Result of FASTA (omim) for
pFN21AE9431
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KE9431, 609 aa
1>>>pF1KE9431 609 - 609 aa - 609 aa
Library: /omim/omim.rfq.tfa
60827320 residues in 85289 sequences
Statistics: Expectation_n fit: rho(ln(x))= 11.2828+/-0.000425; mu= -5.6619+/- 0.027
mean_var=405.7990+/-84.668, 0's: 0 Z-trim(122.5): 4 B-trim: 2029 in 1/61
Lambda= 0.063668
statistics sampled from 40835 (40839) to 40835 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.771), E-opt: 0.2 (0.479), width: 16
Scan time: 11.640
The best scores are: opt bits E(85289)
XP_016856739 (OMIM: 614269) PREDICTED: probable G- ( 609) 4138 394.4 6.1e-109
NP_997253 (OMIM: 614269) probable G-protein couple ( 609) 4138 394.4 6.1e-109
XP_011539736 (OMIM: 614269) PREDICTED: probable G- ( 609) 4138 394.4 6.1e-109
XP_016856740 (OMIM: 614269) PREDICTED: probable G- ( 454) 2615 254.3 6.4e-67
>>XP_016856739 (OMIM: 614269) PREDICTED: probable G-prot (609 aa)
initn: 4138 init1: 4138 opt: 4138 Z-score: 2076.8 bits: 394.4 E(85289): 6.1e-109
Smith-Waterman score: 4138; 99.8% identity (100.0% similar) in 609 aa overlap (1-609:1-609)
10 20 30 40 50 60
pF1KE9 MSDERRLPGSAVGWLVCGGLSLLANAWGILSVGAKQKKWKPLEFLLCTLAATHMLNVAVP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 MSDERRLPGSAVGWLVCGGLSLLANAWGILSVGAKQKKWKPLEFLLCTLAATHMLNVAVP
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE9 IATYSVVQLRRQRPDFEWNEGLCKVFVSTFYTLTLATCFSVTSLSYHRMWMVCWPVNYRL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 IATYSVVQLRRQRPDFEWNEGLCKVFVSTFYTLTLATCFSVTSLSYHRMWMVCWPVNYRL
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE9 SNAKKQAVHTVMGIWMVSFILSALPAVGWHDTSERFYTHGCRFIVAEIGLGFGVCFLLLV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 SNAKKQAVHTVMGIWMVSFILSALPAVGWHDTSERFYTHGCRFIVAEIGLGFGVCFLLLV
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE9 GGSVAMGVICTAIALFQTLAVQVGRQADHRAFTVPTIVVEDAQGKRRSSIDGSEPAKTSL
::::::::::::::::::::::::::::.:::::::::::::::::::::::::::::::
XP_016 GGSVAMGVICTAIALFQTLAVQVGRQADRRAFTVPTIVVEDAQGKRRSSIDGSEPAKTSL
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE9 QTTGLVTTIVFIYDCLMGFPVLVVSFSSLRADASAPWMALCVLWCSVAQALLLPVFLWAC
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 QTTGLVTTIVFIYDCLMGFPVLVVSFSSLRADASAPWMALCVLWCSVAQALLLPVFLWAC
250 260 270 280 290 300
310 320 330 340 350 360
pF1KE9 DRYRADLKAVREKCMALMANDEESDDETSLEGGISPDLVLERSLDYGYGGDFVALDRMAK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 DRYRADLKAVREKCMALMANDEESDDETSLEGGISPDLVLERSLDYGYGGDFVALDRMAK
310 320 330 340 350 360
370 380 390 400 410 420
pF1KE9 YEISALEGGLPQLYPLRPLQEDKMQYLQVPPTRRFSHDDADVWAAVPLPAFLPRWGSGED
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 YEISALEGGLPQLYPLRPLQEDKMQYLQVPPTRRFSHDDADVWAAVPLPAFLPRWGSGED
370 380 390 400 410 420
430 440 450 460 470 480
pF1KE9 LAALAHLVLPAGPERRRASLLAFAEDAPPSRARRRSAESLLSLRPSALDSGPRGARDSPP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 LAALAHLVLPAGPERRRASLLAFAEDAPPSRARRRSAESLLSLRPSALDSGPRGARDSPP
430 440 450 460 470 480
490 500 510 520 530 540
pF1KE9 GSPRRRPGPGPRSASASLLPDAFALTAFECEPQALRRPPGPFPAAPAAPDGADPGEAPTP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 GSPRRRPGPGPRSASASLLPDAFALTAFECEPQALRRPPGPFPAAPAAPDGADPGEAPTP
490 500 510 520 530 540
550 560 570 580 590 600
pF1KE9 PSSAQRSPGPRPSAHSHAGSLRPGLSASWGEPGGLRAAGGGGSTSSFLSSPSESSGYATL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 PSSAQRSPGPRPSAHSHAGSLRPGLSASWGEPGGLRAAGGGGSTSSFLSSPSESSGYATL
550 560 570 580 590 600
pF1KE9 HSDSLGSAS
:::::::::
XP_016 HSDSLGSAS
>>NP_997253 (OMIM: 614269) probable G-protein coupled re (609 aa)
initn: 4138 init1: 4138 opt: 4138 Z-score: 2076.8 bits: 394.4 E(85289): 6.1e-109
Smith-Waterman score: 4138; 99.8% identity (100.0% similar) in 609 aa overlap (1-609:1-609)
10 20 30 40 50 60
pF1KE9 MSDERRLPGSAVGWLVCGGLSLLANAWGILSVGAKQKKWKPLEFLLCTLAATHMLNVAVP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_997 MSDERRLPGSAVGWLVCGGLSLLANAWGILSVGAKQKKWKPLEFLLCTLAATHMLNVAVP
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE9 IATYSVVQLRRQRPDFEWNEGLCKVFVSTFYTLTLATCFSVTSLSYHRMWMVCWPVNYRL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_997 IATYSVVQLRRQRPDFEWNEGLCKVFVSTFYTLTLATCFSVTSLSYHRMWMVCWPVNYRL
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE9 SNAKKQAVHTVMGIWMVSFILSALPAVGWHDTSERFYTHGCRFIVAEIGLGFGVCFLLLV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_997 SNAKKQAVHTVMGIWMVSFILSALPAVGWHDTSERFYTHGCRFIVAEIGLGFGVCFLLLV
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE9 GGSVAMGVICTAIALFQTLAVQVGRQADHRAFTVPTIVVEDAQGKRRSSIDGSEPAKTSL
::::::::::::::::::::::::::::.:::::::::::::::::::::::::::::::
NP_997 GGSVAMGVICTAIALFQTLAVQVGRQADRRAFTVPTIVVEDAQGKRRSSIDGSEPAKTSL
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE9 QTTGLVTTIVFIYDCLMGFPVLVVSFSSLRADASAPWMALCVLWCSVAQALLLPVFLWAC
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_997 QTTGLVTTIVFIYDCLMGFPVLVVSFSSLRADASAPWMALCVLWCSVAQALLLPVFLWAC
250 260 270 280 290 300
310 320 330 340 350 360
pF1KE9 DRYRADLKAVREKCMALMANDEESDDETSLEGGISPDLVLERSLDYGYGGDFVALDRMAK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_997 DRYRADLKAVREKCMALMANDEESDDETSLEGGISPDLVLERSLDYGYGGDFVALDRMAK
310 320 330 340 350 360
370 380 390 400 410 420
pF1KE9 YEISALEGGLPQLYPLRPLQEDKMQYLQVPPTRRFSHDDADVWAAVPLPAFLPRWGSGED
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_997 YEISALEGGLPQLYPLRPLQEDKMQYLQVPPTRRFSHDDADVWAAVPLPAFLPRWGSGED
370 380 390 400 410 420
430 440 450 460 470 480
pF1KE9 LAALAHLVLPAGPERRRASLLAFAEDAPPSRARRRSAESLLSLRPSALDSGPRGARDSPP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_997 LAALAHLVLPAGPERRRASLLAFAEDAPPSRARRRSAESLLSLRPSALDSGPRGARDSPP
430 440 450 460 470 480
490 500 510 520 530 540
pF1KE9 GSPRRRPGPGPRSASASLLPDAFALTAFECEPQALRRPPGPFPAAPAAPDGADPGEAPTP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_997 GSPRRRPGPGPRSASASLLPDAFALTAFECEPQALRRPPGPFPAAPAAPDGADPGEAPTP
490 500 510 520 530 540
550 560 570 580 590 600
pF1KE9 PSSAQRSPGPRPSAHSHAGSLRPGLSASWGEPGGLRAAGGGGSTSSFLSSPSESSGYATL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_997 PSSAQRSPGPRPSAHSHAGSLRPGLSASWGEPGGLRAAGGGGSTSSFLSSPSESSGYATL
550 560 570 580 590 600
pF1KE9 HSDSLGSAS
:::::::::
NP_997 HSDSLGSAS
>>XP_011539736 (OMIM: 614269) PREDICTED: probable G-prot (609 aa)
initn: 4138 init1: 4138 opt: 4138 Z-score: 2076.8 bits: 394.4 E(85289): 6.1e-109
Smith-Waterman score: 4138; 99.8% identity (100.0% similar) in 609 aa overlap (1-609:1-609)
10 20 30 40 50 60
pF1KE9 MSDERRLPGSAVGWLVCGGLSLLANAWGILSVGAKQKKWKPLEFLLCTLAATHMLNVAVP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 MSDERRLPGSAVGWLVCGGLSLLANAWGILSVGAKQKKWKPLEFLLCTLAATHMLNVAVP
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE9 IATYSVVQLRRQRPDFEWNEGLCKVFVSTFYTLTLATCFSVTSLSYHRMWMVCWPVNYRL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 IATYSVVQLRRQRPDFEWNEGLCKVFVSTFYTLTLATCFSVTSLSYHRMWMVCWPVNYRL
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE9 SNAKKQAVHTVMGIWMVSFILSALPAVGWHDTSERFYTHGCRFIVAEIGLGFGVCFLLLV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 SNAKKQAVHTVMGIWMVSFILSALPAVGWHDTSERFYTHGCRFIVAEIGLGFGVCFLLLV
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE9 GGSVAMGVICTAIALFQTLAVQVGRQADHRAFTVPTIVVEDAQGKRRSSIDGSEPAKTSL
::::::::::::::::::::::::::::.:::::::::::::::::::::::::::::::
XP_011 GGSVAMGVICTAIALFQTLAVQVGRQADRRAFTVPTIVVEDAQGKRRSSIDGSEPAKTSL
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE9 QTTGLVTTIVFIYDCLMGFPVLVVSFSSLRADASAPWMALCVLWCSVAQALLLPVFLWAC
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 QTTGLVTTIVFIYDCLMGFPVLVVSFSSLRADASAPWMALCVLWCSVAQALLLPVFLWAC
250 260 270 280 290 300
310 320 330 340 350 360
pF1KE9 DRYRADLKAVREKCMALMANDEESDDETSLEGGISPDLVLERSLDYGYGGDFVALDRMAK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 DRYRADLKAVREKCMALMANDEESDDETSLEGGISPDLVLERSLDYGYGGDFVALDRMAK
310 320 330 340 350 360
370 380 390 400 410 420
pF1KE9 YEISALEGGLPQLYPLRPLQEDKMQYLQVPPTRRFSHDDADVWAAVPLPAFLPRWGSGED
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 YEISALEGGLPQLYPLRPLQEDKMQYLQVPPTRRFSHDDADVWAAVPLPAFLPRWGSGED
370 380 390 400 410 420
430 440 450 460 470 480
pF1KE9 LAALAHLVLPAGPERRRASLLAFAEDAPPSRARRRSAESLLSLRPSALDSGPRGARDSPP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 LAALAHLVLPAGPERRRASLLAFAEDAPPSRARRRSAESLLSLRPSALDSGPRGARDSPP
430 440 450 460 470 480
490 500 510 520 530 540
pF1KE9 GSPRRRPGPGPRSASASLLPDAFALTAFECEPQALRRPPGPFPAAPAAPDGADPGEAPTP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 GSPRRRPGPGPRSASASLLPDAFALTAFECEPQALRRPPGPFPAAPAAPDGADPGEAPTP
490 500 510 520 530 540
550 560 570 580 590 600
pF1KE9 PSSAQRSPGPRPSAHSHAGSLRPGLSASWGEPGGLRAAGGGGSTSSFLSSPSESSGYATL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 PSSAQRSPGPRPSAHSHAGSLRPGLSASWGEPGGLRAAGGGGSTSSFLSSPSESSGYATL
550 560 570 580 590 600
pF1KE9 HSDSLGSAS
:::::::::
XP_011 HSDSLGSAS
>>XP_016856740 (OMIM: 614269) PREDICTED: probable G-prot (454 aa)
initn: 2615 init1: 2615 opt: 2615 Z-score: 1322.4 bits: 254.3 E(85289): 6.4e-67
Smith-Waterman score: 2615; 99.7% identity (100.0% similar) in 389 aa overlap (1-389:1-389)
10 20 30 40 50 60
pF1KE9 MSDERRLPGSAVGWLVCGGLSLLANAWGILSVGAKQKKWKPLEFLLCTLAATHMLNVAVP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 MSDERRLPGSAVGWLVCGGLSLLANAWGILSVGAKQKKWKPLEFLLCTLAATHMLNVAVP
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE9 IATYSVVQLRRQRPDFEWNEGLCKVFVSTFYTLTLATCFSVTSLSYHRMWMVCWPVNYRL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 IATYSVVQLRRQRPDFEWNEGLCKVFVSTFYTLTLATCFSVTSLSYHRMWMVCWPVNYRL
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE9 SNAKKQAVHTVMGIWMVSFILSALPAVGWHDTSERFYTHGCRFIVAEIGLGFGVCFLLLV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 SNAKKQAVHTVMGIWMVSFILSALPAVGWHDTSERFYTHGCRFIVAEIGLGFGVCFLLLV
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE9 GGSVAMGVICTAIALFQTLAVQVGRQADHRAFTVPTIVVEDAQGKRRSSIDGSEPAKTSL
::::::::::::::::::::::::::::.:::::::::::::::::::::::::::::::
XP_016 GGSVAMGVICTAIALFQTLAVQVGRQADRRAFTVPTIVVEDAQGKRRSSIDGSEPAKTSL
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE9 QTTGLVTTIVFIYDCLMGFPVLVVSFSSLRADASAPWMALCVLWCSVAQALLLPVFLWAC
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 QTTGLVTTIVFIYDCLMGFPVLVVSFSSLRADASAPWMALCVLWCSVAQALLLPVFLWAC
250 260 270 280 290 300
310 320 330 340 350 360
pF1KE9 DRYRADLKAVREKCMALMANDEESDDETSLEGGISPDLVLERSLDYGYGGDFVALDRMAK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 DRYRADLKAVREKCMALMANDEESDDETSLEGGISPDLVLERSLDYGYGGDFVALDRMAK
310 320 330 340 350 360
370 380 390 400 410 420
pF1KE9 YEISALEGGLPQLYPLRPLQEDKMQYLQVPPTRRFSHDDADVWAAVPLPAFLPRWGSGED
:::::::::::::::::::::::::::::
XP_016 YEISALEGGLPQLYPLRPLQEDKMQYLQVSAGLGERPHLRVTGCPELPEASPLGAHLTPS
370 380 390 400 410 420
609 residues in 1 query sequences
60827320 residues in 85289 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Mon Nov 7 17:57:42 2016 done: Mon Nov 7 17:57:44 2016
Total Scan time: 11.640 Total Display time: 0.020
Function used was FASTA [36.3.4 Apr, 2011]