR176 gene_id:11245|Hs108|chr15 (470 aa)
initn: 3010 init1: 3010 opt: 3010 Z-score: 2672.7 bits: 504.0 E(32554): 1.5e-142
Smith-Waterman score: 3010; 98.7% identity (99.6% similar) in 466 aa overlap (50-515:5-470)
20 30 40 50 60 70
pF1KE9 GAEAAGVNRSALGEFGEAQLYRQFTTTVQVVIFIGSLLGNFMVLWSTCRTTVFKSVTNRF
...:. :::::::::::::::::::::::
CCDS61 MPAPLLLISRTLGNFMVLWSTCRTTVFKSVTNRF
10 20 30
80 90 100 110 120 130
pF1KE9 IKNLACSGICASLVCVPFDIILSTSPHCCWWIYTMLFCKVVKFLHKVFCSVTILSFPAIA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS61 IKNLACSGICASLVCVPFDIILSTSPHCCWWIYTMLFCKVVKFLHKVFCSVTILSFPAIA
40 50 60 70 80 90
140 150 160 170 180 190
pF1KE9 LDRYYSVLYPLERKISDAKSRELVMYIWAHAVVASVPVFAVTNVADIYATSTCTEVWSNS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS61 LDRYYSVLYPLERKISDAKSRELVMYIWAHAVVASVPVFAVTNVADIYATSTCTEVWSNS
100 110 120 130 140 150
200 210 220 230 240 250
pF1KE9 LGHLVYVLVYNITTVIVPVVVVFLFLILIRRALSASQKKKVIIAALRTPQNTISIPYASQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS61 LGHLVYVLVYNITTVIVPVVVVFLFLILIRRALSASQKKKVIIAALRTPQNTISIPYASQ
160 170 180 190 200 210
260 270 280 290 300 310
pF1KE9 REAELHATLLSMVMVFILCSVPYATLVVYQTVLNVPDTSVFLLLTAVWLPKVSLLANPVL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS61 REAELHATLLSMVMVFILCSVPYATLVVYQTVLNVPDTSVFLLLTAVWLPKVSLLANPVL
220 230 240 250 260 270
320 330 340 350 360 370
pF1KE9 FLTVNKSVRKCLIGTLVQLHHRYSRRNVVSTGSGMAEASLEPSIRSGSQLLEMFHIGQQQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS61 FLTVNKSVRKCLIGTLVQLHHRYSRRNVVSTGSGMAEASLEPSIRSGSQLLEMFHIGQQQ
280 290 300 310 320 330
380 390 400 410 420 430
pF1KE9 IFKPTEDEEESEAKYIGSADFQAKEIFSTCLEGEQGPQFAPSAPPLSTVDSVSQVAPAAP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS61 IFKPTEDEEESEAKYIGSADFQAKEIFSTCLEGEQGPQFAPSAPPLSTVDSVSQVAPAAP
340 350 360 370 380 390
440 450 460 470 480 490
pF1KE9 VEPETFPDKYSLQFGFGPFELPPQWLSETRNSKKRLLPPLGNTPEELIQTKVPKVGRVER
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS61 VEPETFPDKYSLQFGFGPFELPPQWLSETRNSKKRLLPPLGNTPEELIQTKVPKVGRVER
400 410 420 430 440 450
500 510
pF1KE9 KMSRNNKVSIFPKVDS
::::::::::::::::
CCDS61 KMSRNNKVSIFPKVDS
460 470
>>CCDS7606.1 PRLHR gene_id:2834|Hs108|chr10 (370 aa)
initn: 255 init1: 131 opt: 366 Z-score: 337.1 bits: 71.5 E(32554): 1.9e-12
Smith-Waterman score: 366; 25.6% identity (56.5% similar) in 336 aa overlap (11-336:27-351)
10 20 30 40
pF1KE9 MGHNGSWISPNASEPHNASGAEAAGVNRSALGEFGEAQLYRQFT
: : .:... .::.. :. : :: .:.
CCDS76 MASSTTRGPRVSDLFSGLPPAVTTPANQSAEASAGNGSVAGADAPAVTPFQSLQLVHQLK
10 20 30 40 50 60
50 60 70 80 90 100
pF1KE9 TTV----QVVIFIGSLLGNFMVLWSTCRTTVFKSVTNRFIKNLACSGICASLVCVPFDII
. .::. .: :.:: ... :. ...::: .: ::: : . .:::. .
CCDS76 GLIVLLYSVVVVVG-LVGNCLLVLVIARVRRLHNVTNFLIGNLALSDVLMCTACVPLTLA
70 80 90 100 110
110 120 130 140 150 160
pF1KE9 LSTSPHCCWWIYTMLFCKVVKFLHKVFCSVTILSFPAIALDRYYSVLYPLERKISDAKSR
. :. :.. .:..: ::. : :..... .::.::: ...::.:.:: :
CCDS76 YAFEPR--GWVFGGGLCHLVFFLQPVTVYVSVFTLTTIAVDRYVVLVHPLRRRISLRLSA
120 130 140 150 160 170
170 180 190 200 210
pF1KE9 ELVMYIWAHAVVASVPVFAVTNVADI--YATSTCTEVW-SNSLGHLVYVLVYNITTVIVP
:. ::: ..: ..:. . : ... . . : : : :. . .:. ..: ..:
CCDS76 YAVLAIWALSAVLALPAAVHTYHVELKPHDVRLCEEFWGSQERQRQLYAWGLLLVTYLLP
180 190 200 210 220 230
220 230 240 250 260 270
pF1KE9 VVVVFLFLILIRRALSASQKKKVIIAALRTPQNTISIPYASQREAELHATLLSMVMVFIL
..:..: . . :.. ...:. . . : . :. . :. .:.:: .
CCDS76 LLVILLSYVRV----SVKLRNRVVPGCVTQSQA----DWDRARRRRTFCLLVVIVVVFAV
240 250 260 270 280
280 290 300 310 320 330
pF1KE9 CSVPYATLVVYQTVL-NVPDTSVFLLLTAV--WLPKVSLLANPVLFLTVNKSVRKCLIGT
: .: .. . . . .. : .: :. . :: : :: .. .. : :. :
CCDS76 CWLPLHVFNLLRDLDPHAIDPYAFGLVQLLCHWLAMSSACYNPFIYAWLHDSFREELRKL
290 300 310 320 330 340
340 350 360 370 380 390
pF1KE9 LVQLHHRYSRRNVVSTGSGMAEASLEPSIRSGSQLLEMFHIGQQQIFKPTEDEEESEAKY
::
CCDS76 LVAWPRKIAPHGQNMTVSVVI
350 360 370
515 residues in 1 query sequences
18511270 residues in 32554 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Sun Nov 6 14:20:16 2016 done: Sun Nov 6 14:20:17 2016
Total Scan time: 2.510 Total Display time: 0.020
Function used was FASTA [36.3.4 Apr, 2011]