Result of FASTA (ccds) for
pFN21AE9415
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KE9415, 362 aa
1>>>pF1KE9415 362 - 362 aa - 362 aa
Library: human.CCDS.faa
18511270 residues in 32554 sequences
Statistics: Expectation_n fit: rho(ln(x))= 6.7103+/-0.000868; mu= 11.0496+/- 0.052
mean_var=187.5631+/-65.188, 0's: 0 Z-trim(110.8): 145 B-trim: 1448 in 2/49
Lambda= 0.093648
statistics sampled from 11615 (11869) to 11615 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.689), E-opt: 0.2 (0.365), width: 16
Scan time: 3.050
The best scores are: opt bits E(32554)
CCDS5079.1 GPR6 gene_id:2830|Hs108|chr6 ( 362) 2363 331.7 6e-91
CCDS69172.1 GPR6 gene_id:2830|Hs108|chr6 ( 377) 2363 331.7 6.1e-91
CCDS303.1 GPR3 gene_id:2827|Hs108|chr1 ( 330) 1294 187.2 1.7e-47
CCDS9319.1 GPR12 gene_id:2835|Hs108|chr13 ( 334) 1261 182.8 3.7e-46
CCDS12407.1 LPAR2 gene_id:9170|Hs108|chr19 ( 351) 457 74.2 1.9e-13
CCDS700.1 LPAR3 gene_id:23566|Hs108|chr1 ( 353) 426 70.0 3.5e-12
CCDS777.1 S1PR1 gene_id:1901|Hs108|chr1 ( 382) 416 68.7 9.5e-12
CCDS12229.1 S1PR2 gene_id:9294|Hs108|chr19 ( 353) 413 68.2 1.2e-11
CCDS6680.1 S1PR3 gene_id:1903|Hs108|chr9 ( 378) 408 67.6 2e-11
>>CCDS5079.1 GPR6 gene_id:2830|Hs108|chr6 (362 aa)
initn: 2363 init1: 2363 opt: 2363 Z-score: 1746.3 bits: 331.7 E(32554): 6e-91
Smith-Waterman score: 2363; 100.0% identity (100.0% similar) in 362 aa overlap (1-362:1-362)
10 20 30 40 50 60
pF1KE9 MNASAASLNDSQVVVVAAEGAAAAATAAGGPDTGEWGPPAAAALGAGGGANGSLELSSQL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS50 MNASAASLNDSQVVVVAAEGAAAAATAAGGPDTGEWGPPAAAALGAGGGANGSLELSSQL
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE9 SAGPPGLLLPAVNPWDVLLCVSGTVIAGENALVVALIASTPALRTPMFVLVGSLATADLL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS50 SAGPPGLLLPAVNPWDVLLCVSGTVIAGENALVVALIASTPALRTPMFVLVGSLATADLL
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE9 AGCGLILHFVFQYLVPSETVSLLTVGFLVASFAASVSSLLAITVDRYLSLYNALTYYSRR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS50 AGCGLILHFVFQYLVPSETVSLLTVGFLVASFAASVSSLLAITVDRYLSLYNALTYYSRR
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE9 TLLGVHLLLAATWTVSLGLGLLPVLGWNCLAERAACSVVRPLARSHVALLSAAFFMVFGI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS50 TLLGVHLLLAATWTVSLGLGLLPVLGWNCLAERAACSVVRPLARSHVALLSAAFFMVFGI
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE9 MLHLYVRICQVVWRHAHQIALQQHCLAPPHLAATRKGVGTLAVVLGTFGASWLPFAIYCV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS50 MLHLYVRICQVVWRHAHQIALQQHCLAPPHLAATRKGVGTLAVVLGTFGASWLPFAIYCV
250 260 270 280 290 300
310 320 330 340 350 360
pF1KE9 VGSHEDPAVYTYATLLPATYNSMINPIIYAFRNQEIQRALWLLLCGCFQSKVPFRSRSPS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS50 VGSHEDPAVYTYATLLPATYNSMINPIIYAFRNQEIQRALWLLLCGCFQSKVPFRSRSPS
310 320 330 340 350 360
pF1KE9 EV
::
CCDS50 EV
>>CCDS69172.1 GPR6 gene_id:2830|Hs108|chr6 (377 aa)
initn: 2363 init1: 2363 opt: 2363 Z-score: 1746.1 bits: 331.7 E(32554): 6.1e-91
Smith-Waterman score: 2363; 100.0% identity (100.0% similar) in 362 aa overlap (1-362:16-377)
10 20 30 40
pF1KE9 MNASAASLNDSQVVVVAAEGAAAAATAAGGPDTGEWGPPAAAALG
:::::::::::::::::::::::::::::::::::::::::::::
CCDS69 MTLLAWCTRGANPAAMNASAASLNDSQVVVVAAEGAAAAATAAGGPDTGEWGPPAAAALG
10 20 30 40 50 60
50 60 70 80 90 100
pF1KE9 AGGGANGSLELSSQLSAGPPGLLLPAVNPWDVLLCVSGTVIAGENALVVALIASTPALRT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS69 AGGGANGSLELSSQLSAGPPGLLLPAVNPWDVLLCVSGTVIAGENALVVALIASTPALRT
70 80 90 100 110 120
110 120 130 140 150 160
pF1KE9 PMFVLVGSLATADLLAGCGLILHFVFQYLVPSETVSLLTVGFLVASFAASVSSLLAITVD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS69 PMFVLVGSLATADLLAGCGLILHFVFQYLVPSETVSLLTVGFLVASFAASVSSLLAITVD
130 140 150 160 170 180
170 180 190 200 210 220
pF1KE9 RYLSLYNALTYYSRRTLLGVHLLLAATWTVSLGLGLLPVLGWNCLAERAACSVVRPLARS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS69 RYLSLYNALTYYSRRTLLGVHLLLAATWTVSLGLGLLPVLGWNCLAERAACSVVRPLARS
190 200 210 220 230 240
230 240 250 260 270 280
pF1KE9 HVALLSAAFFMVFGIMLHLYVRICQVVWRHAHQIALQQHCLAPPHLAATRKGVGTLAVVL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS69 HVALLSAAFFMVFGIMLHLYVRICQVVWRHAHQIALQQHCLAPPHLAATRKGVGTLAVVL
250 260 270 280 290 300
290 300 310 320 330 340
pF1KE9 GTFGASWLPFAIYCVVGSHEDPAVYTYATLLPATYNSMINPIIYAFRNQEIQRALWLLLC
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS69 GTFGASWLPFAIYCVVGSHEDPAVYTYATLLPATYNSMINPIIYAFRNQEIQRALWLLLC
310 320 330 340 350 360
350 360
pF1KE9 GCFQSKVPFRSRSPSEV
:::::::::::::::::
CCDS69 GCFQSKVPFRSRSPSEV
370
>>CCDS303.1 GPR3 gene_id:2827|Hs108|chr1 (330 aa)
initn: 1369 init1: 1272 opt: 1294 Z-score: 966.2 bits: 187.2 E(32554): 1.7e-47
Smith-Waterman score: 1294; 59.5% identity (83.7% similar) in 331 aa overlap (36-362:3-330)
10 20 30 40 50 60
pF1KE9 ASLNDSQVVVVAAEGAAAAATAAGGPDTGEWGPPAAAA-LGAGGGANGSLELSSQLSA-G
:: . : :.:: .:....:: : :
CCDS30 MMWGAGSPLAWLSAG---SGNVNVSSVGPAEG
10 20
70 80 90 100 110 120
pF1KE9 P--PGLLLPAVNPWDVLLCVSGTVIAGENALVVALIASTPALRTPMFVLVGSLATADLLA
: :. ::. . :::.::.:::... :::::::.:..:::.:.:::.::::::.:::::
CCDS30 PTGPAAPLPSPKAWDVVLCISGTLVSCENALVVAIIVGTPAFRAPMFLLVGSLAVADLLA
30 40 50 60 70 80
130 140 150 160 170 180
pF1KE9 GCGLILHFVFQYLVPSETVSLLTVGFLVASFAASVSSLLAITVDRYLSLYNALTYYSRRT
: ::.:::. . . : .::. :: :. .:.::..:::::::::::::::::::::. :
CCDS30 GLGLVLHFAAVFCIGSAEMSLVLVGVLAMAFTASIGSLLAITVDRYLSLYNALTYYSETT
90 100 110 120 130 140
190 200 210 220 230 240
pF1KE9 LLGVHLLLAATWTVSLGLGLLPVLGWNCLAERAACSVVRPLARSHVALLSAAFFMVFGIM
. ....:: .: .:::::::::.:::: ..:.:: ::...:...:. :::::::::
CCDS30 VTRTYVMLALVWGGALGLGLLPVLAWNCLDGLTTCGVVYPLSKNHLVVLAIAFFMVFGIM
150 160 170 180 190 200
250 260 270 280 290 300
pF1KE9 LHLYVRICQVVWRHAHQIALQQHCLAPPHLAATRKGVGTLAVVLGTFGASWLPFAIYCVV
:.::..::..: :::.:::::.: : : .:::::..:::::::.:.: ::::..::..
CCDS30 LQLYAQICRIVCRHAQQIALQRHLLPASHYVATRKGIATLAVVLGAFAACWLPFTVYCLL
210 220 230 240 250 260
310 320 330 340 350 360
pF1KE9 GSHEDPAVYTYATLLPATYNSMINPIIYAFRNQEIQRALWLLLCGCFQSKVPFRSRSPSE
:. ..: .::: :::::::::::::::::::::..:..:: . : : .::.::::::::.
CCDS30 GDAHSPPLYTYLTLLPATYNSMINPIIYAFRNQDVQKVLWAVCCCCSSSKIPFRSRSPSD
270 280 290 300 310 320
pF1KE9 V
:
CCDS30 V
330
>>CCDS9319.1 GPR12 gene_id:2835|Hs108|chr13 (334 aa)
initn: 1264 init1: 1243 opt: 1261 Z-score: 942.1 bits: 182.8 E(32554): 3.7e-46
Smith-Waterman score: 1261; 58.6% identity (86.2% similar) in 319 aa overlap (44-362:17-334)
20 30 40 50 60 70
pF1KE9 VVVAAEGAAAAATAAGGPDTGEWGPPAAAALGAGGGANGSLELSSQLSAGPPGLLLPAVN
: :... : : .::.. : : : .::
CCDS93 MNEDLKVNLSGLPRDYLDAAAAENISAAVSSRVPAVEPEPEL-VVN
10 20 30 40
80 90 100 110 120 130
pF1KE9 PWDVLLCVSGTVIAGENALVVALIASTPALRTPMFVLVGSLATADLLAGCGLILHFVFQY
:::..::.:::.:. :::.:: .: .:.::.:::.:.:::: :::::: ::: .::: :
CCDS93 PWDIVLCTSGTLISCENAIVVLIIFHNPSLRAPMFLLIGSLALADLLAGIGLITNFVFAY
50 60 70 80 90 100
140 150 160 170 180 190
pF1KE9 LVPSETVSLLTVGFLVASFAASVSSLLAITVDRYLSLYNALTYYSRRTLLGVHLLLAATW
:. ::...:.:.:..::::.::: :::::::::::::: ::::.:.::. ....:. :
CCDS93 LLQSEATKLVTIGLIVASFSASVCSLLAITVDRYLSLYYALTYHSERTVTFTYVMLVMLW
110 120 130 140 150 160
200 210 220 230 240 250
pF1KE9 TVSLGLGLLPVLGWNCLAERAACSVVRPLARSHVALLSAAFFMVFGIMLHLYVRICQVVW
.:. ::::::.::::: ....:::::::.....:.::..:...:..::.::..::..:
CCDS93 GTSICLGLLPVMGWNCLRDESTCSVVRPLTKNNAAILSVSFLFMFALMLQLYIQICKIVM
170 180 190 200 210 220
260 270 280 290 300 310
pF1KE9 RHAHQIALQQHCLAPPHLAATRKGVGTLAVVLGTFGASWLPFAIYCVVGSHEDPAVYTYA
:::::::::.: :: : ..:::::.:::..::::.: :.::..: ..... :..::::
CCDS93 RHAHQIALQHHFLATSHYVTTRKGVSTLAIILGTFAACWMPFTLYSLIADYTYPSIYTYA
230 240 250 260 270 280
320 330 340 350 360
pF1KE9 TLLPATYNSMINPIIYAFRNQEIQRALWLLLCGCFQSKVPFRSRSPSEV
:::::::::.:::.::::::::::.:: :. :::. :.. :.::::.:
CCDS93 TLLPATYNSIINPVIYAFRNQEIQKALCLICCGCIPSSLAQRARSPSDV
290 300 310 320 330
>>CCDS12407.1 LPAR2 gene_id:9170|Hs108|chr19 (351 aa)
initn: 286 init1: 124 opt: 457 Z-score: 354.8 bits: 74.2 E(32554): 1.9e-13
Smith-Waterman score: 457; 34.0% identity (64.9% similar) in 291 aa overlap (74-349:30-316)
50 60 70 80 90
pF1KE9 LGAGGGANGSLELSSQLSAGPPGLLLPAVNPWDVLLCVSGTVIAG----ENALVVALIAS
: ::.. . : ... : ::.: :::
CCDS12 MVIMGQCYYNETIGFFYNNSGKELSSHWRPKDVVVVALGLTVSVLVLLTNLLVIAAIAS
10 20 30 40 50
100 110 120 130 140 150
pF1KE9 TPALRTPMFVLVGSLATADLLAGCGLILHFVFQYLVPSETVSL----LTVGFLVASFAAS
. .. :.. :.:.::.:::.:: . : ..:. . .:: : :.: .:..::
CCDS12 NRRFHQPIYYLLGNLAAADLFAGVAY-LFLMFHTGPRTARLSLEGWFLRQGLLDTSLTAS
60 70 80 90 100 110
160 170 180 190 200 210
pF1KE9 VSSLLAITVDRYLSLYNALTYYSRRTLLGVHLLLAATWTVSLGLGLLPVLGWNCLAERAA
:..::::.:.:. :.. :. .:: : .:....:...:::::::. .:.::
CCDS12 VATLLAIAVERHRSVM-AVQLHSRLPRGRVVMLIVGVWVAALGLGLLPAHSWHCLCALDR
120 130 140 150 160 170
220 230 240 250 260 270
pF1KE9 CSVVRPL-ARSHVALLSAAFFMVFGIMLHLYVRICQVVWRHAHQIALQQHCLAPPHLAAT
:: . :: .::..:. . . ..:: .:. .:.:: : :.....: . : : . .:
CCDS12 CSRMAPLLSRSYLAVWALSSLLVFLLMVAVYTRIFFYVRRRVQRMAEHVSC-HPRYRETT
180 190 200 210 220 230
280 290 300 310 320
pF1KE9 RKGVGTLAVVLGTFGASWLPFAIYCVVG-----SHEDPAVYTYATLLPATYNSMINPIIY
. : :....::.: . : : . .. : . :: : :: : ::..: .:
CCDS12 LSLVKTVVIILGAFVVCWTPGQVVLLLDGLGCESCNVLAVEKYFLLL-AEANSLVNAAVY
240 250 260 270 280 290
330 340 350 360
pF1KE9 AFRNQEIQRALW-LLLCGCFQSKVPFRSRSPSEV
. :. :..:.. :: :.:..
CCDS12 SCRDAEMRRTFRRLLCCACLRQSTRESVHYTSSAQGGASTRIMLPENGHPLMDSTL
300 310 320 330 340 350
>>CCDS700.1 LPAR3 gene_id:23566|Hs108|chr1 (353 aa)
initn: 262 init1: 130 opt: 426 Z-score: 332.1 bits: 70.0 E(32554): 3.5e-12
Smith-Waterman score: 426; 31.6% identity (64.5% similar) in 301 aa overlap (77-362:32-327)
50 60 70 80 90 100
pF1KE9 GGGANGSLELSSQLSAGPPGLLLPAVNPWDVLLCVSGTV----IAGENALVVALIASTPA
..::: :: : :.::.: . ..
CCDS70 NECHYDKHMDFFYNRSNTDTVDDWTGTKLVIVLCV-GTFFCLFIFFSNSLVIAAVIKNRK
10 20 30 40 50 60
110 120 130 140 150
pF1KE9 LRTPMFVLVGSLATADLLAGCGLI-LHFVFQYLVPSETVS--LLTVGFLVASFAASVSSL
.. :.. :...::.::..:: . . : : . . ::. .: :.: .:..::...:
CCDS70 FHFPFYYLLANLAAADFFAGIAYVFLMFNTGPVSKTLTVNRWFLRQGLLDSSLTASLTNL
70 80 90 100 110 120
160 170 180 190 200 210
pF1KE9 LAITVDRYLSLYNALTYYSRRTLLGVHLLLAATWTVSLGLGLLPVLGWNCLAERAACSVV
:.:.:.:..:.. . .: : : ::. .:.... .: .:.:::::: . .::: .
CCDS70 LVIAVERHMSIMR-MRVHSNLTKKRVTLLILLVWAIAIFMGAVPTLGWNCLCNISACSSL
130 140 150 160 170
220 230 240 250 260 270
pF1KE9 RPL-ARSHVALLSAAFFMVFGIMLHLYVRICQVVWRHAHQIALQQHCLAPPHLAAT-RKG
:. .::.... ... .:.: ::. .:.:: : :... .:. : . : :
CCDS70 APIYSRSYLVFWTVSNLMAFLIMVVVYLRIYVYVKRKTN--VLSPHTSGSISRRRTPMKL
180 190 200 210 220 230
280 290 300 310 320 330
pF1KE9 VGTLAVVLGTFGASWLP-FAIYCVVGSHEDPAVYTYAT---LLPATYNSMINPIIYAFRN
. :. .:::.: . : : ... . : . .. :: : ::..:::::....
CCDS70 MKTVMTVLGAFVVCWTPGLVVLLLDGLNCRQCGVQHVKRWFLLLALLNSVVNPIIYSYKD
240 250 260 270 280 290
340 350 360
pF1KE9 QEIQRALWLLLCGCFQSKVPFR--SRSPSEV
... .. ..: ::... : : :: :: :
CCDS70 EDMYGTMKKMIC-CFSQENPERRPSRIPSTVLSRSDTGSQYIEDSISQGAVCNKSTS
300 310 320 330 340 350
>>CCDS777.1 S1PR1 gene_id:1901|Hs108|chr1 (382 aa)
initn: 376 init1: 171 opt: 416 Z-score: 324.4 bits: 68.7 E(32554): 9.5e-12
Smith-Waterman score: 417; 30.9% identity (63.9% similar) in 288 aa overlap (77-347:53-331)
50 60 70 80 90 100
pF1KE9 GGGANGSLELSSQLSAGPPGLLLPAVNPWDVLLCVSGTVIAGENALVVALIASTPALRTP
.:.: : :: .:. : .: .. :
CCDS77 DIIVRHYNYTGKLNISADKENSIKLTSVVFILICC---FIILENIFVLLTIWKTKKFHRP
30 40 50 60 70
110 120 130 140 150 160
pF1KE9 MFVLVGSLATADLLAGCG----LILHFVFQY-LVPSETVSLLTVGFLVASFAASVSSLLA
:. ..:.:: .::::: . :.: . : :.:.. .: : . ....::: ::::
CCDS77 MYYFIGNLALSDLLAGVAYTANLLLSGATTYKLTPAQW--FLREGSMFVALSASVFSLLA
80 90 100 110 120 130
170 180 190 200 210 220
pF1KE9 ITVDRYLSLYNALTYYSRRTLLGVHLLLAATWTVSLGLGLLPVLGWNCLAERAACSVVRP
:...::... . . .. . . . ::..: :..:: :: ::..::::.. ..::.: :
CCDS77 IAIERYITMLK-MKLHNGSNNFRLFLLISACWVISLILGGLPIMGWNCISALSSCSTVLP
140 150 160 170 180 190
230 240 250 260 270
pF1KE9 LARSHVALL-SAAFFMVFGIMLHLYVRICQVVWRHAHQIALQQHCLAPPHLAATRKGVG-
: ..: :. ...: ... .. :: :: ..: .......... . ...:...
CCDS77 LYHKHYILFCTTVFTLLLLSIVILYCRIYSLVRTRSRRLTFRKNISKASR--SSEKSLAL
200 210 220 230 240 250
280 290 300 310 320 330
pF1KE9 --TLAVVLGTFGASWLPFAIY------CVVGSHEDPAVYTYATLLPATYNSMINPIIYAF
:. .::..: : : :. : : : . : . :. :. :: :::::..
CCDS77 LKTVIIVLSVFIACWAPLFILLLLDVGCKVKTC-DILFRAEYFLVLAVLNSGTNPIIYTL
260 270 280 290 300 310
340 350 360
pF1KE9 RNQEIQRALWLLL--CGCFQSKVPFRSRSPSEV
:.:..::. .. : :
CCDS77 TNKEMRRAFIRIMSCCKCPSGDSAGKFKRPIIAGMEFSRSKSDNSSHPQKDEGDNPETIM
320 330 340 350 360 370
>>CCDS12229.1 S1PR2 gene_id:9294|Hs108|chr19 (353 aa)
initn: 365 init1: 176 opt: 413 Z-score: 322.6 bits: 68.2 E(32554): 1.2e-11
Smith-Waterman score: 445; 34.1% identity (61.8% similar) in 296 aa overlap (77-357:41-315)
50 60 70 80 90 100
pF1KE9 GGGANGSLELSSQLSAGPPGLLLPAVNPWDVLLCVSGTVIAGENALVVALIASTPALRTP
:.:: . .: :: ::. .: . ...
CCDS12 PNKVQEHYNYTKETLETQETTSRQVASAFIVILCCAIVV---ENLLVLIAVARNSKFHSA
20 30 40 50 60
110 120 130 140 150 160
pF1KE9 MFVLVGSLATADLLAGCGLILHFVFQYLVPSETVSLLTV------GFLVASFAASVSSLL
:....:.::..::::: ... . . : : :. : : : ...::: :::
CCDS12 MYLFLGNLAASDLLAGVAFVANTL---LSGSVTLRLTPVQWFAREGSAFITLSASVFSLL
70 80 90 100 110 120
170 180 190 200 210 220
pF1KE9 AITVDRYLSLYNALTYYSRRTLLGVHLLLAATWTVSLGLGLLPVLGWNCLAERAACSVVR
::...:.... .. : : .. . ::..:.: .:: :: ::.::::::.. :::.:
CCDS12 AIAIERHVAIAKVKLYGSDKSCRML-LLIGASWLISLVLGGLPILGWNCLGHLEACSTVL
130 140 150 160 170 180
230 240 250 260 270
pF1KE9 PLARSHVALLSAAFF-MVFGIMLHLYVRI-CQVVWRHAHQIALQQHCLAPPHLAATRKGV
:: .: .: ...: ... .. ::::: : : :: .: :. : :
CCDS12 PLYAKHYVLCVVTIFSIILLAIVALYVRIYCVVRSSHAD--------MAAPQTLALLK--
190 200 210 220 230
280 290 300 310 320 330
pF1KE9 GTLAVVLGTFGASWLP-FAIY-----CVVGSHEDPAVYTYATLLP-ATYNSMINPIIYAF
:...:::.: . ::: :.: : : : : .: .. .: ::..::.::..
CCDS12 -TVTIVLGVFIVCWLPAFSILLLDYACPV--HSCPILYKAHYFFAVSTLNSLLNPVIYTW
240 250 260 270 280 290
340 350 360
pF1KE9 RNQEIQRALWLLLCGCFQSKVPFRSRSPSEV
:.....: . : :.. : ..:
CCDS12 RSRDLRREV-LRPLQCWRPGVGVQGRRRGGTPGHHLLPLRSSSSLERGMHMPTSPTFLEG
300 310 320 330 340
>>CCDS6680.1 S1PR3 gene_id:1903|Hs108|chr9 (378 aa)
initn: 283 init1: 142 opt: 408 Z-score: 318.6 bits: 67.6 E(32554): 2e-11
Smith-Waterman score: 408; 29.2% identity (63.0% similar) in 281 aa overlap (77-348:44-317)
50 60 70 80 90 100
pF1KE9 GGGANGSLELSSQLSAGPPGLLLPAVNPWDVLLCVSGTVIAGENALVVALIASTPALRTP
::. : . :. :: .:. : .. ...
CCDS66 GNETLREHYQYVGKLAGRLKEASEGSTLTTVLFLVICSFIVLENLMVLIAIWKNNKFHNR
20 30 40 50 60 70
110 120 130 140 150 160
pF1KE9 MFVLVGSLATADLLAGCGLILHFVF---QYLVPSETVSLLTVGFLVASFAASVSSLLAIT
:. ..:.:: ::::: . ..... . . : :: .: : . ....::. :::::.
CCDS66 MYFFIGNLALCDLLAGIAYKVNILMSGKKTFSLSPTVWFLREGSMFVALGASTCSLLAIA
80 90 100 110 120 130
170 180 190 200 210 220
pF1KE9 VDRYLSLYNALTYYSRRTLLGVHLLLAATWTVSLGLGLLPVLGWNCLAERAACSVVRPL-
..:.:.. . : . . : ::.. : ... :: ::.:::::: . ::.. ::
CCDS66 IERHLTMIKMRPYDANKRHR-VFLLIGMCWLIAFTLGALPILGWNCLHNLPDCSTILPLY
140 150 160 170 180 190
230 240 250 260 270 280
pF1KE9 ARSHVALLSAAFFMVFGIMLHLYVRICQVVWRHAHQIALQQHCLAPPHLAATRKGVGTLA
.....:. . : .. .. ::.:: .: ....: .: . .: : :..
CCDS66 SKKYIAFCISIFTAILVTIVILYARIYFLVKSSSRKVA--NHNNSERSMALLR----TVV
200 210 220 230 240
290 300 310 320 330
pF1KE9 VVLGTFGASWLPFAIYCVVGS----HEDPAVYTYATLLP-ATYNSMINPIIYAFRNQEIQ
.:...: : : :. : .. . : .. .. :. :: .::.::.. ..:..
CCDS66 IVVSVFIACWSPLFILFLIDVACRVQACPILFKAQWFIVLAVLNSAMNPVIYTLASKEMR
250 260 270 280 290 300
340 350 360
pF1KE9 RALWLLLCGCFQSKVPFRSRSPSEV
::.. :.:.:.
CCDS66 RAFFRLVCNCLVRGRGARASPIQPALDPSRSKSSSSNNSSHSPKVKEDLPHTAPSSCIMD
310 320 330 340 350 360
362 residues in 1 query sequences
18511270 residues in 32554 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Sun Nov 6 16:30:24 2016 done: Sun Nov 6 16:30:24 2016
Total Scan time: 3.050 Total Display time: 0.030
Function used was FASTA [36.3.4 Apr, 2011]