FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448

Query: pF1KE6726, 698 aa
  1>>>pF1KE6726 698 - 698 aa - 698 aa
Library: human.CCDS.faa
  18511270 residues in 32554 sequences

Statistics:  Expectation_n fit: rho(ln(x))= 9.1261+/-0.00105; mu= 3.2281+/- 0.063
 mean_var=220.7587+/-46.424, 0's: 0 Z-trim(111.5): 39  B-trim: 302 in 2/49
 Lambda= 0.086321
 statistics sampled from 12433 (12467) to 12433 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
 ktup: 2, E-join: 1 (0.725), E-opt: 0.2 (0.383), width:  16
 Scan time:  2.930

The best scores are:                                      opt bits E(32554)
CCDS35154.1 GLE1 gene_id:2733|Hs108|chr9           ( 698) 4630 589.9 4.3e-168
CCDS6904.1 GLE1 gene_id:2733|Hs108|chr9            ( 659) 4346 554.5 1.8e-157


>>CCDS35154.1 GLE1 gene_id:2733|Hs108|chr9                (698 aa)
 initn: 4630 init1: 4630 opt: 4630  Z-score: 3131.3  bits: 589.9 E(32554): 4.3e-168
Smith-Waterman score: 4630; 99.7% identity (99.9% similar) in 698 aa overlap (1-698:1-698)

               10        20        30        40        50        60
pF1KE6 MPSEGRCWETLKALRSSDKGRLCYYRDWLLRREDVLEECMSLPKLSSYSGWVVEHVLPHM
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS35 MPSEGRCWETLKALRSSDKGRLCYYRDWLLRREDVLEECMSLPKLSSYSGWVVEHVLPHM
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KE6 QENQPLSETSPSSTSASALDQPSFVPKSPDASSAFSPASPATPNGTKGKDESQHTESMVL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS35 QENQPLSETSPSSTSASALDQPSFVPKSPDASSAFSPASPATPNGTKGKDESQHTESMVL
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KE6 QSSRGIKVEDCVRMYELVHRMKGTEGLRLWQEEQERKVQALSEMASEQLKRFDEWKELKQ
       ::::::::: ::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS35 QSSRGIKVEGCVRMYELVHRMKGTEGLRLWQEEQERKVQALSEMASEQLKRFDEWKELKQ
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KE6 HKEFQDLREVMEKSSREALGHQEKLKAEHRHRAKILNLKLREAEQQRVKQAEQERLRKEE
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS35 HKEFQDLREVMEKSSREALGHQEKLKAEHRHRAKILNLKLREAEQQRVKQAEQERLRKEE
              190       200       210       220       230       240

              250       260       270       280       290       300
pF1KE6 GQIRLRALYALQEEMLQLSQQLDASEQHKALLKVDLAAFQTRGNQLCSLISGIIRASSES
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS35 GQIRLRALYALQEEMLQLSQQLDASEQHKALLKVDLAAFQTRGNQLCSLISGIIRASSES
              250       260       270       280       290       300

              310       320       330       340       350       360
pF1KE6 SYPTAESQAEAERALREMRDLLMNLGQEITRACEDKRRQDEEEAQVKLQEAQMQQGPEAH
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS35 SYPTAESQAEAERALREMRDLLMNLGQEITRACEDKRRQDEEEAQVKLQEAQMQQGPEAH
              310       320       330       340       350       360

              370       380       390       400       410       420
pF1KE6 KEPPAPSQGPGGKQNEDLQVKVQDITMQWYQQLQDASMQCVLTFEGLTNSKDSQAKKIKM
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS35 KEPPAPSQGPGGKQNEDLQVKVQDITMQWYQQLQDASMQCVLTFEGLTNSKDSQAKKIKM
              370       380       390       400       410       420

              430       440       450       460       470       480
pF1KE6 DLQKAATIPVSQISTIAGSKLKEIFDKIHSLLSGKPVQSGGRSVSVTLNPQGLDFVQYKL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS35 DLQKAATIPVSQISTIAGSKLKEIFDKIHSLLSGKPVQSGGRSVSVTLNPQGLDFVQYKL
              430       440       450       460       470       480

              490       500       510       520       530       540
pF1KE6 AEKFVKQGEEEVASHHEAAFPIAVVASGIWELHPRVGDLILAHLHKKCPYSVPFYPTFKE
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS35 AEKFVKQGEEEVASHHEAAFPIAVVASGIWELHPRVGDLILAHLHKKCPYSVPFYPTFKE
              490       500       510       520       530       540

              550       560       570       580       590       600
pF1KE6 GMALEDYQRMLGYQVKDSKVEQQDNFLKRMSGMIRLYAAIIQLRWPYGNQQEIHPHGLNH
       :::::::::::::::::::::::::::::::::::::::::::::::::.::::::::::
CCDS35 GMALEDYQRMLGYQVKDSKVEQQDNFLKRMSGMIRLYAAIIQLRWPYGNRQEIHPHGLNH
              550       560       570       580       590       600

              610       620       630       640       650       660
pF1KE6 GWRWLAQILNMEPLSDVTATLLFDFLEVCGNALMKQYQVQFWKMLILIKEDYFPRIEAIT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS35 GWRWLAQILNMEPLSDVTATLLFDFLEVCGNALMKQYQVQFWKMLILIKEDYFPRIEAIT
              610       620       630       640       650       660

              670       680       690        
pF1KE6 SSGQMGSFIRLKQFLEKCLQHKDIPVPKGFLTSSFWRS
       ::::::::::::::::::::::::::::::::::::::
CCDS35 SSGQMGSFIRLKQFLEKCLQHKDIPVPKGFLTSSFWRS
              670       680       690        

>>CCDS6904.1 GLE1 gene_id:2733|Hs108|chr9                 (659 aa)
 initn: 4424 init1: 4346 opt: 4346  Z-score: 2940.5  bits: 554.5 E(32554): 1.8e-157
Smith-Waterman score: 4346; 99.4% identity (99.7% similar) in 658 aa overlap (1-658:1-658)

               10        20        30        40        50        60
pF1KE6 MPSEGRCWETLKALRSSDKGRLCYYRDWLLRREDVLEECMSLPKLSSYSGWVVEHVLPHM
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS69 MPSEGRCWETLKALRSSDKGRLCYYRDWLLRREDVLEECMSLPKLSSYSGWVVEHVLPHM
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KE6 QENQPLSETSPSSTSASALDQPSFVPKSPDASSAFSPASPATPNGTKGKDESQHTESMVL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS69 QENQPLSETSPSSTSASALDQPSFVPKSPDASSAFSPASPATPNGTKGKDESQHTESMVL
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KE6 QSSRGIKVEDCVRMYELVHRMKGTEGLRLWQEEQERKVQALSEMASEQLKRFDEWKELKQ
       ::::::::: ::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS69 QSSRGIKVEGCVRMYELVHRMKGTEGLRLWQEEQERKVQALSEMASEQLKRFDEWKELKQ
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KE6 HKEFQDLREVMEKSSREALGHQEKLKAEHRHRAKILNLKLREAEQQRVKQAEQERLRKEE
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS69 HKEFQDLREVMEKSSREALGHQEKLKAEHRHRAKILNLKLREAEQQRVKQAEQERLRKEE
              190       200       210       220       230       240

              250       260       270       280       290       300
pF1KE6 GQIRLRALYALQEEMLQLSQQLDASEQHKALLKVDLAAFQTRGNQLCSLISGIIRASSES
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS69 GQIRLRALYALQEEMLQLSQQLDASEQHKALLKVDLAAFQTRGNQLCSLISGIIRASSES
              250       260       270       280       290       300

              310       320       330       340       350       360
pF1KE6 SYPTAESQAEAERALREMRDLLMNLGQEITRACEDKRRQDEEEAQVKLQEAQMQQGPEAH
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS69 SYPTAESQAEAERALREMRDLLMNLGQEITRACEDKRRQDEEEAQVKLQEAQMQQGPEAH
              310       320       330       340       350       360

              370       380       390       400       410       420
pF1KE6 KEPPAPSQGPGGKQNEDLQVKVQDITMQWYQQLQDASMQCVLTFEGLTNSKDSQAKKIKM
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS69 KEPPAPSQGPGGKQNEDLQVKVQDITMQWYQQLQDASMQCVLTFEGLTNSKDSQAKKIKM
              370       380       390       400       410       420

              430       440       450       460       470       480
pF1KE6 DLQKAATIPVSQISTIAGSKLKEIFDKIHSLLSGKPVQSGGRSVSVTLNPQGLDFVQYKL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS69 DLQKAATIPVSQISTIAGSKLKEIFDKIHSLLSGKPVQSGGRSVSVTLNPQGLDFVQYKL
              430       440       450       460       470       480

              490       500       510       520       530       540
pF1KE6 AEKFVKQGEEEVASHHEAAFPIAVVASGIWELHPRVGDLILAHLHKKCPYSVPFYPTFKE
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS69 AEKFVKQGEEEVASHHEAAFPIAVVASGIWELHPRVGDLILAHLHKKCPYSVPFYPTFKE
              490       500       510       520       530       540

              550       560       570       580       590       600
pF1KE6 GMALEDYQRMLGYQVKDSKVEQQDNFLKRMSGMIRLYAAIIQLRWPYGNQQEIHPHGLNH
       :::::::::::::::::::::::::::::::::::::::::::::::::.::::::::::
CCDS69 GMALEDYQRMLGYQVKDSKVEQQDNFLKRMSGMIRLYAAIIQLRWPYGNRQEIHPHGLNH
              550       560       570       580       590       600

              610       620       630       640       650       660
pF1KE6 GWRWLAQILNMEPLSDVTATLLFDFLEVCGNALMKQYQVQFWKMLILIKEDYFPRIEAIT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::: .:  
CCDS69 GWRWLAQILNMEPLSDVTATLLFDFLEVCGNALMKQYQVQFWKMLILIKEDYFPRYQAC 
              610       620       630       640       650          

              670       680       690        
pF1KE6 SSGQMGSFIRLKQFLEKCLQHKDIPVPKGFLTSSFWRS




698 residues in 1 query   sequences
18511270 residues in 32554 library sequences
 Tcomplib [36.3.4 Apr, 2011] (8 proc)
 start: Tue Nov  8 15:44:43 2016 done: Tue Nov  8 15:44:44 2016
 Total Scan time:  2.930 Total Display time:  0.030

Function used was FASTA [36.3.4 Apr, 2011]