Result of FASTA (ccds) for
pFN21AE6713
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KE6713, 721 aa
1>>>pF1KE6713 721 - 721 aa - 721 aa
Library: human.CCDS.faa
18511270 residues in 32554 sequences
Statistics: Expectation_n fit: rho(ln(x))= 6.7376+/-0.00082; mu= 15.0121+/- 0.050
mean_var=132.8889+/-26.571, 0's: 0 Z-trim(113.2): 11 B-trim: 318 in 1/52
Lambda= 0.111258
statistics sampled from 13838 (13847) to 13838 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.747), E-opt: 0.2 (0.425), width: 16
Scan time: 3.520
The best scores are: opt bits E(32554)
CCDS31473.1 LARGE2 gene_id:120071|Hs108|chr11 ( 721) 5008 815.4 0
CCDS76399.1 LARGE2 gene_id:120071|Hs108|chr11 ( 690) 4597 749.4 4.2e-216
CCDS13912.1 LARGE1 gene_id:9215|Hs108|chr22 ( 756) 3149 517.0 4.2e-146
>>CCDS31473.1 LARGE2 gene_id:120071|Hs108|chr11 (721 aa)
initn: 5008 init1: 5008 opt: 5008 Z-score: 4349.5 bits: 815.4 E(32554): 0
Smith-Waterman score: 5008; 99.9% identity (100.0% similar) in 721 aa overlap (1-721:1-721)
10 20 30 40 50 60
pF1KE6 MLPRGRPRALGAAALLLLLLLLGFLLFGGDLGCERRKPGGRAGAPGCFPGPLMPRVPPDG
::::::::::::::::::::::::::::::::::::.:::::::::::::::::::::::
CCDS31 MLPRGRPRALGAAALLLLLLLLGFLLFGGDLGCERREPGGRAGAPGCFPGPLMPRVPPDG
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE6 RLRRAAALDGDPGAGPGDHNRSDCGPQPPPPPKCELLHVAIVCAGHNSSRDVITLVKSML
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS31 RLRRAAALDGDPGAGPGDHNRSDCGPQPPPPPKCELLHVAIVCAGHNSSRDVITLVKSML
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE6 FYRKNPLHLHLVTDAVARNILETLFHTWMVPAVRVSFYHADQLKPQVSWIPNKHYSGLYG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS31 FYRKNPLHLHLVTDAVARNILETLFHTWMVPAVRVSFYHADQLKPQVSWIPNKHYSGLYG
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE6 LMKLVLPSALPAELARVIVLDTDVTFASDISELWALFAHFSDTQAIGLVENQSDWYLGNL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS31 LMKLVLPSALPAELARVIVLDTDVTFASDISELWALFAHFSDTQAIGLVENQSDWYLGNL
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE6 WKNHRPWPALGRGFNTGVILLRLDRLRQAGWEQMWRLTARRELLSLPATSLADQDIFNAV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS31 WKNHRPWPALGRGFNTGVILLRLDRLRQAGWEQMWRLTARRELLSLPATSLADQDIFNAV
250 260 270 280 290 300
310 320 330 340 350 360
pF1KE6 IKEHPGLVQRLPCVWNVQLSDHTLAERCYSEASDLKVIHWNSPKKLRVKNKHVEFFRNFY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS31 IKEHPGLVQRLPCVWNVQLSDHTLAERCYSEASDLKVIHWNSPKKLRVKNKHVEFFRNFY
310 320 330 340 350 360
370 380 390 400 410 420
pF1KE6 LTFLEYDGNLLRRELFVCPSQPPPGAEQLQQALAQLDEEDPCFEFRQQQLTVHRVHVTFL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS31 LTFLEYDGNLLRRELFVCPSQPPPGAEQLQQALAQLDEEDPCFEFRQQQLTVHRVHVTFL
370 380 390 400 410 420
430 440 450 460 470 480
pF1KE6 PHEPPPPRPHDVTLVAQLSMDRLQMLEALCRHWPGPMSLALYLTDAEAQQFLHFVEASPV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS31 PHEPPPPRPHDVTLVAQLSMDRLQMLEALCRHWPGPMSLALYLTDAEAQQFLHFVEASPV
430 440 450 460 470 480
490 500 510 520 530 540
pF1KE6 LAARQDVAYHVVYREGPLYPVNQLRNVALAQALTPYVFLSDIDFLPAYSLYDYLRASIEQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS31 LAARQDVAYHVVYREGPLYPVNQLRNVALAQALTPYVFLSDIDFLPAYSLYDYLRASIEQ
490 500 510 520 530 540
550 560 570 580 590 600
pF1KE6 LGLGSRRKAALVVPAFETLRYRFSFPHSKVELLALLDAGTLYTFRYHEWPRGHAPTDYAR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS31 LGLGSRRKAALVVPAFETLRYRFSFPHSKVELLALLDAGTLYTFRYHEWPRGHAPTDYAR
550 560 570 580 590 600
610 620 630 640 650 660
pF1KE6 WREAQAPYRVQWAANYEPYVVVPRDCPRYDPRFVGFGWNKVAHIVELDAQEYELLVLPEA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS31 WREAQAPYRVQWAANYEPYVVVPRDCPRYDPRFVGFGWNKVAHIVELDAQEYELLVLPEA
610 620 630 640 650 660
670 680 690 700 710 720
pF1KE6 FTIHLPHAPSLDISRFRSSPTYRDCLQALKDEFHQDLSRHHGAAALKYLPALQQPQSPAR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS31 FTIHLPHAPSLDISRFRSSPTYRDCLQALKDEFHQDLSRHHGAAALKYLPALQQPQSPAR
670 680 690 700 710 720
pF1KE6 G
:
CCDS31 G
>>CCDS76399.1 LARGE2 gene_id:120071|Hs108|chr11 (690 aa)
initn: 4597 init1: 4597 opt: 4597 Z-score: 3993.2 bits: 749.4 E(32554): 4.2e-216
Smith-Waterman score: 4693; 95.7% identity (95.7% similar) in 721 aa overlap (1-721:1-690)
10 20 30 40 50 60
pF1KE6 MLPRGRPRALGAAALLLLLLLLGFLLFGGDLGCERRKPGGRAGAPGCFPGPLMPRVPPDG
::::::::::::::::::::::::::: ::
CCDS76 MLPRGRPRALGAAALLLLLLLLGFLLF-------------------------------DG
10 20
70 80 90 100 110 120
pF1KE6 RLRRAAALDGDPGAGPGDHNRSDCGPQPPPPPKCELLHVAIVCAGHNSSRDVITLVKSML
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS76 RLRRAAALDGDPGAGPGDHNRSDCGPQPPPPPKCELLHVAIVCAGHNSSRDVITLVKSML
30 40 50 60 70 80
130 140 150 160 170 180
pF1KE6 FYRKNPLHLHLVTDAVARNILETLFHTWMVPAVRVSFYHADQLKPQVSWIPNKHYSGLYG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS76 FYRKNPLHLHLVTDAVARNILETLFHTWMVPAVRVSFYHADQLKPQVSWIPNKHYSGLYG
90 100 110 120 130 140
190 200 210 220 230 240
pF1KE6 LMKLVLPSALPAELARVIVLDTDVTFASDISELWALFAHFSDTQAIGLVENQSDWYLGNL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS76 LMKLVLPSALPAELARVIVLDTDVTFASDISELWALFAHFSDTQAIGLVENQSDWYLGNL
150 160 170 180 190 200
250 260 270 280 290 300
pF1KE6 WKNHRPWPALGRGFNTGVILLRLDRLRQAGWEQMWRLTARRELLSLPATSLADQDIFNAV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS76 WKNHRPWPALGRGFNTGVILLRLDRLRQAGWEQMWRLTARRELLSLPATSLADQDIFNAV
210 220 230 240 250 260
310 320 330 340 350 360
pF1KE6 IKEHPGLVQRLPCVWNVQLSDHTLAERCYSEASDLKVIHWNSPKKLRVKNKHVEFFRNFY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS76 IKEHPGLVQRLPCVWNVQLSDHTLAERCYSEASDLKVIHWNSPKKLRVKNKHVEFFRNFY
270 280 290 300 310 320
370 380 390 400 410 420
pF1KE6 LTFLEYDGNLLRRELFVCPSQPPPGAEQLQQALAQLDEEDPCFEFRQQQLTVHRVHVTFL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS76 LTFLEYDGNLLRRELFVCPSQPPPGAEQLQQALAQLDEEDPCFEFRQQQLTVHRVHVTFL
330 340 350 360 370 380
430 440 450 460 470 480
pF1KE6 PHEPPPPRPHDVTLVAQLSMDRLQMLEALCRHWPGPMSLALYLTDAEAQQFLHFVEASPV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS76 PHEPPPPRPHDVTLVAQLSMDRLQMLEALCRHWPGPMSLALYLTDAEAQQFLHFVEASPV
390 400 410 420 430 440
490 500 510 520 530 540
pF1KE6 LAARQDVAYHVVYREGPLYPVNQLRNVALAQALTPYVFLSDIDFLPAYSLYDYLRASIEQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS76 LAARQDVAYHVVYREGPLYPVNQLRNVALAQALTPYVFLSDIDFLPAYSLYDYLRASIEQ
450 460 470 480 490 500
550 560 570 580 590 600
pF1KE6 LGLGSRRKAALVVPAFETLRYRFSFPHSKVELLALLDAGTLYTFRYHEWPRGHAPTDYAR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS76 LGLGSRRKAALVVPAFETLRYRFSFPHSKVELLALLDAGTLYTFRYHEWPRGHAPTDYAR
510 520 530 540 550 560
610 620 630 640 650 660
pF1KE6 WREAQAPYRVQWAANYEPYVVVPRDCPRYDPRFVGFGWNKVAHIVELDAQEYELLVLPEA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS76 WREAQAPYRVQWAANYEPYVVVPRDCPRYDPRFVGFGWNKVAHIVELDAQEYELLVLPEA
570 580 590 600 610 620
670 680 690 700 710 720
pF1KE6 FTIHLPHAPSLDISRFRSSPTYRDCLQALKDEFHQDLSRHHGAAALKYLPALQQPQSPAR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS76 FTIHLPHAPSLDISRFRSSPTYRDCLQALKDEFHQDLSRHHGAAALKYLPALQQPQSPAR
630 640 650 660 670 680
pF1KE6 G
:
CCDS76 G
690
>>CCDS13912.1 LARGE1 gene_id:9215|Hs108|chr22 (756 aa)
initn: 3016 init1: 2426 opt: 3149 Z-score: 2736.6 bits: 517.0 E(32554): 4.2e-146
Smith-Waterman score: 3149; 67.3% identity (87.4% similar) in 666 aa overlap (55-711:89-752)
30 40 50 60 70
pF1KE6 LLFGGDLGCERRKPGGRAGAPGCFPGPLMPRVPPDGRLRRAAALDGDPGAGPGDH-----
:.: : .. . . . :.: ...
CCDS13 QRERESLEVRMREVEEENRALRRQLSLAQGRAPSHRRGNHSKTYSMEEGTGDSENLRAGI
60 70 80 90 100 110
80 90 100 110 120 130
pF1KE6 ---NRSDCGPQPPPPPKCELLHVAIVCAGHNSSRDVITLVKSMLFYRKNPLHLHLVTDAV
: :.:: :: ::: .::::::::.:.::::.:::::.::.:.::::.::..:..
CCDS13 VAGNSSECGQQPVVE-KCETIHVAIVCAGYNASRDVVTLVKSVLFHRRNPLHFHLIADSI
120 130 140 150 160 170
140 150 160 170 180 190
pF1KE6 ARNILETLFHTWMVPAVRVSFYHADQLKPQVSWIPNKHYSGLYGLMKLVLPSALPAELAR
:..:: :::.:::::::::.::.::.:: .:::::::::::.:::::::: ..:::.: :
CCDS13 AEQILATLFQTWMVPAVRVDFYNADELKSEVSWIPNKHYSGIYGLMKLVLTKTLPANLER
180 190 200 210 220 230
200 210 220 230 240 250
pF1KE6 VIVLDTDVTFASDISELWALFAHFSDTQAIGLVENQSDWYLGNLWKNHRPWPALGRGFNT
:::::::.:::.::.::::.: .:. :..:::::::::::::::::::::::::::.::
CCDS13 VIVLDTDITFATDIAELWAVFHKFKGQQVLGLVENQSDWYLGNLWKNHRPWPALGRGYNT
240 250 260 270 280 290
260 270 280 290 300 310
pF1KE6 GVILLRLDRLRQAGWEQMWRLTARRELLSLPATSLADQDIFNAVIKEHPGLVQRLPCVWN
::::: ::.::. :::::::::.:::... .::::::::::::::..: :: .::: ::
CCDS13 GVILLLLDKLRKMKWEQMWRLTAERELMGMLSTSLADQDIFNAVIKQNPFLVYQLPCFWN
300 310 320 330 340 350
320 330 340 350 360 370
pF1KE6 VQLSDHTLAERCYSEASDLKVIHWNSPKKLRVKNKHVEFFRNFYLTFLEYDGNLLRRELF
::::::: .:.:: ..::::::::::::::::::::::::::.:::::::::::::::::
CCDS13 VQLSDHTRSEQCYRDVSDLKVIHWNSPKKLRVKNKHVEFFRNLYLTFLEYDGNLLRRELF
360 370 380 390 400 410
380 390 400 410 420 430
pF1KE6 VCPSQPPPGAEQLQQALAQLDEEDPCFEFRQQQLTVHRVHVTFLPHE-PPPPRPHDVTLV
:::. ..:.::. :..:::.: :.:::....::::.:. :: .: : :::::
CCDS13 GCPSEADVNSENLQKQLSELDEDDLCYEFRRERFTVHRTHLYFLHYEYEPAADSTDVTLV
420 430 440 450 460 470
440 450 460 470 480 490
pF1KE6 AQLSMDRLQMLEALCRHWPGPMSLALYLTDAEAQQFLHFVEASPVLAARQDVAYHVVYRE
:::::::::::::.:.:: ::.::::::.::::::::.....: :: .:..:.::.::.:
CCDS13 AQLSMDRLQMLEAICKHWEGPISLALYLSDAEAQQFLRYAQGSEVLMSRHNVGYHIVYKE
480 490 500 510 520 530
500 510 520 530 540 550
pF1KE6 GPLYPVNQLRNVALAQALTPYVFLSDIDFLPAYSLYDYLRASIEQLGLGSRRKAALVVPA
: .:::: :::::. . :::.::::::::: :.::.::: :. :: :.. .:: ..:::
CCDS13 GQFYPVNLLRNVAMKHISTPYMFLSDIDFLPMYGLYEYLRKSVIQLDLANTKKA-MIVPA
540 550 560 570 580 590
560 570 580 590 600 610
pF1KE6 FETLRYRFSFPHSKVELLALLDAGTLYTFRYHEWPRGHAPTDYARWREAQAPYRVQWAAN
:::::::.:::.::.:::..:: :::.::::: : .:::::..:.:: : .::::.: :.
CCDS13 FETLRYRLSFPKSKAELLSMLDMGTLFTFRYHVWTKGHAPTNFAKWRTATTPYRVEWEAD
600 610 620 630 640 650
620 630 640 650 660 670
pF1KE6 YEPYVVVPRDCPRYDPRFVGFGWNKVAHIVELDAQEYELLVLPEAFTIHLPHAPSLDISR
.:::::: ::::.:: :::::::::::::.:::.::::..:::.:. ::.:::::.::..
CCDS13 FEPYVVVRRDCPEYDRRFVGFGWNKVAHIMELDVQEYEFIVLPNAYMIHMPHAPSFDITK
660 670 680 690 700 710
680 690 700 710 720
pF1KE6 FRSSPTYRDCLQALKDEFHQDLSRHHGAAALKYLPALQQPQSPARG
:::. :: ::..::.::.::.::..: :::::: :
CCDS13 FRSNKQYRICLKTLKEEFQQDMSRRYGFAALKYLTAENNS
720 730 740 750
721 residues in 1 query sequences
18511270 residues in 32554 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Tue Nov 8 15:37:22 2016 done: Tue Nov 8 15:37:23 2016
Total Scan time: 3.520 Total Display time: 0.040
Function used was FASTA [36.3.4 Apr, 2011]