Result of FASTA (omim) for
pFN21AE9288
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KE9288, 539 aa
1>>>pF1KE9288 539 - 539 aa - 539 aa
Library: /omim/omim.rfq.tfa
60827320 residues in 85289 sequences
Statistics: Expectation_n fit: rho(ln(x))= 8.4933+/-0.000357; mu= 6.8783+/- 0.022
mean_var=344.3199+/-74.670, 0's: 0 Z-trim(123.5): 1392 B-trim: 27 in 1/55
Lambda= 0.069118
statistics sampled from 41562 (43416) to 41562 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.807), E-opt: 0.2 (0.509), width: 16
Scan time: 7.710
The best scores are: opt bits E(85289)
NP_689500 (OMIM: 608460) zinc finger protein 276 i ( 539) 3804 393.3 1e-108
NP_001106997 (OMIM: 608460) zinc finger protein 27 ( 614) 3804 393.3 1.1e-108
XP_016879378 (OMIM: 608460) PREDICTED: zinc finger ( 401) 2195 232.6 1.7e-60
XP_005256385 (OMIM: 608460) PREDICTED: zinc finger ( 400) 1797 193.0 1.5e-48
XP_016879379 (OMIM: 608460) PREDICTED: zinc finger ( 400) 1797 193.0 1.5e-48
XP_005256381 (OMIM: 608460) PREDICTED: zinc finger ( 597) 1797 193.2 1.9e-48
NP_620138 (OMIM: 611371) zinc finger protein 653 [ ( 615) 593 73.2 2.7e-12
XP_016882735 (OMIM: 601505) PREDICTED: zinc finger ( 292) 330 46.5 0.00014
XP_016882733 (OMIM: 601505) PREDICTED: zinc finger ( 292) 330 46.5 0.00014
XP_016882736 (OMIM: 601505) PREDICTED: zinc finger ( 292) 330 46.5 0.00014
NP_009076 (OMIM: 601505) zinc finger protein OZF [ ( 292) 330 46.5 0.00014
NP_001093108 (OMIM: 601505) zinc finger protein OZ ( 292) 330 46.5 0.00014
XP_016882734 (OMIM: 601505) PREDICTED: zinc finger ( 292) 330 46.5 0.00014
XP_005259271 (OMIM: 601505) PREDICTED: zinc finger ( 292) 330 46.5 0.00014
NP_001093109 (OMIM: 601505) zinc finger protein OZ ( 292) 330 46.5 0.00014
XP_011525495 (OMIM: 194545) PREDICTED: endothelial ( 549) 329 46.8 0.00021
XP_016882567 (OMIM: 194545) PREDICTED: endothelial ( 549) 329 46.8 0.00021
XP_016882568 (OMIM: 194545) PREDICTED: endothelial ( 549) 329 46.8 0.00021
NP_003399 (OMIM: 602951) zinc finger protein 37 ho ( 630) 329 46.8 0.00023
NP_001269447 (OMIM: 602951) zinc finger protein 37 ( 631) 329 46.8 0.00023
NP_001269444 (OMIM: 602951) zinc finger protein 37 ( 645) 329 46.9 0.00023
NP_001311268 (OMIM: 602444) zinc finger protein 35 ( 563) 327 46.6 0.00025
XP_011532947 (OMIM: 602444) PREDICTED: zinc finger ( 563) 327 46.6 0.00025
NP_005640 (OMIM: 602444) zinc finger protein 354A ( 605) 327 46.6 0.00026
XP_016865280 (OMIM: 602444) PREDICTED: zinc finger ( 605) 327 46.6 0.00026
NP_001229813 (OMIM: 604084) zinc finger and BTB do ( 721) 321 46.1 0.00043
XP_011540390 (OMIM: 604084) PREDICTED: zinc finger ( 721) 321 46.1 0.00043
XP_011540388 (OMIM: 604084) PREDICTED: zinc finger ( 728) 321 46.1 0.00043
XP_016857731 (OMIM: 604084) PREDICTED: zinc finger ( 728) 321 46.1 0.00043
XP_011540389 (OMIM: 604084) PREDICTED: zinc finger ( 728) 321 46.1 0.00043
XP_016869854 (OMIM: 603404) PREDICTED: zinc finger ( 412) 316 45.3 0.00044
XP_016869855 (OMIM: 603404) PREDICTED: zinc finger ( 412) 316 45.3 0.00044
NP_001288204 (OMIM: 603404) zinc finger protein 16 ( 412) 316 45.3 0.00044
XP_016882230 (OMIM: 613749) PREDICTED: zinc finger ( 412) 315 45.2 0.00047
XP_011525199 (OMIM: 613749) PREDICTED: zinc finger ( 412) 315 45.2 0.00047
NP_001159509 (OMIM: 613749) zinc finger protein 26 ( 412) 315 45.2 0.00047
NP_001012774 (OMIM: 613749) zinc finger protein 26 ( 412) 315 45.2 0.00047
NP_001159510 (OMIM: 613749) zinc finger protein 26 ( 412) 315 45.2 0.00047
NP_001159508 (OMIM: 613749) zinc finger protein 26 ( 412) 315 45.2 0.00047
XP_005253184 (OMIM: 603433) PREDICTED: zinc finger ( 435) 315 45.2 0.00049
XP_006720895 (OMIM: 604191) PREDICTED: zinc finger ( 644) 318 45.8 0.0005
XP_016869853 (OMIM: 603404) PREDICTED: zinc finger ( 590) 316 45.5 0.00054
XP_016869852 (OMIM: 603404) PREDICTED: zinc finger ( 591) 316 45.5 0.00054
NP_919301 (OMIM: 603404) zinc finger protein 169 i ( 603) 316 45.5 0.00055
XP_016869851 (OMIM: 603404) PREDICTED: zinc finger ( 604) 316 45.5 0.00055
NP_003439 (OMIM: 603404) zinc finger protein 169 i ( 604) 316 45.5 0.00055
NP_056209 (OMIM: 194538) zinc finger protein 10 [H ( 573) 315 45.4 0.00057
XP_016873745 (OMIM: 603433) PREDICTED: zinc finger ( 606) 315 45.4 0.00059
NP_001269586 (OMIM: 603433) zinc finger protein 14 ( 607) 315 45.4 0.00059
XP_016867288 (OMIM: 614040) PREDICTED: zinc finger ( 770) 317 45.8 0.00059
>>NP_689500 (OMIM: 608460) zinc finger protein 276 isofo (539 aa)
initn: 3804 init1: 3804 opt: 3804 Z-score: 2072.8 bits: 393.3 E(85289): 1e-108
Smith-Waterman score: 3804; 99.6% identity (99.8% similar) in 539 aa overlap (1-539:1-539)
10 20 30 40 50 60
pF1KE9 MGHCRLCHGKFSSRSLRSISERAPGASMERPSAEERVLVRDFQRLLGVAVRQDPTLSPFV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_689 MGHCRLCHGKFSSRSLRSISERAPGASMERPSAEERVLVRDFQRLLGVAVRQDPTLSPFV
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE9 CKSCHAQFYQCHSLLKSFLQRVNASPAGRRKPCAKVGAQPPTGAEEGACLVDLITSSPQC
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_689 CKSCHAQFYQCHSLLKSFLQRVNASPAGRRKPCAKVGAQPPTGAEEGACLVDLITSSPQC
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE9 LHGLVGWVHGHAASCGALPHLQRTLSSEYCGVIQVVWGCDQGHDYTMDTSSSCKAFLLDS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_689 LHGLVGWVHGHAASCGALPHLQRTLSSEYCGVIQVVWGCDQGHDYTMDTSSSCKAFLLDS
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE9 ALAVKWPRDKETAPRLPQHRGWNPGDAPQTSQGRGTGTPVGAETKTLPSTDVAQPPSDSD
::::::: ::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_689 ALAVKWPWDKETAPRLPQHRGWNPGDAPQTSQGRGTGTPVGAETKTLPSTDVAQPPSDSD
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE9 AVGPRSGFPPQPSLPLCRAPGQLGEKQLPSSTSDDRVKDEFSDLSEGDVLSEDENDKKQN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_689 AVGPRSGFPPQPSLPLCRAPGQLGEKQLPSSTSDDRVKDEFSDLSEGDVLSEDENDKKQN
250 260 270 280 290 300
310 320 330 340 350 360
pF1KE9 AQSSDESFEPYPERKVSGKKSESKEAKKSEEPRIRKKPGPKPGWKKKLRCEREELPTIHK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::.:
NP_689 AQSSDESFEPYPERKVSGKKSESKEAKKSEEPRIRKKPGPKPGWKKKLRCEREELPTIYK
310 320 330 340 350 360
370 380 390 400 410 420
pF1KE9 CPYQGCTAVYRGADGMKKHIKEHHEEVRERPCPHPGCNKVFMIDRYLQRHVKLIHTEVRN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_689 CPYQGCTAVYRGADGMKKHIKEHHEEVRERPCPHPGCNKVFMIDRYLQRHVKLIHTEVRN
370 380 390 400 410 420
430 440 450 460 470 480
pF1KE9 YICDECGQTFKQRKHLLVHQMRHSGAKPLQCEVCGFQCRQRASLKYHMTKHKAETELDFA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_689 YICDECGQTFKQRKHLLVHQMRHSGAKPLQCEVCGFQCRQRASLKYHMTKHKAETELDFA
430 440 450 460 470 480
490 500 510 520 530
pF1KE9 CDQCGRRFEKAHNLNVHMSMVHPLTQTQDKALPLEAEPPPGPPSPSVTTEGQAVKPEPT
:::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_689 CDQCGRRFEKAHNLNVHMSMVHPLTQTQDKALPLEAEPPPGPPSPSVTTEGQAVKPEPT
490 500 510 520 530
>>NP_001106997 (OMIM: 608460) zinc finger protein 276 is (614 aa)
initn: 3804 init1: 3804 opt: 3804 Z-score: 2072.2 bits: 393.3 E(85289): 1.1e-108
Smith-Waterman score: 3804; 99.6% identity (99.8% similar) in 539 aa overlap (1-539:76-614)
10 20 30
pF1KE9 MGHCRLCHGKFSSRSLRSISERAPGASMER
::::::::::::::::::::::::::::::
NP_001 TARRAWGPVGSCGDAGEDGADEAGAGRALAMGHCRLCHGKFSSRSLRSISERAPGASMER
50 60 70 80 90 100
40 50 60 70 80 90
pF1KE9 PSAEERVLVRDFQRLLGVAVRQDPTLSPFVCKSCHAQFYQCHSLLKSFLQRVNASPAGRR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 PSAEERVLVRDFQRLLGVAVRQDPTLSPFVCKSCHAQFYQCHSLLKSFLQRVNASPAGRR
110 120 130 140 150 160
100 110 120 130 140 150
pF1KE9 KPCAKVGAQPPTGAEEGACLVDLITSSPQCLHGLVGWVHGHAASCGALPHLQRTLSSEYC
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 KPCAKVGAQPPTGAEEGACLVDLITSSPQCLHGLVGWVHGHAASCGALPHLQRTLSSEYC
170 180 190 200 210 220
160 170 180 190 200 210
pF1KE9 GVIQVVWGCDQGHDYTMDTSSSCKAFLLDSALAVKWPRDKETAPRLPQHRGWNPGDAPQT
::::::::::::::::::::::::::::::::::::: ::::::::::::::::::::::
NP_001 GVIQVVWGCDQGHDYTMDTSSSCKAFLLDSALAVKWPWDKETAPRLPQHRGWNPGDAPQT
230 240 250 260 270 280
220 230 240 250 260 270
pF1KE9 SQGRGTGTPVGAETKTLPSTDVAQPPSDSDAVGPRSGFPPQPSLPLCRAPGQLGEKQLPS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 SQGRGTGTPVGAETKTLPSTDVAQPPSDSDAVGPRSGFPPQPSLPLCRAPGQLGEKQLPS
290 300 310 320 330 340
280 290 300 310 320 330
pF1KE9 STSDDRVKDEFSDLSEGDVLSEDENDKKQNAQSSDESFEPYPERKVSGKKSESKEAKKSE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 STSDDRVKDEFSDLSEGDVLSEDENDKKQNAQSSDESFEPYPERKVSGKKSESKEAKKSE
350 360 370 380 390 400
340 350 360 370 380 390
pF1KE9 EPRIRKKPGPKPGWKKKLRCEREELPTIHKCPYQGCTAVYRGADGMKKHIKEHHEEVRER
::::::::::::::::::::::::::::.:::::::::::::::::::::::::::::::
NP_001 EPRIRKKPGPKPGWKKKLRCEREELPTIYKCPYQGCTAVYRGADGMKKHIKEHHEEVRER
410 420 430 440 450 460
400 410 420 430 440 450
pF1KE9 PCPHPGCNKVFMIDRYLQRHVKLIHTEVRNYICDECGQTFKQRKHLLVHQMRHSGAKPLQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 PCPHPGCNKVFMIDRYLQRHVKLIHTEVRNYICDECGQTFKQRKHLLVHQMRHSGAKPLQ
470 480 490 500 510 520
460 470 480 490 500 510
pF1KE9 CEVCGFQCRQRASLKYHMTKHKAETELDFACDQCGRRFEKAHNLNVHMSMVHPLTQTQDK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 CEVCGFQCRQRASLKYHMTKHKAETELDFACDQCGRRFEKAHNLNVHMSMVHPLTQTQDK
530 540 550 560 570 580
520 530
pF1KE9 ALPLEAEPPPGPPSPSVTTEGQAVKPEPT
:::::::::::::::::::::::::::::
NP_001 ALPLEAEPPPGPPSPSVTTEGQAVKPEPT
590 600 610
>>XP_016879378 (OMIM: 608460) PREDICTED: zinc finger pro (401 aa)
initn: 2195 init1: 2195 opt: 2195 Z-score: 1207.0 bits: 232.6 E(85289): 1.7e-60
Smith-Waterman score: 2195; 99.7% identity (99.7% similar) in 314 aa overlap (1-314:76-389)
10 20 30
pF1KE9 MGHCRLCHGKFSSRSLRSISERAPGASMER
::::::::::::::::::::::::::::::
XP_016 TARRAWGPVGSCGDAGEDGADEAGAGRALAMGHCRLCHGKFSSRSLRSISERAPGASMER
50 60 70 80 90 100
40 50 60 70 80 90
pF1KE9 PSAEERVLVRDFQRLLGVAVRQDPTLSPFVCKSCHAQFYQCHSLLKSFLQRVNASPAGRR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 PSAEERVLVRDFQRLLGVAVRQDPTLSPFVCKSCHAQFYQCHSLLKSFLQRVNASPAGRR
110 120 130 140 150 160
100 110 120 130 140 150
pF1KE9 KPCAKVGAQPPTGAEEGACLVDLITSSPQCLHGLVGWVHGHAASCGALPHLQRTLSSEYC
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 KPCAKVGAQPPTGAEEGACLVDLITSSPQCLHGLVGWVHGHAASCGALPHLQRTLSSEYC
170 180 190 200 210 220
160 170 180 190 200 210
pF1KE9 GVIQVVWGCDQGHDYTMDTSSSCKAFLLDSALAVKWPRDKETAPRLPQHRGWNPGDAPQT
::::::::::::::::::::::::::::::::::::: ::::::::::::::::::::::
XP_016 GVIQVVWGCDQGHDYTMDTSSSCKAFLLDSALAVKWPWDKETAPRLPQHRGWNPGDAPQT
230 240 250 260 270 280
220 230 240 250 260 270
pF1KE9 SQGRGTGTPVGAETKTLPSTDVAQPPSDSDAVGPRSGFPPQPSLPLCRAPGQLGEKQLPS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 SQGRGTGTPVGAETKTLPSTDVAQPPSDSDAVGPRSGFPPQPSLPLCRAPGQLGEKQLPS
290 300 310 320 330 340
280 290 300 310 320 330
pF1KE9 STSDDRVKDEFSDLSEGDVLSEDENDKKQNAQSSDESFEPYPERKVSGKKSESKEAKKSE
::::::::::::::::::::::::::::::::::::::::::::
XP_016 STSDDRVKDEFSDLSEGDVLSEDENDKKQNAQSSDESFEPYPERNPIPSSTQNTPR
350 360 370 380 390 400
340 350 360 370 380 390
pF1KE9 EPRIRKKPGPKPGWKKKLRCEREELPTIHKCPYQGCTAVYRGADGMKKHIKEHHEEVRER
>>XP_005256385 (OMIM: 608460) PREDICTED: zinc finger pro (400 aa)
initn: 1797 init1: 1797 opt: 1797 Z-score: 992.6 bits: 193.0 E(85289): 1.5e-48
Smith-Waterman score: 1814; 76.4% identity (83.8% similar) in 364 aa overlap (202-539:39-400)
180 190 200 210 220
pF1KE9 SCKAFLLDSALAVKWPRDKETAPRLPQHRGWNPGDAPQTS------QGRGTGTPVGAETK
: :. : . : :. : :: . .
XP_005 PCPTFRGHCPPSTAASSRSCGAATRATTTPWIPAPAARPSCWTVRWQSSGHGTK--RRRH
10 20 30 40 50 60
230 240 250 260
pF1KE9 TLPSTD---VAQP--PSDSDAVGPRSGFPPQPS----LP-LCRA-----PGQLGE--KQL
:::. ...: : .. ::. :. :.: : : :. ::. .. .
XP_005 GCPSTEGGTLGMPLRPPRVEGQGPQLGLRPRPCPARMWPSLLRTATRWGPGRASHLSQAC
70 80 90 100 110 120
270 280 290 300 310 320
pF1KE9 P-SSTSDDRVKDEFSDLSE--GDVLSEDENDKKQNAQSSDESFEPYPERKVSGKKSESKE
: .. . . :.. : . :::::::::::::::::::::::::::::::::::::::
XP_005 PFAGPQGSWVRSSFHLQPRMIGDVLSEDENDKKQNAQSSDESFEPYPERKVSGKKSESKE
130 140 150 160 170 180
330 340 350 360 370 380
pF1KE9 AKKSEEPRIRKKPGPKPGWKKKLRCEREELPTIHKCPYQGCTAVYRGADGMKKHIKEHHE
:::::::::::::::::::::::::::::::::.::::::::::::::::::::::::::
XP_005 AKKSEEPRIRKKPGPKPGWKKKLRCEREELPTIYKCPYQGCTAVYRGADGMKKHIKEHHE
190 200 210 220 230 240
390 400 410 420 430 440
pF1KE9 EVRERPCPHPGCNKVFMIDRYLQRHVKLIHTEVRNYICDECGQTFKQRKHLLVHQMRHSG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 EVRERPCPHPGCNKVFMIDRYLQRHVKLIHTEVRNYICDECGQTFKQRKHLLVHQMRHSG
250 260 270 280 290 300
450 460 470 480 490 500
pF1KE9 AKPLQCEVCGFQCRQRASLKYHMTKHKAETELDFACDQCGRRFEKAHNLNVHMSMVHPLT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 AKPLQCEVCGFQCRQRASLKYHMTKHKAETELDFACDQCGRRFEKAHNLNVHMSMVHPLT
310 320 330 340 350 360
510 520 530
pF1KE9 QTQDKALPLEAEPPPGPPSPSVTTEGQAVKPEPT
::::::::::::::::::::::::::::::::::
XP_005 QTQDKALPLEAEPPPGPPSPSVTTEGQAVKPEPT
370 380 390 400
>>XP_016879379 (OMIM: 608460) PREDICTED: zinc finger pro (400 aa)
initn: 1797 init1: 1797 opt: 1797 Z-score: 992.6 bits: 193.0 E(85289): 1.5e-48
Smith-Waterman score: 1814; 76.4% identity (83.8% similar) in 364 aa overlap (202-539:39-400)
180 190 200 210 220
pF1KE9 SCKAFLLDSALAVKWPRDKETAPRLPQHRGWNPGDAPQTS------QGRGTGTPVGAETK
: :. : . : :. : :: . .
XP_016 PCPTFRGHCPPSTAASSRSCGAATRATTTPWIPAPAARPSCWTVRWQSSGHGTK--RRRH
10 20 30 40 50 60
230 240 250 260
pF1KE9 TLPSTD---VAQP--PSDSDAVGPRSGFPPQPS----LP-LCRA-----PGQLGE--KQL
:::. ...: : .. ::. :. :.: : : :. ::. .. .
XP_016 GCPSTEGGTLGMPLRPPRVEGQGPQLGLRPRPCPARMWPSLLRTATRWGPGRASHLSQAC
70 80 90 100 110 120
270 280 290 300 310 320
pF1KE9 P-SSTSDDRVKDEFSDLSE--GDVLSEDENDKKQNAQSSDESFEPYPERKVSGKKSESKE
: .. . . :.. : . :::::::::::::::::::::::::::::::::::::::
XP_016 PFAGPQGSWVRSSFHLQPRMIGDVLSEDENDKKQNAQSSDESFEPYPERKVSGKKSESKE
130 140 150 160 170 180
330 340 350 360 370 380
pF1KE9 AKKSEEPRIRKKPGPKPGWKKKLRCEREELPTIHKCPYQGCTAVYRGADGMKKHIKEHHE
:::::::::::::::::::::::::::::::::.::::::::::::::::::::::::::
XP_016 AKKSEEPRIRKKPGPKPGWKKKLRCEREELPTIYKCPYQGCTAVYRGADGMKKHIKEHHE
190 200 210 220 230 240
390 400 410 420 430 440
pF1KE9 EVRERPCPHPGCNKVFMIDRYLQRHVKLIHTEVRNYICDECGQTFKQRKHLLVHQMRHSG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 EVRERPCPHPGCNKVFMIDRYLQRHVKLIHTEVRNYICDECGQTFKQRKHLLVHQMRHSG
250 260 270 280 290 300
450 460 470 480 490 500
pF1KE9 AKPLQCEVCGFQCRQRASLKYHMTKHKAETELDFACDQCGRRFEKAHNLNVHMSMVHPLT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 AKPLQCEVCGFQCRQRASLKYHMTKHKAETELDFACDQCGRRFEKAHNLNVHMSMVHPLT
310 320 330 340 350 360
510 520 530
pF1KE9 QTQDKALPLEAEPPPGPPSPSVTTEGQAVKPEPT
::::::::::::::::::::::::::::::::::
XP_016 QTQDKALPLEAEPPPGPPSPSVTTEGQAVKPEPT
370 380 390 400
>>XP_005256381 (OMIM: 608460) PREDICTED: zinc finger pro (597 aa)
initn: 2550 init1: 1797 opt: 1797 Z-score: 990.7 bits: 193.2 E(85289): 1.9e-48
Smith-Waterman score: 2523; 71.9% identity (79.3% similar) in 556 aa overlap (1-539:76-597)
10 20 30
pF1KE9 MGHCRLCHGKFSSRSLRSISERAPGASMER
::::::::::::::::::::::::::::::
XP_005 TARRAWGPVGSCGDAGEDGADEAGAGRALAMGHCRLCHGKFSSRSLRSISERAPGASMER
50 60 70 80 90 100
40 50 60 70 80 90
pF1KE9 PSAEERVLVRDFQRLLGVAVRQDPTLSPFVCKSCHAQFYQCHSLLKSFLQRVNASPAGRR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 PSAEERVLVRDFQRLLGVAVRQDPTLSPFVCKSCHAQFYQCHSLLKSFLQRVNASPAGRR
110 120 130 140 150 160
100 110 120 130 140 150
pF1KE9 KPCAKVGAQPPTGAEEGACLVDLITSSPQCLHGLVGWVHGHAASCGALPHLQRTLSSEYC
:::::::::::::::::::: . : ..: : : .. .. :
XP_005 KPCAKVGAQPPTGAEEGACL-----APSAC----TAWWGG----C-----MDMRPAAGPC
170 180 190 200
160 170 180 190 200
pF1KE9 GVIQVVWGCDQGH--DYTMDTSSSCKAFLLDSALAVKWPRDKETAPRLPQHRGWNPGDAP
... :: : .: :: : : .. : . : : :. ..
XP_005 PTFR-------GHCPPSTAASSRSCGA--ATRATTTPWIPAPAARPSCWTVR-WQ--SSG
210 220 230 240 250
210 220 230 240 250
pF1KE9 QTSQGRGTGTPVGAETKTLPSTDVAQPPSDSDAVGPRSGFPPQPS----LP-LCRA----
. .. : : : ..: :: .:: .. ::. :. :.: : : :.
XP_005 HGTKRRRHGCP-STEGGTLGMP--LRPPR-VEGQGPQLGLRPRPCPARMWPSLLRTATRW
260 270 280 290 300 310
260 270 280 290 300 310
pF1KE9 -PGQLGE--KQLP-SSTSDDRVKDEFSDLSE--GDVLSEDENDKKQNAQSSDESFEPYPE
::. .. . : .. . . :.. : . :::::::::::::::::::::::::::
XP_005 GPGRASHLSQACPFAGPQGSWVRSSFHLQPRMIGDVLSEDENDKKQNAQSSDESFEPYPE
320 330 340 350 360 370
320 330 340 350 360 370
pF1KE9 RKVSGKKSESKEAKKSEEPRIRKKPGPKPGWKKKLRCEREELPTIHKCPYQGCTAVYRGA
:::::::::::::::::::::::::::::::::::::::::::::.::::::::::::::
XP_005 RKVSGKKSESKEAKKSEEPRIRKKPGPKPGWKKKLRCEREELPTIYKCPYQGCTAVYRGA
380 390 400 410 420 430
380 390 400 410 420 430
pF1KE9 DGMKKHIKEHHEEVRERPCPHPGCNKVFMIDRYLQRHVKLIHTEVRNYICDECGQTFKQR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 DGMKKHIKEHHEEVRERPCPHPGCNKVFMIDRYLQRHVKLIHTEVRNYICDECGQTFKQR
440 450 460 470 480 490
440 450 460 470 480 490
pF1KE9 KHLLVHQMRHSGAKPLQCEVCGFQCRQRASLKYHMTKHKAETELDFACDQCGRRFEKAHN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 KHLLVHQMRHSGAKPLQCEVCGFQCRQRASLKYHMTKHKAETELDFACDQCGRRFEKAHN
500 510 520 530 540 550
500 510 520 530
pF1KE9 LNVHMSMVHPLTQTQDKALPLEAEPPPGPPSPSVTTEGQAVKPEPT
::::::::::::::::::::::::::::::::::::::::::::::
XP_005 LNVHMSMVHPLTQTQDKALPLEAEPPPGPPSPSVTTEGQAVKPEPT
560 570 580 590
>>NP_620138 (OMIM: 611371) zinc finger protein 653 [Homo (615 aa)
initn: 635 init1: 405 opt: 593 Z-score: 341.7 bits: 73.2 E(85289): 2.7e-12
Smith-Waterman score: 593; 37.6% identity (68.6% similar) in 226 aa overlap (278-503:389-610)
250 260 270 280 290 300
pF1KE9 FPPQPSLPLCRAPGQLGEKQLPSSTSDDRVKDEFSDLSEGDVLSEDENDKKQNAQSSDES
: : :: ..: . : . ::
NP_620 MEGVAAYTQTEPEGSQPSTMDATAVAGIETKKEKEDLCLLKKEEKEEPVAPELATTVPES
360 370 380 390 400 410
310 320 330 340 350 360
pF1KE9 FEPYPERKVSGKKSESKEAKKSEEPRIRKKPGPKPGWKKKLRCEREELPTIHKCPYQGCT
:: : ...:.. .... . . .: :.: . :.. . . : . .:::.::.
NP_620 AEP--EAEADGEELDGSDMS-AIIYEIPKEPEKRRRSKRSRVMDADGLLEMFHCPYEGCS
420 430 440 450 460 470
370 380 390 400 410 420
pF1KE9 AVYRGADGMKKHIKEHHEEVRERPCPHPGCNKVFMIDRYLQRHVKLIHTEVRNYICDECG
:: . .....:.. :.. . . ::::::.: :... .:.::. .::. ::.. :. ::
NP_620 QVYVALSSFQNHVNLVHRKGKTKVCPHPGCGKKFYLSNHLRRHM-IIHSGVREFTCETCG
480 490 500 510 520 530
430 440 450 460 470 480
pF1KE9 QTFKQRKHLLVHQMRHSGAKPLQCEVCGFQCRQRASLKYHMTKHKAETELDFACDQCGRR
..::...:: ::. :.: :::::.::.::::::::..:: :: ::.. .:.::.::.:
NP_620 KSFKRKNHLEVHRRTHTGETPLQCEICGYQCRQRASLNWHMKKHTAEVQYNFTCDRCGKR
540 550 560 570 580 590
490 500 510 520 530
pF1KE9 FEKAHNLNVHMSMVHPLTQTQDKALPLEAEPPPGPPSPSVTTEGQAVKPEPT
::: ... : ::
NP_620 FEKLDSVKFHTLKSHPDHKPT
600 610
>>XP_016882735 (OMIM: 601505) PREDICTED: zinc finger pro (292 aa)
initn: 527 init1: 205 opt: 330 Z-score: 203.4 bits: 46.5 E(85289): 0.00014
Smith-Waterman score: 330; 30.8% identity (56.9% similar) in 211 aa overlap (297-500:61-261)
270 280 290 300 310 320
pF1KE9 QLPSSTSDDRVKDEFSDLSEGDVLSEDENDKKQNAQSSDESFEPYPERKVSGKKSE---S
:.::...... :: : ..: .
XP_016 LTEHEHFHTREKPFECNECGKAFSQKQYVIKHQNTHTGEKLFECNECGKSFSQKENLLTH
40 50 60 70 80 90
330 340 350 360 370
pF1KE9 KEAKKSEEPRIRKKPGPKPGWKKKL-RCERE---ELPTIHKCPYQGCTAVYRGADGMKKH
.. . .:.: : : :..: : .: : : . : . : .. : ... .:
XP_016 QKIHTGEKPFECKDCGKAFIQKSNLIRHQRTHTGEKPFV--C--KECGKTFSGKSNLTEH
100 110 120 130 140
380 390 400 410 420 430
pF1KE9 IKEHHEEVRERPCPHPGCNKVFMIDRYLQRHVKLIHTEVRNYICDECGQTFKQRKHLLVH
: : . :.: :. .: .:: .: . ::: . : :.:::..:.:: :.::
XP_016 EKIH---IGEKPFKCSECGTAFGQKKYLIKH-QNIHTGEKPYECNECGKAFSQRTSLIVH
150 160 170 180 190 200
440 450 460 470 480 490
pF1KE9 QMRHSGAKPLQCEVCGFQCRQRASLKYHMTKHKAETELDFACDQCGRRFEKAHNLNVHMS
::: :: .:.::: : .:: :. .: .: ..:..::. : . .: .:.
XP_016 VRIHSGDKPYECNVCGKAFSQSSSLTVHVRSHTGEK--PYGCNECGKAFSQFSTLALHLR
210 220 230 240 250 260
500 510 520 530
pF1KE9 MVHPLTQTQDKALPLEAEPPPGPPSPSVTTEGQAVKPEPT
.
XP_016 IHTGKKPYQCSECGKAFSQKSHHIRHQKIHTH
270 280 290
>>XP_016882733 (OMIM: 601505) PREDICTED: zinc finger pro (292 aa)
initn: 527 init1: 205 opt: 330 Z-score: 203.4 bits: 46.5 E(85289): 0.00014
Smith-Waterman score: 330; 30.8% identity (56.9% similar) in 211 aa overlap (297-500:61-261)
270 280 290 300 310 320
pF1KE9 QLPSSTSDDRVKDEFSDLSEGDVLSEDENDKKQNAQSSDESFEPYPERKVSGKKSE---S
:.::...... :: : ..: .
XP_016 LTEHEHFHTREKPFECNECGKAFSQKQYVIKHQNTHTGEKLFECNECGKSFSQKENLLTH
40 50 60 70 80 90
330 340 350 360 370
pF1KE9 KEAKKSEEPRIRKKPGPKPGWKKKL-RCERE---ELPTIHKCPYQGCTAVYRGADGMKKH
.. . .:.: : : :..: : .: : : . : . : .. : ... .:
XP_016 QKIHTGEKPFECKDCGKAFIQKSNLIRHQRTHTGEKPFV--C--KECGKTFSGKSNLTEH
100 110 120 130 140
380 390 400 410 420 430
pF1KE9 IKEHHEEVRERPCPHPGCNKVFMIDRYLQRHVKLIHTEVRNYICDECGQTFKQRKHLLVH
: : . :.: :. .: .:: .: . ::: . : :.:::..:.:: :.::
XP_016 EKIH---IGEKPFKCSECGTAFGQKKYLIKH-QNIHTGEKPYECNECGKAFSQRTSLIVH
150 160 170 180 190 200
440 450 460 470 480 490
pF1KE9 QMRHSGAKPLQCEVCGFQCRQRASLKYHMTKHKAETELDFACDQCGRRFEKAHNLNVHMS
::: :: .:.::: : .:: :. .: .: ..:..::. : . .: .:.
XP_016 VRIHSGDKPYECNVCGKAFSQSSSLTVHVRSHTGEK--PYGCNECGKAFSQFSTLALHLR
210 220 230 240 250 260
500 510 520 530
pF1KE9 MVHPLTQTQDKALPLEAEPPPGPPSPSVTTEGQAVKPEPT
.
XP_016 IHTGKKPYQCSECGKAFSQKSHHIRHQKIHTH
270 280 290
>>XP_016882736 (OMIM: 601505) PREDICTED: zinc finger pro (292 aa)
initn: 527 init1: 205 opt: 330 Z-score: 203.4 bits: 46.5 E(85289): 0.00014
Smith-Waterman score: 330; 30.8% identity (56.9% similar) in 211 aa overlap (297-500:61-261)
270 280 290 300 310 320
pF1KE9 QLPSSTSDDRVKDEFSDLSEGDVLSEDENDKKQNAQSSDESFEPYPERKVSGKKSE---S
:.::...... :: : ..: .
XP_016 LTEHEHFHTREKPFECNECGKAFSQKQYVIKHQNTHTGEKLFECNECGKSFSQKENLLTH
40 50 60 70 80 90
330 340 350 360 370
pF1KE9 KEAKKSEEPRIRKKPGPKPGWKKKL-RCERE---ELPTIHKCPYQGCTAVYRGADGMKKH
.. . .:.: : : :..: : .: : : . : . : .. : ... .:
XP_016 QKIHTGEKPFECKDCGKAFIQKSNLIRHQRTHTGEKPFV--C--KECGKTFSGKSNLTEH
100 110 120 130 140
380 390 400 410 420 430
pF1KE9 IKEHHEEVRERPCPHPGCNKVFMIDRYLQRHVKLIHTEVRNYICDECGQTFKQRKHLLVH
: : . :.: :. .: .:: .: . ::: . : :.:::..:.:: :.::
XP_016 EKIH---IGEKPFKCSECGTAFGQKKYLIKH-QNIHTGEKPYECNECGKAFSQRTSLIVH
150 160 170 180 190 200
440 450 460 470 480 490
pF1KE9 QMRHSGAKPLQCEVCGFQCRQRASLKYHMTKHKAETELDFACDQCGRRFEKAHNLNVHMS
::: :: .:.::: : .:: :. .: .: ..:..::. : . .: .:.
XP_016 VRIHSGDKPYECNVCGKAFSQSSSLTVHVRSHTGEK--PYGCNECGKAFSQFSTLALHLR
210 220 230 240 250 260
500 510 520 530
pF1KE9 MVHPLTQTQDKALPLEAEPPPGPPSPSVTTEGQAVKPEPT
.
XP_016 IHTGKKPYQCSECGKAFSQKSHHIRHQKIHTH
270 280 290
539 residues in 1 query sequences
60827320 residues in 85289 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Tue Nov 8 10:21:54 2016 done: Tue Nov 8 10:21:56 2016
Total Scan time: 7.710 Total Display time: 0.040
Function used was FASTA [36.3.4 Apr, 2011]