Result of FASTA (omim) for
pFN21AE6706
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KE6706, 1004 aa
1>>>pF1KE6706 1004 - 1004 aa - 1004 aa
Library: /omim/omim.rfq.tfa
60827320 residues in 85289 sequences
Statistics: Expectation_n fit: rho(ln(x))= 5.6134+/-0.000482; mu= 19.2125+/- 0.030
mean_var=65.2999+/-12.445, 0's: 0 Z-trim(109.5): 30 B-trim: 0 in 0/49
Lambda= 0.158715
statistics sampled from 17692 (17703) to 17692 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.567), E-opt: 0.2 (0.208), width: 16
Scan time: 8.430
The best scores are: opt bits E(85289)
NP_115759 (OMIM: 606118,614072) Hermansky-Pudlak s (1004) 6661 1535.0 0
XP_016862812 (OMIM: 606118,614072) PREDICTED: Herm ( 963) 6391 1473.1 0
NP_001295187 (OMIM: 606118,614072) Hermansky-Pudla ( 839) 5064 1169.3 0
XP_005247891 (OMIM: 606118,614072) PREDICTED: Herm ( 763) 5033 1162.2 0
>>NP_115759 (OMIM: 606118,614072) Hermansky-Pudlak syndr (1004 aa)
initn: 6661 init1: 6661 opt: 6661 Z-score: 8233.4 bits: 1535.0 E(85289): 0
Smith-Waterman score: 6661; 100.0% identity (100.0% similar) in 1004 aa overlap (1-1004:1-1004)
10 20 30 40 50 60
pF1KE6 MVQLYNLHPFGSQQVVPCKLEPDRFCGGGRDALFVAAGCKVEAFAVAGQELCQPRCAFST
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_115 MVQLYNLHPFGSQQVVPCKLEPDRFCGGGRDALFVAAGCKVEAFAVAGQELCQPRCAFST
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE6 LGRVLRLAYSEAGDYLVAIEEKNKATFLRAYVNWRNKRTENSRVCIRMIGHNVEGPFSKA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_115 LGRVLRLAYSEAGDYLVAIEEKNKATFLRAYVNWRNKRTENSRVCIRMIGHNVEGPFSKA
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE6 FRDQMYIIEMPLSEAPLCISCCPVKGDLLVGCTNKLVLFSLKYQIINEEFSLLDFERSLI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_115 FRDQMYIIEMPLSEAPLCISCCPVKGDLLVGCTNKLVLFSLKYQIINEEFSLLDFERSLI
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE6 IHIDNITPVEVSFCVGYVAVMSDLEVLIVKLESGPKNGERVHHHPHKTNNRIRRTEEGIS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_115 IHIDNITPVEVSFCVGYVAVMSDLEVLIVKLESGPKNGERVHHHPHKTNNRIRRTEEGIS
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE6 NEISQLESDDFVICQKPLELLGEKSEQSGLSVTLESTGLADEKRKYSHFQHLLYRRFAPD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_115 NEISQLESDDFVICQKPLELLGEKSEQSGLSVTLESTGLADEKRKYSHFQHLLYRRFAPD
250 260 270 280 290 300
310 320 330 340 350 360
pF1KE6 ISSYVLSDDIKLHSLQLLPIYQTGSLTSDGKNLSQEKELLSLFCFFSLPHVGYLYMVVKS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_115 ISSYVLSDDIKLHSLQLLPIYQTGSLTSDGKNLSQEKELLSLFCFFSLPHVGYLYMVVKS
310 320 330 340 350 360
370 380 390 400 410 420
pF1KE6 VELMSVYQYPEKSQQAVLTPQFLHVITSNNLQCFTVRCSAAAAREEDPYMDTTLKACPPV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_115 VELMSVYQYPEKSQQAVLTPQFLHVITSNNLQCFTVRCSAAAAREEDPYMDTTLKACPPV
370 380 390 400 410 420
430 440 450 460 470 480
pF1KE6 SMDVCALRIQLFIGLKAICHFKNHIILLTKAEPEAIPERRQSPKRLLSRKDTSVKIKIPP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_115 SMDVCALRIQLFIGLKAICHFKNHIILLTKAEPEAIPERRQSPKRLLSRKDTSVKIKIPP
430 440 450 460 470 480
490 500 510 520 530 540
pF1KE6 VAEAGWNLYIVNTISPVQLYKEMVDYSNTYKTVKTQSCIHLLSEAHLLVRAALMDASQLE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_115 VAEAGWNLYIVNTISPVQLYKEMVDYSNTYKTVKTQSCIHLLSEAHLLVRAALMDASQLE
490 500 510 520 530 540
550 560 570 580 590 600
pF1KE6 PGEKAELLEAFKESCGHLGDCYSRLDSQHSHLTLPYYKMSGLSMAEVLARTDWTVEDGLQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_115 PGEKAELLEAFKESCGHLGDCYSRLDSQHSHLTLPYYKMSGLSMAEVLARTDWTVEDGLQ
550 560 570 580 590 600
610 620 630 640 650 660
pF1KE6 KYERGLIFYINHSLYENLDEELNEELAAKVVQMFYVAEPKQVPHILCSPSMKNINPLTAM
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_115 KYERGLIFYINHSLYENLDEELNEELAAKVVQMFYVAEPKQVPHILCSPSMKNINPLTAM
610 620 630 640 650 660
670 680 690 700 710 720
pF1KE6 SYLRKLDTSGFSSILVTLTKAAVALKMGDLDMHRNEMKSHSEMKLVCGFILEPRLLIQQR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_115 SYLRKLDTSGFSSILVTLTKAAVALKMGDLDMHRNEMKSHSEMKLVCGFILEPRLLIQQR
670 680 690 700 710 720
730 740 750 760 770 780
pF1KE6 KGQIVPTELALHLKETQPGLLVASVLGLQKNNKIGIEEADSFFKVLCAKDEDTIPQLLVD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_115 KGQIVPTELALHLKETQPGLLVASVLGLQKNNKIGIEEADSFFKVLCAKDEDTIPQLLVD
730 740 750 760 770 780
790 800 810 820 830 840
pF1KE6 FWEAQLVACLPDVVLQELFFKLTSQYIWRLSKRQPPDTTPLRTSEDLINACSHYGLIYPW
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_115 FWEAQLVACLPDVVLQELFFKLTSQYIWRLSKRQPPDTTPLRTSEDLINACSHYGLIYPW
790 800 810 820 830 840
850 860 870 880 890 900
pF1KE6 VHVVISSDSLADKNYTEDLSKLQSLICGPSFDIASIIPFLEPLSEDTIAGLSVHVLCRTR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_115 VHVVISSDSLADKNYTEDLSKLQSLICGPSFDIASIIPFLEPLSEDTIAGLSVHVLCRTR
850 860 870 880 890 900
910 920 930 940 950 960
pF1KE6 LKEYEQCIDILLERCPEAVIPYANHELKEENRTLWWKKLLPELCQRIKCGGEKYQLYLSS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_115 LKEYEQCIDILLERCPEAVIPYANHELKEENRTLWWKKLLPELCQRIKCGGEKYQLYLSS
910 920 930 940 950 960
970 980 990 1000
pF1KE6 LKETLSIVAVELELKDFMNVLPEDGTATFFLPYLLYCSRKKPLT
::::::::::::::::::::::::::::::::::::::::::::
NP_115 LKETLSIVAVELELKDFMNVLPEDGTATFFLPYLLYCSRKKPLT
970 980 990 1000
>>XP_016862812 (OMIM: 606118,614072) PREDICTED: Hermansk (963 aa)
initn: 6391 init1: 6391 opt: 6391 Z-score: 7899.6 bits: 1473.1 E(85289): 0
Smith-Waterman score: 6391; 100.0% identity (100.0% similar) in 962 aa overlap (1-962:1-962)
10 20 30 40 50 60
pF1KE6 MVQLYNLHPFGSQQVVPCKLEPDRFCGGGRDALFVAAGCKVEAFAVAGQELCQPRCAFST
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 MVQLYNLHPFGSQQVVPCKLEPDRFCGGGRDALFVAAGCKVEAFAVAGQELCQPRCAFST
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE6 LGRVLRLAYSEAGDYLVAIEEKNKATFLRAYVNWRNKRTENSRVCIRMIGHNVEGPFSKA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 LGRVLRLAYSEAGDYLVAIEEKNKATFLRAYVNWRNKRTENSRVCIRMIGHNVEGPFSKA
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE6 FRDQMYIIEMPLSEAPLCISCCPVKGDLLVGCTNKLVLFSLKYQIINEEFSLLDFERSLI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 FRDQMYIIEMPLSEAPLCISCCPVKGDLLVGCTNKLVLFSLKYQIINEEFSLLDFERSLI
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE6 IHIDNITPVEVSFCVGYVAVMSDLEVLIVKLESGPKNGERVHHHPHKTNNRIRRTEEGIS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 IHIDNITPVEVSFCVGYVAVMSDLEVLIVKLESGPKNGERVHHHPHKTNNRIRRTEEGIS
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE6 NEISQLESDDFVICQKPLELLGEKSEQSGLSVTLESTGLADEKRKYSHFQHLLYRRFAPD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 NEISQLESDDFVICQKPLELLGEKSEQSGLSVTLESTGLADEKRKYSHFQHLLYRRFAPD
250 260 270 280 290 300
310 320 330 340 350 360
pF1KE6 ISSYVLSDDIKLHSLQLLPIYQTGSLTSDGKNLSQEKELLSLFCFFSLPHVGYLYMVVKS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 ISSYVLSDDIKLHSLQLLPIYQTGSLTSDGKNLSQEKELLSLFCFFSLPHVGYLYMVVKS
310 320 330 340 350 360
370 380 390 400 410 420
pF1KE6 VELMSVYQYPEKSQQAVLTPQFLHVITSNNLQCFTVRCSAAAAREEDPYMDTTLKACPPV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 VELMSVYQYPEKSQQAVLTPQFLHVITSNNLQCFTVRCSAAAAREEDPYMDTTLKACPPV
370 380 390 400 410 420
430 440 450 460 470 480
pF1KE6 SMDVCALRIQLFIGLKAICHFKNHIILLTKAEPEAIPERRQSPKRLLSRKDTSVKIKIPP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 SMDVCALRIQLFIGLKAICHFKNHIILLTKAEPEAIPERRQSPKRLLSRKDTSVKIKIPP
430 440 450 460 470 480
490 500 510 520 530 540
pF1KE6 VAEAGWNLYIVNTISPVQLYKEMVDYSNTYKTVKTQSCIHLLSEAHLLVRAALMDASQLE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 VAEAGWNLYIVNTISPVQLYKEMVDYSNTYKTVKTQSCIHLLSEAHLLVRAALMDASQLE
490 500 510 520 530 540
550 560 570 580 590 600
pF1KE6 PGEKAELLEAFKESCGHLGDCYSRLDSQHSHLTLPYYKMSGLSMAEVLARTDWTVEDGLQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 PGEKAELLEAFKESCGHLGDCYSRLDSQHSHLTLPYYKMSGLSMAEVLARTDWTVEDGLQ
550 560 570 580 590 600
610 620 630 640 650 660
pF1KE6 KYERGLIFYINHSLYENLDEELNEELAAKVVQMFYVAEPKQVPHILCSPSMKNINPLTAM
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 KYERGLIFYINHSLYENLDEELNEELAAKVVQMFYVAEPKQVPHILCSPSMKNINPLTAM
610 620 630 640 650 660
670 680 690 700 710 720
pF1KE6 SYLRKLDTSGFSSILVTLTKAAVALKMGDLDMHRNEMKSHSEMKLVCGFILEPRLLIQQR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 SYLRKLDTSGFSSILVTLTKAAVALKMGDLDMHRNEMKSHSEMKLVCGFILEPRLLIQQR
670 680 690 700 710 720
730 740 750 760 770 780
pF1KE6 KGQIVPTELALHLKETQPGLLVASVLGLQKNNKIGIEEADSFFKVLCAKDEDTIPQLLVD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 KGQIVPTELALHLKETQPGLLVASVLGLQKNNKIGIEEADSFFKVLCAKDEDTIPQLLVD
730 740 750 760 770 780
790 800 810 820 830 840
pF1KE6 FWEAQLVACLPDVVLQELFFKLTSQYIWRLSKRQPPDTTPLRTSEDLINACSHYGLIYPW
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 FWEAQLVACLPDVVLQELFFKLTSQYIWRLSKRQPPDTTPLRTSEDLINACSHYGLIYPW
790 800 810 820 830 840
850 860 870 880 890 900
pF1KE6 VHVVISSDSLADKNYTEDLSKLQSLICGPSFDIASIIPFLEPLSEDTIAGLSVHVLCRTR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 VHVVISSDSLADKNYTEDLSKLQSLICGPSFDIASIIPFLEPLSEDTIAGLSVHVLCRTR
850 860 870 880 890 900
910 920 930 940 950 960
pF1KE6 LKEYEQCIDILLERCPEAVIPYANHELKEENRTLWWKKLLPELCQRIKCGGEKYQLYLSS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 LKEYEQCIDILLERCPEAVIPYANHELKEENRTLWWKKLLPELCQRIKCGGEKYQLYLSS
910 920 930 940 950 960
970 980 990 1000
pF1KE6 LKETLSIVAVELELKDFMNVLPEDGTATFFLPYLLYCSRKKPLT
::
XP_016 LKA
>>NP_001295187 (OMIM: 606118,614072) Hermansky-Pudlak sy (839 aa)
initn: 5064 init1: 5064 opt: 5064 Z-score: 6258.4 bits: 1169.3 E(85289): 0
Smith-Waterman score: 5214; 83.6% identity (83.6% similar) in 1004 aa overlap (1-1004:1-839)
10 20 30 40 50 60
pF1KE6 MVQLYNLHPFGSQQVVPCKLEPDRFCGGGRDALFVAAGCKVEAFAVAGQELCQPRCAFST
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MVQLYNLHPFGSQQVVPCKLEPDRFCGGGRDALFVAAGCKVEAFAVAGQELCQPRCAFST
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE6 LGRVLRLAYSEAGDYLVAIEEKNKATFLRAYVNWRNKRTENSRVCIRMIGHNVEGPFSKA
:::::::::::::
NP_001 LGRVLRLAYSEAG-----------------------------------------------
70
130 140 150 160 170 180
pF1KE6 FRDQMYIIEMPLSEAPLCISCCPVKGDLLVGCTNKLVLFSLKYQIINEEFSLLDFERSLI
NP_001 ------------------------------------------------------------
190 200 210 220 230 240
pF1KE6 IHIDNITPVEVSFCVGYVAVMSDLEVLIVKLESGPKNGERVHHHPHKTNNRIRRTEEGIS
::
NP_001 ----------------------------------------------------------IS
250 260 270 280 290 300
pF1KE6 NEISQLESDDFVICQKPLELLGEKSEQSGLSVTLESTGLADEKRKYSHFQHLLYRRFAPD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 NEISQLESDDFVICQKPLELLGEKSEQSGLSVTLESTGLADEKRKYSHFQHLLYRRFAPD
80 90 100 110 120 130
310 320 330 340 350 360
pF1KE6 ISSYVLSDDIKLHSLQLLPIYQTGSLTSDGKNLSQEKELLSLFCFFSLPHVGYLYMVVKS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 ISSYVLSDDIKLHSLQLLPIYQTGSLTSDGKNLSQEKELLSLFCFFSLPHVGYLYMVVKS
140 150 160 170 180 190
370 380 390 400 410 420
pF1KE6 VELMSVYQYPEKSQQAVLTPQFLHVITSNNLQCFTVRCSAAAAREEDPYMDTTLKACPPV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 VELMSVYQYPEKSQQAVLTPQFLHVITSNNLQCFTVRCSAAAAREEDPYMDTTLKACPPV
200 210 220 230 240 250
430 440 450 460 470 480
pF1KE6 SMDVCALRIQLFIGLKAICHFKNHIILLTKAEPEAIPERRQSPKRLLSRKDTSVKIKIPP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 SMDVCALRIQLFIGLKAICHFKNHIILLTKAEPEAIPERRQSPKRLLSRKDTSVKIKIPP
260 270 280 290 300 310
490 500 510 520 530 540
pF1KE6 VAEAGWNLYIVNTISPVQLYKEMVDYSNTYKTVKTQSCIHLLSEAHLLVRAALMDASQLE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 VAEAGWNLYIVNTISPVQLYKEMVDYSNTYKTVKTQSCIHLLSEAHLLVRAALMDASQLE
320 330 340 350 360 370
550 560 570 580 590 600
pF1KE6 PGEKAELLEAFKESCGHLGDCYSRLDSQHSHLTLPYYKMSGLSMAEVLARTDWTVEDGLQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 PGEKAELLEAFKESCGHLGDCYSRLDSQHSHLTLPYYKMSGLSMAEVLARTDWTVEDGLQ
380 390 400 410 420 430
610 620 630 640 650 660
pF1KE6 KYERGLIFYINHSLYENLDEELNEELAAKVVQMFYVAEPKQVPHILCSPSMKNINPLTAM
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 KYERGLIFYINHSLYENLDEELNEELAAKVVQMFYVAEPKQVPHILCSPSMKNINPLTAM
440 450 460 470 480 490
670 680 690 700 710 720
pF1KE6 SYLRKLDTSGFSSILVTLTKAAVALKMGDLDMHRNEMKSHSEMKLVCGFILEPRLLIQQR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 SYLRKLDTSGFSSILVTLTKAAVALKMGDLDMHRNEMKSHSEMKLVCGFILEPRLLIQQR
500 510 520 530 540 550
730 740 750 760 770 780
pF1KE6 KGQIVPTELALHLKETQPGLLVASVLGLQKNNKIGIEEADSFFKVLCAKDEDTIPQLLVD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 KGQIVPTELALHLKETQPGLLVASVLGLQKNNKIGIEEADSFFKVLCAKDEDTIPQLLVD
560 570 580 590 600 610
790 800 810 820 830 840
pF1KE6 FWEAQLVACLPDVVLQELFFKLTSQYIWRLSKRQPPDTTPLRTSEDLINACSHYGLIYPW
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 FWEAQLVACLPDVVLQELFFKLTSQYIWRLSKRQPPDTTPLRTSEDLINACSHYGLIYPW
620 630 640 650 660 670
850 860 870 880 890 900
pF1KE6 VHVVISSDSLADKNYTEDLSKLQSLICGPSFDIASIIPFLEPLSEDTIAGLSVHVLCRTR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 VHVVISSDSLADKNYTEDLSKLQSLICGPSFDIASIIPFLEPLSEDTIAGLSVHVLCRTR
680 690 700 710 720 730
910 920 930 940 950 960
pF1KE6 LKEYEQCIDILLERCPEAVIPYANHELKEENRTLWWKKLLPELCQRIKCGGEKYQLYLSS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 LKEYEQCIDILLERCPEAVIPYANHELKEENRTLWWKKLLPELCQRIKCGGEKYQLYLSS
740 750 760 770 780 790
970 980 990 1000
pF1KE6 LKETLSIVAVELELKDFMNVLPEDGTATFFLPYLLYCSRKKPLT
::::::::::::::::::::::::::::::::::::::::::::
NP_001 LKETLSIVAVELELKDFMNVLPEDGTATFFLPYLLYCSRKKPLT
800 810 820 830
>>XP_005247891 (OMIM: 606118,614072) PREDICTED: Hermansk (763 aa)
initn: 5033 init1: 5033 opt: 5033 Z-score: 6220.7 bits: 1162.2 E(85289): 0
Smith-Waterman score: 5033; 100.0% identity (100.0% similar) in 763 aa overlap (1-763:1-763)
10 20 30 40 50 60
pF1KE6 MVQLYNLHPFGSQQVVPCKLEPDRFCGGGRDALFVAAGCKVEAFAVAGQELCQPRCAFST
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 MVQLYNLHPFGSQQVVPCKLEPDRFCGGGRDALFVAAGCKVEAFAVAGQELCQPRCAFST
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE6 LGRVLRLAYSEAGDYLVAIEEKNKATFLRAYVNWRNKRTENSRVCIRMIGHNVEGPFSKA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 LGRVLRLAYSEAGDYLVAIEEKNKATFLRAYVNWRNKRTENSRVCIRMIGHNVEGPFSKA
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE6 FRDQMYIIEMPLSEAPLCISCCPVKGDLLVGCTNKLVLFSLKYQIINEEFSLLDFERSLI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 FRDQMYIIEMPLSEAPLCISCCPVKGDLLVGCTNKLVLFSLKYQIINEEFSLLDFERSLI
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE6 IHIDNITPVEVSFCVGYVAVMSDLEVLIVKLESGPKNGERVHHHPHKTNNRIRRTEEGIS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 IHIDNITPVEVSFCVGYVAVMSDLEVLIVKLESGPKNGERVHHHPHKTNNRIRRTEEGIS
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE6 NEISQLESDDFVICQKPLELLGEKSEQSGLSVTLESTGLADEKRKYSHFQHLLYRRFAPD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 NEISQLESDDFVICQKPLELLGEKSEQSGLSVTLESTGLADEKRKYSHFQHLLYRRFAPD
250 260 270 280 290 300
310 320 330 340 350 360
pF1KE6 ISSYVLSDDIKLHSLQLLPIYQTGSLTSDGKNLSQEKELLSLFCFFSLPHVGYLYMVVKS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 ISSYVLSDDIKLHSLQLLPIYQTGSLTSDGKNLSQEKELLSLFCFFSLPHVGYLYMVVKS
310 320 330 340 350 360
370 380 390 400 410 420
pF1KE6 VELMSVYQYPEKSQQAVLTPQFLHVITSNNLQCFTVRCSAAAAREEDPYMDTTLKACPPV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 VELMSVYQYPEKSQQAVLTPQFLHVITSNNLQCFTVRCSAAAAREEDPYMDTTLKACPPV
370 380 390 400 410 420
430 440 450 460 470 480
pF1KE6 SMDVCALRIQLFIGLKAICHFKNHIILLTKAEPEAIPERRQSPKRLLSRKDTSVKIKIPP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 SMDVCALRIQLFIGLKAICHFKNHIILLTKAEPEAIPERRQSPKRLLSRKDTSVKIKIPP
430 440 450 460 470 480
490 500 510 520 530 540
pF1KE6 VAEAGWNLYIVNTISPVQLYKEMVDYSNTYKTVKTQSCIHLLSEAHLLVRAALMDASQLE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 VAEAGWNLYIVNTISPVQLYKEMVDYSNTYKTVKTQSCIHLLSEAHLLVRAALMDASQLE
490 500 510 520 530 540
550 560 570 580 590 600
pF1KE6 PGEKAELLEAFKESCGHLGDCYSRLDSQHSHLTLPYYKMSGLSMAEVLARTDWTVEDGLQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 PGEKAELLEAFKESCGHLGDCYSRLDSQHSHLTLPYYKMSGLSMAEVLARTDWTVEDGLQ
550 560 570 580 590 600
610 620 630 640 650 660
pF1KE6 KYERGLIFYINHSLYENLDEELNEELAAKVVQMFYVAEPKQVPHILCSPSMKNINPLTAM
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 KYERGLIFYINHSLYENLDEELNEELAAKVVQMFYVAEPKQVPHILCSPSMKNINPLTAM
610 620 630 640 650 660
670 680 690 700 710 720
pF1KE6 SYLRKLDTSGFSSILVTLTKAAVALKMGDLDMHRNEMKSHSEMKLVCGFILEPRLLIQQR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 SYLRKLDTSGFSSILVTLTKAAVALKMGDLDMHRNEMKSHSEMKLVCGFILEPRLLIQQR
670 680 690 700 710 720
730 740 750 760 770 780
pF1KE6 KGQIVPTELALHLKETQPGLLVASVLGLQKNNKIGIEEADSFFKVLCAKDEDTIPQLLVD
:::::::::::::::::::::::::::::::::::::::::::
XP_005 KGQIVPTELALHLKETQPGLLVASVLGLQKNNKIGIEEADSFF
730 740 750 760
790 800 810 820 830 840
pF1KE6 FWEAQLVACLPDVVLQELFFKLTSQYIWRLSKRQPPDTTPLRTSEDLINACSHYGLIYPW
1004 residues in 1 query sequences
60827320 residues in 85289 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Tue Nov 8 15:33:08 2016 done: Tue Nov 8 15:33:09 2016
Total Scan time: 8.430 Total Display time: 0.070
Function used was FASTA [36.3.4 Apr, 2011]