FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448

Query: pF1KE6760, 532 aa
  1>>>pF1KE6760 532 - 532 aa - 532 aa
Library: human.CCDS.faa
  18511270 residues in 32554 sequences

Statistics:  Expectation_n fit: rho(ln(x))= 5.5661+/-0.000887; mu= 17.3827+/- 0.053
 mean_var=69.1083+/-14.226, 0's: 0 Z-trim(106.2): 14  B-trim: 11 in 1/47
 Lambda= 0.154280
 statistics sampled from 8815 (8824) to 8815 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
 ktup: 2, E-join: 1 (0.639), E-opt: 0.2 (0.271), width:  16
 Scan time:  2.380

The best scores are:                                      opt bits E(32554)
CCDS14375.1 FAAH2 gene_id:158584|Hs108|chrX        ( 532) 3579 805.8       0
CCDS535.1 FAAH gene_id:2166|Hs108|chr1             ( 579)  382 94.2 4.3e-19


>>CCDS14375.1 FAAH2 gene_id:158584|Hs108|chrX             (532 aa)
 initn: 3579 init1: 3579 opt: 3579  Z-score: 4302.5  bits: 805.8 E(32554):    0
Smith-Waterman score: 3579; 100.0% identity (100.0% similar) in 532 aa overlap (1-532:1-532)

               10        20        30        40        50        60
pF1KE6 MAPSFTARIQLFLLRALGFLIGLVGRAALVLGGPKFASKTPRPVTEPLLLLSGMQLAKLI
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS14 MAPSFTARIQLFLLRALGFLIGLVGRAALVLGGPKFASKTPRPVTEPLLLLSGMQLAKLI
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KE6 RQRKVKCIDVVQAYINRIKDVNPMINGIVKYRFEEAMKEAHAVDQKLAEKQEDEATLENK
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS14 RQRKVKCIDVVQAYINRIKDVNPMINGIVKYRFEEAMKEAHAVDQKLAEKQEDEATLENK
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KE6 WPFLGVPLTVKEAFQLQGMPNSSGLMNRRDAIAKTDATVVALLKGAGAIPLGITNCSELC
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS14 WPFLGVPLTVKEAFQLQGMPNSSGLMNRRDAIAKTDATVVALLKGAGAIPLGITNCSELC
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KE6 MWYESSNKIYGRSNNPYDLQHIVGGSSGGEGCTLAAACSVIGVGSDIGGSIRMPAFFNGI
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS14 MWYESSNKIYGRSNNPYDLQHIVGGSSGGEGCTLAAACSVIGVGSDIGGSIRMPAFFNGI
              190       200       210       220       230       240

              250       260       270       280       290       300
pF1KE6 FGHKPSPGVVPNKGQFPLAVGAQELFLCTGPMCRYAEDLAPMLKVMAGPGIKRLKLDTKV
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS14 FGHKPSPGVVPNKGQFPLAVGAQELFLCTGPMCRYAEDLAPMLKVMAGPGIKRLKLDTKV
              250       260       270       280       290       300

              310       320       330       340       350       360
pF1KE6 HLKDLKFYWMEHDGGSFLMSKVDQDLIMTQKKVVVHLETILGASVQHVKLKKMKYSFQLW
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS14 HLKDLKFYWMEHDGGSFLMSKVDQDLIMTQKKVVVHLETILGASVQHVKLKKMKYSFQLW
              310       320       330       340       350       360

              370       380       390       400       410       420
pF1KE6 IAMMSAKGHDGKEPVKFVDLLGDHGKHVSPLWELIKWCLGLSVYTIPSIGLALLEEKLRY
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS14 IAMMSAKGHDGKEPVKFVDLLGDHGKHVSPLWELIKWCLGLSVYTIPSIGLALLEEKLRY
              370       380       390       400       410       420

              430       440       450       460       470       480
pF1KE6 SNEKYQKFKAVEESLRKELVDMLGDDGVFLYPSHPTVAPKHHVPLTRPFNFAYTGVFSAL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS14 SNEKYQKFKAVEESLRKELVDMLGDDGVFLYPSHPTVAPKHHVPLTRPFNFAYTGVFSAL
              430       440       450       460       470       480

              490       500       510       520       530  
pF1KE6 GLPVTQCPLGLNAKGLPLGIQVVAGPFNDHLTLAVAQYLEKTFGGWVCPGKF
       ::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS14 GLPVTQCPLGLNAKGLPLGIQVVAGPFNDHLTLAVAQYLEKTFGGWVCPGKF
              490       500       510       520       530  

>>CCDS535.1 FAAH gene_id:2166|Hs108|chr1                  (579 aa)
 initn: 423 init1: 375 opt: 382  Z-score: 456.2  bits: 94.2 E(32554): 4.3e-19
Smith-Waterman score: 443; 26.1% identity (53.4% similar) in 513 aa overlap (35-524:61-544)

           10        20        30        40        50        60    
pF1KE6 FTARIQLFLLRALGFLIGLVGRAALVLGGPKFASKTPRPVTEPLLLLSGMQLAKLIRQRK
                                     .:  ..:   .: :: :   ::.. ...:.
CCDS53 WSGRRTARGAVVRARQRQRAGLENMDRAAQRFRLQNPDLDSEALLALPLPQLVQKLHSRE
               40        50        60        70        80        90

           70        80        90       100       110       120    
pF1KE6 VKCIDVVQAYINRIKDVNPMINGIVKYRFEEAMKEAHAVDQKLAEKQEDEATLENKWPFL
       .    :. .:...  .::   : ...:  .   . ..:  : :               . 
CCDS53 LAPEAVLFTYVGKAWEVNKGTNCVTSYLADCETQLSQAPRQGL---------------LY
              100       110       120       130                    

          130       140       150       160       170       180    
pF1KE6 GVPLTVKEAFQLQGMPNSSGLMNRRDAIAKTDATVVALLKGAGAIPLGITNCSELCMWYE
       :::...:: :  .:. .. ::   . . :. :..:: .::  ::.:.  ::  .  . :.
CCDS53 GVPVSLKECFTYKGQDSTLGLSLNEGVPAECDSVVVHVLKLQGAVPFVHTNVPQSMFSYD
         140       150       160       170       180       190     

          190       200       210       220       230       240    
pF1KE6 SSNKIYGRSNNPYDLQHIVGGSSGGEGCTLAAACSVIGVGSDIGGSIRMPAFFNGIFGHK
        :: ..:.. ::.  ..  ::::::::  .... : .:.:.:::::::.:. : :: : :
CCDS53 CSNPLFGQTVNPWKSSKSPGGSSGGEGALIGSGGSPLGLGTDIGGSIRFPSSFCGICGLK
         200       210       220       230       240       250     

          250       260       270       280              290       
pF1KE6 PSPGVVPNKGQFPLAVGAQELFLCTGPMCRYAEDLAPMLKVMA-------GPGIKRLKLD
       :. . . ..:    . : . . : .::: : .:.::  :...         : .  : . 
CCDS53 PTGNRLSKSGLKGCVYGQEAVRLSVGPMARDVESLALCLRALLCEDMFRLDPTVPPLPFR
         260       270       280       290       300       310     

       300         310       320       330       340          350  
pF1KE6 TKVHL--KDLKFYWMEHDGGSFLMSKVDQDLIMTQKKVVVHLETI---LGASVQHVKLKK
        .:.   . :.  ..: :. ..    . . .. :.... .  .:.   : ... :. :. 
CCDS53 EEVYTSSQPLRVGYYETDNYTMPSPAMRRAVLETKQSLEAAGHTLVPFLPSNIPHA-LET
         320       330       340       350       360       370     

            360       370          380       390       400         
pF1KE6 MKYSFQLWIAMMSAKGHDGKEPVK--FVD-LLGDHGKHVSPLWELIKWCLGLSVYTI---
       .. .     ...:  ::   .  :  :::  :::    :: : .: .:  :: .. .   
CCDS53 LSTG-----GLFSDGGHTFLQNFKGDFVDPCLGDL---VSIL-KLPQWLKGLLAFLVKPL
               380       390       400           410       420     

         410       420       430       440         450       460   
pF1KE6 -PSIGLALLEEKLRYSNEKYQKFKAVEESLRKELVDMLG--DDGVFLYPSHPTVAPKH--
        : ..  : . : : :  :  ...   :  :: .. .    :  : :    : .::    
CCDS53 LPRLSAFLSNMKSR-SAGKLWELQHEIEVYRKTVIAQWRALDLDVVLT---PMLAPALDL
         430        440       450       460       470          480 

             470       480       490       500       510       520 
pF1KE6 HVPLTRPFNFAYTGVFSALGLPVTQCPLGLNAKGLPLGIQVVAGPFNDHLTLAVAQYLEK
       ..:       .:: ... : .:.   :.   .      ..   : :.:     . . ..:
CCDS53 NAPGRATGAVSYTMLYNCLDFPAGVVPVTTVTAEDEAQMEHYRGYFGDIWDKMLQKGMKK
             490       500       510       520       530       540 

             530                             
pF1KE6 TFGGWVCPGKF                           
       . :                                   
CCDS53 SVGLPVAVQCVALPWQEELCLRFMREVERLMTPEKQSS
             550       560       570         




532 residues in 1 query   sequences
18511270 residues in 32554 library sequences
 Tcomplib [36.3.4 Apr, 2011] (8 proc)
 start: Tue Nov  8 16:07:09 2016 done: Tue Nov  8 16:07:10 2016
 Total Scan time:  2.380 Total Display time:  0.010

Function used was FASTA [36.3.4 Apr, 2011]