Result of FASTA (omim) for
pFN21AE9429
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KE9429, 353 aa
1>>>pF1KE9429 353 - 353 aa - 353 aa
Library: /omim/omim.rfq.tfa
60827320 residues in 85289 sequences
Statistics: Expectation_n fit: rho(ln(x))= 4.3352+/-0.000486; mu= 22.8790+/- 0.031
mean_var=133.0835+/-36.375, 0's: 0 Z-trim(109.0): 306 B-trim: 1177 in 1/53
Lambda= 0.111176
statistics sampled from 16683 (17153) to 16683 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.54), E-opt: 0.2 (0.201), width: 16
Scan time: 7.080
The best scores are: opt bits E(85289)
NP_001318006 (OMIM: 609046) probable G-protein cou ( 374) 968 167.6 3.9e-41
NP_001318005 (OMIM: 609046) probable G-protein cou ( 374) 968 167.6 3.9e-41
NP_861455 (OMIM: 609046) probable G-protein couple ( 462) 968 167.8 4.3e-41
NP_847899 (OMIM: 601268) C-C chemokine receptor ty ( 355) 272 56.0 1.5e-07
XP_006713023 (OMIM: 601268) PREDICTED: C-C chemoki ( 355) 272 56.0 1.5e-07
XP_011531637 (OMIM: 601268) PREDICTED: C-C chemoki ( 355) 272 56.0 1.5e-07
NP_001828 (OMIM: 601268) C-C chemokine receptor ty ( 355) 272 56.0 1.5e-07
NP_001158152 (OMIM: 601268) C-C chemokine receptor ( 373) 272 56.0 1.6e-07
NP_847898 (OMIM: 601268) C-C chemokine receptor ty ( 376) 272 56.0 1.6e-07
XP_016861175 (OMIM: 601268) PREDICTED: C-C chemoki ( 410) 272 56.1 1.6e-07
XP_016861174 (OMIM: 601268) PREDICTED: C-C chemoki ( 410) 272 56.1 1.6e-07
NP_001286 (OMIM: 601159) C-C chemokine receptor ty ( 355) 264 54.7 3.7e-07
NP_005499 (OMIM: 604836) C-C chemokine receptor ty ( 360) 237 50.4 7.5e-06
XP_016861176 (OMIM: 604836) PREDICTED: C-C chemoki ( 360) 237 50.4 7.5e-06
NP_001287 (OMIM: 602648) atypical chemokine recept ( 384) 234 49.9 1.1e-05
NP_001116513 (OMIM: 601267) C-C chemokine receptor ( 374) 231 49.4 1.5e-05
NP_002368 (OMIM: 165180) proto-oncogene Mas [Homo ( 325) 227 48.7 2.2e-05
XP_011532371 (OMIM: 601267) PREDICTED: C-C chemoki ( 360) 224 48.3 3.2e-05
NP_001116868 (OMIM: 601267) C-C chemokine receptor ( 360) 224 48.3 3.2e-05
NP_848540 (OMIM: 606065) atypical chemokine recept ( 350) 223 48.1 3.5e-05
NP_057641 (OMIM: 606065) atypical chemokine recept ( 350) 223 48.1 3.5e-05
XP_011531593 (OMIM: 605163) PREDICTED: C-X-C chemo ( 342) 222 47.9 3.9e-05
NP_006555 (OMIM: 605163) C-X-C chemokine receptor ( 342) 222 47.9 3.9e-05
XP_011531592 (OMIM: 605163) PREDICTED: C-X-C chemo ( 342) 222 47.9 3.9e-05
XP_005264866 (OMIM: 605163) PREDICTED: C-X-C chemo ( 342) 222 47.9 3.9e-05
NP_001171147 (OMIM: 601404) ovarian cancer G-prote ( 365) 219 47.5 5.6e-05
NP_003476 (OMIM: 601404) ovarian cancer G-protein ( 365) 219 47.5 5.6e-05
XP_011535499 (OMIM: 601404) PREDICTED: ovarian can ( 375) 219 47.5 5.7e-05
XP_011535500 (OMIM: 601404) PREDICTED: ovarian can ( 375) 219 47.5 5.7e-05
XP_006720325 (OMIM: 601404) PREDICTED: ovarian can ( 375) 219 47.5 5.7e-05
XP_011535498 (OMIM: 601404) PREDICTED: ovarian can ( 375) 219 47.5 5.7e-05
XP_011535501 (OMIM: 601404) PREDICTED: ovarian can ( 375) 219 47.5 5.7e-05
XP_005268167 (OMIM: 601404) PREDICTED: ovarian can ( 375) 219 47.5 5.7e-05
XP_005268168 (OMIM: 601404) PREDICTED: ovarian can ( 375) 219 47.5 5.7e-05
XP_005268169 (OMIM: 601404) PREDICTED: ovarian can ( 375) 219 47.5 5.7e-05
NP_001093638 (OMIM: 601373,609532,610379,612522) C ( 352) 214 46.6 9.6e-05
NP_000570 (OMIM: 601373,609532,610379,612522) C-C ( 352) 214 46.6 9.6e-05
NP_001243495 (OMIM: 601919) proteinase-activated r ( 352) 211 46.2 0.00013
NP_004092 (OMIM: 601919) proteinase-activated rece ( 374) 211 46.2 0.00014
NP_005192 (OMIM: 601834) C-C chemokine receptor ty ( 355) 209 45.9 0.00017
NP_005903 (OMIM: 155541,601665) melanocortin recep ( 332) 206 45.3 0.00023
NP_005274 (OMIM: 600552) chemokine XC receptor 1 [ ( 333) 205 45.2 0.00025
NP_001019815 (OMIM: 600552) chemokine XC receptor ( 333) 205 45.2 0.00025
XP_016861685 (OMIM: 600552) PREDICTED: chemokine X ( 333) 205 45.2 0.00025
XP_016861690 (OMIM: 600552) PREDICTED: chemokine X ( 333) 205 45.2 0.00025
XP_016861689 (OMIM: 600552) PREDICTED: chemokine X ( 333) 205 45.2 0.00025
XP_016861686 (OMIM: 600552) PREDICTED: chemokine X ( 333) 205 45.2 0.00025
XP_016861687 (OMIM: 600552) PREDICTED: chemokine X ( 333) 205 45.2 0.00025
XP_016861688 (OMIM: 600552) PREDICTED: chemokine X ( 333) 205 45.2 0.00025
NP_001043 (OMIM: 182454) somatostatin receptor typ ( 388) 204 45.1 0.00031
>>NP_001318006 (OMIM: 609046) probable G-protein coupled (374 aa)
initn: 938 init1: 646 opt: 968 Z-score: 859.5 bits: 167.6 E(85289): 3.9e-41
Smith-Waterman score: 968; 45.7% identity (77.8% similar) in 293 aa overlap (21-310:63-354)
10 20 30 40 50
pF1KE9 MEHTHAHLAANSSLSWWSPGSACGLGFVPVVYYSLLLCLGLPANILTVII
: : : .::.:::.:: ::::...::..
NP_001 GQPRVTLLPTPHVSGLSQEFESHWPEIAERSPCVAGVIPVIYYSVLLGLGLPVSLLTAVA
40 50 60 70 80 90
60 70 80 90 100 110
pF1KE9 LSQLVARRQKSSYNYLLALAAADILVLFFIVFVDFLLEDFILNMQMPQVPDKIIEVLEFS
:..:..: .. :: :::::.:.::.. :::. :::. .: :.::. . ..:::.
NP_001 LARLATRTRRPSYYYLLALTASDIIIQVVIVFAGFLLQGAVLARQVPQAVVRTANILEFA
100 110 120 130 140 150
120 130 140 150 160 170
pF1KE9 SIHTSIWITVPLTIDRYIAVCHPLKYHTVSYPARTRKVIVSVYITCFLTSIPYYWWPNIW
. :.:.::.. ::.::: :.::::.....: :.:::..:..: . .::.::.::: ..:
NP_001 ANHASVWIAILLTVDRYTALCHPLHHRAASSPGRTRRAIAAVLSAALLTGIPFYWWLDMW
160 170 180 190 200 210
180 190 200 210 220 230
pF1KE9 TEDYISTSVHHVLIWIHCFTVYLVPCSIFFILNSIIVYKLRRKSNFRLRGYSTGKTTAIL
. .. .:: : ::.:::..::..:.. :: :...:::.. :. .::.::::
NP_001 RDTDSPRTLDEVLKWAHCLTVYFIPCGVFLVTNSAIIHRLRRRGRSGLQPR-VGKSTAIL
220 230 240 250 260 270
240 250 260 270 280 290
pF1KE9 FTITSIFATLWAPRIIMILYHLYGAPIQNRWLVHIMSDIANMLALLNTAINFFLYCFISK
. ::..:. :::::....:::.: ::.. : ::. :.:::.:.:.:: :: ::::.::
NP_001 LGITTLFTLLWAPRVFVMLYHMYVAPVHRDWRVHLALDVANMVAMLHTAANFGLYCFVSK
280 290 300 310 320 330
300 310 320 330 340
pF1KE9 RFRTMAAATLK-AFFKCQ--KQPVQFYTNHNFSITSSPWISPANSHCIKMLVYQYDKNGK
::. . ... :.. : .::
NP_001 TFRATVRQVIHDAYLPCTLASQPEGMAAKPVMEPPGLPTGAEV
340 350 360 370
>>NP_001318005 (OMIM: 609046) probable G-protein coupled (374 aa)
initn: 938 init1: 646 opt: 968 Z-score: 859.5 bits: 167.6 E(85289): 3.9e-41
Smith-Waterman score: 968; 45.7% identity (77.8% similar) in 293 aa overlap (21-310:63-354)
10 20 30 40 50
pF1KE9 MEHTHAHLAANSSLSWWSPGSACGLGFVPVVYYSLLLCLGLPANILTVII
: : : .::.:::.:: ::::...::..
NP_001 GQPRVTLLPTPHVSGLSQEFESHWPEIAERSPCVAGVIPVIYYSVLLGLGLPVSLLTAVA
40 50 60 70 80 90
60 70 80 90 100 110
pF1KE9 LSQLVARRQKSSYNYLLALAAADILVLFFIVFVDFLLEDFILNMQMPQVPDKIIEVLEFS
:..:..: .. :: :::::.:.::.. :::. :::. .: :.::. . ..:::.
NP_001 LARLATRTRRPSYYYLLALTASDIIIQVVIVFAGFLLQGAVLARQVPQAVVRTANILEFA
100 110 120 130 140 150
120 130 140 150 160 170
pF1KE9 SIHTSIWITVPLTIDRYIAVCHPLKYHTVSYPARTRKVIVSVYITCFLTSIPYYWWPNIW
. :.:.::.. ::.::: :.::::.....: :.:::..:..: . .::.::.::: ..:
NP_001 ANHASVWIAILLTVDRYTALCHPLHHRAASSPGRTRRAIAAVLSAALLTGIPFYWWLDMW
160 170 180 190 200 210
180 190 200 210 220 230
pF1KE9 TEDYISTSVHHVLIWIHCFTVYLVPCSIFFILNSIIVYKLRRKSNFRLRGYSTGKTTAIL
. .. .:: : ::.:::..::..:.. :: :...:::.. :. .::.::::
NP_001 RDTDSPRTLDEVLKWAHCLTVYFIPCGVFLVTNSAIIHRLRRRGRSGLQPR-VGKSTAIL
220 230 240 250 260 270
240 250 260 270 280 290
pF1KE9 FTITSIFATLWAPRIIMILYHLYGAPIQNRWLVHIMSDIANMLALLNTAINFFLYCFISK
. ::..:. :::::....:::.: ::.. : ::. :.:::.:.:.:: :: ::::.::
NP_001 LGITTLFTLLWAPRVFVMLYHMYVAPVHRDWRVHLALDVANMVAMLHTAANFGLYCFVSK
280 290 300 310 320 330
300 310 320 330 340
pF1KE9 RFRTMAAATLK-AFFKCQ--KQPVQFYTNHNFSITSSPWISPANSHCIKMLVYQYDKNGK
::. . ... :.. : .::
NP_001 TFRATVRQVIHDAYLPCTLASQPEGMAAKPVMEPPGLPTGAEV
340 350 360 370
>>NP_861455 (OMIM: 609046) probable G-protein coupled re (462 aa)
initn: 938 init1: 646 opt: 968 Z-score: 858.7 bits: 167.8 E(85289): 4.3e-41
Smith-Waterman score: 968; 45.7% identity (77.8% similar) in 293 aa overlap (21-310:151-442)
10 20 30 40 50
pF1KE9 MEHTHAHLAANSSLSWWSPGSACGLGFVPVVYYSLLLCLGLPANILTVII
: : : .::.:::.:: ::::...::..
NP_861 GQPRVTLLPTPHVSGLSQEFESHWPEIAERSPCVAGVIPVIYYSVLLGLGLPVSLLTAVA
130 140 150 160 170 180
60 70 80 90 100 110
pF1KE9 LSQLVARRQKSSYNYLLALAAADILVLFFIVFVDFLLEDFILNMQMPQVPDKIIEVLEFS
:..:..: .. :: :::::.:.::.. :::. :::. .: :.::. . ..:::.
NP_861 LARLATRTRRPSYYYLLALTASDIIIQVVIVFAGFLLQGAVLARQVPQAVVRTANILEFA
190 200 210 220 230 240
120 130 140 150 160 170
pF1KE9 SIHTSIWITVPLTIDRYIAVCHPLKYHTVSYPARTRKVIVSVYITCFLTSIPYYWWPNIW
. :.:.::.. ::.::: :.::::.....: :.:::..:..: . .::.::.::: ..:
NP_861 ANHASVWIAILLTVDRYTALCHPLHHRAASSPGRTRRAIAAVLSAALLTGIPFYWWLDMW
250 260 270 280 290 300
180 190 200 210 220 230
pF1KE9 TEDYISTSVHHVLIWIHCFTVYLVPCSIFFILNSIIVYKLRRKSNFRLRGYSTGKTTAIL
. .. .:: : ::.:::..::..:.. :: :...:::.. :. .::.::::
NP_861 RDTDSPRTLDEVLKWAHCLTVYFIPCGVFLVTNSAIIHRLRRRGRSGLQPR-VGKSTAIL
310 320 330 340 350
240 250 260 270 280 290
pF1KE9 FTITSIFATLWAPRIIMILYHLYGAPIQNRWLVHIMSDIANMLALLNTAINFFLYCFISK
. ::..:. :::::....:::.: ::.. : ::. :.:::.:.:.:: :: ::::.::
NP_861 LGITTLFTLLWAPRVFVMLYHMYVAPVHRDWRVHLALDVANMVAMLHTAANFGLYCFVSK
360 370 380 390 400 410
300 310 320 330 340
pF1KE9 RFRTMAAATLK-AFFKCQ--KQPVQFYTNHNFSITSSPWISPANSHCIKMLVYQYDKNGK
::. . ... :.. : .::
NP_861 TFRATVRQVIHDAYLPCTLASQPEGMAAKPVMEPPGLPTGAEV
420 430 440 450 460
>>NP_847899 (OMIM: 601268) C-C chemokine receptor type 3 (355 aa)
initn: 138 init1: 58 opt: 272 Z-score: 256.4 bits: 56.0 E(85289): 1.5e-07
Smith-Waterman score: 273; 24.9% identity (56.0% similar) in 325 aa overlap (27-332:36-347)
10 20 30 40 50
pF1KE9 MEHTHAHLAANSSLSWWSPGSACGLGFVPVVYYSLLLCLGLPANILTVIILSQLVA
::: .: ::.. .:: .:...:.:: .
NP_847 DTVETFGTTSYYDDVGLLCEKADTRALMAQFVPPLY-SLVFTVGLLGNVVVVMILIKY--
10 20 30 40 50 60
60 70 80 90 100 110
pF1KE9 RRQKSSYN-YLLALAAADILVLFFIVF-VDFLL-EDFILNMQMPQVPDKIIEVLEFSSIH
:: . : ::: :: .:.: : . : . .. ...... : :.. . ....
NP_847 RRLRIMTNIYLLNLAISDLLFLVTLPFWIHYVRGHNWVFGHGMC----KLLSGFYHTGLY
70 80 90 100 110
120 130 140 150 160 170
pF1KE9 TSIWITVPLTIDRYIAVCHP---LKYHTVSYPARTRKVIVSVYITCFLTSIPYYWWPNIW
. :.. . ::::::.:. : :. .::.. . : : .. . : . .: ...
NP_847 SEIFFIILLTIDRYLAIVHAVFALRARTVTFGVITSIVTWGLAVLAALPEFIFYETEELF
120 130 140 150 160 170
180 190 200 210 220
pF1KE9 TEDYISTSVHH--VLIWIHCFTVYL-VPCSIFFILNSIIVYKLRRKSNFRLRGYSTGKTT
: :. . : : : :. . . : .. .: : : :. .: . . :.
NP_847 EETLCSALYPEDTVYSWRHFHTLRMTIFCLVLPLLVMAICYTGIIKTLLRCPSKKKYKAI
180 190 200 210 220 230
230 240 250 260 270 280
pF1KE9 AILFTITSIFATLWAPRIIMIL---YH--LYGAPIQNRWLVHIMSDIANMLALLNTAINF
..:.: ..: .:.: . :: :. :.: . . .. .....: . .:
NP_847 RLIFVIMAVFFIFWTPYNVAILLSSYQSILFGNDCERSKHLDLVMLVTEVIAYSHCCMNP
240 250 260 270 280 290
290 300 310 320 330
pF1KE9 FLYCFISKRFRTMAAATLKAFFKCQ-----KQPVQFYTNHNFSITSSPWISPANSHCIKM
.: :...::: . :. ::. . . . : .... ::: .::...
NP_847 VIYAFVGERFRKY----LRHFFHRHLLMHLGRYIPFLPSEKLERTSS--VSPSTAEPELS
300 310 320 330 340 350
340 350
pF1KE9 LVYQYDKNGKPIKVSP
NP_847 IVF
>>XP_006713023 (OMIM: 601268) PREDICTED: C-C chemokine r (355 aa)
initn: 138 init1: 58 opt: 272 Z-score: 256.4 bits: 56.0 E(85289): 1.5e-07
Smith-Waterman score: 273; 24.9% identity (56.0% similar) in 325 aa overlap (27-332:36-347)
10 20 30 40 50
pF1KE9 MEHTHAHLAANSSLSWWSPGSACGLGFVPVVYYSLLLCLGLPANILTVIILSQLVA
::: .: ::.. .:: .:...:.:: .
XP_006 DTVETFGTTSYYDDVGLLCEKADTRALMAQFVPPLY-SLVFTVGLLGNVVVVMILIKY--
10 20 30 40 50 60
60 70 80 90 100 110
pF1KE9 RRQKSSYN-YLLALAAADILVLFFIVF-VDFLL-EDFILNMQMPQVPDKIIEVLEFSSIH
:: . : ::: :: .:.: : . : . .. ...... : :.. . ....
XP_006 RRLRIMTNIYLLNLAISDLLFLVTLPFWIHYVRGHNWVFGHGMC----KLLSGFYHTGLY
70 80 90 100 110
120 130 140 150 160 170
pF1KE9 TSIWITVPLTIDRYIAVCHP---LKYHTVSYPARTRKVIVSVYITCFLTSIPYYWWPNIW
. :.. . ::::::.:. : :. .::.. . : : .. . : . .: ...
XP_006 SEIFFIILLTIDRYLAIVHAVFALRARTVTFGVITSIVTWGLAVLAALPEFIFYETEELF
120 130 140 150 160 170
180 190 200 210 220
pF1KE9 TEDYISTSVHH--VLIWIHCFTVYL-VPCSIFFILNSIIVYKLRRKSNFRLRGYSTGKTT
: :. . : : : :. . . : .. .: : : :. .: . . :.
XP_006 EETLCSALYPEDTVYSWRHFHTLRMTIFCLVLPLLVMAICYTGIIKTLLRCPSKKKYKAI
180 190 200 210 220 230
230 240 250 260 270 280
pF1KE9 AILFTITSIFATLWAPRIIMIL---YH--LYGAPIQNRWLVHIMSDIANMLALLNTAINF
..:.: ..: .:.: . :: :. :.: . . .. .....: . .:
XP_006 RLIFVIMAVFFIFWTPYNVAILLSSYQSILFGNDCERSKHLDLVMLVTEVIAYSHCCMNP
240 250 260 270 280 290
290 300 310 320 330
pF1KE9 FLYCFISKRFRTMAAATLKAFFKCQ-----KQPVQFYTNHNFSITSSPWISPANSHCIKM
.: :...::: . :. ::. . . . : .... ::: .::...
XP_006 VIYAFVGERFRKY----LRHFFHRHLLMHLGRYIPFLPSEKLERTSS--VSPSTAEPELS
300 310 320 330 340 350
340 350
pF1KE9 LVYQYDKNGKPIKVSP
XP_006 IVF
>>XP_011531637 (OMIM: 601268) PREDICTED: C-C chemokine r (355 aa)
initn: 138 init1: 58 opt: 272 Z-score: 256.4 bits: 56.0 E(85289): 1.5e-07
Smith-Waterman score: 273; 24.9% identity (56.0% similar) in 325 aa overlap (27-332:36-347)
10 20 30 40 50
pF1KE9 MEHTHAHLAANSSLSWWSPGSACGLGFVPVVYYSLLLCLGLPANILTVIILSQLVA
::: .: ::.. .:: .:...:.:: .
XP_011 DTVETFGTTSYYDDVGLLCEKADTRALMAQFVPPLY-SLVFTVGLLGNVVVVMILIKY--
10 20 30 40 50 60
60 70 80 90 100 110
pF1KE9 RRQKSSYN-YLLALAAADILVLFFIVF-VDFLL-EDFILNMQMPQVPDKIIEVLEFSSIH
:: . : ::: :: .:.: : . : . .. ...... : :.. . ....
XP_011 RRLRIMTNIYLLNLAISDLLFLVTLPFWIHYVRGHNWVFGHGMC----KLLSGFYHTGLY
70 80 90 100 110
120 130 140 150 160 170
pF1KE9 TSIWITVPLTIDRYIAVCHP---LKYHTVSYPARTRKVIVSVYITCFLTSIPYYWWPNIW
. :.. . ::::::.:. : :. .::.. . : : .. . : . .: ...
XP_011 SEIFFIILLTIDRYLAIVHAVFALRARTVTFGVITSIVTWGLAVLAALPEFIFYETEELF
120 130 140 150 160 170
180 190 200 210 220
pF1KE9 TEDYISTSVHH--VLIWIHCFTVYL-VPCSIFFILNSIIVYKLRRKSNFRLRGYSTGKTT
: :. . : : : :. . . : .. .: : : :. .: . . :.
XP_011 EETLCSALYPEDTVYSWRHFHTLRMTIFCLVLPLLVMAICYTGIIKTLLRCPSKKKYKAI
180 190 200 210 220 230
230 240 250 260 270 280
pF1KE9 AILFTITSIFATLWAPRIIMIL---YH--LYGAPIQNRWLVHIMSDIANMLALLNTAINF
..:.: ..: .:.: . :: :. :.: . . .. .....: . .:
XP_011 RLIFVIMAVFFIFWTPYNVAILLSSYQSILFGNDCERSKHLDLVMLVTEVIAYSHCCMNP
240 250 260 270 280 290
290 300 310 320 330
pF1KE9 FLYCFISKRFRTMAAATLKAFFKCQ-----KQPVQFYTNHNFSITSSPWISPANSHCIKM
.: :...::: . :. ::. . . . : .... ::: .::...
XP_011 VIYAFVGERFRKY----LRHFFHRHLLMHLGRYIPFLPSEKLERTSS--VSPSTAEPELS
300 310 320 330 340 350
340 350
pF1KE9 LVYQYDKNGKPIKVSP
XP_011 IVF
>>NP_001828 (OMIM: 601268) C-C chemokine receptor type 3 (355 aa)
initn: 138 init1: 58 opt: 272 Z-score: 256.4 bits: 56.0 E(85289): 1.5e-07
Smith-Waterman score: 273; 24.9% identity (56.0% similar) in 325 aa overlap (27-332:36-347)
10 20 30 40 50
pF1KE9 MEHTHAHLAANSSLSWWSPGSACGLGFVPVVYYSLLLCLGLPANILTVIILSQLVA
::: .: ::.. .:: .:...:.:: .
NP_001 DTVETFGTTSYYDDVGLLCEKADTRALMAQFVPPLY-SLVFTVGLLGNVVVVMILIKY--
10 20 30 40 50 60
60 70 80 90 100 110
pF1KE9 RRQKSSYN-YLLALAAADILVLFFIVF-VDFLL-EDFILNMQMPQVPDKIIEVLEFSSIH
:: . : ::: :: .:.: : . : . .. ...... : :.. . ....
NP_001 RRLRIMTNIYLLNLAISDLLFLVTLPFWIHYVRGHNWVFGHGMC----KLLSGFYHTGLY
70 80 90 100 110
120 130 140 150 160 170
pF1KE9 TSIWITVPLTIDRYIAVCHP---LKYHTVSYPARTRKVIVSVYITCFLTSIPYYWWPNIW
. :.. . ::::::.:. : :. .::.. . : : .. . : . .: ...
NP_001 SEIFFIILLTIDRYLAIVHAVFALRARTVTFGVITSIVTWGLAVLAALPEFIFYETEELF
120 130 140 150 160 170
180 190 200 210 220
pF1KE9 TEDYISTSVHH--VLIWIHCFTVYL-VPCSIFFILNSIIVYKLRRKSNFRLRGYSTGKTT
: :. . : : : :. . . : .. .: : : :. .: . . :.
NP_001 EETLCSALYPEDTVYSWRHFHTLRMTIFCLVLPLLVMAICYTGIIKTLLRCPSKKKYKAI
180 190 200 210 220 230
230 240 250 260 270 280
pF1KE9 AILFTITSIFATLWAPRIIMIL---YH--LYGAPIQNRWLVHIMSDIANMLALLNTAINF
..:.: ..: .:.: . :: :. :.: . . .. .....: . .:
NP_001 RLIFVIMAVFFIFWTPYNVAILLSSYQSILFGNDCERSKHLDLVMLVTEVIAYSHCCMNP
240 250 260 270 280 290
290 300 310 320 330
pF1KE9 FLYCFISKRFRTMAAATLKAFFKCQ-----KQPVQFYTNHNFSITSSPWISPANSHCIKM
.: :...::: . :. ::. . . . : .... ::: .::...
NP_001 VIYAFVGERFRKY----LRHFFHRHLLMHLGRYIPFLPSEKLERTSS--VSPSTAEPELS
300 310 320 330 340 350
340 350
pF1KE9 LVYQYDKNGKPIKVSP
NP_001 IVF
>>NP_001158152 (OMIM: 601268) C-C chemokine receptor typ (373 aa)
initn: 138 init1: 58 opt: 272 Z-score: 256.2 bits: 56.0 E(85289): 1.6e-07
Smith-Waterman score: 273; 24.9% identity (56.0% similar) in 325 aa overlap (27-332:54-365)
10 20 30 40 50
pF1KE9 MEHTHAHLAANSSLSWWSPGSACGLGFVPVVYYSLLLCLGLPANILTVIILSQLVA
::: .: ::.. .:: .:...:.:: .
NP_001 DTVETFGTTSYYDDVGLLCEKADTRALMAQFVPPLY-SLVFTVGLLGNVVVVMILIKY--
30 40 50 60 70 80
60 70 80 90 100 110
pF1KE9 RRQKSSYN-YLLALAAADILVLFFIVF-VDFLL-EDFILNMQMPQVPDKIIEVLEFSSIH
:: . : ::: :: .:.: : . : . .. ...... : :.. . ....
NP_001 RRLRIMTNIYLLNLAISDLLFLVTLPFWIHYVRGHNWVFGHGMC----KLLSGFYHTGLY
90 100 110 120 130
120 130 140 150 160 170
pF1KE9 TSIWITVPLTIDRYIAVCHP---LKYHTVSYPARTRKVIVSVYITCFLTSIPYYWWPNIW
. :.. . ::::::.:. : :. .::.. . : : .. . : . .: ...
NP_001 SEIFFIILLTIDRYLAIVHAVFALRARTVTFGVITSIVTWGLAVLAALPEFIFYETEELF
140 150 160 170 180 190
180 190 200 210 220
pF1KE9 TEDYISTSVHH--VLIWIHCFTVYL-VPCSIFFILNSIIVYKLRRKSNFRLRGYSTGKTT
: :. . : : : :. . . : .. .: : : :. .: . . :.
NP_001 EETLCSALYPEDTVYSWRHFHTLRMTIFCLVLPLLVMAICYTGIIKTLLRCPSKKKYKAI
200 210 220 230 240 250
230 240 250 260 270 280
pF1KE9 AILFTITSIFATLWAPRIIMIL---YH--LYGAPIQNRWLVHIMSDIANMLALLNTAINF
..:.: ..: .:.: . :: :. :.: . . .. .....: . .:
NP_001 RLIFVIMAVFFIFWTPYNVAILLSSYQSILFGNDCERSKHLDLVMLVTEVIAYSHCCMNP
260 270 280 290 300 310
290 300 310 320 330
pF1KE9 FLYCFISKRFRTMAAATLKAFFKCQ-----KQPVQFYTNHNFSITSSPWISPANSHCIKM
.: :...::: . :. ::. . . . : .... ::: .::...
NP_001 VIYAFVGERFRKY----LRHFFHRHLLMHLGRYIPFLPSEKLERTSS--VSPSTAEPELS
320 330 340 350 360 370
340 350
pF1KE9 LVYQYDKNGKPIKVSP
NP_001 IVF
>>NP_847898 (OMIM: 601268) C-C chemokine receptor type 3 (376 aa)
initn: 138 init1: 58 opt: 272 Z-score: 256.2 bits: 56.0 E(85289): 1.6e-07
Smith-Waterman score: 273; 24.9% identity (56.0% similar) in 325 aa overlap (27-332:57-368)
10 20 30 40 50
pF1KE9 MEHTHAHLAANSSLSWWSPGSACGLGFVPVVYYSLLLCLGLPANILTVIILSQLVA
::: .: ::.. .:: .:...:.:: .
NP_847 DTVETFGTTSYYDDVGLLCEKADTRALMAQFVPPLY-SLVFTVGLLGNVVVVMILIKY--
30 40 50 60 70 80
60 70 80 90 100 110
pF1KE9 RRQKSSYN-YLLALAAADILVLFFIVF-VDFLL-EDFILNMQMPQVPDKIIEVLEFSSIH
:: . : ::: :: .:.: : . : . .. ...... : :.. . ....
NP_847 RRLRIMTNIYLLNLAISDLLFLVTLPFWIHYVRGHNWVFGHGMC----KLLSGFYHTGLY
90 100 110 120 130
120 130 140 150 160 170
pF1KE9 TSIWITVPLTIDRYIAVCHP---LKYHTVSYPARTRKVIVSVYITCFLTSIPYYWWPNIW
. :.. . ::::::.:. : :. .::.. . : : .. . : . .: ...
NP_847 SEIFFIILLTIDRYLAIVHAVFALRARTVTFGVITSIVTWGLAVLAALPEFIFYETEELF
140 150 160 170 180 190
180 190 200 210 220
pF1KE9 TEDYISTSVHH--VLIWIHCFTVYL-VPCSIFFILNSIIVYKLRRKSNFRLRGYSTGKTT
: :. . : : : :. . . : .. .: : : :. .: . . :.
NP_847 EETLCSALYPEDTVYSWRHFHTLRMTIFCLVLPLLVMAICYTGIIKTLLRCPSKKKYKAI
200 210 220 230 240 250
230 240 250 260 270 280
pF1KE9 AILFTITSIFATLWAPRIIMIL---YH--LYGAPIQNRWLVHIMSDIANMLALLNTAINF
..:.: ..: .:.: . :: :. :.: . . .. .....: . .:
NP_847 RLIFVIMAVFFIFWTPYNVAILLSSYQSILFGNDCERSKHLDLVMLVTEVIAYSHCCMNP
260 270 280 290 300 310
290 300 310 320 330
pF1KE9 FLYCFISKRFRTMAAATLKAFFKCQ-----KQPVQFYTNHNFSITSSPWISPANSHCIKM
.: :...::: . :. ::. . . . : .... ::: .::...
NP_847 VIYAFVGERFRKY----LRHFFHRHLLMHLGRYIPFLPSEKLERTSS--VSPSTAEPELS
320 330 340 350 360 370
340 350
pF1KE9 LVYQYDKNGKPIKVSP
NP_847 IVF
>>XP_016861175 (OMIM: 601268) PREDICTED: C-C chemokine r (410 aa)
initn: 138 init1: 58 opt: 272 Z-score: 255.8 bits: 56.1 E(85289): 1.6e-07
Smith-Waterman score: 273; 24.9% identity (56.0% similar) in 325 aa overlap (27-332:91-402)
10 20 30 40 50
pF1KE9 MEHTHAHLAANSSLSWWSPGSACGLGFVPVVYYSLLLCLGLPANILTVIILSQLVA
::: .: ::.. .:: .:...:.:: .
XP_016 DTVETFGTTSYYDDVGLLCEKADTRALMAQFVPPLY-SLVFTVGLLGNVVVVMILIKY--
70 80 90 100 110
60 70 80 90 100 110
pF1KE9 RRQKSSYN-YLLALAAADILVLFFIVF-VDFLL-EDFILNMQMPQVPDKIIEVLEFSSIH
:: . : ::: :: .:.: : . : . .. ...... : :.. . ....
XP_016 RRLRIMTNIYLLNLAISDLLFLVTLPFWIHYVRGHNWVFGHGMC----KLLSGFYHTGLY
120 130 140 150 160 170
120 130 140 150 160 170
pF1KE9 TSIWITVPLTIDRYIAVCHP---LKYHTVSYPARTRKVIVSVYITCFLTSIPYYWWPNIW
. :.. . ::::::.:. : :. .::.. . : : .. . : . .: ...
XP_016 SEIFFIILLTIDRYLAIVHAVFALRARTVTFGVITSIVTWGLAVLAALPEFIFYETEELF
180 190 200 210 220 230
180 190 200 210 220
pF1KE9 TEDYISTSVHH--VLIWIHCFTVYL-VPCSIFFILNSIIVYKLRRKSNFRLRGYSTGKTT
: :. . : : : :. . . : .. .: : : :. .: . . :.
XP_016 EETLCSALYPEDTVYSWRHFHTLRMTIFCLVLPLLVMAICYTGIIKTLLRCPSKKKYKAI
240 250 260 270 280 290
230 240 250 260 270 280
pF1KE9 AILFTITSIFATLWAPRIIMIL---YH--LYGAPIQNRWLVHIMSDIANMLALLNTAINF
..:.: ..: .:.: . :: :. :.: . . .. .....: . .:
XP_016 RLIFVIMAVFFIFWTPYNVAILLSSYQSILFGNDCERSKHLDLVMLVTEVIAYSHCCMNP
300 310 320 330 340 350
290 300 310 320 330
pF1KE9 FLYCFISKRFRTMAAATLKAFFKCQ-----KQPVQFYTNHNFSITSSPWISPANSHCIKM
.: :...::: . :. ::. . . . : .... ::: .::...
XP_016 VIYAFVGERFRKY----LRHFFHRHLLMHLGRYIPFLPSEKLERTSS--VSPSTAEPELS
360 370 380 390 400
340 350
pF1KE9 LVYQYDKNGKPIKVSP
XP_016 IVF
410
353 residues in 1 query sequences
60827320 residues in 85289 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Sun Nov 6 12:19:42 2016 done: Sun Nov 6 12:19:43 2016
Total Scan time: 7.080 Total Display time: 0.040
Function used was FASTA [36.3.4 Apr, 2011]