Result of FASTA (omim) for
pFN21AE9416
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KE9416, 540 aa
1>>>pF1KE9416 540 - 540 aa - 540 aa
Library: /omim/omim.rfq.tfa
60827320 residues in 85289 sequences
Statistics: Expectation_n fit: rho(ln(x))= 5.5918+/-0.000431; mu= 17.5118+/- 0.027
mean_var=85.2017+/-17.909, 0's: 0 Z-trim(112.1): 90 B-trim: 2472 in 2/49
Lambda= 0.138947
statistics sampled from 20762 (20859) to 20762 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.613), E-opt: 0.2 (0.245), width: 16
Scan time: 8.600
The best scores are: opt bits E(85289)
NP_006785 (OMIM: 606704) probable G-protein couple ( 540) 3582 728.5 1.2e-209
NP_036284 (OMIM: 605106) lysophosphatidic acid rec ( 353) 157 41.8 0.0043
NP_848540 (OMIM: 606065) atypical chemokine recept ( 350) 156 41.6 0.0049
NP_057641 (OMIM: 606065) atypical chemokine recept ( 350) 156 41.6 0.0049
NP_001328 (OMIM: 601470,607339,609423,613784) CX3C ( 355) 156 41.6 0.0049
NP_001164643 (OMIM: 601470,607339,609423,613784) C ( 355) 156 41.6 0.0049
NP_001164642 (OMIM: 601470,607339,609423,613784) C ( 355) 156 41.6 0.0049
NP_001164645 (OMIM: 601470,607339,609423,613784) C ( 387) 156 41.6 0.0053
NP_004239 (OMIM: 600895) prolactin-releasing pepti ( 370) 155 41.4 0.0059
NP_065103 (OMIM: 606383) G-protein coupled recepto ( 396) 152 40.8 0.0094
XP_011536797 (OMIM: 606383) PREDICTED: G-protein c ( 396) 152 40.8 0.0094
>>NP_006785 (OMIM: 606704) probable G-protein coupled re (540 aa)
initn: 3582 init1: 3582 opt: 3582 Z-score: 3884.5 bits: 728.5 E(85289): 1.2e-209
Smith-Waterman score: 3582; 100.0% identity (100.0% similar) in 540 aa overlap (1-540:1-540)
10 20 30 40 50 60
pF1KE9 MNSTGHLQDAPNATSLHVPHSQEGNSTSLQEGLQDLIHTATLVTCTFLLAVIFCLGSYGN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_006 MNSTGHLQDAPNATSLHVPHSQEGNSTSLQEGLQDLIHTATLVTCTFLLAVIFCLGSYGN
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE9 FIVFLSFFDPAFRKFRTNFDFMILNLSFCDLFICGVTAPMFTFVLFFSSASSIPDAFCFT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_006 FIVFLSFFDPAFRKFRTNFDFMILNLSFCDLFICGVTAPMFTFVLFFSSASSIPDAFCFT
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE9 FHLTSSGFIIMSLKTVAVIALHRLRMVLGKQPNRTASFPCTVLLTLLLWATSFTLATLAT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_006 FHLTSSGFIIMSLKTVAVIALHRLRMVLGKQPNRTASFPCTVLLTLLLWATSFTLATLAT
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE9 LKTSKSHLCLPMSSLIAGKGKAILSLYVVDFTFCVAVVSVSYIMIAQTLRKNAQVRKCPP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_006 LKTSKSHLCLPMSSLIAGKGKAILSLYVVDFTFCVAVVSVSYIMIAQTLRKNAQVRKCPP
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE9 VITVDASRPQPFMGVPVQGGGDPIQCAMPALYRNQNYNKLQHVQTRGYTKSPNQLVTPAA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_006 VITVDASRPQPFMGVPVQGGGDPIQCAMPALYRNQNYNKLQHVQTRGYTKSPNQLVTPAA
250 260 270 280 290 300
310 320 330 340 350 360
pF1KE9 SRLQLVSAINLSTAKDSKAVVTCVIIVLSVLVCCLPLGISLVQVVLSSNGSFILYQFELF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_006 SRLQLVSAINLSTAKDSKAVVTCVIIVLSVLVCCLPLGISLVQVVLSSNGSFILYQFELF
310 320 330 340 350 360
370 380 390 400 410 420
pF1KE9 GFTLIFFKSGLNPFIYSRNSAGLRRKVLWCLQYIGLGFFCCKQKTRLRAMGKGNLEVNRN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_006 GFTLIFFKSGLNPFIYSRNSAGLRRKVLWCLQYIGLGFFCCKQKTRLRAMGKGNLEVNRN
370 380 390 400 410 420
430 440 450 460 470 480
pF1KE9 KSSHHETNSAYMLSPKPQKKFVDQACGPSHSKESMVSPKISAGHQHCGQSSSTPINTRIE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_006 KSSHHETNSAYMLSPKPQKKFVDQACGPSHSKESMVSPKISAGHQHCGQSSSTPINTRIE
430 440 450 460 470 480
490 500 510 520 530 540
pF1KE9 PYYSIYNSSPSQEESSPCNLQPVNSFGFANSYIAMHYHTTNDLVQEYDSTSAKQIPVPSV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_006 PYYSIYNSSPSQEESSPCNLQPVNSFGFANSYIAMHYHTTNDLVQEYDSTSAKQIPVPSV
490 500 510 520 530 540
>>NP_036284 (OMIM: 605106) lysophosphatidic acid recepto (353 aa)
initn: 136 init1: 66 opt: 157 Z-score: 176.6 bits: 41.8 E(85289): 0.0043
Smith-Waterman score: 157; 23.0% identity (55.7% similar) in 235 aa overlap (49-271:30-256)
20 30 40 50 60 70
pF1KE9 PHSQEGNSTSLQEGLQDLIHTATLVTCTFLLAVIFCLGSYGNFIVFLS--FFDPAF---R
:....:.:.. ...:.: . : :
NP_036 MNECHYDKHMDFFYNRSNTDTVDDWTGTKLVIVLCVGTFFCLFIFFSNSLVIAAVIKNR
10 20 30 40 50
80 90 100 110 120
pF1KE9 KFRTNFDFMILNLSFCDLFICGVTAPMFTFVLF----FSSASSIPDAFCFTFHLTSSGFI
::. : ... ::. :.: :.. ..:..: :.. .. : : :: .
NP_036 KFHFPFYYLLANLAAADFFA-GIA---YVFLMFNTGPVSKTLTVNRWFLRQGLLDSS--L
60 70 80 90 100 110
130 140 150 160 170 180
pF1KE9 IMSLKTVAVIALHRLRMVLGKQPNRTASFPCTVLLTLLLWATSFTLATLATLKTSKSHLC
:: .. :::..: .. . . . . ..:: ::.:: .. .... :: . . ::
NP_036 TASLTNLLVIAVERHMSIMRMRVHSNLTKKRVTLLILLVWAIAIFMGAVPTL--GWNCLC
120 130 140 150 160 170
190 200 210 220 230 240
pF1KE9 --LPMSSLIAGKGKAILSLYVVDFTFCVAVVSVSYIMIAQTLRKNAQVRKCPPVITVDAS
::: ... : ...:. . .. : :. : ......: . ...
NP_036 NISACSSLAPIYSRSYLVFWTVSNLMAFLIMVVVYLRIYVYVKRKTNVLSPHTSGSISRR
180 190 200 210 220 230
250 260 270 280 290 300
pF1KE9 R-PQPFMGVPVQGGGDPIQCAMPALYRNQNYNKLQHVQTRGYTKSPNQLVTPAASRLQLV
: :. .: . . : . : :.:
NP_036 RTPMKLMKTVMTVLGAFVVCWTPGLVVLLLDGLNCRQCGVQHVKRWFLLLALLNSVVNPI
240 250 260 270 280 290
>>NP_848540 (OMIM: 606065) atypical chemokine receptor 4 (350 aa)
initn: 84 init1: 54 opt: 156 Z-score: 175.5 bits: 41.6 E(85289): 0.0049
Smith-Waterman score: 156; 23.0% identity (57.4% similar) in 204 aa overlap (48-241:47-239)
20 30 40 50 60 70
pF1KE9 VPHSQEGNSTSLQEGLQDLIHTATLVTCTFLLAVIFCLGSYGNFIVFLSFFDPAFRKFRT
.:...: .: :: .: . ..: ::
NP_848 EMNGTYDYSQYELICIKEDVREFAKVFLPVFLTIVFVIGLAGNSMVVAIY--AYYKKQRT
20 30 40 50 60 70
80 90 100 110 120 130
pF1KE9 NFDFMILNLSFCDLFICGVTAPMFTFVLFFSSASS---IPDAFC-FTFHLTSSGFIIMSL
. : .::::. ::.. .::. .. .: . .: .: : . .:. ..
NP_848 KTDVYILNLAVADLLL------LFTLPFWAVNAVHGWVLGKIMCKITSALYTLNFV-SGM
80 90 100 110 120
140 150 160 170 180 190
pF1KE9 KTVAVIALHRLRMVLGKQPNRTA-SFPCTVLLTLLLWATSFTLAT--LATLKTSKSHLCL
. .: :.. : ... : :.... . :: .. . .: ... :. :. .. . :.
NP_848 QFLACISIDRY-VAVTKVPSQSGVGKPCWII-CFCVWMAAILLSIPQLVFYTVNDNARCI
130 140 150 160 170 180
200 210 220 230 240
pF1KE9 PMSSLIAGKG-KAILSLYVVDFTFCVA--VVSVSYIMIAQTLRKNAQVRKCPPVITVDAS
:. : . ::.... . . : : ...: :.. :.:: : ... :.
NP_848 PIFPRYLGTSMKALIQMLEICIGFVVPFLIMGVCYFITARTLMKMPNIKISRPLKVLLTV
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE9 RPQPFMGVPVQGGGDPIQCAMPALYRNQNYNKLQHVQTRGYTKSPNQLVTPAASRLQLVS
NP_848 VIVFIVTQLPYNIVKFCRAIDIIYSLITSCNMSKRMDIAIQVTESIALFHSCLNPILYVF
250 260 270 280 290 300
>>NP_057641 (OMIM: 606065) atypical chemokine receptor 4 (350 aa)
initn: 84 init1: 54 opt: 156 Z-score: 175.5 bits: 41.6 E(85289): 0.0049
Smith-Waterman score: 156; 23.0% identity (57.4% similar) in 204 aa overlap (48-241:47-239)
20 30 40 50 60 70
pF1KE9 VPHSQEGNSTSLQEGLQDLIHTATLVTCTFLLAVIFCLGSYGNFIVFLSFFDPAFRKFRT
.:...: .: :: .: . ..: ::
NP_057 EMNGTYDYSQYELICIKEDVREFAKVFLPVFLTIVFVIGLAGNSMVVAIY--AYYKKQRT
20 30 40 50 60 70
80 90 100 110 120 130
pF1KE9 NFDFMILNLSFCDLFICGVTAPMFTFVLFFSSASS---IPDAFC-FTFHLTSSGFIIMSL
. : .::::. ::.. .::. .. .: . .: .: : . .:. ..
NP_057 KTDVYILNLAVADLLL------LFTLPFWAVNAVHGWVLGKIMCKITSALYTLNFV-SGM
80 90 100 110 120
140 150 160 170 180 190
pF1KE9 KTVAVIALHRLRMVLGKQPNRTA-SFPCTVLLTLLLWATSFTLAT--LATLKTSKSHLCL
. .: :.. : ... : :.... . :: .. . .: ... :. :. .. . :.
NP_057 QFLACISIDRY-VAVTKVPSQSGVGKPCWII-CFCVWMAAILLSIPQLVFYTVNDNARCI
130 140 150 160 170 180
200 210 220 230 240
pF1KE9 PMSSLIAGKG-KAILSLYVVDFTFCVA--VVSVSYIMIAQTLRKNAQVRKCPPVITVDAS
:. : . ::.... . . : : ...: :.. :.:: : ... :.
NP_057 PIFPRYLGTSMKALIQMLEICIGFVVPFLIMGVCYFITARTLMKMPNIKISRPLKVLLTV
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE9 RPQPFMGVPVQGGGDPIQCAMPALYRNQNYNKLQHVQTRGYTKSPNQLVTPAASRLQLVS
NP_057 VIVFIVTQLPYNIVKFCRAIDIIYSLITSCNMSKRMDIAIQVTESIALFHSCLNPILYVF
250 260 270 280 290 300
>>NP_001328 (OMIM: 601470,607339,609423,613784) CX3C che (355 aa)
initn: 118 init1: 62 opt: 156 Z-score: 175.4 bits: 41.6 E(85289): 0.0049
Smith-Waterman score: 156; 25.4% identity (57.2% similar) in 201 aa overlap (35-229:25-218)
10 20 30 40 50 60
pF1KE9 GHLQDAPNATSLHVPHSQEGNSTSLQEGLQDLIHTATLVTCTFLLAVIFCLGSYGNFIVF
:.. .:. : .::: .: ::..:
NP_001 MDQFPESVTENFEYDDLAEACYIGDIVVFGTVFLSIFY-SVIFAIGLVGNLLVV
10 20 30 40 50
70 80 90 100 110 120
pF1KE9 LSFFDPAFRKFRTNFDFMILNLSFCDLFICGVTAPMFTFVLFFSSASSIPDAFC-FTFHL
... . .: .. :...:::.. ::.. . : :..: :. . ... .:.: :: .
NP_001 FALTNS--KKPKSVTDIYLLNLALSDLLFVA-TLPFWTHYLI--NEKGLHNAMCKFTTAF
60 70 80 90 100
130 140 150 160 170 180
pF1KE9 TSSGFIIMSLKTVAVIALHR-LRMVLGKQPNRTASFPCTVLLTLLLWATSFTLATLATLK
::. :. ..::.. : : .::. . . . : ..: .::... .:. .
NP_001 FFIGFF-GSIFFITVISIDRYLAIVLAANSMNNRTVQHGVTISLGVWAAAILVAAPQFMF
110 120 130 140 150 160
190 200 210 220 230
pF1KE9 TS-KSHLCLPMSSLIAGKGKAILS---LYVVDFTFCVAVVSVSYIMIAQTLRKNAQVRKC
:. : . :: . . .: . : . . ..: :. : :::
NP_001 TKQKENECLGDYPEVLQEIWPVLRNVETNFLGFLLPLLIMSYCYFRIIQTLFSCKNHKKA
170 180 190 200 210 220
240 250 260 270 280 290
pF1KE9 PPVITVDASRPQPFMGVPVQGGGDPIQCAMPALYRNQNYNKLQHVQTRGYTKSPNQLVTP
NP_001 KAIKLILLVVIVFFLFWTPYNVMIFLETLKLYDFFPSCDMRKDLRLALSVTETVAFSHCC
230 240 250 260 270 280
>>NP_001164643 (OMIM: 601470,607339,609423,613784) CX3C (355 aa)
initn: 118 init1: 62 opt: 156 Z-score: 175.4 bits: 41.6 E(85289): 0.0049
Smith-Waterman score: 156; 25.4% identity (57.2% similar) in 201 aa overlap (35-229:25-218)
10 20 30 40 50 60
pF1KE9 GHLQDAPNATSLHVPHSQEGNSTSLQEGLQDLIHTATLVTCTFLLAVIFCLGSYGNFIVF
:.. .:. : .::: .: ::..:
NP_001 MDQFPESVTENFEYDDLAEACYIGDIVVFGTVFLSIFY-SVIFAIGLVGNLLVV
10 20 30 40 50
70 80 90 100 110 120
pF1KE9 LSFFDPAFRKFRTNFDFMILNLSFCDLFICGVTAPMFTFVLFFSSASSIPDAFC-FTFHL
... . .: .. :...:::.. ::.. . : :..: :. . ... .:.: :: .
NP_001 FALTNS--KKPKSVTDIYLLNLALSDLLFVA-TLPFWTHYLI--NEKGLHNAMCKFTTAF
60 70 80 90 100
130 140 150 160 170 180
pF1KE9 TSSGFIIMSLKTVAVIALHR-LRMVLGKQPNRTASFPCTVLLTLLLWATSFTLATLATLK
::. :. ..::.. : : .::. . . . : ..: .::... .:. .
NP_001 FFIGFF-GSIFFITVISIDRYLAIVLAANSMNNRTVQHGVTISLGVWAAAILVAAPQFMF
110 120 130 140 150 160
190 200 210 220 230
pF1KE9 TS-KSHLCLPMSSLIAGKGKAILS---LYVVDFTFCVAVVSVSYIMIAQTLRKNAQVRKC
:. : . :: . . .: . : . . ..: :. : :::
NP_001 TKQKENECLGDYPEVLQEIWPVLRNVETNFLGFLLPLLIMSYCYFRIIQTLFSCKNHKKA
170 180 190 200 210 220
240 250 260 270 280 290
pF1KE9 PPVITVDASRPQPFMGVPVQGGGDPIQCAMPALYRNQNYNKLQHVQTRGYTKSPNQLVTP
NP_001 KAIKLILLVVIVFFLFWTPYNVMIFLETLKLYDFFPSCDMRKDLRLALSVTETVAFSHCC
230 240 250 260 270 280
>>NP_001164642 (OMIM: 601470,607339,609423,613784) CX3C (355 aa)
initn: 118 init1: 62 opt: 156 Z-score: 175.4 bits: 41.6 E(85289): 0.0049
Smith-Waterman score: 156; 25.4% identity (57.2% similar) in 201 aa overlap (35-229:25-218)
10 20 30 40 50 60
pF1KE9 GHLQDAPNATSLHVPHSQEGNSTSLQEGLQDLIHTATLVTCTFLLAVIFCLGSYGNFIVF
:.. .:. : .::: .: ::..:
NP_001 MDQFPESVTENFEYDDLAEACYIGDIVVFGTVFLSIFY-SVIFAIGLVGNLLVV
10 20 30 40 50
70 80 90 100 110 120
pF1KE9 LSFFDPAFRKFRTNFDFMILNLSFCDLFICGVTAPMFTFVLFFSSASSIPDAFC-FTFHL
... . .: .. :...:::.. ::.. . : :..: :. . ... .:.: :: .
NP_001 FALTNS--KKPKSVTDIYLLNLALSDLLFVA-TLPFWTHYLI--NEKGLHNAMCKFTTAF
60 70 80 90 100
130 140 150 160 170 180
pF1KE9 TSSGFIIMSLKTVAVIALHR-LRMVLGKQPNRTASFPCTVLLTLLLWATSFTLATLATLK
::. :. ..::.. : : .::. . . . : ..: .::... .:. .
NP_001 FFIGFF-GSIFFITVISIDRYLAIVLAANSMNNRTVQHGVTISLGVWAAAILVAAPQFMF
110 120 130 140 150 160
190 200 210 220 230
pF1KE9 TS-KSHLCLPMSSLIAGKGKAILS---LYVVDFTFCVAVVSVSYIMIAQTLRKNAQVRKC
:. : . :: . . .: . : . . ..: :. : :::
NP_001 TKQKENECLGDYPEVLQEIWPVLRNVETNFLGFLLPLLIMSYCYFRIIQTLFSCKNHKKA
170 180 190 200 210 220
240 250 260 270 280 290
pF1KE9 PPVITVDASRPQPFMGVPVQGGGDPIQCAMPALYRNQNYNKLQHVQTRGYTKSPNQLVTP
NP_001 KAIKLILLVVIVFFLFWTPYNVMIFLETLKLYDFFPSCDMRKDLRLALSVTETVAFSHCC
230 240 250 260 270 280
>>NP_001164645 (OMIM: 601470,607339,609423,613784) CX3C (387 aa)
initn: 118 init1: 62 opt: 156 Z-score: 174.9 bits: 41.6 E(85289): 0.0053
Smith-Waterman score: 156; 25.4% identity (57.2% similar) in 201 aa overlap (35-229:57-250)
10 20 30 40 50 60
pF1KE9 GHLQDAPNATSLHVPHSQEGNSTSLQEGLQDLIHTATLVTCTFLLAVIFCLGSYGNFIVF
:.. .:. : .::: .: ::..:
NP_001 ASGAFTMDQFPESVTENFEYDDLAEACYIGDIVVFGTVFLSIFY-SVIFAIGLVGNLLVV
30 40 50 60 70 80
70 80 90 100 110 120
pF1KE9 LSFFDPAFRKFRTNFDFMILNLSFCDLFICGVTAPMFTFVLFFSSASSIPDAFC-FTFHL
... . .: .. :...:::.. ::.. . : :..: :. . ... .:.: :: .
NP_001 FALTNS--KKPKSVTDIYLLNLALSDLLFVA-TLPFWTHYLI--NEKGLHNAMCKFTTAF
90 100 110 120 130 140
130 140 150 160 170 180
pF1KE9 TSSGFIIMSLKTVAVIALHR-LRMVLGKQPNRTASFPCTVLLTLLLWATSFTLATLATLK
::. :. ..::.. : : .::. . . . : ..: .::... .:. .
NP_001 FFIGFF-GSIFFITVISIDRYLAIVLAANSMNNRTVQHGVTISLGVWAAAILVAAPQFMF
150 160 170 180 190
190 200 210 220 230
pF1KE9 TS-KSHLCLPMSSLIAGKGKAILS---LYVVDFTFCVAVVSVSYIMIAQTLRKNAQVRKC
:. : . :: . . .: . : . . ..: :. : :::
NP_001 TKQKENECLGDYPEVLQEIWPVLRNVETNFLGFLLPLLIMSYCYFRIIQTLFSCKNHKKA
200 210 220 230 240 250
240 250 260 270 280 290
pF1KE9 PPVITVDASRPQPFMGVPVQGGGDPIQCAMPALYRNQNYNKLQHVQTRGYTKSPNQLVTP
NP_001 KAIKLILLVVIVFFLFWTPYNVMIFLETLKLYDFFPSCDMRKDLRLALSVTETVAFSHCC
260 270 280 290 300 310
>>NP_004239 (OMIM: 600895) prolactin-releasing peptide r (370 aa)
initn: 91 init1: 42 opt: 155 Z-score: 174.1 bits: 41.4 E(85289): 0.0059
Smith-Waterman score: 155; 23.9% identity (52.7% similar) in 226 aa overlap (31-248:51-270)
10 20 30 40 50 60
pF1KE9 MNSTGHLQDAPNATSLHVPHSQEGNSTSLQEGLQDLIHTATLVTCTFLLAVIFCLGSYGN
..:: :.: . ..: .:. .: ::
NP_004 AVTTPANQSAEASAGNGSVAGADAPAVTPFQSLQ-LVHQLKGLI-VLLYSVVVVVGLVGN
30 40 50 60 70
70 80 90 100 110 120
pF1KE9 FIVFLSFFDPAFRKFRTNFDFMILNLSFCDLFICGVTAPMFTFVLFFSSASSIPDAFCFT
.. : . :.... .:.: ::.. :...: . .:. : . . ..:
NP_004 CLLVLVI--ARVRRLHNVTNFLIGNLALSDVLMCTACVPLTLAYAFEPRGWVFGGGLCHL
80 90 100 110 120 130
130 140 150 160 170 180
pF1KE9 FHLTSSGFIIMSLKTVAVIALHRLRMVLGKQPNRTASFPCTVLLTLLLWATSFTLATLAT
. . . .:. :...::. : .:: . : :. .. .: .:: : .:: :.
NP_004 VFFLQPVTVYVSVFTLTTIAVDRY-VVLVHPLRRRISLRLSAYAVLAIWALSAVLALPAA
140 150 160 170 180 190
190 200 210 220 230
pF1KE9 LKTS----KSH---LCLPM-SSLIAGKGKAILSLYVVDFTFCVAVVSVSYIMIAQTLRKN
..: : : :: . .: . .: .: . . . :. .::. .. :: :
NP_004 VHTYHVELKPHDVRLCEEFWGSQERQRQLYAWGLLLVTYLLPLLVILLSYVRVSVKLR-N
200 210 220 230 240 250
240 250 260 270 280 290
pF1KE9 AQVRKCPPVITVDASRPQPFMGVPVQGGGDPIQCAMPALYRNQNYNKLQHVQTRGYTKSP
: : .: .:
NP_004 RVVPGCVTQSQADWDRARRRRTFCLLVVVVVVFAVCWLPLHVFNLLRDLDPHAIDPYAFG
260 270 280 290 300 310
>>NP_065103 (OMIM: 606383) G-protein coupled receptor 84 (396 aa)
initn: 108 init1: 75 opt: 152 Z-score: 170.4 bits: 40.8 E(85289): 0.0094
Smith-Waterman score: 156; 19.2% identity (51.7% similar) in 360 aa overlap (51-385:29-379)
30 40 50 60 70
pF1KE9 SQEGNSTSLQEGLQDLIHTATLVTCTFLLAVIFCLGSYGNFIVFLSF-FDPAFRKFRTNF
:. :. :: ...:.. ..: :.:: :
NP_065 MWNSSDANFSCYHESVLGYRYVAVSWGVVVAVTGTVGNVLTLLALAIQP---KLRTRF
10 20 30 40 50
80 90 100 110 120 130
pF1KE9 DFMILNLSFCDLFICGVTAPMFTFVLFFSSASSIPDAFCFTFHLTSSGFIIMSLKTVAVI
...: ::.. ::. : . : :. .. .:: .: : . .:. :. .:
NP_065 NLLIANLTLADLLYCTLLQP-FSVDTYLHLHWRTGATFCRVFGLLLFASNSVSILTLCLI
60 70 80 90 100 110
140 150 160 170 180 190
pF1KE9 ALHRLRMVLG-KQPNRTASFPCTVLLTLLLWATSF-TLATLATLKTSKSHLCLPMSSLIA
:: : .. : .. : :: . :... ..: : . .: . :
NP_065 ALGRYLLIAHPKLFPQVFSAKGIVLALVSTWVVGVASFAPLWPIYILVPVVCTCSFDRIR
120 130 140 150 160 170
200 210 220 230 240
pF1KE9 GKGKAILSLYVVDFTFCVAVVSVSYIMIAQTLRKNAQ------VRKCP----PVITVDAS
:. . . :. . :.. .. :.. : .: . ... :: .:. : .: .
NP_065 GRPYTTI-LMGIYFVLGLSSVGIFYCLIHRQVKRAAQALDQYKLRQASIHSNHVARTDEA
180 190 200 210 220 230
250 260 270 280 290
pF1KE9 RPQPFM--------GVPVQG-GGDPIQCAMPALYRNQNYNKLQHVQTRGYTKSPNQLVTP
: :. : : .: ...:.. : .... . ...... . ..
NP_065 MPGRFQELDSRLASGGPSEGISSEPVSAATTQTLEGDSSEVGDQINSKRAKQMAEKSPPE
240 250 260 270 280 290
300 310 320 330 340 350
pF1KE9 AASRLQLVSAINL---STAKDSKAVVTCVIIVLSVLVCCLPLGISLVQVVLSSNGSFILY
:... : ... :... .:.. : . : . .:. :. .:.. .
NP_065 ASAKAQPIKGARRAPDSSSEFGKVTRMCFAVFLCFALSYIPF---LLLNILDARVQ-APR
300 310 320 330 340
360 370 380 390 400 410
pF1KE9 QFELFGFTLIFFKSGLNPFIYSRNSAGLRRKVLWCLQYIGLGFFCCKQKTRLRAMGKGNL
.... .: .... .:: .:. . .:.
NP_065 VVHMLAANLTWLNGCINPVLYAAMNRQFRQAYGSILKRGPRSFHRLH
350 360 370 380 390
540 residues in 1 query sequences
60827320 residues in 85289 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Sun Nov 6 18:28:52 2016 done: Sun Nov 6 18:28:53 2016
Total Scan time: 8.600 Total Display time: 0.010
Function used was FASTA [36.3.4 Apr, 2011]