Result of FASTA (omim) for
pFN21AE6692
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KE6692, 329 aa
1>>>pF1KE6692 329 - 329 aa - 329 aa
Library: /omim/omim.rfq.tfa
60827320 residues in 85289 sequences
Statistics: Expectation_n fit: rho(ln(x))= 5.3547+/-0.000266; mu= 17.8884+/- 0.017
mean_var=87.0033+/-17.500, 0's: 0 Z-trim(121.2): 75 B-trim: 1916 in 1/54
Lambda= 0.137501
statistics sampled from 37387 (37463) to 37387 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.763), E-opt: 0.2 (0.439), width: 16
Scan time: 7.440
The best scores are: opt bits E(85289)
NP_542172 (OMIM: 271640,615291,615349) beta-1,3-ga ( 329) 2257 456.8 2.9e-128
NP_689703 (OMIM: 610194,615181) UDP-GalNAc:beta-1, ( 500) 296 67.9 5e-11
XP_016855883 (OMIM: 610194,615181) PREDICTED: UDP- ( 541) 296 67.9 5.3e-11
XP_011525236 (OMIM: 615357) PREDICTED: UDP-GlcNAc: ( 397) 290 66.6 9.7e-11
NP_940942 (OMIM: 615357) UDP-GlcNAc:betaGal beta-1 ( 397) 290 66.6 9.7e-11
XP_006711812 (OMIM: 610194,615181) PREDICTED: UDP- ( 586) 286 66.0 2.2e-10
XP_011525928 (OMIM: 605863) PREDICTED: N-acetyllac ( 372) 276 63.8 6.3e-10
NP_055071 (OMIM: 605863) N-acetyllactosaminide bet ( 372) 276 63.8 6.3e-10
XP_005247010 (OMIM: 615313) PREDICTED: UDP-GlcNAc: ( 328) 274 63.4 7.6e-10
NP_660279 (OMIM: 615313) UDP-GlcNAc:betaGal beta-1 ( 401) 274 63.5 8.8e-10
XP_016883718 (OMIM: 604066) PREDICTED: beta-1,3-ga ( 310) 264 61.4 2.9e-09
XP_016883716 (OMIM: 604066) PREDICTED: beta-1,3-ga ( 310) 264 61.4 2.9e-09
XP_016883723 (OMIM: 604066) PREDICTED: beta-1,3-ga ( 310) 264 61.4 2.9e-09
XP_016883727 (OMIM: 604066) PREDICTED: beta-1,3-ga ( 310) 264 61.4 2.9e-09
XP_016883725 (OMIM: 604066) PREDICTED: beta-1,3-ga ( 310) 264 61.4 2.9e-09
NP_006048 (OMIM: 604066) beta-1,3-galactosyltransf ( 310) 264 61.4 2.9e-09
XP_016883730 (OMIM: 604066) PREDICTED: beta-1,3-ga ( 310) 264 61.4 2.9e-09
XP_016883717 (OMIM: 604066) PREDICTED: beta-1,3-ga ( 310) 264 61.4 2.9e-09
NP_149360 (OMIM: 604066) beta-1,3-galactosyltransf ( 310) 264 61.4 2.9e-09
XP_016883719 (OMIM: 604066) PREDICTED: beta-1,3-ga ( 310) 264 61.4 2.9e-09
XP_016883720 (OMIM: 604066) PREDICTED: beta-1,3-ga ( 310) 264 61.4 2.9e-09
XP_016883728 (OMIM: 604066) PREDICTED: beta-1,3-ga ( 310) 264 61.4 2.9e-09
XP_016883722 (OMIM: 604066) PREDICTED: beta-1,3-ga ( 310) 264 61.4 2.9e-09
NP_001265579 (OMIM: 604066) beta-1,3-galactosyltra ( 310) 264 61.4 2.9e-09
XP_016883721 (OMIM: 604066) PREDICTED: beta-1,3-ga ( 310) 264 61.4 2.9e-09
XP_016883724 (OMIM: 604066) PREDICTED: beta-1,3-ga ( 310) 264 61.4 2.9e-09
XP_016883726 (OMIM: 604066) PREDICTED: beta-1,3-ga ( 310) 264 61.4 2.9e-09
NP_149361 (OMIM: 604066) beta-1,3-galactosyltransf ( 310) 264 61.4 2.9e-09
XP_016883729 (OMIM: 604066) PREDICTED: beta-1,3-ga ( 310) 264 61.4 2.9e-09
NP_149362 (OMIM: 604066) beta-1,3-galactosyltransf ( 314) 264 61.4 2.9e-09
NP_066191 (OMIM: 603093) beta-1,3-galactosyltransf ( 326) 257 60.0 7.8e-09
XP_006712882 (OMIM: 603093) PREDICTED: beta-1,3-ga ( 326) 257 60.0 7.8e-09
XP_005246988 (OMIM: 603093) PREDICTED: beta-1,3-ga ( 326) 257 60.0 7.8e-09
XP_011510387 (OMIM: 603093) PREDICTED: beta-1,3-ga ( 326) 257 60.0 7.8e-09
NP_003774 (OMIM: 603018) beta-1,3-galactosyltransf ( 422) 251 58.9 2.2e-08
NP_619651 (OMIM: 615315) acetylgalactosaminyl-O-gl ( 384) 249 58.5 2.7e-08
NP_003773 (OMIM: 603095) beta-1,3-galactosyltransf ( 378) 236 55.9 1.6e-07
NP_001317421 (OMIM: 605864) N-acetyllactosaminide ( 353) 218 52.3 1.8e-06
NP_110392 (OMIM: 605864) N-acetyllactosaminide bet ( 378) 218 52.3 1.9e-06
NP_001306004 (OMIM: 605581) N-acetyllactosaminide ( 397) 216 52.0 2.5e-06
NP_006568 (OMIM: 605581) N-acetyllactosaminide bet ( 397) 216 52.0 2.5e-06
NP_149359 (OMIM: 111400,603094,615021) UDP-GalNAc: ( 331) 211 50.9 4.4e-06
XP_005247921 (OMIM: 111400,603094,615021) PREDICTE ( 331) 211 50.9 4.4e-06
XP_006713866 (OMIM: 111400,603094,615021) PREDICTE ( 331) 211 50.9 4.4e-06
XP_006713868 (OMIM: 111400,603094,615021) PREDICTE ( 331) 211 50.9 4.4e-06
XP_016862894 (OMIM: 111400,603094,615021) PREDICTE ( 331) 211 50.9 4.4e-06
XP_016862897 (OMIM: 111400,603094,615021) PREDICTE ( 331) 211 50.9 4.4e-06
XP_005247916 (OMIM: 111400,603094,615021) PREDICTE ( 331) 211 50.9 4.4e-06
XP_016862898 (OMIM: 111400,603094,615021) PREDICTE ( 331) 211 50.9 4.4e-06
XP_005247918 (OMIM: 111400,603094,615021) PREDICTE ( 331) 211 50.9 4.4e-06
>>NP_542172 (OMIM: 271640,615291,615349) beta-1,3-galact (329 aa)
initn: 2257 init1: 2257 opt: 2257 Z-score: 2423.7 bits: 456.8 E(85289): 2.9e-128
Smith-Waterman score: 2257; 100.0% identity (100.0% similar) in 329 aa overlap (1-329:1-329)
10 20 30 40 50 60
pF1KE6 MKLLRRAWRRRAALGLGTLALCGAALLYLARCAAEPGDPRAMSGRSPPPPAPARAAAFLA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_542 MKLLRRAWRRRAALGLGTLALCGAALLYLARCAAEPGDPRAMSGRSPPPPAPARAAAFLA
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE6 VLVASAPRAAERRSVIRSTWLARRGAPGDVWARFAVGTAGLGAEERRALEREQARHGDLL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_542 VLVASAPRAAERRSVIRSTWLARRGAPGDVWARFAVGTAGLGAEERRALEREQARHGDLL
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE6 LLPALRDAYENLTAKVLAMLAWLDEHVAFEFVLKADDDSFARLDALLAELRAREPARRRR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_542 LLPALRDAYENLTAKVLAMLAWLDEHVAFEFVLKADDDSFARLDALLAELRAREPARRRR
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE6 LYWGFFSGRGRVKPGGRWREAAWQLCDYYLPYALGGGYVLSADLVHYLRLSRDYLRAWHS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_542 LYWGFFSGRGRVKPGGRWREAAWQLCDYYLPYALGGGYVLSADLVHYLRLSRDYLRAWHS
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE6 EDVSLGAWLAPVDVQREHDPRFDTEYRSRGCSNQYLVTHKQSLEDMLEKHATLAREGRLC
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_542 EDVSLGAWLAPVDVQREHDPRFDTEYRSRGCSNQYLVTHKQSLEDMLEKHATLAREGRLC
250 260 270 280 290 300
310 320
pF1KE6 KREVQLRLSYVYDWSAPPSQCCQRREGIP
:::::::::::::::::::::::::::::
NP_542 KREVQLRLSYVYDWSAPPSQCCQRREGIP
310 320
>>NP_689703 (OMIM: 610194,615181) UDP-GalNAc:beta-1,3-N- (500 aa)
initn: 298 init1: 125 opt: 296 Z-score: 318.9 bits: 67.9 E(85289): 5e-11
Smith-Waterman score: 296; 28.3% identity (59.6% similar) in 198 aa overlap (104-301:305-496)
80 90 100 110 120 130
pF1KE6 SVIRSTWLARRGAPGDVWARFAVGTAGLGAEERRALEREQARHGDLLLLPALRDAYENLT
:: :..:.. . :.... .. :.:.:.
NP_689 FIYTIQEGDALLHNLHSRPQRLIDHIRNLHEEDALLKEESSIYDDIVFVDVV-DTYRNVP
280 290 300 310 320 330
140 150 160 170 180 190
pF1KE6 AKVLAMLAWLDEHVAFEFVLKADDDSFARLDALLAELRAREPARRRRLYWGFFSGRGRVK
::.: . : : ..:...::.::: . :.:.. .. ... ..:: : :
NP_689 AKLLNFYRWTVETTSFNLLLKTDDDCYIDLEAVFNRI-VQKNLDGPNFWWGNFRLNWAVD
340 350 360 370 380 390
200 210 220 230 240 250
pF1KE6 PGGRWREAAWQLCDYYLPYALGGGYVLSADLVHYLRLSRDYLRAWHSEDVSLGAWLAPVD
:.:.: . : .: :.:::.: :.:..: . :.....::::.: :.: .
NP_689 RTGKWQELEYP-SPAYPAFACGSGYVISKDIVKWLASNSGRLKTYQGEDVSMGIWMAAIG
400 410 420 430 440 450
260 270 280 290 300 310
pF1KE6 VQREHDPRFDTEYRSRGCSNQYLVTHKQSLEDMLEKHATLAREGRLCKREVQLRLSYVYD
.: .: . : . : . .: . . : .. : : : :.
NP_689 PKRYQDSLWLCE---KTCETGMLSSPQYSPWELTELWKLKERCGDPCRCQAR
460 470 480 490 500
320
pF1KE6 WSAPPSQCCQRREGIP
>>XP_016855883 (OMIM: 610194,615181) PREDICTED: UDP-GalN (541 aa)
initn: 277 init1: 125 opt: 296 Z-score: 318.4 bits: 67.9 E(85289): 5.3e-11
Smith-Waterman score: 296; 28.3% identity (59.6% similar) in 198 aa overlap (104-301:346-537)
80 90 100 110 120 130
pF1KE6 SVIRSTWLARRGAPGDVWARFAVGTAGLGAEERRALEREQARHGDLLLLPALRDAYENLT
:: :..:.. . :.... .. :.:.:.
XP_016 FIYTIQEGDALLHNLHSRPQRLIDHIRNLHEEDALLKEESSIYDDIVFVDVV-DTYRNVP
320 330 340 350 360 370
140 150 160 170 180 190
pF1KE6 AKVLAMLAWLDEHVAFEFVLKADDDSFARLDALLAELRAREPARRRRLYWGFFSGRGRVK
::.: . : : ..:...::.::: . :.:.. .. ... ..:: : :
XP_016 AKLLNFYRWTVETTSFNLLLKTDDDCYIDLEAVFNRI-VQKNLDGPNFWWGNFRLNWAVD
380 390 400 410 420 430
200 210 220 230 240 250
pF1KE6 PGGRWREAAWQLCDYYLPYALGGGYVLSADLVHYLRLSRDYLRAWHSEDVSLGAWLAPVD
:.:.: . : .: :.:::.: :.:..: . :.....::::.: :.: .
XP_016 RTGKWQELEYP-SPAYPAFACGSGYVISKDIVKWLASNSGRLKTYQGEDVSMGIWMAAIG
440 450 460 470 480 490
260 270 280 290 300 310
pF1KE6 VQREHDPRFDTEYRSRGCSNQYLVTHKQSLEDMLEKHATLAREGRLCKREVQLRLSYVYD
.: .: . : . : . .: . . : .. : : : :.
XP_016 PKRYQDSLWLCE---KTCETGMLSSPQYSPWELTELWKLKERCGDPCRCQAR
500 510 520 530 540
320
pF1KE6 WSAPPSQCCQRREGIP
>>XP_011525236 (OMIM: 615357) PREDICTED: UDP-GlcNAc:beta (397 aa)
initn: 272 init1: 120 opt: 290 Z-score: 313.8 bits: 66.6 E(85289): 9.7e-11
Smith-Waterman score: 290; 33.1% identity (51.7% similar) in 269 aa overlap (6-266:95-358)
10 20 30
pF1KE6 MKLLRRAWRRRAALGLGTLALCGAALLYLARCAAE
.:: :: . .: : . ::
XP_011 TIPLPFAYWNQQQWRLGSLPSGDSTETGGCQAWGAAAATEIPDFASYPKDLRRFLLSAAC
70 80 90 100 110 120
40 50 60 70 80 90
pF1KE6 PGDPRAM--SGRSPPPPAPARAAAFLAVLVASAP-RAAERRSVIRSTWLARRGAPGDVWA
. :. . .: : . .: . : : : : :::..: : :: . ::: .
XP_011 RSFPQWLPGGGGSQVSSCSDTDVPYLLLAVKSEPGRFAERQAV-RETWGS--PAPG-IRL
130 140 150 160 170 180
100 110 120 130 140
pF1KE6 RFAVGT-AG-LGAEERRALEREQARHGDLLLLPALRDAYENLTAKVLAMLAWLDEHV-AF
: .:. .: : . . :. :..:::: : :. : : : : .:::: .: .
XP_011 LFLLGSPVGEAGPDLDSLVAWESRRYSDLLLWDFL-DVPFNQTLKDLLLLAWLGRHCPTV
190 200 210 220 230
150 160 170 180 190 200
pF1KE6 EFVLKADDDSFARLDALLAELRAREPARRRRLYWG--FFSGRGRVKPGGRWREAAWQLCD
:::.:.::.:.. ::::.::: :: : :: : : .. :::: . .
XP_011 SFVLRAQDDAFVHTPALLAHLRALPPASARSLYLGEVFTQAMPLRKPGGPFYVPESFFEG
240 250 260 270 280 290
210 220 230 240 250 260
pF1KE6 YYLPYALGGGYVLSADLVHYLRLSRDYLRAWHSEDVSLGAWLAPVDVQREHDPRFDTEYR
: :: :::::... :. .: . . . ::: : . . . . : : : .
XP_011 GYPAYASGGGYVIAGRLAPWLLRAAARVAPFPFEDVYTGLCIRALGLVPQAHPGFLTAWP
300 310 320 330 340 350
270 280 290 300 310 320
pF1KE6 SRGCSNQYLVTHKQSLEDMLEKHATLAREGRLCKREVQLRLSYVYDWSAPPSQCCQRREG
XP_011 ADRTADHCAFRNLLLVRPLGPQASIRLWKQLQDPRLQC
360 370 380 390
>>NP_940942 (OMIM: 615357) UDP-GlcNAc:betaGal beta-1,3-N (397 aa)
initn: 272 init1: 120 opt: 290 Z-score: 313.8 bits: 66.6 E(85289): 9.7e-11
Smith-Waterman score: 290; 33.1% identity (51.7% similar) in 269 aa overlap (6-266:95-358)
10 20 30
pF1KE6 MKLLRRAWRRRAALGLGTLALCGAALLYLARCAAE
.:: :: . .: : . ::
NP_940 TIPLPFAYWNQQQWRLGSLPSGDSTETGGCQAWGAAAATEIPDFASYPKDLRRFLLSAAC
70 80 90 100 110 120
40 50 60 70 80 90
pF1KE6 PGDPRAM--SGRSPPPPAPARAAAFLAVLVASAP-RAAERRSVIRSTWLARRGAPGDVWA
. :. . .: : . .: . : : : : :::..: : :: . ::: .
NP_940 RSFPQWLPGGGGSQVSSCSDTDVPYLLLAVKSEPGRFAERQAV-RETWGS--PAPG-IRL
130 140 150 160 170 180
100 110 120 130 140
pF1KE6 RFAVGT-AG-LGAEERRALEREQARHGDLLLLPALRDAYENLTAKVLAMLAWLDEHV-AF
: .:. .: : . . :. :..:::: : :. : : : : .:::: .: .
NP_940 LFLLGSPVGEAGPDLDSLVAWESRRYSDLLLWDFL-DVPFNQTLKDLLLLAWLGRHCPTV
190 200 210 220 230
150 160 170 180 190 200
pF1KE6 EFVLKADDDSFARLDALLAELRAREPARRRRLYWG--FFSGRGRVKPGGRWREAAWQLCD
:::.:.::.:.. ::::.::: :: : :: : : .. :::: . .
NP_940 SFVLRAQDDAFVHTPALLAHLRALPPASARSLYLGEVFTQAMPLRKPGGPFYVPESFFEG
240 250 260 270 280 290
210 220 230 240 250 260
pF1KE6 YYLPYALGGGYVLSADLVHYLRLSRDYLRAWHSEDVSLGAWLAPVDVQREHDPRFDTEYR
: :: :::::... :. .: . . . ::: : . . . . : : : .
NP_940 GYPAYASGGGYVIAGRLAPWLLRAAARVAPFPFEDVYTGLCIRALGLVPQAHPGFLTAWP
300 310 320 330 340 350
270 280 290 300 310 320
pF1KE6 SRGCSNQYLVTHKQSLEDMLEKHATLAREGRLCKREVQLRLSYVYDWSAPPSQCCQRREG
NP_940 ADRTADHCAFRNLLLVRPLGPQASIRLWKQLQDPRLQC
360 370 380 390
>>XP_006711812 (OMIM: 610194,615181) PREDICTED: UDP-GalN (586 aa)
initn: 311 init1: 125 opt: 286 Z-score: 307.3 bits: 66.0 E(85289): 2.2e-10
Smith-Waterman score: 286; 28.6% identity (61.6% similar) in 185 aa overlap (104-288:305-483)
80 90 100 110 120 130
pF1KE6 SVIRSTWLARRGAPGDVWARFAVGTAGLGAEERRALEREQARHGDLLLLPALRDAYENLT
:: :..:.. . :.... .. :.:.:.
XP_006 FIYTIQEGDALLHNLHSRPQRLIDHIRNLHEEDALLKEESSIYDDIVFVDVV-DTYRNVP
280 290 300 310 320 330
140 150 160 170 180 190
pF1KE6 AKVLAMLAWLDEHVAFEFVLKADDDSFARLDALLAELRAREPARRRRLYWGFFSGRGRVK
::.: . : : ..:...::.::: . :.:.. .. ... ..:: : :
XP_006 AKLLNFYRWTVETTSFNLLLKTDDDCYIDLEAVFNRI-VQKNLDGPNFWWGNFRLNWAVD
340 350 360 370 380 390
200 210 220 230 240 250
pF1KE6 PGGRWREAAWQLCDYYLPYALGGGYVLSADLVHYLRLSRDYLRAWHSEDVSLGAWLAPVD
:.:.: . : .: :.:::.: :.:..: . :.....::::.: :.: .
XP_006 RTGKWQELEYP-SPAYPAFACGSGYVISKDIVKWLASNSGRLKTYQGEDVSMGIWMAAIG
400 410 420 430 440 450
260 270 280 290 300 310
pF1KE6 VQREHDPRFDTEYRSRGCSNQYLVTHKQSLEDMLEKHATLAREGRLCKREVQLRLSYVYD
.: .: . : . : . .: . . : .. :
XP_006 PKRYQDSLWLCE---KTCETGMLSSPQYSPWELTELWKLKERCPDSKLAREDCLQILQMF
460 470 480 490 500
320
pF1KE6 WSAPPSQCCQRREGIP
XP_006 SPSVTFGNSSLSALTETWCHLRHDPQDTSHVSTRPCSARLGAQYHTANQFLGLDHSLHRR
510 520 530 540 550 560
>>XP_011525928 (OMIM: 605863) PREDICTED: N-acetyllactosa (372 aa)
initn: 233 init1: 105 opt: 276 Z-score: 299.2 bits: 63.8 E(85289): 6.3e-10
Smith-Waterman score: 276; 33.0% identity (56.5% similar) in 209 aa overlap (49-246:99-301)
20 30 40 50 60 70
pF1KE6 LALCGAALLYLARCAAEPGDPRAMSGRSPPPPAPARAAAFLAVLVASAPRAAERRSVIRS
::. .:: ... :.: :: ..:
XP_011 THPDFATQPQHVQNFLLYRHCRHFPLLQDVPPSKCAQPVFLLLVIKSSPSNYVRRELLRR
70 80 90 100 110 120
80 90 100 110 120 130
pF1KE6 TWLARRGAPG-DVWARFAVGTAGLGAEER---RALEREQARHGDLLLLPALRDAYENLTA
:: .: . : .. : ::::. : : : :: : :::.: ..:.. :::
XP_011 TWGRERKVRGLQLRLLFLVGTASNPHEARKVNRLLELEAQTHGDILQWD-FHDSFFNLTL
130 140 150 160 170 180
140 150 160 170 180 190
pF1KE6 KVLAMLAWLDEHVA-FEFVLKADDDSFARLDALLAELRAREPARRRRLYWG-FFSGRGRV
: . .: : . . : :::..::: ::. : .. :. ..:.:. :. : .... : .
XP_011 KQVLFLQWQETRCANASFVLNGDDDVFAHTDNMVFYLQDHDPGRH--LFVGQLIQNVGPI
190 200 210 220 230 240
200 210 220 230 240
pF1KE6 KPGGRWR-----EAAWQLCDYYLPYALGGGYVLSADLVHYLRLSRDYLRAWHSEDVSLGA
. . : :.. : . : :: :::..:: . :: . : . .:: ::
XP_011 R--AFWSKYYVPEVVTQ-NERYPPYCGGGGFLLSRFTAAALRRAAHVLDIFPIDDVFLGM
250 260 270 280 290 300
250 260 270 280 290 300
pF1KE6 WLAPVDVQREHDPRFDTEYRSRGCSNQYLVTHKQSLEDMLEKHATLAREGRLCKREVQLR
XP_011 CLELEGLKPASHSGIRTSGVRAPSQRLSSFDPCFYRDLLLVHRFLPYEMLLMWDALNQPN
310 320 330 340 350 360
>>NP_055071 (OMIM: 605863) N-acetyllactosaminide beta-1, (372 aa)
initn: 233 init1: 105 opt: 276 Z-score: 299.2 bits: 63.8 E(85289): 6.3e-10
Smith-Waterman score: 276; 33.0% identity (56.5% similar) in 209 aa overlap (49-246:99-301)
20 30 40 50 60 70
pF1KE6 LALCGAALLYLARCAAEPGDPRAMSGRSPPPPAPARAAAFLAVLVASAPRAAERRSVIRS
::. .:: ... :.: :: ..:
NP_055 THPDFATQPQHVQNFLLYRHCRHFPLLQDVPPSKCAQPVFLLLVIKSSPSNYVRRELLRR
70 80 90 100 110 120
80 90 100 110 120 130
pF1KE6 TWLARRGAPG-DVWARFAVGTAGLGAEER---RALEREQARHGDLLLLPALRDAYENLTA
:: .: . : .. : ::::. : : : :: : :::.: ..:.. :::
NP_055 TWGRERKVRGLQLRLLFLVGTASNPHEARKVNRLLELEAQTHGDILQWD-FHDSFFNLTL
130 140 150 160 170 180
140 150 160 170 180 190
pF1KE6 KVLAMLAWLDEHVA-FEFVLKADDDSFARLDALLAELRAREPARRRRLYWG-FFSGRGRV
: . .: : . . : :::..::: ::. : .. :. ..:.:. :. : .... : .
NP_055 KQVLFLQWQETRCANASFVLNGDDDVFAHTDNMVFYLQDHDPGRH--LFVGQLIQNVGPI
190 200 210 220 230 240
200 210 220 230 240
pF1KE6 KPGGRWR-----EAAWQLCDYYLPYALGGGYVLSADLVHYLRLSRDYLRAWHSEDVSLGA
. . : :.. : . : :: :::..:: . :: . : . .:: ::
NP_055 R--AFWSKYYVPEVVTQ-NERYPPYCGGGGFLLSRFTAAALRRAAHVLDIFPIDDVFLGM
250 260 270 280 290 300
250 260 270 280 290 300
pF1KE6 WLAPVDVQREHDPRFDTEYRSRGCSNQYLVTHKQSLEDMLEKHATLAREGRLCKREVQLR
NP_055 CLELEGLKPASHSGIRTSGVRAPSQRLSSFDPCFYRDLLLVHRFLPYEMLLMWDALNQPN
310 320 330 340 350 360
>>XP_005247010 (OMIM: 615313) PREDICTED: UDP-GlcNAc:beta (328 aa)
initn: 232 init1: 100 opt: 274 Z-score: 297.7 bits: 63.4 E(85289): 7.6e-10
Smith-Waterman score: 276; 31.7% identity (53.4% similar) in 281 aa overlap (50-306:54-327)
20 30 40 50 60 70
pF1KE6 ALCGAALLYLARCAAEPGDPRAMSGRSPPPPAPARAAAFLAVLVASAPRAAERRSVIRST
: :. ..: :.: :. .:: .::.:
XP_005 HQPWFQVLEPQFRQFLFYRHCRYFPMLLNHPEKCRGDVYLLVVVKSVITQHDRREAIRQT
30 40 50 60 70 80
80 90 100 110 120 130
pF1KE6 WLARR----GAPGDVWARFAVGTAGLGAEER----RALEREQARHGDLLLLPALRDAYEN
: .: :. : : . : .:::. ::: . : :. .::.: : :.. :
XP_005 WGRERQSAGGGRGAVRTLFLLGTAS-KQEERTHYQQLLAYEDRLYGDILQWGFL-DTFFN
90 100 110 120 130 140
140 150 160 170 180
pF1KE6 LTAKVLAMLAWLD---EHVAFEFVLKADDDSFARLDALLAELRAREPARRRRLYWG--FF
:: : . .: ::: :: : ..:.::: :. :: : :.: .. :. : .
XP_005 LTLKEIHFLKWLDIYCPHVPF--IFKGDDDVFVNPTNLLEFLADRQP--QENLFVGDVLQ
150 160 170 180 190
190 200 210 220 230 240
pF1KE6 SGRG-RVKPGGRWREAAWQLCDYYLPYALGGGYVLSADLVHYLRLSRDYLRAWHSEDVSL
.: : : . . .: : ::: :::......:.. :. . : :. . .:: :
XP_005 HARPIRRKDNKYYIPGALYGKASYPPYAGGGGFLMAGSLARRLHHACDTLELYPIDDVFL
200 210 220 230 240 250
250 260 270 280 290
pF1KE6 GAWLAPVDVQREHDPRFDTEYRSRGCSNQY----------LVTHKQSLEDMLEKHATLAR
: : . :: : : ::. .... ::.:: : : :..
XP_005 GMCLEVLGVQPTAHEGFKTFGISRNRNSRMNKEPCFFRAMLVVHKL-LPPELLAMWGLVH
260 270 280 290 300 310
300 310 320
pF1KE6 EGRLCKREVQLRLSYVYDWSAPPSQCCQRREGIP
. :.:..:.
XP_005 SNLTCSRKLQVL
320
>>NP_660279 (OMIM: 615313) UDP-GlcNAc:betaGal beta-1,3-N (401 aa)
initn: 261 init1: 100 opt: 274 Z-score: 296.6 bits: 63.5 E(85289): 8.8e-10
Smith-Waterman score: 276; 31.7% identity (53.4% similar) in 281 aa overlap (50-306:127-400)
20 30 40 50 60 70
pF1KE6 ALCGAALLYLARCAAEPGDPRAMSGRSPPPPAPARAAAFLAVLVASAPRAAERRSVIRST
: :. ..: :.: :. .:: .::.:
NP_660 HQPWFQVLEPQFRQFLFYRHCRYFPMLLNHPEKCRGDVYLLVVVKSVITQHDRREAIRQT
100 110 120 130 140 150
80 90 100 110 120 130
pF1KE6 WLARR----GAPGDVWARFAVGTAGLGAEER----RALEREQARHGDLLLLPALRDAYEN
: .: :. : : . : .:::. ::: . : :. .::.: : :.. :
NP_660 WGRERQSAGGGRGAVRTLFLLGTAS-KQEERTHYQQLLAYEDRLYGDILQWGFL-DTFFN
160 170 180 190 200 210
140 150 160 170 180
pF1KE6 LTAKVLAMLAWLD---EHVAFEFVLKADDDSFARLDALLAELRAREPARRRRLYWG--FF
:: : . .: ::: :: : ..:.::: :. :: : :.: .. :. : .
NP_660 LTLKEIHFLKWLDIYCPHVPF--IFKGDDDVFVNPTNLLEFLADRQP--QENLFVGDVLQ
220 230 240 250 260 270
190 200 210 220 230 240
pF1KE6 SGRG-RVKPGGRWREAAWQLCDYYLPYALGGGYVLSADLVHYLRLSRDYLRAWHSEDVSL
.: : : . . .: : ::: :::......:.. :. . : :. . .:: :
NP_660 HARPIRRKDNKYYIPGALYGKASYPPYAGGGGFLMAGSLARRLHHACDTLELYPIDDVFL
280 290 300 310 320 330
250 260 270 280 290
pF1KE6 GAWLAPVDVQREHDPRFDTEYRSRGCSNQY----------LVTHKQSLEDMLEKHATLAR
: : . :: : : ::. .... ::.:: : : :..
NP_660 GMCLEVLGVQPTAHEGFKTFGISRNRNSRMNKEPCFFRAMLVVHKL-LPPELLAMWGLVH
340 350 360 370 380
300 310 320
pF1KE6 EGRLCKREVQLRLSYVYDWSAPPSQCCQRREGIP
. :.:..:.
NP_660 SNLTCSRKLQVL
390 400
329 residues in 1 query sequences
60827320 residues in 85289 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Tue Nov 8 15:27:28 2016 done: Tue Nov 8 15:27:30 2016
Total Scan time: 7.440 Total Display time: 0.010
Function used was FASTA [36.3.4 Apr, 2011]