Result of FASTA (omim) for
pFN21AE6726
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KE6726, 698 aa
1>>>pF1KE6726 698 - 698 aa - 698 aa
Library: /omim/omim.rfq.tfa
60827320 residues in 85289 sequences
Statistics: Expectation_n fit: rho(ln(x))= 9.2032+/-0.00042; mu= 3.1352+/- 0.026
mean_var=291.9187+/-59.263, 0's: 0 Z-trim(119.3): 21 B-trim: 43 in 1/57
Lambda= 0.075066
statistics sampled from 33064 (33085) to 33064 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.724), E-opt: 0.2 (0.388), width: 16
Scan time: 9.550
The best scores are: opt bits E(85289)
NP_001003722 (OMIM: 253310,603371,611890) nucleopo ( 698) 4630 515.6 2.5e-145
XP_006717123 (OMIM: 253310,603371,611890) PREDICTE ( 701) 4387 489.3 2.1e-137
NP_001490 (OMIM: 253310,603371,611890) nucleoporin ( 659) 4346 484.9 4.3e-136
XP_011516853 (OMIM: 253310,603371,611890) PREDICTE ( 707) 2857 323.6 1.6e-87
XP_011516851 (OMIM: 253310,603371,611890) PREDICTE ( 710) 2614 297.3 1.3e-79
XP_011516852 (OMIM: 253310,603371,611890) PREDICTE ( 710) 2614 297.3 1.3e-79
XP_006717122 (OMIM: 253310,603371,611890) PREDICTE ( 710) 2614 297.3 1.3e-79
>>NP_001003722 (OMIM: 253310,603371,611890) nucleoporin (698 aa)
initn: 4630 init1: 4630 opt: 4630 Z-score: 2730.2 bits: 515.6 E(85289): 2.5e-145
Smith-Waterman score: 4630; 99.7% identity (99.9% similar) in 698 aa overlap (1-698:1-698)
10 20 30 40 50 60
pF1KE6 MPSEGRCWETLKALRSSDKGRLCYYRDWLLRREDVLEECMSLPKLSSYSGWVVEHVLPHM
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MPSEGRCWETLKALRSSDKGRLCYYRDWLLRREDVLEECMSLPKLSSYSGWVVEHVLPHM
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE6 QENQPLSETSPSSTSASALDQPSFVPKSPDASSAFSPASPATPNGTKGKDESQHTESMVL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 QENQPLSETSPSSTSASALDQPSFVPKSPDASSAFSPASPATPNGTKGKDESQHTESMVL
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE6 QSSRGIKVEDCVRMYELVHRMKGTEGLRLWQEEQERKVQALSEMASEQLKRFDEWKELKQ
::::::::: ::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 QSSRGIKVEGCVRMYELVHRMKGTEGLRLWQEEQERKVQALSEMASEQLKRFDEWKELKQ
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE6 HKEFQDLREVMEKSSREALGHQEKLKAEHRHRAKILNLKLREAEQQRVKQAEQERLRKEE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 HKEFQDLREVMEKSSREALGHQEKLKAEHRHRAKILNLKLREAEQQRVKQAEQERLRKEE
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE6 GQIRLRALYALQEEMLQLSQQLDASEQHKALLKVDLAAFQTRGNQLCSLISGIIRASSES
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 GQIRLRALYALQEEMLQLSQQLDASEQHKALLKVDLAAFQTRGNQLCSLISGIIRASSES
250 260 270 280 290 300
310 320 330 340 350 360
pF1KE6 SYPTAESQAEAERALREMRDLLMNLGQEITRACEDKRRQDEEEAQVKLQEAQMQQGPEAH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 SYPTAESQAEAERALREMRDLLMNLGQEITRACEDKRRQDEEEAQVKLQEAQMQQGPEAH
310 320 330 340 350 360
370 380 390 400 410 420
pF1KE6 KEPPAPSQGPGGKQNEDLQVKVQDITMQWYQQLQDASMQCVLTFEGLTNSKDSQAKKIKM
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 KEPPAPSQGPGGKQNEDLQVKVQDITMQWYQQLQDASMQCVLTFEGLTNSKDSQAKKIKM
370 380 390 400 410 420
430 440 450 460 470 480
pF1KE6 DLQKAATIPVSQISTIAGSKLKEIFDKIHSLLSGKPVQSGGRSVSVTLNPQGLDFVQYKL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 DLQKAATIPVSQISTIAGSKLKEIFDKIHSLLSGKPVQSGGRSVSVTLNPQGLDFVQYKL
430 440 450 460 470 480
490 500 510 520 530 540
pF1KE6 AEKFVKQGEEEVASHHEAAFPIAVVASGIWELHPRVGDLILAHLHKKCPYSVPFYPTFKE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 AEKFVKQGEEEVASHHEAAFPIAVVASGIWELHPRVGDLILAHLHKKCPYSVPFYPTFKE
490 500 510 520 530 540
550 560 570 580 590 600
pF1KE6 GMALEDYQRMLGYQVKDSKVEQQDNFLKRMSGMIRLYAAIIQLRWPYGNQQEIHPHGLNH
:::::::::::::::::::::::::::::::::::::::::::::::::.::::::::::
NP_001 GMALEDYQRMLGYQVKDSKVEQQDNFLKRMSGMIRLYAAIIQLRWPYGNRQEIHPHGLNH
550 560 570 580 590 600
610 620 630 640 650 660
pF1KE6 GWRWLAQILNMEPLSDVTATLLFDFLEVCGNALMKQYQVQFWKMLILIKEDYFPRIEAIT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 GWRWLAQILNMEPLSDVTATLLFDFLEVCGNALMKQYQVQFWKMLILIKEDYFPRIEAIT
610 620 630 640 650 660
670 680 690
pF1KE6 SSGQMGSFIRLKQFLEKCLQHKDIPVPKGFLTSSFWRS
::::::::::::::::::::::::::::::::::::::
NP_001 SSGQMGSFIRLKQFLEKCLQHKDIPVPKGFLTSSFWRS
670 680 690
>>XP_006717123 (OMIM: 253310,603371,611890) PREDICTED: n (701 aa)
initn: 4387 init1: 4387 opt: 4387 Z-score: 2587.9 bits: 489.3 E(85289): 2.1e-137
Smith-Waterman score: 4387; 99.7% identity (99.8% similar) in 665 aa overlap (34-698:37-701)
10 20 30 40 50 60
pF1KE6 EGRCWETLKALRSSDKGRLCYYRDWLLRREDVLEECMSLPKLSSYSGWVVEHVLPHMQEN
::::::::::::::::::::::::::::::
XP_006 LCEAEAGRVLEASSSWEPGLVSHTCNPSTLDVLEECMSLPKLSSYSGWVVEHVLPHMQEN
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE6 QPLSETSPSSTSASALDQPSFVPKSPDASSAFSPASPATPNGTKGKDESQHTESMVLQSS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 QPLSETSPSSTSASALDQPSFVPKSPDASSAFSPASPATPNGTKGKDESQHTESMVLQSS
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE6 RGIKVEDCVRMYELVHRMKGTEGLRLWQEEQERKVQALSEMASEQLKRFDEWKELKQHKE
:::::: :::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 RGIKVEGCVRMYELVHRMKGTEGLRLWQEEQERKVQALSEMASEQLKRFDEWKELKQHKE
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE6 FQDLREVMEKSSREALGHQEKLKAEHRHRAKILNLKLREAEQQRVKQAEQERLRKEEGQI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 FQDLREVMEKSSREALGHQEKLKAEHRHRAKILNLKLREAEQQRVKQAEQERLRKEEGQI
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE6 RLRALYALQEEMLQLSQQLDASEQHKALLKVDLAAFQTRGNQLCSLISGIIRASSESSYP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 RLRALYALQEEMLQLSQQLDASEQHKALLKVDLAAFQTRGNQLCSLISGIIRASSESSYP
250 260 270 280 290 300
310 320 330 340 350 360
pF1KE6 TAESQAEAERALREMRDLLMNLGQEITRACEDKRRQDEEEAQVKLQEAQMQQGPEAHKEP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 TAESQAEAERALREMRDLLMNLGQEITRACEDKRRQDEEEAQVKLQEAQMQQGPEAHKEP
310 320 330 340 350 360
370 380 390 400 410 420
pF1KE6 PAPSQGPGGKQNEDLQVKVQDITMQWYQQLQDASMQCVLTFEGLTNSKDSQAKKIKMDLQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 PAPSQGPGGKQNEDLQVKVQDITMQWYQQLQDASMQCVLTFEGLTNSKDSQAKKIKMDLQ
370 380 390 400 410 420
430 440 450 460 470 480
pF1KE6 KAATIPVSQISTIAGSKLKEIFDKIHSLLSGKPVQSGGRSVSVTLNPQGLDFVQYKLAEK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 KAATIPVSQISTIAGSKLKEIFDKIHSLLSGKPVQSGGRSVSVTLNPQGLDFVQYKLAEK
430 440 450 460 470 480
490 500 510 520 530 540
pF1KE6 FVKQGEEEVASHHEAAFPIAVVASGIWELHPRVGDLILAHLHKKCPYSVPFYPTFKEGMA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 FVKQGEEEVASHHEAAFPIAVVASGIWELHPRVGDLILAHLHKKCPYSVPFYPTFKEGMA
490 500 510 520 530 540
550 560 570 580 590 600
pF1KE6 LEDYQRMLGYQVKDSKVEQQDNFLKRMSGMIRLYAAIIQLRWPYGNQQEIHPHGLNHGWR
::::::::::::::::::::::::::::::::::::::::::::::.:::::::::::::
XP_006 LEDYQRMLGYQVKDSKVEQQDNFLKRMSGMIRLYAAIIQLRWPYGNRQEIHPHGLNHGWR
550 560 570 580 590 600
610 620 630 640 650 660
pF1KE6 WLAQILNMEPLSDVTATLLFDFLEVCGNALMKQYQVQFWKMLILIKEDYFPRIEAITSSG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 WLAQILNMEPLSDVTATLLFDFLEVCGNALMKQYQVQFWKMLILIKEDYFPRIEAITSSG
610 620 630 640 650 660
670 680 690
pF1KE6 QMGSFIRLKQFLEKCLQHKDIPVPKGFLTSSFWRS
:::::::::::::::::::::::::::::::::::
XP_006 QMGSFIRLKQFLEKCLQHKDIPVPKGFLTSSFWRS
670 680 690 700
>>NP_001490 (OMIM: 253310,603371,611890) nucleoporin GLE (659 aa)
initn: 4424 init1: 4346 opt: 4346 Z-score: 2564.2 bits: 484.9 E(85289): 4.3e-136
Smith-Waterman score: 4346; 99.4% identity (99.7% similar) in 658 aa overlap (1-658:1-658)
10 20 30 40 50 60
pF1KE6 MPSEGRCWETLKALRSSDKGRLCYYRDWLLRREDVLEECMSLPKLSSYSGWVVEHVLPHM
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MPSEGRCWETLKALRSSDKGRLCYYRDWLLRREDVLEECMSLPKLSSYSGWVVEHVLPHM
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE6 QENQPLSETSPSSTSASALDQPSFVPKSPDASSAFSPASPATPNGTKGKDESQHTESMVL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 QENQPLSETSPSSTSASALDQPSFVPKSPDASSAFSPASPATPNGTKGKDESQHTESMVL
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE6 QSSRGIKVEDCVRMYELVHRMKGTEGLRLWQEEQERKVQALSEMASEQLKRFDEWKELKQ
::::::::: ::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 QSSRGIKVEGCVRMYELVHRMKGTEGLRLWQEEQERKVQALSEMASEQLKRFDEWKELKQ
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE6 HKEFQDLREVMEKSSREALGHQEKLKAEHRHRAKILNLKLREAEQQRVKQAEQERLRKEE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 HKEFQDLREVMEKSSREALGHQEKLKAEHRHRAKILNLKLREAEQQRVKQAEQERLRKEE
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE6 GQIRLRALYALQEEMLQLSQQLDASEQHKALLKVDLAAFQTRGNQLCSLISGIIRASSES
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 GQIRLRALYALQEEMLQLSQQLDASEQHKALLKVDLAAFQTRGNQLCSLISGIIRASSES
250 260 270 280 290 300
310 320 330 340 350 360
pF1KE6 SYPTAESQAEAERALREMRDLLMNLGQEITRACEDKRRQDEEEAQVKLQEAQMQQGPEAH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 SYPTAESQAEAERALREMRDLLMNLGQEITRACEDKRRQDEEEAQVKLQEAQMQQGPEAH
310 320 330 340 350 360
370 380 390 400 410 420
pF1KE6 KEPPAPSQGPGGKQNEDLQVKVQDITMQWYQQLQDASMQCVLTFEGLTNSKDSQAKKIKM
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 KEPPAPSQGPGGKQNEDLQVKVQDITMQWYQQLQDASMQCVLTFEGLTNSKDSQAKKIKM
370 380 390 400 410 420
430 440 450 460 470 480
pF1KE6 DLQKAATIPVSQISTIAGSKLKEIFDKIHSLLSGKPVQSGGRSVSVTLNPQGLDFVQYKL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 DLQKAATIPVSQISTIAGSKLKEIFDKIHSLLSGKPVQSGGRSVSVTLNPQGLDFVQYKL
430 440 450 460 470 480
490 500 510 520 530 540
pF1KE6 AEKFVKQGEEEVASHHEAAFPIAVVASGIWELHPRVGDLILAHLHKKCPYSVPFYPTFKE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 AEKFVKQGEEEVASHHEAAFPIAVVASGIWELHPRVGDLILAHLHKKCPYSVPFYPTFKE
490 500 510 520 530 540
550 560 570 580 590 600
pF1KE6 GMALEDYQRMLGYQVKDSKVEQQDNFLKRMSGMIRLYAAIIQLRWPYGNQQEIHPHGLNH
:::::::::::::::::::::::::::::::::::::::::::::::::.::::::::::
NP_001 GMALEDYQRMLGYQVKDSKVEQQDNFLKRMSGMIRLYAAIIQLRWPYGNRQEIHPHGLNH
550 560 570 580 590 600
610 620 630 640 650 660
pF1KE6 GWRWLAQILNMEPLSDVTATLLFDFLEVCGNALMKQYQVQFWKMLILIKEDYFPRIEAIT
::::::::::::::::::::::::::::::::::::::::::::::::::::::: .:
NP_001 GWRWLAQILNMEPLSDVTATLLFDFLEVCGNALMKQYQVQFWKMLILIKEDYFPRYQAC
610 620 630 640 650
670 680 690
pF1KE6 SSGQMGSFIRLKQFLEKCLQHKDIPVPKGFLTSSFWRS
>>XP_011516853 (OMIM: 253310,603371,611890) PREDICTED: n (707 aa)
initn: 2857 init1: 2857 opt: 2857 Z-score: 1692.4 bits: 323.6 E(85289): 1.6e-87
Smith-Waterman score: 4602; 98.4% identity (98.6% similar) in 707 aa overlap (1-698:1-707)
10 20 30 40 50 60
pF1KE6 MPSEGRCWETLKALRSSDKGRLCYYRDWLLRREDVLEECMSLPKLSSYSGWVVEHVLPHM
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 MPSEGRCWETLKALRSSDKGRLCYYRDWLLRREDVLEECMSLPKLSSYSGWVVEHVLPHM
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE6 QENQPLSETSPSSTSASALDQPSFVPKSPDASSAFSPASPATPNGTKGKDESQHTESMVL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 QENQPLSETSPSSTSASALDQPSFVPKSPDASSAFSPASPATPNGTKGKDESQHTESMVL
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE6 QSSRGIKVEDCVRMYELVHRMKGTEGLRLWQEEQERKVQALSEMASEQLKRFDEWKELKQ
::::::::: ::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 QSSRGIKVEGCVRMYELVHRMKGTEGLRLWQEEQERKVQALSEMASEQLKRFDEWKELKQ
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE6 HKEFQDLREVMEKSSREALGHQEKLKAEHRHRAKILNLKLREAEQQRVKQAEQERLRKEE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 HKEFQDLREVMEKSSREALGHQEKLKAEHRHRAKILNLKLREAEQQRVKQAEQERLRKEE
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE6 GQIRLRALYALQEEMLQLSQQLDASEQHKALLKVDLAAFQTRGNQLCSLISGIIRASSES
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 GQIRLRALYALQEEMLQLSQQLDASEQHKALLKVDLAAFQTRGNQLCSLISGIIRASSES
250 260 270 280 290 300
310 320 330 340 350 360
pF1KE6 SYPTAESQAEAERALREMRDLLMNLGQEITRACEDKRRQDEEEAQVKLQEAQMQQGPEAH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 SYPTAESQAEAERALREMRDLLMNLGQEITRACEDKRRQDEEEAQVKLQEAQMQQGPEAH
310 320 330 340 350 360
370 380 390 400 410 420
pF1KE6 KEPPAPSQGPGGKQNEDLQVKVQDITMQWYQQLQDASMQCVLTFEGLTNSKDSQAKKIKM
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 KEPPAPSQGPGGKQNEDLQVKVQDITMQWYQQLQDASMQCVLTFEGLTNSKDSQAKKIKM
370 380 390 400 410 420
430 440 450 460 470
pF1KE6 DLQKAATIPVSQISTIA---------GSKLKEIFDKIHSLLSGKPVQSGGRSVSVTLNPQ
::::::::::::::::: ::::::::::::::::::::::::::::::::::
XP_011 DLQKAATIPVSQISTIADCRSLVFMAGSKLKEIFDKIHSLLSGKPVQSGGRSVSVTLNPQ
430 440 450 460 470 480
480 490 500 510 520 530
pF1KE6 GLDFVQYKLAEKFVKQGEEEVASHHEAAFPIAVVASGIWELHPRVGDLILAHLHKKCPYS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 GLDFVQYKLAEKFVKQGEEEVASHHEAAFPIAVVASGIWELHPRVGDLILAHLHKKCPYS
490 500 510 520 530 540
540 550 560 570 580 590
pF1KE6 VPFYPTFKEGMALEDYQRMLGYQVKDSKVEQQDNFLKRMSGMIRLYAAIIQLRWPYGNQQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::.:
XP_011 VPFYPTFKEGMALEDYQRMLGYQVKDSKVEQQDNFLKRMSGMIRLYAAIIQLRWPYGNRQ
550 560 570 580 590 600
600 610 620 630 640 650
pF1KE6 EIHPHGLNHGWRWLAQILNMEPLSDVTATLLFDFLEVCGNALMKQYQVQFWKMLILIKED
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 EIHPHGLNHGWRWLAQILNMEPLSDVTATLLFDFLEVCGNALMKQYQVQFWKMLILIKED
610 620 630 640 650 660
660 670 680 690
pF1KE6 YFPRIEAITSSGQMGSFIRLKQFLEKCLQHKDIPVPKGFLTSSFWRS
:::::::::::::::::::::::::::::::::::::::::::::::
XP_011 YFPRIEAITSSGQMGSFIRLKQFLEKCLQHKDIPVPKGFLTSSFWRS
670 680 690 700
>>XP_011516851 (OMIM: 253310,603371,611890) PREDICTED: n (710 aa)
initn: 2614 init1: 2614 opt: 2614 Z-score: 1550.1 bits: 297.3 E(85289): 1.3e-79
Smith-Waterman score: 4359; 98.4% identity (98.5% similar) in 674 aa overlap (34-698:37-710)
10 20 30 40 50 60
pF1KE6 EGRCWETLKALRSSDKGRLCYYRDWLLRREDVLEECMSLPKLSSYSGWVVEHVLPHMQEN
::::::::::::::::::::::::::::::
XP_011 LCEAEAGRVLEASSSWEPGLVSHTCNPSTLDVLEECMSLPKLSSYSGWVVEHVLPHMQEN
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE6 QPLSETSPSSTSASALDQPSFVPKSPDASSAFSPASPATPNGTKGKDESQHTESMVLQSS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 QPLSETSPSSTSASALDQPSFVPKSPDASSAFSPASPATPNGTKGKDESQHTESMVLQSS
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE6 RGIKVEDCVRMYELVHRMKGTEGLRLWQEEQERKVQALSEMASEQLKRFDEWKELKQHKE
:::::: :::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 RGIKVEGCVRMYELVHRMKGTEGLRLWQEEQERKVQALSEMASEQLKRFDEWKELKQHKE
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE6 FQDLREVMEKSSREALGHQEKLKAEHRHRAKILNLKLREAEQQRVKQAEQERLRKEEGQI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 FQDLREVMEKSSREALGHQEKLKAEHRHRAKILNLKLREAEQQRVKQAEQERLRKEEGQI
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE6 RLRALYALQEEMLQLSQQLDASEQHKALLKVDLAAFQTRGNQLCSLISGIIRASSESSYP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 RLRALYALQEEMLQLSQQLDASEQHKALLKVDLAAFQTRGNQLCSLISGIIRASSESSYP
250 260 270 280 290 300
310 320 330 340 350 360
pF1KE6 TAESQAEAERALREMRDLLMNLGQEITRACEDKRRQDEEEAQVKLQEAQMQQGPEAHKEP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 TAESQAEAERALREMRDLLMNLGQEITRACEDKRRQDEEEAQVKLQEAQMQQGPEAHKEP
310 320 330 340 350 360
370 380 390 400 410 420
pF1KE6 PAPSQGPGGKQNEDLQVKVQDITMQWYQQLQDASMQCVLTFEGLTNSKDSQAKKIKMDLQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 PAPSQGPGGKQNEDLQVKVQDITMQWYQQLQDASMQCVLTFEGLTNSKDSQAKKIKMDLQ
370 380 390 400 410 420
430 440 450 460 470
pF1KE6 KAATIPVSQISTIA---------GSKLKEIFDKIHSLLSGKPVQSGGRSVSVTLNPQGLD
:::::::::::::: :::::::::::::::::::::::::::::::::::::
XP_011 KAATIPVSQISTIADCRSLVFMAGSKLKEIFDKIHSLLSGKPVQSGGRSVSVTLNPQGLD
430 440 450 460 470 480
480 490 500 510 520 530
pF1KE6 FVQYKLAEKFVKQGEEEVASHHEAAFPIAVVASGIWELHPRVGDLILAHLHKKCPYSVPF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 FVQYKLAEKFVKQGEEEVASHHEAAFPIAVVASGIWELHPRVGDLILAHLHKKCPYSVPF
490 500 510 520 530 540
540 550 560 570 580 590
pF1KE6 YPTFKEGMALEDYQRMLGYQVKDSKVEQQDNFLKRMSGMIRLYAAIIQLRWPYGNQQEIH
:::::::::::::::::::::::::::::::::::::::::::::::::::::::.::::
XP_011 YPTFKEGMALEDYQRMLGYQVKDSKVEQQDNFLKRMSGMIRLYAAIIQLRWPYGNRQEIH
550 560 570 580 590 600
600 610 620 630 640 650
pF1KE6 PHGLNHGWRWLAQILNMEPLSDVTATLLFDFLEVCGNALMKQYQVQFWKMLILIKEDYFP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 PHGLNHGWRWLAQILNMEPLSDVTATLLFDFLEVCGNALMKQYQVQFWKMLILIKEDYFP
610 620 630 640 650 660
660 670 680 690
pF1KE6 RIEAITSSGQMGSFIRLKQFLEKCLQHKDIPVPKGFLTSSFWRS
::::::::::::::::::::::::::::::::::::::::::::
XP_011 RIEAITSSGQMGSFIRLKQFLEKCLQHKDIPVPKGFLTSSFWRS
670 680 690 700 710
>>XP_011516852 (OMIM: 253310,603371,611890) PREDICTED: n (710 aa)
initn: 2614 init1: 2614 opt: 2614 Z-score: 1550.1 bits: 297.3 E(85289): 1.3e-79
Smith-Waterman score: 4359; 98.4% identity (98.5% similar) in 674 aa overlap (34-698:37-710)
10 20 30 40 50 60
pF1KE6 EGRCWETLKALRSSDKGRLCYYRDWLLRREDVLEECMSLPKLSSYSGWVVEHVLPHMQEN
::::::::::::::::::::::::::::::
XP_011 LCEAEAGRVLEASSSWEPGLVSHTCNPSTLDVLEECMSLPKLSSYSGWVVEHVLPHMQEN
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE6 QPLSETSPSSTSASALDQPSFVPKSPDASSAFSPASPATPNGTKGKDESQHTESMVLQSS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 QPLSETSPSSTSASALDQPSFVPKSPDASSAFSPASPATPNGTKGKDESQHTESMVLQSS
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE6 RGIKVEDCVRMYELVHRMKGTEGLRLWQEEQERKVQALSEMASEQLKRFDEWKELKQHKE
:::::: :::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 RGIKVEGCVRMYELVHRMKGTEGLRLWQEEQERKVQALSEMASEQLKRFDEWKELKQHKE
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE6 FQDLREVMEKSSREALGHQEKLKAEHRHRAKILNLKLREAEQQRVKQAEQERLRKEEGQI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 FQDLREVMEKSSREALGHQEKLKAEHRHRAKILNLKLREAEQQRVKQAEQERLRKEEGQI
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE6 RLRALYALQEEMLQLSQQLDASEQHKALLKVDLAAFQTRGNQLCSLISGIIRASSESSYP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 RLRALYALQEEMLQLSQQLDASEQHKALLKVDLAAFQTRGNQLCSLISGIIRASSESSYP
250 260 270 280 290 300
310 320 330 340 350 360
pF1KE6 TAESQAEAERALREMRDLLMNLGQEITRACEDKRRQDEEEAQVKLQEAQMQQGPEAHKEP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 TAESQAEAERALREMRDLLMNLGQEITRACEDKRRQDEEEAQVKLQEAQMQQGPEAHKEP
310 320 330 340 350 360
370 380 390 400 410 420
pF1KE6 PAPSQGPGGKQNEDLQVKVQDITMQWYQQLQDASMQCVLTFEGLTNSKDSQAKKIKMDLQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 PAPSQGPGGKQNEDLQVKVQDITMQWYQQLQDASMQCVLTFEGLTNSKDSQAKKIKMDLQ
370 380 390 400 410 420
430 440 450 460 470
pF1KE6 KAATIPVSQISTIA---------GSKLKEIFDKIHSLLSGKPVQSGGRSVSVTLNPQGLD
:::::::::::::: :::::::::::::::::::::::::::::::::::::
XP_011 KAATIPVSQISTIADCRSLVFMAGSKLKEIFDKIHSLLSGKPVQSGGRSVSVTLNPQGLD
430 440 450 460 470 480
480 490 500 510 520 530
pF1KE6 FVQYKLAEKFVKQGEEEVASHHEAAFPIAVVASGIWELHPRVGDLILAHLHKKCPYSVPF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 FVQYKLAEKFVKQGEEEVASHHEAAFPIAVVASGIWELHPRVGDLILAHLHKKCPYSVPF
490 500 510 520 530 540
540 550 560 570 580 590
pF1KE6 YPTFKEGMALEDYQRMLGYQVKDSKVEQQDNFLKRMSGMIRLYAAIIQLRWPYGNQQEIH
:::::::::::::::::::::::::::::::::::::::::::::::::::::::.::::
XP_011 YPTFKEGMALEDYQRMLGYQVKDSKVEQQDNFLKRMSGMIRLYAAIIQLRWPYGNRQEIH
550 560 570 580 590 600
600 610 620 630 640 650
pF1KE6 PHGLNHGWRWLAQILNMEPLSDVTATLLFDFLEVCGNALMKQYQVQFWKMLILIKEDYFP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 PHGLNHGWRWLAQILNMEPLSDVTATLLFDFLEVCGNALMKQYQVQFWKMLILIKEDYFP
610 620 630 640 650 660
660 670 680 690
pF1KE6 RIEAITSSGQMGSFIRLKQFLEKCLQHKDIPVPKGFLTSSFWRS
::::::::::::::::::::::::::::::::::::::::::::
XP_011 RIEAITSSGQMGSFIRLKQFLEKCLQHKDIPVPKGFLTSSFWRS
670 680 690 700 710
>>XP_006717122 (OMIM: 253310,603371,611890) PREDICTED: n (710 aa)
initn: 2614 init1: 2614 opt: 2614 Z-score: 1550.1 bits: 297.3 E(85289): 1.3e-79
Smith-Waterman score: 4359; 98.4% identity (98.5% similar) in 674 aa overlap (34-698:37-710)
10 20 30 40 50 60
pF1KE6 EGRCWETLKALRSSDKGRLCYYRDWLLRREDVLEECMSLPKLSSYSGWVVEHVLPHMQEN
::::::::::::::::::::::::::::::
XP_006 LCEAEAGRVLEASSSWEPGLVSHTCNPSTLDVLEECMSLPKLSSYSGWVVEHVLPHMQEN
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE6 QPLSETSPSSTSASALDQPSFVPKSPDASSAFSPASPATPNGTKGKDESQHTESMVLQSS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 QPLSETSPSSTSASALDQPSFVPKSPDASSAFSPASPATPNGTKGKDESQHTESMVLQSS
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE6 RGIKVEDCVRMYELVHRMKGTEGLRLWQEEQERKVQALSEMASEQLKRFDEWKELKQHKE
:::::: :::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 RGIKVEGCVRMYELVHRMKGTEGLRLWQEEQERKVQALSEMASEQLKRFDEWKELKQHKE
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE6 FQDLREVMEKSSREALGHQEKLKAEHRHRAKILNLKLREAEQQRVKQAEQERLRKEEGQI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 FQDLREVMEKSSREALGHQEKLKAEHRHRAKILNLKLREAEQQRVKQAEQERLRKEEGQI
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE6 RLRALYALQEEMLQLSQQLDASEQHKALLKVDLAAFQTRGNQLCSLISGIIRASSESSYP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 RLRALYALQEEMLQLSQQLDASEQHKALLKVDLAAFQTRGNQLCSLISGIIRASSESSYP
250 260 270 280 290 300
310 320 330 340 350 360
pF1KE6 TAESQAEAERALREMRDLLMNLGQEITRACEDKRRQDEEEAQVKLQEAQMQQGPEAHKEP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 TAESQAEAERALREMRDLLMNLGQEITRACEDKRRQDEEEAQVKLQEAQMQQGPEAHKEP
310 320 330 340 350 360
370 380 390 400 410 420
pF1KE6 PAPSQGPGGKQNEDLQVKVQDITMQWYQQLQDASMQCVLTFEGLTNSKDSQAKKIKMDLQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 PAPSQGPGGKQNEDLQVKVQDITMQWYQQLQDASMQCVLTFEGLTNSKDSQAKKIKMDLQ
370 380 390 400 410 420
430 440 450 460 470
pF1KE6 KAATIPVSQISTIA---------GSKLKEIFDKIHSLLSGKPVQSGGRSVSVTLNPQGLD
:::::::::::::: :::::::::::::::::::::::::::::::::::::
XP_006 KAATIPVSQISTIADCRSLVFMAGSKLKEIFDKIHSLLSGKPVQSGGRSVSVTLNPQGLD
430 440 450 460 470 480
480 490 500 510 520 530
pF1KE6 FVQYKLAEKFVKQGEEEVASHHEAAFPIAVVASGIWELHPRVGDLILAHLHKKCPYSVPF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 FVQYKLAEKFVKQGEEEVASHHEAAFPIAVVASGIWELHPRVGDLILAHLHKKCPYSVPF
490 500 510 520 530 540
540 550 560 570 580 590
pF1KE6 YPTFKEGMALEDYQRMLGYQVKDSKVEQQDNFLKRMSGMIRLYAAIIQLRWPYGNQQEIH
:::::::::::::::::::::::::::::::::::::::::::::::::::::::.::::
XP_006 YPTFKEGMALEDYQRMLGYQVKDSKVEQQDNFLKRMSGMIRLYAAIIQLRWPYGNRQEIH
550 560 570 580 590 600
600 610 620 630 640 650
pF1KE6 PHGLNHGWRWLAQILNMEPLSDVTATLLFDFLEVCGNALMKQYQVQFWKMLILIKEDYFP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 PHGLNHGWRWLAQILNMEPLSDVTATLLFDFLEVCGNALMKQYQVQFWKMLILIKEDYFP
610 620 630 640 650 660
660 670 680 690
pF1KE6 RIEAITSSGQMGSFIRLKQFLEKCLQHKDIPVPKGFLTSSFWRS
::::::::::::::::::::::::::::::::::::::::::::
XP_006 RIEAITSSGQMGSFIRLKQFLEKCLQHKDIPVPKGFLTSSFWRS
670 680 690 700 710
698 residues in 1 query sequences
60827320 residues in 85289 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Tue Nov 8 15:44:44 2016 done: Tue Nov 8 15:44:46 2016
Total Scan time: 9.550 Total Display time: 0.110
Function used was FASTA [36.3.4 Apr, 2011]