Result of FASTA (ccds) for
pFN21AE6778
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KE6778, 540 aa
1>>>pF1KE6778 540 - 540 aa - 540 aa
Library: human.CCDS.faa
18511270 residues in 32554 sequences
Statistics: Expectation_n fit: rho(ln(x))= 9.1609+/-0.000963; mu= 2.7355+/- 0.058
mean_var=216.1368+/-42.891, 0's: 0 Z-trim(112.1): 5 B-trim: 10 in 1/51
Lambda= 0.087239
statistics sampled from 12939 (12942) to 12939 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.718), E-opt: 0.2 (0.398), width: 16
Scan time: 3.760
The best scores are: opt bits E(32554)
CCDS54448.1 BFSP1 gene_id:631|Hs108|chr20 ( 540) 3452 447.2 2.3e-125
CCDS13126.1 BFSP1 gene_id:631|Hs108|chr20 ( 665) 3445 446.4 5e-125
CCDS63229.1 BFSP1 gene_id:631|Hs108|chr20 ( 526) 3352 434.6 1.4e-121
>>CCDS54448.1 BFSP1 gene_id:631|Hs108|chr20 (540 aa)
initn: 3452 init1: 3452 opt: 3452 Z-score: 2364.2 bits: 447.2 E(32554): 2.3e-125
Smith-Waterman score: 3452; 100.0% identity (100.0% similar) in 540 aa overlap (1-540:1-540)
10 20 30 40 50 60
pF1KE6 MYENECECQLLLKEMLERLNKEADEALLHNLRLQLEAQFLQDDISAAKDRHKKNLLEVQT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS54 MYENECECQLLLKEMLERLNKEADEALLHNLRLQLEAQFLQDDISAAKDRHKKNLLEVQT
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE6 YISILQQIIHTTPPASIVTSGMREEKLLTEREVAALRSQLEEGREVLSHLQAQRVELQAQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS54 YISILQQIIHTTPPASIVTSGMREEKLLTEREVAALRSQLEEGREVLSHLQAQRVELQAQ
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE6 TTTLEQAIKSAHECYDDEIQLYNEQIETLRKEIEETERVLEKSSYDCRQLAVAQQTLKNE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS54 TTTLEQAIKSAHECYDDEIQLYNEQIETLRKEIEETERVLEKSSYDCRQLAVAQQTLKNE
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE6 LDRYHRIIEIEGNRLTSAFIETPIPLFTQSHGVSLSTGSGGKDLTRALQDITAAKPRQKA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS54 LDRYHRIIEIEGNRLTSAFIETPIPLFTQSHGVSLSTGSGGKDLTRALQDITAAKPRQKA
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE6 LPKNVPRRKEIITKDKTNGALEDAPLKGLEDTKLVQVVLKEESESKFESESKEVSPLTQE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS54 LPKNVPRRKEIITKDKTNGALEDAPLKGLEDTKLVQVVLKEESESKFESESKEVSPLTQE
250 260 270 280 290 300
310 320 330 340 350 360
pF1KE6 GAPEDVPDGGQISKGFGKLYRKVKEKVRSPKEPETPTELYTKERHVLVTGDANYVDPRFY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS54 GAPEDVPDGGQISKGFGKLYRKVKEKVRSPKEPETPTELYTKERHVLVTGDANYVDPRFY
310 320 330 340 350 360
370 380 390 400 410 420
pF1KE6 VSSITAKGGVAVSVAEDSVLYDGQVEPSPESPKPPLENGQVGLQEKEDGQPIDQQPIDKE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS54 VSSITAKGGVAVSVAEDSVLYDGQVEPSPESPKPPLENGQVGLQEKEDGQPIDQQPIDKE
370 380 390 400 410 420
430 440 450 460 470 480
pF1KE6 IEPDGAELEGPEEKREGEERDEESRRPCAMVTPGAEEPSIPEPPKPAADQDGAEVLGTRS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS54 IEPDGAELEGPEEKREGEERDEESRRPCAMVTPGAEEPSIPEPPKPAADQDGAEVLGTRS
430 440 450 460 470 480
490 500 510 520 530 540
pF1KE6 RSLPEKGPPKALAYKTVEVVESIEKISTESIQTYEETAVIVETMIGKTKSDKKKSGEKSS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS54 RSLPEKGPPKALAYKTVEVVESIEKISTESIQTYEETAVIVETMIGKTKSDKKKSGEKSS
490 500 510 520 530 540
>>CCDS13126.1 BFSP1 gene_id:631|Hs108|chr20 (665 aa)
initn: 3445 init1: 3445 opt: 3445 Z-score: 2358.1 bits: 446.4 E(32554): 5e-125
Smith-Waterman score: 3445; 100.0% identity (100.0% similar) in 539 aa overlap (2-540:127-665)
10 20 30
pF1KE6 MYENECECQLLLKEMLERLNKEADEALLHNL
::::::::::::::::::::::::::::::
CCDS13 QRVRDLEAERARLERQGTEAQRALDEFRSKYENECECQLLLKEMLERLNKEADEALLHNL
100 110 120 130 140 150
40 50 60 70 80 90
pF1KE6 RLQLEAQFLQDDISAAKDRHKKNLLEVQTYISILQQIIHTTPPASIVTSGMREEKLLTER
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS13 RLQLEAQFLQDDISAAKDRHKKNLLEVQTYISILQQIIHTTPPASIVTSGMREEKLLTER
160 170 180 190 200 210
100 110 120 130 140 150
pF1KE6 EVAALRSQLEEGREVLSHLQAQRVELQAQTTTLEQAIKSAHECYDDEIQLYNEQIETLRK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS13 EVAALRSQLEEGREVLSHLQAQRVELQAQTTTLEQAIKSAHECYDDEIQLYNEQIETLRK
220 230 240 250 260 270
160 170 180 190 200 210
pF1KE6 EIEETERVLEKSSYDCRQLAVAQQTLKNELDRYHRIIEIEGNRLTSAFIETPIPLFTQSH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS13 EIEETERVLEKSSYDCRQLAVAQQTLKNELDRYHRIIEIEGNRLTSAFIETPIPLFTQSH
280 290 300 310 320 330
220 230 240 250 260 270
pF1KE6 GVSLSTGSGGKDLTRALQDITAAKPRQKALPKNVPRRKEIITKDKTNGALEDAPLKGLED
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS13 GVSLSTGSGGKDLTRALQDITAAKPRQKALPKNVPRRKEIITKDKTNGALEDAPLKGLED
340 350 360 370 380 390
280 290 300 310 320 330
pF1KE6 TKLVQVVLKEESESKFESESKEVSPLTQEGAPEDVPDGGQISKGFGKLYRKVKEKVRSPK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS13 TKLVQVVLKEESESKFESESKEVSPLTQEGAPEDVPDGGQISKGFGKLYRKVKEKVRSPK
400 410 420 430 440 450
340 350 360 370 380 390
pF1KE6 EPETPTELYTKERHVLVTGDANYVDPRFYVSSITAKGGVAVSVAEDSVLYDGQVEPSPES
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS13 EPETPTELYTKERHVLVTGDANYVDPRFYVSSITAKGGVAVSVAEDSVLYDGQVEPSPES
460 470 480 490 500 510
400 410 420 430 440 450
pF1KE6 PKPPLENGQVGLQEKEDGQPIDQQPIDKEIEPDGAELEGPEEKREGEERDEESRRPCAMV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS13 PKPPLENGQVGLQEKEDGQPIDQQPIDKEIEPDGAELEGPEEKREGEERDEESRRPCAMV
520 530 540 550 560 570
460 470 480 490 500 510
pF1KE6 TPGAEEPSIPEPPKPAADQDGAEVLGTRSRSLPEKGPPKALAYKTVEVVESIEKISTESI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS13 TPGAEEPSIPEPPKPAADQDGAEVLGTRSRSLPEKGPPKALAYKTVEVVESIEKISTESI
580 590 600 610 620 630
520 530 540
pF1KE6 QTYEETAVIVETMIGKTKSDKKKSGEKSS
:::::::::::::::::::::::::::::
CCDS13 QTYEETAVIVETMIGKTKSDKKKSGEKSS
640 650 660
>>CCDS63229.1 BFSP1 gene_id:631|Hs108|chr20 (526 aa)
initn: 3352 init1: 3352 opt: 3352 Z-score: 2296.3 bits: 434.6 E(32554): 1.4e-121
Smith-Waterman score: 3352; 100.0% identity (100.0% similar) in 526 aa overlap (15-540:1-526)
10 20 30 40 50 60
pF1KE6 MYENECECQLLLKEMLERLNKEADEALLHNLRLQLEAQFLQDDISAAKDRHKKNLLEVQT
::::::::::::::::::::::::::::::::::::::::::::::
CCDS63 MLERLNKEADEALLHNLRLQLEAQFLQDDISAAKDRHKKNLLEVQT
10 20 30 40
70 80 90 100 110 120
pF1KE6 YISILQQIIHTTPPASIVTSGMREEKLLTEREVAALRSQLEEGREVLSHLQAQRVELQAQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS63 YISILQQIIHTTPPASIVTSGMREEKLLTEREVAALRSQLEEGREVLSHLQAQRVELQAQ
50 60 70 80 90 100
130 140 150 160 170 180
pF1KE6 TTTLEQAIKSAHECYDDEIQLYNEQIETLRKEIEETERVLEKSSYDCRQLAVAQQTLKNE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS63 TTTLEQAIKSAHECYDDEIQLYNEQIETLRKEIEETERVLEKSSYDCRQLAVAQQTLKNE
110 120 130 140 150 160
190 200 210 220 230 240
pF1KE6 LDRYHRIIEIEGNRLTSAFIETPIPLFTQSHGVSLSTGSGGKDLTRALQDITAAKPRQKA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS63 LDRYHRIIEIEGNRLTSAFIETPIPLFTQSHGVSLSTGSGGKDLTRALQDITAAKPRQKA
170 180 190 200 210 220
250 260 270 280 290 300
pF1KE6 LPKNVPRRKEIITKDKTNGALEDAPLKGLEDTKLVQVVLKEESESKFESESKEVSPLTQE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS63 LPKNVPRRKEIITKDKTNGALEDAPLKGLEDTKLVQVVLKEESESKFESESKEVSPLTQE
230 240 250 260 270 280
310 320 330 340 350 360
pF1KE6 GAPEDVPDGGQISKGFGKLYRKVKEKVRSPKEPETPTELYTKERHVLVTGDANYVDPRFY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS63 GAPEDVPDGGQISKGFGKLYRKVKEKVRSPKEPETPTELYTKERHVLVTGDANYVDPRFY
290 300 310 320 330 340
370 380 390 400 410 420
pF1KE6 VSSITAKGGVAVSVAEDSVLYDGQVEPSPESPKPPLENGQVGLQEKEDGQPIDQQPIDKE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS63 VSSITAKGGVAVSVAEDSVLYDGQVEPSPESPKPPLENGQVGLQEKEDGQPIDQQPIDKE
350 360 370 380 390 400
430 440 450 460 470 480
pF1KE6 IEPDGAELEGPEEKREGEERDEESRRPCAMVTPGAEEPSIPEPPKPAADQDGAEVLGTRS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS63 IEPDGAELEGPEEKREGEERDEESRRPCAMVTPGAEEPSIPEPPKPAADQDGAEVLGTRS
410 420 430 440 450 460
490 500 510 520 530 540
pF1KE6 RSLPEKGPPKALAYKTVEVVESIEKISTESIQTYEETAVIVETMIGKTKSDKKKSGEKSS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS63 RSLPEKGPPKALAYKTVEVVESIEKISTESIQTYEETAVIVETMIGKTKSDKKKSGEKSS
470 480 490 500 510 520
540 residues in 1 query sequences
18511270 residues in 32554 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Tue Nov 8 16:16:46 2016 done: Tue Nov 8 16:16:46 2016
Total Scan time: 3.760 Total Display time: 0.030
Function used was FASTA [36.3.4 Apr, 2011]