Result of FASTA (ccds) for
pFN21AE6774
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KE6774, 592 aa
1>>>pF1KE6774 592 - 592 aa - 592 aa
Library: human.CCDS.faa
18511270 residues in 32554 sequences
Statistics: Expectation_n fit: rho(ln(x))= 5.3044+/-0.000844; mu= 18.5358+/- 0.051
mean_var=64.9149+/-12.699, 0's: 0 Z-trim(106.1): 18 B-trim: 0 in 0/51
Lambda= 0.159185
statistics sampled from 8779 (8786) to 8779 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.639), E-opt: 0.2 (0.27), width: 16
Scan time: 2.770
The best scores are: opt bits E(32554)
CCDS7477.1 HPSE2 gene_id:60495|Hs108|chr10 ( 592) 3935 912.8 0
CCDS53568.1 HPSE2 gene_id:60495|Hs108|chr10 ( 548) 3579 831.0 0
CCDS53567.1 HPSE2 gene_id:60495|Hs108|chr10 ( 534) 2220 518.9 6.3e-147
CCDS53566.1 HPSE2 gene_id:60495|Hs108|chr10 ( 480) 2214 517.5 1.5e-146
CCDS3602.1 HPSE gene_id:10855|Hs108|chr4 ( 543) 978 233.7 4.7e-61
CCDS56337.1 HPSE gene_id:10855|Hs108|chr4 ( 485) 693 168.2 2.2e-41
CCDS54774.1 HPSE gene_id:10855|Hs108|chr4 ( 469) 387 97.9 3e-20
>>CCDS7477.1 HPSE2 gene_id:60495|Hs108|chr10 (592 aa)
initn: 3935 init1: 3935 opt: 3935 Z-score: 4879.1 bits: 912.8 E(32554): 0
Smith-Waterman score: 3935; 99.7% identity (100.0% similar) in 592 aa overlap (1-592:1-592)
10 20 30 40 50 60
pF1KE6 MRVLCAFPEAMPSSNSRPPACLAPGALYLALLLHLSLSSQAGDRRPLPVDRAAGLKEKTL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS74 MRVLCAFPEAMPSSNSRPPACLAPGALYLALLLHLSLSSQAGDRRPLPVDRAAGLKEKTL
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE6 ILLDVSTKNPVRTVNENFLSLQLDPSIIHDGWLDFLSSKRLVTLARGLSPAFLRFGGKRT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS74 ILLDVSTKNPVRTVNENFLSLQLDPSIIHDGWLDFLSSKRLVTLARGLSPAFLRFGGKRT
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE6 DFLQFQNLRNPAKSRGGPGPDYYLKNYEDDIVRSDVALDKQKGCKIAQHPDVMLELQREK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS74 DFLQFQNLRNPAKSRGGPGPDYYLKNYEDDIVRSDVALDKQKGCKIAQHPDVMLELQREK
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE6 AAQMHLVLLKEQFSNTYSNLILTARSLDKLYNFADCSGLHLIFALNALRRNPNNSWNSSS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS74 AAQMHLVLLKEQFSNTYSNLILTARSLDKLYNFADCSGLHLIFALNALRRNPNNSWNSSS
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE6 ALSLLKYSASKKYNISWELGNEPNNYRTMHGRAVNGSQLGKDYIQLKSLLQPIRIYSRAS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS74 ALSLLKYSASKKYNISWELGNEPNNYRTMHGRAVNGSQLGKDYIQLKSLLQPIRIYSRAS
250 260 270 280 290 300
310 320 330 340 350 360
pF1KE6 LYGPNIGRPRKNVIALLDGFMKVAGSTVDAVTWQHCYIDGRVVKVMDFLKTRLLDTLSDQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS74 LYGPNIGRPRKNVIALLDGFMKVAGSTVDAVTWQHCYIDGRVVKVMDFLKTRLLDTLSDQ
310 320 330 340 350 360
370 380 390 400 410 420
pF1KE6 IRKIQKVVNTYTPGKKIWLEGVVTTSAGGTNNLSDSYAAGFLWLNTLGMLANQGIDVVIR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS74 IRKIQKVVNTYTPGKKIWLEGVVTTSAGGTNNLSDSYAAGFLWLNTLGMLANQGIDVVIR
370 380 390 400 410 420
430 440 450 460 470 480
pF1KE6 HSFFDHGYNHLVDQNFNPLPDYWLSLLYKRLIGPKVLAVHVAGLQRKPRPGRVIRDKLRI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS74 HSFFDHGYNHLVDQNFNPLPDYWLSLLYKRLIGPKVLAVHVAGLQRKPRPGRVIRDKLRI
430 440 450 460 470 480
490 500 510 520 530 540
pF1KE6 YAHCTNHHNHNYVRGSITLFIINLHRSRKKIKLTGTLRDKLVHQYLLQPYGQEGLKSKSV
:::::::::::::::::::::::::::::::::.::::::::::::::::::::::::::
CCDS74 YAHCTNHHNHNYVRGSITLFIINLHRSRKKIKLAGTLRDKLVHQYLLQPYGQEGLKSKSV
490 500 510 520 530 540
550 560 570 580 590
pF1KE6 QLNGQPLVMVDDGTLPELKPRPLRAGRTLVIPPVTMGFFVVKNVNALACRYR
::::::::::::::::::::::::::::::::::::::.:::::::::::::
CCDS74 QLNGQPLVMVDDGTLPELKPRPLRAGRTLVIPPVTMGFYVVKNVNALACRYR
550 560 570 580 590
>>CCDS53568.1 HPSE2 gene_id:60495|Hs108|chr10 (548 aa)
initn: 3579 init1: 3579 opt: 3579 Z-score: 4437.8 bits: 831.0 E(32554): 0
Smith-Waterman score: 3579; 99.6% identity (100.0% similar) in 539 aa overlap (1-539:1-539)
10 20 30 40 50 60
pF1KE6 MRVLCAFPEAMPSSNSRPPACLAPGALYLALLLHLSLSSQAGDRRPLPVDRAAGLKEKTL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS53 MRVLCAFPEAMPSSNSRPPACLAPGALYLALLLHLSLSSQAGDRRPLPVDRAAGLKEKTL
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE6 ILLDVSTKNPVRTVNENFLSLQLDPSIIHDGWLDFLSSKRLVTLARGLSPAFLRFGGKRT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS53 ILLDVSTKNPVRTVNENFLSLQLDPSIIHDGWLDFLSSKRLVTLARGLSPAFLRFGGKRT
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE6 DFLQFQNLRNPAKSRGGPGPDYYLKNYEDDIVRSDVALDKQKGCKIAQHPDVMLELQREK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS53 DFLQFQNLRNPAKSRGGPGPDYYLKNYEDDIVRSDVALDKQKGCKIAQHPDVMLELQREK
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE6 AAQMHLVLLKEQFSNTYSNLILTARSLDKLYNFADCSGLHLIFALNALRRNPNNSWNSSS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS53 AAQMHLVLLKEQFSNTYSNLILTARSLDKLYNFADCSGLHLIFALNALRRNPNNSWNSSS
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE6 ALSLLKYSASKKYNISWELGNEPNNYRTMHGRAVNGSQLGKDYIQLKSLLQPIRIYSRAS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS53 ALSLLKYSASKKYNISWELGNEPNNYRTMHGRAVNGSQLGKDYIQLKSLLQPIRIYSRAS
250 260 270 280 290 300
310 320 330 340 350 360
pF1KE6 LYGPNIGRPRKNVIALLDGFMKVAGSTVDAVTWQHCYIDGRVVKVMDFLKTRLLDTLSDQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS53 LYGPNIGRPRKNVIALLDGFMKVAGSTVDAVTWQHCYIDGRVVKVMDFLKTRLLDTLSDQ
310 320 330 340 350 360
370 380 390 400 410 420
pF1KE6 IRKIQKVVNTYTPGKKIWLEGVVTTSAGGTNNLSDSYAAGFLWLNTLGMLANQGIDVVIR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS53 IRKIQKVVNTYTPGKKIWLEGVVTTSAGGTNNLSDSYAAGFLWLNTLGMLANQGIDVVIR
370 380 390 400 410 420
430 440 450 460 470 480
pF1KE6 HSFFDHGYNHLVDQNFNPLPDYWLSLLYKRLIGPKVLAVHVAGLQRKPRPGRVIRDKLRI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS53 HSFFDHGYNHLVDQNFNPLPDYWLSLLYKRLIGPKVLAVHVAGLQRKPRPGRVIRDKLRI
430 440 450 460 470 480
490 500 510 520 530 540
pF1KE6 YAHCTNHHNHNYVRGSITLFIINLHRSRKKIKLTGTLRDKLVHQYLLQPYGQEGLKSKSV
:::::::::::::::::::::::::::::::::.::::::::::::::::::::::::.
CCDS53 YAHCTNHHNHNYVRGSITLFIINLHRSRKKIKLAGTLRDKLVHQYLLQPYGQEGLKSKTQ
490 500 510 520 530 540
550 560 570 580 590
pF1KE6 QLNGQPLVMVDDGTLPELKPRPLRAGRTLVIPPVTMGFFVVKNVNALACRYR
CCDS53 RCQYCGII
>>CCDS53567.1 HPSE2 gene_id:60495|Hs108|chr10 (534 aa)
initn: 3539 init1: 2212 opt: 2220 Z-score: 2751.2 bits: 518.9 E(32554): 6.3e-147
Smith-Waterman score: 3427; 89.9% identity (90.2% similar) in 592 aa overlap (1-592:1-534)
10 20 30 40 50 60
pF1KE6 MRVLCAFPEAMPSSNSRPPACLAPGALYLALLLHLSLSSQAGDRRPLPVDRAAGLKEKTL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS53 MRVLCAFPEAMPSSNSRPPACLAPGALYLALLLHLSLSSQAGDRRPLPVDRAAGLKEKTL
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE6 ILLDVSTKNPVRTVNENFLSLQLDPSIIHDGWLDFLSSKRLVTLARGLSPAFLRFGGKRT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS53 ILLDVSTKNPVRTVNENFLSLQLDPSIIHDGWLDFLSSKRLVTLARGLSPAFLRFGGKRT
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE6 DFLQFQNLRNPAKSRGGPGPDYYLKNYEDDIVRSDVALDKQKGCKIAQHPDVMLELQREK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS53 DFLQFQNLRNPAKSRGGPGPDYYLKNYEDDIVRSDVALDKQKGCKIAQHPDVMLELQREK
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE6 AAQMHLVLLKEQFSNTYSNLILTARSLDKLYNFADCSGLHLIFALNALRRNPNNSWNSSS
:::::::::::::::::::::::
CCDS53 AAQMHLVLLKEQFSNTYSNLILT-------------------------------------
190 200
250 260 270 280 290 300
pF1KE6 ALSLLKYSASKKYNISWELGNEPNNYRTMHGRAVNGSQLGKDYIQLKSLLQPIRIYSRAS
:::::::::::::::::::::::::::::::::::::::
CCDS53 ---------------------EPNNYRTMHGRAVNGSQLGKDYIQLKSLLQPIRIYSRAS
210 220 230 240
310 320 330 340 350 360
pF1KE6 LYGPNIGRPRKNVIALLDGFMKVAGSTVDAVTWQHCYIDGRVVKVMDFLKTRLLDTLSDQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS53 LYGPNIGRPRKNVIALLDGFMKVAGSTVDAVTWQHCYIDGRVVKVMDFLKTRLLDTLSDQ
250 260 270 280 290 300
370 380 390 400 410 420
pF1KE6 IRKIQKVVNTYTPGKKIWLEGVVTTSAGGTNNLSDSYAAGFLWLNTLGMLANQGIDVVIR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS53 IRKIQKVVNTYTPGKKIWLEGVVTTSAGGTNNLSDSYAAGFLWLNTLGMLANQGIDVVIR
310 320 330 340 350 360
430 440 450 460 470 480
pF1KE6 HSFFDHGYNHLVDQNFNPLPDYWLSLLYKRLIGPKVLAVHVAGLQRKPRPGRVIRDKLRI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS53 HSFFDHGYNHLVDQNFNPLPDYWLSLLYKRLIGPKVLAVHVAGLQRKPRPGRVIRDKLRI
370 380 390 400 410 420
490 500 510 520 530 540
pF1KE6 YAHCTNHHNHNYVRGSITLFIINLHRSRKKIKLTGTLRDKLVHQYLLQPYGQEGLKSKSV
:::::::::::::::::::::::::::::::::.::::::::::::::::::::::::::
CCDS53 YAHCTNHHNHNYVRGSITLFIINLHRSRKKIKLAGTLRDKLVHQYLLQPYGQEGLKSKSV
430 440 450 460 470 480
550 560 570 580 590
pF1KE6 QLNGQPLVMVDDGTLPELKPRPLRAGRTLVIPPVTMGFFVVKNVNALACRYR
::::::::::::::::::::::::::::::::::::::.:::::::::::::
CCDS53 QLNGQPLVMVDDGTLPELKPRPLRAGRTLVIPPVTMGFYVVKNVNALACRYR
490 500 510 520 530
>>CCDS53566.1 HPSE2 gene_id:60495|Hs108|chr10 (480 aa)
initn: 2214 init1: 2214 opt: 2214 Z-score: 2744.5 bits: 517.5 E(32554): 1.5e-146
Smith-Waterman score: 2975; 80.7% identity (81.1% similar) in 592 aa overlap (1-592:1-480)
10 20 30 40 50 60
pF1KE6 MRVLCAFPEAMPSSNSRPPACLAPGALYLALLLHLSLSSQAGDRRPLPVDRAAGLKEKTL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS53 MRVLCAFPEAMPSSNSRPPACLAPGALYLALLLHLSLSSQAGDRRPLPVDRAAGLKEKTL
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE6 ILLDVSTKNPVRTVNENFLSLQLDPSIIHDGWLDFLSSKRLVTLARGLSPAFLRFGGKRT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS53 ILLDVSTKNPVRTVNENFLSLQLDPSIIHDGWLDFLSSKRLVTLARGLSPAFLRFGGKRT
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE6 DFLQFQNLRNPAKSRGGPGPDYYLKNYEDDIVRSDVALDKQKGCKIAQHPDVMLELQREK
:::::::::::::::::::::::::::::
CCDS53 DFLQFQNLRNPAKSRGGPGPDYYLKNYED-------------------------------
130 140
190 200 210 220 230 240
pF1KE6 AAQMHLVLLKEQFSNTYSNLILTARSLDKLYNFADCSGLHLIFALNALRRNPNNSWNSSS
CCDS53 ------------------------------------------------------------
250 260 270 280 290 300
pF1KE6 ALSLLKYSASKKYNISWELGNEPNNYRTMHGRAVNGSQLGKDYIQLKSLLQPIRIYSRAS
:::::::::::::::::::::::::::::::::::::::
CCDS53 ---------------------EPNNYRTMHGRAVNGSQLGKDYIQLKSLLQPIRIYSRAS
150 160 170 180
310 320 330 340 350 360
pF1KE6 LYGPNIGRPRKNVIALLDGFMKVAGSTVDAVTWQHCYIDGRVVKVMDFLKTRLLDTLSDQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS53 LYGPNIGRPRKNVIALLDGFMKVAGSTVDAVTWQHCYIDGRVVKVMDFLKTRLLDTLSDQ
190 200 210 220 230 240
370 380 390 400 410 420
pF1KE6 IRKIQKVVNTYTPGKKIWLEGVVTTSAGGTNNLSDSYAAGFLWLNTLGMLANQGIDVVIR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS53 IRKIQKVVNTYTPGKKIWLEGVVTTSAGGTNNLSDSYAAGFLWLNTLGMLANQGIDVVIR
250 260 270 280 290 300
430 440 450 460 470 480
pF1KE6 HSFFDHGYNHLVDQNFNPLPDYWLSLLYKRLIGPKVLAVHVAGLQRKPRPGRVIRDKLRI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS53 HSFFDHGYNHLVDQNFNPLPDYWLSLLYKRLIGPKVLAVHVAGLQRKPRPGRVIRDKLRI
310 320 330 340 350 360
490 500 510 520 530 540
pF1KE6 YAHCTNHHNHNYVRGSITLFIINLHRSRKKIKLTGTLRDKLVHQYLLQPYGQEGLKSKSV
:::::::::::::::::::::::::::::::::.::::::::::::::::::::::::::
CCDS53 YAHCTNHHNHNYVRGSITLFIINLHRSRKKIKLAGTLRDKLVHQYLLQPYGQEGLKSKSV
370 380 390 400 410 420
550 560 570 580 590
pF1KE6 QLNGQPLVMVDDGTLPELKPRPLRAGRTLVIPPVTMGFFVVKNVNALACRYR
::::::::::::::::::::::::::::::::::::::.:::::::::::::
CCDS53 QLNGQPLVMVDDGTLPELKPRPLRAGRTLVIPPVTMGFYVVKNVNALACRYR
430 440 450 460 470 480
>>CCDS3602.1 HPSE gene_id:10855|Hs108|chr4 (543 aa)
initn: 1099 init1: 605 opt: 978 Z-score: 1209.6 bits: 233.7 E(32554): 4.7e-61
Smith-Waterman score: 1503; 44.4% identity (69.2% similar) in 559 aa overlap (33-589:13-542)
10 20 30 40 50 60
pF1KE6 VLCAFPEAMPSSNSRPPACLAPGALYLALLLHLSLSSQAGDRRPLPVDRAAGLKEKTLIL
: : : . : : . : : . . ..
CCDS36 MLLRSKPALPPPLMLLLLGPLGPLSPGALPRPA--QAQDVVD
10 20 30 40
70 80 90 100 110 120
pF1KE6 LDVSTKNPVRTVNENFLSLQLDPSIIHDG-WLDFLSSKRLVTLARGLSPAFLRFGGKRTD
:: :..:.. :. .:::. .: .. : .: .:.: .: :::::::::.::::: .::
CCDS36 LDFFTQEPLHLVSPSFLSVTIDANLATDPRFLILLGSPKLRTLARGLSPAYLRFGGTKTD
50 60 70 80 90 100
130 140 150 160 170 180
pF1KE6 FLQFQNLRNPAKSRGGPGPDYYLKNYEDDIVRSDVALDKQKGCKIAQ-HPDVMLELQREK
:: : .: : . ..: .. : .:. :: .. ::: .:. :
CCDS36 FLIF----DPKKES-----TFEERSYWQSQVNQDI-------CKYGSIPPDVEEKLRLEW
110 120 130 140
190 200 210 220 230 240
pF1KE6 AAQMHLVLLKEQFSNTYSNLILTARSLDKLYNFADCSGLHLIFALNALRRNPNNSWNSSS
: .: ::.:.... ..: . :.: ::.::.:::: :::.:::: :. . .::::.
CCDS36 PYQEQL-LLREHYQKKFKNSTYSRSSVDVLYTFANCSGLDLIFGLNALLRTADLQWNSSN
150 160 170 180 190 200
250 260 270 280 290 300
pF1KE6 ALSLLKYSASKKYNISWELGNEPNNYRTMHGRAVNGSQLGKDYIQLKSLLQPIRIYSRAS
: :: : .:: ::::::::::::.. .::::::.:.:::..::. .. :.
CCDS36 AQLLLDYCSSKGYNISWELGNEPNSFLKKADIFINGSQLGEDFIQLHKLLRK-STFKNAK
210 220 230 240 250 260
310 320 330 340 350 360
pF1KE6 LYGPNIGRPRKNVIALLDGFMKVAGSTVDAVTWQHCYIDGRVVKVMDFLKTRLLDTLSDQ
::::..:.::... .: .:.:..: ..:.:::.: :..::.. :::. .:: . ..
CCDS36 LYGPDVGQPRRKTAKMLKSFLKAGGEVIDSVTWHHYYLNGRTATKEDFLNPDVLDIFISS
270 280 290 300 310 320
370 380 390 400 410 420
pF1KE6 IRKIQKVVNTYTPGKKIWLEGVVTTSAGGTNNLSDSYAAGFLWLNTLGMLANQGIDVVIR
..:. .::.. ::::.:: . .. .::. :::..::::.::. ::. : .::.::.:
CCDS36 VQKVFQVVESTRPGKKVWLGETSSAYGGGAPLLSDTFAAGFMWLDKLGLSARMGIEVVMR
330 340 350 360 370 380
430 440 450 460 470 480
pF1KE6 HSFFDHGYNHLVDQNFNPLPDYWLSLLYKRLIGPKVLAVHVAGLQRKPRPGRVIRDKLRI
. :: : ::::.::.::::::::::.:.:.: ::: . : : .:. :::.
CCDS36 QVFFGAGNYHLVDENFDPLPDYWLSLLFKKLVGTKVLMASVQGSKRR---------KLRV
390 400 410 420 430
490 500 510 520 530 540
pF1KE6 YAHCTNHHNHNYVRGSITLFIINLHRSRKKIKLTGTLRDKLVHQYLLQPYGQEGLKSKSV
: :::: : : .:..::. :::: : ..: . .: : .:::.: : .:: ::::
CCDS36 YLHCTNTDNPRYKEGDLTLYAINLHNVTKYLRLPYPFSNKQVDKYLLRPLGPHGLLSKSV
440 450 460 470 480 490
550 560 570 580 590
pF1KE6 QLNGQPLVMVDDGTLPELKPRPLRAGRTLVIPPVTMGFFVVKNVNALACRYR
:::: : :::: ::: : .::: : .: .: ...:::..:... ::
CCDS36 QLNGLTLKMVDDQTLPPLMEKPLRPGSSLGLPAFSYSFFVIRNAKVAACI
500 510 520 530 540
>>CCDS56337.1 HPSE gene_id:10855|Hs108|chr4 (485 aa)
initn: 798 init1: 605 opt: 693 Z-score: 856.6 bits: 168.2 E(32554): 2.2e-41
Smith-Waterman score: 1146; 38.6% identity (62.3% similar) in 559 aa overlap (33-589:13-484)
10 20 30 40 50 60
pF1KE6 VLCAFPEAMPSSNSRPPACLAPGALYLALLLHLSLSSQAGDRRPLPVDRAAGLKEKTLIL
: : : . : : . : : . . ..
CCDS56 MLLRSKPALPPPLMLLLLGPLGPLSPGALPRPA--QAQDVVD
10 20 30 40
70 80 90 100 110 120
pF1KE6 LDVSTKNPVRTVNENFLSLQLDPSIIHDG-WLDFLSSKRLVTLARGLSPAFLRFGGKRTD
:: :..:.. :. .:::. .: .. : .: .:.: .: :::::::::.::::: .::
CCDS56 LDFFTQEPLHLVSPSFLSVTIDANLATDPRFLILLGSPKLRTLARGLSPAYLRFGGTKTD
50 60 70 80 90 100
130 140 150 160 170 180
pF1KE6 FLQFQNLRNPAKSRGGPGPDYYLKNYEDDIVRSDVALDKQKGCKIAQ-HPDVMLELQREK
:: : .: : . ..: .. : .:. :: .. ::: .:. :
CCDS56 FLIF----DPKKES-----TFEERSYWQSQVNQDI-------CKYGSIPPDVEEKLRLEW
110 120 130 140
190 200 210 220 230 240
pF1KE6 AAQMHLVLLKEQFSNTYSNLILTARSLDKLYNFADCSGLHLIFALNALRRNPNNSWNSSS
: .: ::.:.... ..: . :. .::
CCDS56 PYQEQL-LLREHYQKKFKN---------STYS------------------KPN-------
150 160
250 260 270 280 290 300
pF1KE6 ALSLLKYSASKKYNISWELGNEPNNYRTMHGRAVNGSQLGKDYIQLKSLLQPIRIYSRAS
:.:: : .: .::::::.:.:::..::. .. :.
CCDS56 --SFLK-----KADIF-----------------INGSQLGEDFIQLHKLLRK-STFKNAK
170 180 190 200
310 320 330 340 350 360
pF1KE6 LYGPNIGRPRKNVIALLDGFMKVAGSTVDAVTWQHCYIDGRVVKVMDFLKTRLLDTLSDQ
::::..:.::... .: .:.:..: ..:.:::.: :..::.. :::. .:: . ..
CCDS56 LYGPDVGQPRRKTAKMLKSFLKAGGEVIDSVTWHHYYLNGRTATKEDFLNPDVLDIFISS
210 220 230 240 250 260
370 380 390 400 410 420
pF1KE6 IRKIQKVVNTYTPGKKIWLEGVVTTSAGGTNNLSDSYAAGFLWLNTLGMLANQGIDVVIR
..:. .::.. ::::.:: . .. .::. :::..::::.::. ::. : .::.::.:
CCDS56 VQKVFQVVESTRPGKKVWLGETSSAYGGGAPLLSDTFAAGFMWLDKLGLSARMGIEVVMR
270 280 290 300 310 320
430 440 450 460 470 480
pF1KE6 HSFFDHGYNHLVDQNFNPLPDYWLSLLYKRLIGPKVLAVHVAGLQRKPRPGRVIRDKLRI
. :: : ::::.::.::::::::::.:.:.: ::: . : : .:. :::.
CCDS56 QVFFGAGNYHLVDENFDPLPDYWLSLLFKKLVGTKVLMASVQGSKRR---------KLRV
330 340 350 360 370
490 500 510 520 530 540
pF1KE6 YAHCTNHHNHNYVRGSITLFIINLHRSRKKIKLTGTLRDKLVHQYLLQPYGQEGLKSKSV
: :::: : : .:..::. :::: : ..: . .: : .:::.: : .:: ::::
CCDS56 YLHCTNTDNPRYKEGDLTLYAINLHNVTKYLRLPYPFSNKQVDKYLLRPLGPHGLLSKSV
380 390 400 410 420 430
550 560 570 580 590
pF1KE6 QLNGQPLVMVDDGTLPELKPRPLRAGRTLVIPPVTMGFFVVKNVNALACRYR
:::: : :::: ::: : .::: : .: .: ...:::..:... ::
CCDS56 QLNGLTLKMVDDQTLPPLMEKPLRPGSSLGLPAFSYSFFVIRNAKVAACI
440 450 460 470 480
>>CCDS54774.1 HPSE gene_id:10855|Hs108|chr4 (469 aa)
initn: 1071 init1: 377 opt: 387 Z-score: 477.0 bits: 97.9 E(32554): 3e-20
Smith-Waterman score: 1073; 37.9% identity (58.9% similar) in 559 aa overlap (33-589:13-468)
10 20 30 40 50 60
pF1KE6 VLCAFPEAMPSSNSRPPACLAPGALYLALLLHLSLSSQAGDRRPLPVDRAAGLKEKTLIL
: : : . : : . : : . . ..
CCDS54 MLLRSKPALPPPLMLLLLGPLGPLSPGALPRPA--QAQDVVD
10 20 30 40
70 80 90 100 110 120
pF1KE6 LDVSTKNPVRTVNENFLSLQLDPSIIHDG-WLDFLSSKRLVTLARGLSPAFLRFGGKRTD
:: :..:.. :. .:::. .: .. : .: .:.: .: :::::::::.::::: .::
CCDS54 LDFFTQEPLHLVSPSFLSVTIDANLATDPRFLILLGSPKLRTLARGLSPAYLRFGGTKTD
50 60 70 80 90 100
130 140 150 160 170 180
pF1KE6 FLQFQNLRNPAKSRGGPGPDYYLKNYEDDIVRSDVALDKQKGCKIAQ-HPDVMLELQREK
:: : .: : . ..: .. : .:. :: .. ::: .:. :
CCDS54 FLIF----DPKKES-----TFEERSYWQSQVNQDI-------CKYGSIPPDVEEKLRLEW
110 120 130 140
190 200 210 220 230 240
pF1KE6 AAQMHLVLLKEQFSNTYSNLILTARSLDKLYNFADCSGLHLIFALNALRRNPNNSWNSSS
: .: ::.:.... ..: . :.: ::.::.:::: :::.:::: :. . .::::.
CCDS54 PYQEQL-LLREHYQKKFKNSTYSRSSVDVLYTFANCSGLDLIFGLNALLRTADLQWNSSN
150 160 170 180 190 200
250 260 270 280 290 300
pF1KE6 ALSLLKYSASKKYNISWELGNEPNNYRTMHGRAVNGSQLGKDYIQLKSLLQPIRIYSRAS
: :: : .:: ::::::::::::.. .::::::.:.:::..::. .. :.
CCDS54 AQLLLDYCSSKGYNISWELGNEPNSFLKKADIFINGSQLGEDFIQLHKLLRK-STFKNAK
210 220 230 240 250 260
310 320 330 340 350 360
pF1KE6 LYGPNIGRPRKNVIALLDGFMKVAGSTVDAVTWQHCYIDGRVVKVMDFLKTRLLDTLSDQ
::::..:.::... .: .:.:..: ..:.:::.: :..::.. :::. .:: .
CCDS54 LYGPDVGQPRRKTAKMLKSFLKAGGEVIDSVTWHHYYLNGRTATKEDFLNPDVLDIF---
270 280 290 300 310
370 380 390 400 410 420
pF1KE6 IRKIQKVVNTYTPGKKIWLEGVVTTSAGGTNNLSDSYAAGFLWLNTLGMLANQGIDVVIR
: ..:::
CCDS54 ISSVQKV-----------------------------------------------------
320
430 440 450 460 470 480
pF1KE6 HSFFDHGYNHLVDQNFNPLPDYWLSLLYKRLIGPKVLAVHVAGLQRKPRPGRVIRDKLRI
. :::::::.:.:.: ::: . : : .:. :::.
CCDS54 ------------------FQDYWLSLLFKKLVGTKVLMASVQGSKRR---------KLRV
330 340 350
490 500 510 520 530 540
pF1KE6 YAHCTNHHNHNYVRGSITLFIINLHRSRKKIKLTGTLRDKLVHQYLLQPYGQEGLKSKSV
: :::: : : .:..::. :::: : ..: . .: : .:::.: : .:: ::::
CCDS54 YLHCTNTDNPRYKEGDLTLYAINLHNVTKYLRLPYPFSNKQVDKYLLRPLGPHGLLSKSV
360 370 380 390 400 410
550 560 570 580 590
pF1KE6 QLNGQPLVMVDDGTLPELKPRPLRAGRTLVIPPVTMGFFVVKNVNALACRYR
:::: : :::: ::: : .::: : .: .: ...:::..:... ::
CCDS54 QLNGLTLKMVDDQTLPPLMEKPLRPGSSLGLPAFSYSFFVIRNAKVAACI
420 430 440 450 460
592 residues in 1 query sequences
18511270 residues in 32554 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Tue Nov 8 16:15:20 2016 done: Tue Nov 8 16:15:20 2016
Total Scan time: 2.770 Total Display time: 0.100
Function used was FASTA [36.3.4 Apr, 2011]