Result of FASTA (ccds) for
pFN21AE6892
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KE6892, 361 aa
1>>>pF1KE6892 361 - 361 aa - 361 aa
Library: human.CCDS.faa
18511270 residues in 32554 sequences
Statistics: Expectation_n fit: rho(ln(x))= 5.4200+/-0.000639; mu= 16.8197+/- 0.039
mean_var=77.5532+/-15.742, 0's: 0 Z-trim(112.1): 13 B-trim: 0 in 0/49
Lambda= 0.145638
statistics sampled from 12936 (12945) to 12936 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.755), E-opt: 0.2 (0.398), width: 16
Scan time: 2.340
The best scores are: opt bits E(32554)
CCDS12153.1 FUT3 gene_id:2525|Hs108|chr19 ( 361) 2566 548.1 4.4e-156
CCDS12152.1 FUT6 gene_id:2528|Hs108|chr19 ( 359) 2160 462.8 2.1e-130
CCDS12154.1 FUT5 gene_id:2527|Hs108|chr19 ( 374) 2051 439.9 1.7e-123
CCDS7022.1 FUT7 gene_id:2529|Hs108|chr9 ( 342) 927 203.7 2e-52
CCDS5033.1 FUT9 gene_id:10690|Hs108|chr6 ( 359) 873 192.3 5.3e-49
CCDS8301.1 FUT4 gene_id:2526|Hs108|chr11 ( 530) 859 189.5 5.5e-48
>>CCDS12153.1 FUT3 gene_id:2525|Hs108|chr19 (361 aa)
initn: 2566 init1: 2566 opt: 2566 Z-score: 2915.6 bits: 548.1 E(32554): 4.4e-156
Smith-Waterman score: 2566; 99.4% identity (99.4% similar) in 361 aa overlap (1-361:1-361)
10 20 30 40 50 60
pF1KE6 MDPLGAAKPQWPWRRCLAALLFQLLVAVCFFSYLRVSRDDATGSPRAPSGSSRQDTTPTR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS12 MDPLGAAKPQWPWRRCLAALLFQLLVAVCFFSYLRVSRDDATGSPRAPSGSSRQDTTPTR
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE6 PTLLILLWTWPFHIPVALSRCSEMVPGTADCHITADRKVYPQADTVIVHHWDIMSNPKSR
::::::: :::::::::::::::::::::::::::::::::::: :::::::::::::::
CCDS12 PTLLILLRTWPFHIPVALSRCSEMVPGTADCHITADRKVYPQADMVIVHHWDIMSNPKSR
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE6 LPPSPRPQGQRWIWFNLEPPPNCQHLEALDRYFNLTMSYRSDSDIFTPYGWLEPWSGQPA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS12 LPPSPRPQGQRWIWFNLEPPPNCQHLEALDRYFNLTMSYRSDSDIFTPYGWLEPWSGQPA
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE6 HPPLNLSAKTELVAWAVSNWKPDSARVRYYQSLQAHLKVDVYGRSHKPLPKGTMMETLSR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS12 HPPLNLSAKTELVAWAVSNWKPDSARVRYYQSLQAHLKVDVYGRSHKPLPKGTMMETLSR
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE6 YKFYLAFENSLHPDYITEKLWRNALEAWAVPVVLGPSRSNYERFLPPDAFIHVDDFQSPK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS12 YKFYLAFENSLHPDYITEKLWRNALEAWAVPVVLGPSRSNYERFLPPDAFIHVDDFQSPK
250 260 270 280 290 300
310 320 330 340 350 360
pF1KE6 DLARYLQELDKDHARYLSYFRWRETLRPRSFSWALDFCKACWKLQQESRYQTVRSIAAWF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS12 DLARYLQELDKDHARYLSYFRWRETLRPRSFSWALDFCKACWKLQQESRYQTVRSIAAWF
310 320 330 340 350 360
pF1KE6 T
:
CCDS12 T
>>CCDS12152.1 FUT6 gene_id:2528|Hs108|chr19 (359 aa)
initn: 2114 init1: 1882 opt: 2160 Z-score: 2454.6 bits: 462.8 E(32554): 2.1e-130
Smith-Waterman score: 2160; 84.3% identity (91.7% similar) in 363 aa overlap (1-361:1-359)
10 20 30 40 50
pF1KE6 MDPLGAAKPQWPWRRCLAALLFQLLVAVCFFSYLRVSRDDATGSPRAPSGSSRQDTT--P
::::: ::::: :: ::..::::::.:::::::::::.:: : :.:: :.: :
CCDS12 MDPLGPAKPQWSWRCCLTTLLFQLLMAVCFFSYLRVSQDDPT---VYPNGSRFPDSTGTP
10 20 30 40 50
60 70 80 90 100 110
pF1KE6 TRPTLLILLWTWPFHIPVALSRCSEMVPGTADCHITADRKVYPQADTVIVHHWDIMSNPK
.. :::::::::. :.:: ::::::::::::.::::::::::::.::::: ..: ::.
CCDS12 AHSIPLILLWTWPFNKPIALPRCSEMVPGTADCNITADRKVYPQADAVIVHHREVMYNPS
60 70 80 90 100 110
120 130 140 150 160 170
pF1KE6 SRLPPSPRPQGQRWIWFNLEPPPNCQHLEALDRYFNLTMSYRSDSDIFTPYGWLEPWSGQ
..:: ::: ::::::::..: : .: .:.:.: :::::::::::::::::::::::::::
CCDS12 AQLPRSPRRQGQRWIWFSMESPSHCWQLKAMDGYFNLTMSYRSDSDIFTPYGWLEPWSGQ
120 130 140 150 160 170
180 190 200 210 220 230
pF1KE6 PAHPPLNLSAKTELVAWAVSNWKPDSARVRYYQSLQAHLKVDVYGRSHKPLPKGTMMETL
:::::::::::::::::::::: :.:::::::::::::::::::::::::::.:::::::
CCDS12 PAHPPLNLSAKTELVAWAVSNWGPNSARVRYYQSLQAHLKVDVYGRSHKPLPQGTMMETL
180 190 200 210 220 230
240 250 260 270 280 290
pF1KE6 SRYKFYLAFENSLHPDYITEKLWRNALEAWAVPVVLGPSRSNYERFLPPDAFIHVDDFQS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS12 SRYKFYLAFENSLHPDYITEKLWRNALEAWAVPVVLGPSRSNYERFLPPDAFIHVDDFQS
240 250 260 270 280 290
300 310 320 330 340 350
pF1KE6 PKDLARYLQELDKDHARYLSYFRWRETLRPRSFSWALDFCKACWKLQQESRYQTVRSIAA
::::::::::::::::::::::::::::::::::::: :::::::::.:::::: :.:::
CCDS12 PKDLARYLQELDKDHARYLSYFRWRETLRPRSFSWALAFCKACWKLQEESRYQT-RGIAA
300 310 320 330 340 350
360
pF1KE6 WFT
:::
CCDS12 WFT
>>CCDS12154.1 FUT5 gene_id:2527|Hs108|chr19 (374 aa)
initn: 2315 init1: 2024 opt: 2051 Z-score: 2330.6 bits: 439.9 E(32554): 1.7e-123
Smith-Waterman score: 2324; 88.2% identity (92.5% similar) in 374 aa overlap (1-361:1-374)
10 20 30 40
pF1KE6 MDPLGAAKPQWPWRRCLAALLFQLLVAVCFFSYLRVSRDDATGSPR-----------APS
::::: ::::: ::::::.::::::::::::::::::::::::::: ::.
CCDS12 MDPLGPAKPQWLWRRCLAGLLFQLLVAVCFFSYLRVSRDDATGSPRPGLMAVEPVTGAPN
10 20 30 40 50 60
50 60 70 80 90 100
pF1KE6 GSSRQDT--TPTRPTLLILLWTWPFHIPVALSRCSEMVPGTADCHITADRKVYPQADTVI
:: ::. ::..::::::::::::. :::: ::::::::.:::.:::: .::::::.::
CCDS12 GSRCQDSMATPAHPTLLILLWTWPFNTPVALPRCSEMVPGAADCNITADSSVYPQADAVI
70 80 90 100 110 120
110 120 130 140 150 160
pF1KE6 VHHWDIMSNPKSRLPPSPRPQGQRWIWFNLEPPPNCQHLEALDRYFNLTMSYRSDSDIFT
::::::: ::.. ::: ::::::::::..: : ::.:::::: ::::::::::::::::
CCDS12 VHHWDIMYNPSANLPPPTRPQGQRWIWFSMESPSNCRHLEALDGYFNLTMSYRSDSDIFT
130 140 150 160 170 180
170 180 190 200 210 220
pF1KE6 PYGWLEPWSGQPAHPPLNLSAKTELVAWAVSNWKPDSARVRYYQSLQAHLKVDVYGRSHK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS12 PYGWLEPWSGQPAHPPLNLSAKTELVAWAVSNWKPDSARVRYYQSLQAHLKVDVYGRSHK
190 200 210 220 230 240
230 240 250 260 270 280
pF1KE6 PLPKGTMMETLSRYKFYLAFENSLHPDYITEKLWRNALEAWAVPVVLGPSRSNYERFLPP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS12 PLPKGTMMETLSRYKFYLAFENSLHPDYITEKLWRNALEAWAVPVVLGPSRSNYERFLPP
250 260 270 280 290 300
290 300 310 320 330 340
pF1KE6 DAFIHVDDFQSPKDLARYLQELDKDHARYLSYFRWRETLRPRSFSWALDFCKACWKLQQE
:::::::::::::::::::::::::::::::::.:::::::::::::: :::::::::::
CCDS12 DAFIHVDDFQSPKDLARYLQELDKDHARYLSYFHWRETLRPRSFSWALAFCKACWKLQQE
310 320 330 340 350 360
350 360
pF1KE6 SRYQTVRSIAAWFT
::::::::::::::
CCDS12 SRYQTVRSIAAWFT
370
>>CCDS7022.1 FUT7 gene_id:2529|Hs108|chr9 (342 aa)
initn: 629 init1: 336 opt: 927 Z-score: 1054.8 bits: 203.7 E(32554): 2e-52
Smith-Waterman score: 927; 44.8% identity (69.8% similar) in 315 aa overlap (50-360:34-340)
20 30 40 50 60 70
pF1KE6 LLFQLLVAVCFFSYLRVSRDDATGSPRAPSGSSRQDTTPTRPTLLILLWTWPF-HIPVAL
::. . : .::. ::.: ::: : :
CCDS70 AGHGPTRRLRGLGVLAGVALLAALWLLWLLGSAPRGTPAPQPTITILVWHWPFTDQPPEL
10 20 30 40 50 60
80 90 100 110 120 130
pF1KE6 SRCSEMVPGTADCHITADRKVYPQADTVIVHHWDIMSNPKSRLPPSPRPQGQRWIWFNLE
. : : ::..:.:.. .::.:. :: .... .:.:: . ::.:: :.: ..:
CCDS70 PSDTCTRYGIARCHLSANRSLLASADAVVFHHRELQTR-RSHLPLAQRPRGQPWVWASME
70 80 90 100 110 120
140 150 160 170 180 190
pF1KE6 PPPNCQHLEALDRYFNLTMSYRSDSDIFTPYGWLEP-WSGQPAHPPLNLSAKTELVAWAV
: . . : : :: ..::: :::::.::: ::: :. :. ::: ::....::.:
CCDS70 SPSHTHGLSHLRGIFNWVLSYRRDSDIFVPYGRLEPHWG--PS-PPL--PAKSRVAAWVV
130 140 150 160 170
200 210 220 230 240 250
pF1KE6 SNWKPDSARVRYYQSLQAHLKVDVYGRSH-KPLPKGTMMETLSRYKFYLAFENSLHPDYI
::.. . :.: :..: ::.:::.::.. .:: . .. :...:.:::.:::: : :::
CCDS70 SNFQERQLRARLYRQLAPHLRVDVFGRANGRPLCASCLVPTVAQYRFYLSFENSQHRDYI
180 190 200 210 220 230
260 270 280 290 300 310
pF1KE6 TEKLWRNALEAWAVPVVLGPSRSNYERFLPPDAFIHVDDFQSPKDLARYLQELDKDHARY
:::.::::: : .::::::: :..:: :.: :::.::::: : ..:: .: ... .::
CCDS70 TEKFWRNALVAGTVPVVLGPPRATYEAFVPADAFVHVDDFGSARELAAFLTGMNE--SRY
240 250 260 270 280 290
320 330 340 350 360
pF1KE6 LSYFRWRETLRPRSFS-WALDFCKACWKLQQESRYQTVRSIAAWFT
.: ::. :: : :. : :: : . . : :. ... .::
CCDS70 QRFFAWRDRLRVRLFTDWRERFCAICDRYPHLPRSQVYEDLEGWFQA
300 310 320 330 340
>>CCDS5033.1 FUT9 gene_id:10690|Hs108|chr6 (359 aa)
initn: 769 init1: 355 opt: 873 Z-score: 993.2 bits: 192.3 E(32554): 5.3e-49
Smith-Waterman score: 873; 44.3% identity (72.0% similar) in 300 aa overlap (65-360:66-357)
40 50 60 70 80 90
pF1KE6 RVSRDDATGSPRAPSGSSRQDTTPTRPTLLILLWTWPFHIPVALSRCSEMVPGTADCHIT
::.:.::: :. :. : . ::.:
CCDS50 WIFSPMESASSVLKMKNFFSTKTDYFNETTILVWVWPFGQTFDLTSCQAMF-NIQGCHLT
40 50 60 70 80 90
100 110 120 130 140 150
pF1KE6 ADRKVYPQADTVIVHHWDIMSNPKSRLPPSPRPQGQRWIWFNLEPPPNCQHLEALDRYFN
.::..: .. .:..:: :: : . :: . :: :.:::.::: : . . .... ::
CCDS50 TDRSLYNKSHAVLIHHRDI-SWDLTNLPQQARPPFQKWIWMNLESPTHTPQKSGIEHLFN
100 110 120 130 140 150
160 170 180 190 200 210
pF1KE6 LTMSYRSDSDIFTPYGWLEPWSGQPAHPPLNLSAKTELVAWAVSNWKPDSARVRYYQSLQ
::..:: :::: .:::.: : .: ... .: .:: :.::::.:. :::.::. :.
CCDS50 LTLTYRRDSDIQVPYGFLTV-STNPF--VFEVPSKEKLVCWVVSNWNPEHARVKYYNELS
160 170 180 190 200 210
220 230 240 250 260 270
pF1KE6 AHLKVDVYGRSH-KPLPKGTMMETLSRYKFYLAFENSLHPDYITEKLWRNALEAWAVPVV
... .::.. . . ... :.: ::::.::::.: :::::::. ::. : .::::
CCDS50 KSIEIHTYGQAFGEYVNDKNLIPTISTCKFYLSFENSIHKDYITEKLY-NAFLAGSVPVV
220 230 240 250 260
280 290 300 310 320 330
pF1KE6 LGPSRSNYERFLPPDAFIHVDDFQSPKDLARYLQELDKDHARYLSYFRWRETLR---PRS
::::: ::: ..: :.::::.:..::..::.::.:.::.. ::::: ::. . ::
CCDS50 LGPSRENYENYIPADSFIHVEDYNSPSELAKYLKEVDKNNKLYLSYFNWRKDFTVNLPR-
270 280 290 300 310 320
340 350 360
pF1KE6 FSWALDFCKACWKLQQESRYQTVRSIAAWFT
: : : :: .......:..: .. ::
CCDS50 F-WESHACLACDHVKRHQEYKSVGNLEKWFWN
330 340 350
>>CCDS8301.1 FUT4 gene_id:2526|Hs108|chr11 (530 aa)
initn: 829 init1: 401 opt: 859 Z-score: 974.9 bits: 189.5 E(32554): 5.5e-48
Smith-Waterman score: 914; 44.1% identity (65.6% similar) in 349 aa overlap (57-360:184-528)
30 40 50 60 70 80
pF1KE6 AVCFFSYLRVSRDDATGSPRAPSGSSRQDTTPTRPTLLILLWTWPF----HIPVALSRCS
::.:: . .::: :: : :
CCDS83 CVLAAAGLTCTALITYACWGQLPPLPWASPTPSRP-VGVLLWWEPFGGRDSAPRPPPDC-
160 170 180 190 200 210
90 100 110 120
pF1KE6 EMVPGTADCHITADRKVYPQADTVIVHHWDIMSNPKSRLPP-------------------
.. . . :.. .:: : .:..:. :: :....: . ::
CCDS83 RLRFNISGCRLLTDRASYGEAQAVLFHHRDLVKGPPDWPPPWGIQAHTAEEVDLRVLDYE
220 230 240 250 260 270
130 140 150 160 170
pF1KE6 ------------SPRPQGQRWIWFNLEPPPNCQHLEAL-DRYFNLTMSYRSDSDIFTPYG
:::: ::::.:.:.: : . :..: . :: :.:::.:::.:.:::
CCDS83 EAAAAAEALATSSPRPPGQRWVWMNFESPSHSPGLRSLASNLFNWTLSYRADSDVFVPYG
280 290 300 310 320 330
180 190 200 210 220
pF1KE6 WLEPWSGQPAHPPLNL----SAKTELVAWAVSNWKPDSARVRYYQSLQAHLKVDVYGRSH
.: : : .:. :: .: : : ::::.::.: .::::::..:. :. :::.::.
CCDS83 YLYPRS-HPGDPPSGLAPPLSRKQGLVAWVVSHWDERQARVRYYHQLSQHVTVDVFGRGG
340 350 360 370 380 390
230 240 250 260 270 280
pF1KE6 --KPLPKGTMMETLSRYKFYLAFENSLHPDYITEKLWRNALEAWAVPVVLGPSRSNYERF
.:.:. ...:..::::::::::: : :::::::::::: : ::::::::.:.:::::
CCDS83 PGQPVPEIGLLHTVARYKFYLAFENSQHLDYITEKLWRNALLAGAVPVVLGPDRANYERF
400 410 420 430 440 450
290 300 310 320 330 340
pF1KE6 LPPDAFIHVDDFQSPKDLARYLQELDKDHARYLSYFRWRET--LRPRSFSWALDFCKACW
.: :::::::: : ..:: :: ::.. : : ::.::.. .. :: : .:..:
CCDS83 VPRGAFIHVDDFPSASSLASYLLFLDRNPAVYRRYFHWRRSYAVHITSF-WDEPWCRVCQ
460 470 480 490 500
350 360
pF1KE6 KLQQES-RYQTVRSIAAWFT
.:. . : ...:..:.::
CCDS83 AVQRAGDRPKSIRNLASWFER
510 520 530
361 residues in 1 query sequences
18511270 residues in 32554 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Tue Nov 8 03:18:11 2016 done: Tue Nov 8 03:18:12 2016
Total Scan time: 2.340 Total Display time: 0.000
Function used was FASTA [36.3.4 Apr, 2011]