Result of FASTA (omim) for
pFN21AE6684
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KE6684, 340 aa
1>>>pF1KE6684 340 - 340 aa - 340 aa
Library: /omim/omim.rfq.tfa
60827320 residues in 85289 sequences
Statistics: Expectation_n fit: rho(ln(x))= 5.2250+/-0.000358; mu= 16.0566+/- 0.022
mean_var=62.8061+/-12.514, 0's: 0 Z-trim(113.5): 62 B-trim: 0 in 0/50
Lambda= 0.161835
statistics sampled from 22848 (22910) to 22848 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.652), E-opt: 0.2 (0.269), width: 16
Scan time: 7.730
The best scores are: opt bits E(85289)
XP_016862033 (OMIM: 616709) PREDICTED: alpha-1,4-N ( 340) 2358 559.2 4.4e-159
NP_057245 (OMIM: 616709) alpha-1,4-N-acetylglucosa ( 340) 2358 559.2 4.4e-159
XP_016862032 (OMIM: 616709) PREDICTED: alpha-1,4-N ( 340) 2358 559.2 4.4e-159
XP_005261701 (OMIM: 111400,607922) PREDICTED: lact ( 353) 716 175.9 1.2e-43
XP_005261704 (OMIM: 111400,607922) PREDICTED: lact ( 353) 716 175.9 1.2e-43
NP_059132 (OMIM: 111400,607922) lactosylceramide 4 ( 353) 716 175.9 1.2e-43
XP_011528535 (OMIM: 111400,607922) PREDICTED: lact ( 353) 716 175.9 1.2e-43
NP_001304967 (OMIM: 111400,607922) lactosylceramid ( 353) 716 175.9 1.2e-43
XP_005261703 (OMIM: 111400,607922) PREDICTED: lact ( 353) 716 175.9 1.2e-43
XP_005261705 (OMIM: 111400,607922) PREDICTED: lact ( 353) 716 175.9 1.2e-43
XP_006724329 (OMIM: 111400,607922) PREDICTED: lact ( 353) 716 175.9 1.2e-43
XP_006724328 (OMIM: 111400,607922) PREDICTED: lact ( 353) 716 175.9 1.2e-43
XP_016884320 (OMIM: 111400,607922) PREDICTED: lact ( 353) 716 175.9 1.2e-43
>>XP_016862033 (OMIM: 616709) PREDICTED: alpha-1,4-N-ace (340 aa)
initn: 2358 init1: 2358 opt: 2358 Z-score: 2976.9 bits: 559.2 E(85289): 4.4e-159
Smith-Waterman score: 2358; 99.7% identity (99.7% similar) in 340 aa overlap (1-340:1-340)
10 20 30 40 50 60
pF1KE6 MRKELQLSLSVTLLLVCGFLYQFTLKSSCLFCLPSFKSHQGLEALLSHRRGIVFLETSER
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 MRKELQLSLSVTLLLVCGFLYQFTLKSSCLFCLPSFKSHQGLEALLSHRRGIVFLETSER
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE6 MEPPHLVSCSVESAAKIYPEWPVVFFMKGLTDSTPMPSNSTYPAFSFLSAIDNVFLFPLD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 MEPPHLVSCSVESAAKIYPEWPVVFFMKGLTDSTPMPSNSTYPAFSFLSAIDNVFLFPLD
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE6 MKRLLEDTPLFSWYNQINASAERNWLHISSDASRLAIIWKYGGIYMDTDVISIRPIPEEN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 MKRLLEDTPLFSWYNQINASAERNWLHISSDASRLAIIWKYGGIYMDTDVISIRPIPEEN
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE6 FLAAQASRYSSNGIFGFLPHHPFLWECMENFVEHYNSDIWGNQGPELMTRMLRVWCKLED
::::::::::::::::::::::::::::::::::::: ::::::::::::::::::::::
XP_016 FLAAQASRYSSNGIFGFLPHHPFLWECMENFVEHYNSAIWGNQGPELMTRMLRVWCKLED
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE6 FQEVSDLRCLNISFLHPQRFYPISYREWRRYYEVWDTEPSFNVSYALHLWNHMNQEGRAV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 FQEVSDLRCLNISFLHPQRFYPISYREWRRYYEVWDTEPSFNVSYALHLWNHMNQEGRAV
250 260 270 280 290 300
310 320 330 340
pF1KE6 IRGSNTLVENLYRKHCPRTYRDLIKGPEGSVTGELGPGNK
::::::::::::::::::::::::::::::::::::::::
XP_016 IRGSNTLVENLYRKHCPRTYRDLIKGPEGSVTGELGPGNK
310 320 330 340
>>NP_057245 (OMIM: 616709) alpha-1,4-N-acetylglucosaminy (340 aa)
initn: 2358 init1: 2358 opt: 2358 Z-score: 2976.9 bits: 559.2 E(85289): 4.4e-159
Smith-Waterman score: 2358; 99.7% identity (99.7% similar) in 340 aa overlap (1-340:1-340)
10 20 30 40 50 60
pF1KE6 MRKELQLSLSVTLLLVCGFLYQFTLKSSCLFCLPSFKSHQGLEALLSHRRGIVFLETSER
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_057 MRKELQLSLSVTLLLVCGFLYQFTLKSSCLFCLPSFKSHQGLEALLSHRRGIVFLETSER
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE6 MEPPHLVSCSVESAAKIYPEWPVVFFMKGLTDSTPMPSNSTYPAFSFLSAIDNVFLFPLD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_057 MEPPHLVSCSVESAAKIYPEWPVVFFMKGLTDSTPMPSNSTYPAFSFLSAIDNVFLFPLD
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE6 MKRLLEDTPLFSWYNQINASAERNWLHISSDASRLAIIWKYGGIYMDTDVISIRPIPEEN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_057 MKRLLEDTPLFSWYNQINASAERNWLHISSDASRLAIIWKYGGIYMDTDVISIRPIPEEN
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE6 FLAAQASRYSSNGIFGFLPHHPFLWECMENFVEHYNSDIWGNQGPELMTRMLRVWCKLED
::::::::::::::::::::::::::::::::::::: ::::::::::::::::::::::
NP_057 FLAAQASRYSSNGIFGFLPHHPFLWECMENFVEHYNSAIWGNQGPELMTRMLRVWCKLED
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE6 FQEVSDLRCLNISFLHPQRFYPISYREWRRYYEVWDTEPSFNVSYALHLWNHMNQEGRAV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_057 FQEVSDLRCLNISFLHPQRFYPISYREWRRYYEVWDTEPSFNVSYALHLWNHMNQEGRAV
250 260 270 280 290 300
310 320 330 340
pF1KE6 IRGSNTLVENLYRKHCPRTYRDLIKGPEGSVTGELGPGNK
::::::::::::::::::::::::::::::::::::::::
NP_057 IRGSNTLVENLYRKHCPRTYRDLIKGPEGSVTGELGPGNK
310 320 330 340
>>XP_016862032 (OMIM: 616709) PREDICTED: alpha-1,4-N-ace (340 aa)
initn: 2358 init1: 2358 opt: 2358 Z-score: 2976.9 bits: 559.2 E(85289): 4.4e-159
Smith-Waterman score: 2358; 99.7% identity (99.7% similar) in 340 aa overlap (1-340:1-340)
10 20 30 40 50 60
pF1KE6 MRKELQLSLSVTLLLVCGFLYQFTLKSSCLFCLPSFKSHQGLEALLSHRRGIVFLETSER
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 MRKELQLSLSVTLLLVCGFLYQFTLKSSCLFCLPSFKSHQGLEALLSHRRGIVFLETSER
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE6 MEPPHLVSCSVESAAKIYPEWPVVFFMKGLTDSTPMPSNSTYPAFSFLSAIDNVFLFPLD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 MEPPHLVSCSVESAAKIYPEWPVVFFMKGLTDSTPMPSNSTYPAFSFLSAIDNVFLFPLD
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE6 MKRLLEDTPLFSWYNQINASAERNWLHISSDASRLAIIWKYGGIYMDTDVISIRPIPEEN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 MKRLLEDTPLFSWYNQINASAERNWLHISSDASRLAIIWKYGGIYMDTDVISIRPIPEEN
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE6 FLAAQASRYSSNGIFGFLPHHPFLWECMENFVEHYNSDIWGNQGPELMTRMLRVWCKLED
::::::::::::::::::::::::::::::::::::: ::::::::::::::::::::::
XP_016 FLAAQASRYSSNGIFGFLPHHPFLWECMENFVEHYNSAIWGNQGPELMTRMLRVWCKLED
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE6 FQEVSDLRCLNISFLHPQRFYPISYREWRRYYEVWDTEPSFNVSYALHLWNHMNQEGRAV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 FQEVSDLRCLNISFLHPQRFYPISYREWRRYYEVWDTEPSFNVSYALHLWNHMNQEGRAV
250 260 270 280 290 300
310 320 330 340
pF1KE6 IRGSNTLVENLYRKHCPRTYRDLIKGPEGSVTGELGPGNK
::::::::::::::::::::::::::::::::::::::::
XP_016 IRGSNTLVENLYRKHCPRTYRDLIKGPEGSVTGELGPGNK
310 320 330 340
>>XP_005261701 (OMIM: 111400,607922) PREDICTED: lactosyl (353 aa)
initn: 597 init1: 254 opt: 716 Z-score: 904.8 bits: 175.9 E(85289): 1.2e-43
Smith-Waterman score: 716; 38.4% identity (66.7% similar) in 315 aa overlap (18-323:50-349)
10 20 30 40
pF1KE6 MRKELQLSLSVTLLLVCGFLYQFTLKSSC-LFCLPSFKSHQGLEALL
: ::.. . : . :. :: .
XP_005 VCTLFIIGFKFTFFVSIMIYWHVVGEPKEKGQLYNLPAEIPCPTLTPPTPPSHGPTPG--
20 30 40 50 60 70
50 60 70 80 90 100
pF1KE6 SHRRGIVFLETSERMEPPHLVSCSVESAAKIYPEWPVVFFMKGLTDSTPMPSNSTYP---
.: :::::.: .: : :::::::. .:: :. .:::: . :.. :
XP_005 ----NIFFLETSDRTNPNFLFMCSVESAARTHPESHVLVLMKGLPGG-----NASLPRHL
80 90 100 110 120
110 120 130 140 150 160
pF1KE6 AFSFLSAIDNVFLFPLDMKRLLEDTPLFSWYNQINASAERNWLHISSDASRLAIIWKYGG
..:.:: . :: ..:::...:..:::: .:: ... : : . :::::.:..::.::
XP_005 GISLLSCFPNVQMLPLDLRELFRDTPLADWYAAVQGRWEPYLLPVLSDASRIALMWKFGG
130 140 150 160 170 180
170 180 190 200 210 220
pF1KE6 IYMDTDVISIRPIPE-ENFLAAQASRYSSNGIF-GFLPHHPFLWECMENFVEHYNSDIWG
::.::: : .. . . : :..: ::: :: : .: .: :. ::..::.:::. :::
XP_005 IYLDTDFIVLKNLRNLTNVLGTQ-SRYVLNGAFLAFERRHEFMALCMRDFVDHYNGWIWG
190 200 210 220 230 240
230 240 250 260 270
pF1KE6 NQGPELMTRMLRVWCKLEDFQEVSDLRCLNISFLHPQRFYPISYREWRRYYEVWDTE--P
.:::.:.::... ::..... : : ... : :. :::: ...:..:.: . : :
XP_005 HQGPQLLTRVFKKWCSIRSLAESRA--CRGVTTLPPEAFYPIPWQDWKKYFEDINPEELP
250 260 270 280 290 300
280 290 300 310 320 330
pF1KE6 SF-NVSYALHLWNHMNQEGRAVIRGSNTLVENLYRKHCPRTYRDLIKGPEGSVTGELGPG
. ...::.:.::. .: : : .:. .:. ..:: :.. .
XP_005 RLLSATYAVHVWNKKSQ-GTRFEATSRALLAQLHARYCPTTHEAMKMYL
310 320 330 340 350
340
pF1KE6 NK
>>XP_005261704 (OMIM: 111400,607922) PREDICTED: lactosyl (353 aa)
initn: 597 init1: 254 opt: 716 Z-score: 904.8 bits: 175.9 E(85289): 1.2e-43
Smith-Waterman score: 716; 38.4% identity (66.7% similar) in 315 aa overlap (18-323:50-349)
10 20 30 40
pF1KE6 MRKELQLSLSVTLLLVCGFLYQFTLKSSC-LFCLPSFKSHQGLEALL
: ::.. . : . :. :: .
XP_005 VCTLFIIGFKFTFFVSIMIYWHVVGEPKEKGQLYNLPAEIPCPTLTPPTPPSHGPTPG--
20 30 40 50 60 70
50 60 70 80 90 100
pF1KE6 SHRRGIVFLETSERMEPPHLVSCSVESAAKIYPEWPVVFFMKGLTDSTPMPSNSTYP---
.: :::::.: .: : :::::::. .:: :. .:::: . :.. :
XP_005 ----NIFFLETSDRTNPNFLFMCSVESAARTHPESHVLVLMKGLPGG-----NASLPRHL
80 90 100 110 120
110 120 130 140 150 160
pF1KE6 AFSFLSAIDNVFLFPLDMKRLLEDTPLFSWYNQINASAERNWLHISSDASRLAIIWKYGG
..:.:: . :: ..:::...:..:::: .:: ... : : . :::::.:..::.::
XP_005 GISLLSCFPNVQMLPLDLRELFRDTPLADWYAAVQGRWEPYLLPVLSDASRIALMWKFGG
130 140 150 160 170 180
170 180 190 200 210 220
pF1KE6 IYMDTDVISIRPIPE-ENFLAAQASRYSSNGIF-GFLPHHPFLWECMENFVEHYNSDIWG
::.::: : .. . . : :..: ::: :: : .: .: :. ::..::.:::. :::
XP_005 IYLDTDFIVLKNLRNLTNVLGTQ-SRYVLNGAFLAFERRHEFMALCMRDFVDHYNGWIWG
190 200 210 220 230 240
230 240 250 260 270
pF1KE6 NQGPELMTRMLRVWCKLEDFQEVSDLRCLNISFLHPQRFYPISYREWRRYYEVWDTE--P
.:::.:.::... ::..... : : ... : :. :::: ...:..:.: . : :
XP_005 HQGPQLLTRVFKKWCSIRSLAESRA--CRGVTTLPPEAFYPIPWQDWKKYFEDINPEELP
250 260 270 280 290 300
280 290 300 310 320 330
pF1KE6 SF-NVSYALHLWNHMNQEGRAVIRGSNTLVENLYRKHCPRTYRDLIKGPEGSVTGELGPG
. ...::.:.::. .: : : .:. .:. ..:: :.. .
XP_005 RLLSATYAVHVWNKKSQ-GTRFEATSRALLAQLHARYCPTTHEAMKMYL
310 320 330 340 350
340
pF1KE6 NK
>>NP_059132 (OMIM: 111400,607922) lactosylceramide 4-alp (353 aa)
initn: 597 init1: 254 opt: 716 Z-score: 904.8 bits: 175.9 E(85289): 1.2e-43
Smith-Waterman score: 716; 38.4% identity (66.7% similar) in 315 aa overlap (18-323:50-349)
10 20 30 40
pF1KE6 MRKELQLSLSVTLLLVCGFLYQFTLKSSC-LFCLPSFKSHQGLEALL
: ::.. . : . :. :: .
NP_059 VCTLFIIGFKFTFFVSIMIYWHVVGEPKEKGQLYNLPAEIPCPTLTPPTPPSHGPTPG--
20 30 40 50 60 70
50 60 70 80 90 100
pF1KE6 SHRRGIVFLETSERMEPPHLVSCSVESAAKIYPEWPVVFFMKGLTDSTPMPSNSTYP---
.: :::::.: .: : :::::::. .:: :. .:::: . :.. :
NP_059 ----NIFFLETSDRTNPNFLFMCSVESAARTHPESHVLVLMKGLPGG-----NASLPRHL
80 90 100 110 120
110 120 130 140 150 160
pF1KE6 AFSFLSAIDNVFLFPLDMKRLLEDTPLFSWYNQINASAERNWLHISSDASRLAIIWKYGG
..:.:: . :: ..:::...:..:::: .:: ... : : . :::::.:..::.::
NP_059 GISLLSCFPNVQMLPLDLRELFRDTPLADWYAAVQGRWEPYLLPVLSDASRIALMWKFGG
130 140 150 160 170 180
170 180 190 200 210 220
pF1KE6 IYMDTDVISIRPIPE-ENFLAAQASRYSSNGIF-GFLPHHPFLWECMENFVEHYNSDIWG
::.::: : .. . . : :..: ::: :: : .: .: :. ::..::.:::. :::
NP_059 IYLDTDFIVLKNLRNLTNVLGTQ-SRYVLNGAFLAFERRHEFMALCMRDFVDHYNGWIWG
190 200 210 220 230 240
230 240 250 260 270
pF1KE6 NQGPELMTRMLRVWCKLEDFQEVSDLRCLNISFLHPQRFYPISYREWRRYYEVWDTE--P
.:::.:.::... ::..... : : ... : :. :::: ...:..:.: . : :
NP_059 HQGPQLLTRVFKKWCSIRSLAESRA--CRGVTTLPPEAFYPIPWQDWKKYFEDINPEELP
250 260 270 280 290 300
280 290 300 310 320 330
pF1KE6 SF-NVSYALHLWNHMNQEGRAVIRGSNTLVENLYRKHCPRTYRDLIKGPEGSVTGELGPG
. ...::.:.::. .: : : .:. .:. ..:: :.. .
NP_059 RLLSATYAVHVWNKKSQ-GTRFEATSRALLAQLHARYCPTTHEAMKMYL
310 320 330 340 350
340
pF1KE6 NK
>>XP_011528535 (OMIM: 111400,607922) PREDICTED: lactosyl (353 aa)
initn: 597 init1: 254 opt: 716 Z-score: 904.8 bits: 175.9 E(85289): 1.2e-43
Smith-Waterman score: 716; 38.4% identity (66.7% similar) in 315 aa overlap (18-323:50-349)
10 20 30 40
pF1KE6 MRKELQLSLSVTLLLVCGFLYQFTLKSSC-LFCLPSFKSHQGLEALL
: ::.. . : . :. :: .
XP_011 VCTLFIIGFKFTFFVSIMIYWHVVGEPKEKGQLYNLPAEIPCPTLTPPTPPSHGPTPG--
20 30 40 50 60 70
50 60 70 80 90 100
pF1KE6 SHRRGIVFLETSERMEPPHLVSCSVESAAKIYPEWPVVFFMKGLTDSTPMPSNSTYP---
.: :::::.: .: : :::::::. .:: :. .:::: . :.. :
XP_011 ----NIFFLETSDRTNPNFLFMCSVESAARTHPESHVLVLMKGLPGG-----NASLPRHL
80 90 100 110 120
110 120 130 140 150 160
pF1KE6 AFSFLSAIDNVFLFPLDMKRLLEDTPLFSWYNQINASAERNWLHISSDASRLAIIWKYGG
..:.:: . :: ..:::...:..:::: .:: ... : : . :::::.:..::.::
XP_011 GISLLSCFPNVQMLPLDLRELFRDTPLADWYAAVQGRWEPYLLPVLSDASRIALMWKFGG
130 140 150 160 170 180
170 180 190 200 210 220
pF1KE6 IYMDTDVISIRPIPE-ENFLAAQASRYSSNGIF-GFLPHHPFLWECMENFVEHYNSDIWG
::.::: : .. . . : :..: ::: :: : .: .: :. ::..::.:::. :::
XP_011 IYLDTDFIVLKNLRNLTNVLGTQ-SRYVLNGAFLAFERRHEFMALCMRDFVDHYNGWIWG
190 200 210 220 230 240
230 240 250 260 270
pF1KE6 NQGPELMTRMLRVWCKLEDFQEVSDLRCLNISFLHPQRFYPISYREWRRYYEVWDTE--P
.:::.:.::... ::..... : : ... : :. :::: ...:..:.: . : :
XP_011 HQGPQLLTRVFKKWCSIRSLAESRA--CRGVTTLPPEAFYPIPWQDWKKYFEDINPEELP
250 260 270 280 290 300
280 290 300 310 320 330
pF1KE6 SF-NVSYALHLWNHMNQEGRAVIRGSNTLVENLYRKHCPRTYRDLIKGPEGSVTGELGPG
. ...::.:.::. .: : : .:. .:. ..:: :.. .
XP_011 RLLSATYAVHVWNKKSQ-GTRFEATSRALLAQLHARYCPTTHEAMKMYL
310 320 330 340 350
340
pF1KE6 NK
>>NP_001304967 (OMIM: 111400,607922) lactosylceramide 4- (353 aa)
initn: 597 init1: 254 opt: 716 Z-score: 904.8 bits: 175.9 E(85289): 1.2e-43
Smith-Waterman score: 716; 38.4% identity (66.7% similar) in 315 aa overlap (18-323:50-349)
10 20 30 40
pF1KE6 MRKELQLSLSVTLLLVCGFLYQFTLKSSC-LFCLPSFKSHQGLEALL
: ::.. . : . :. :: .
NP_001 VCTLFIIGFKFTFFVSIMIYWHVVGEPKEKGQLYNLPAEIPCPTLTPPTPPSHGPTPG--
20 30 40 50 60 70
50 60 70 80 90 100
pF1KE6 SHRRGIVFLETSERMEPPHLVSCSVESAAKIYPEWPVVFFMKGLTDSTPMPSNSTYP---
.: :::::.: .: : :::::::. .:: :. .:::: . :.. :
NP_001 ----NIFFLETSDRTNPNFLFMCSVESAARTHPESHVLVLMKGLPGG-----NASLPRHL
80 90 100 110 120
110 120 130 140 150 160
pF1KE6 AFSFLSAIDNVFLFPLDMKRLLEDTPLFSWYNQINASAERNWLHISSDASRLAIIWKYGG
..:.:: . :: ..:::...:..:::: .:: ... : : . :::::.:..::.::
NP_001 GISLLSCFPNVQMLPLDLRELFRDTPLADWYAAVQGRWEPYLLPVLSDASRIALMWKFGG
130 140 150 160 170 180
170 180 190 200 210 220
pF1KE6 IYMDTDVISIRPIPE-ENFLAAQASRYSSNGIF-GFLPHHPFLWECMENFVEHYNSDIWG
::.::: : .. . . : :..: ::: :: : .: .: :. ::..::.:::. :::
NP_001 IYLDTDFIVLKNLRNLTNVLGTQ-SRYVLNGAFLAFERRHEFMALCMRDFVDHYNGWIWG
190 200 210 220 230 240
230 240 250 260 270
pF1KE6 NQGPELMTRMLRVWCKLEDFQEVSDLRCLNISFLHPQRFYPISYREWRRYYEVWDTE--P
.:::.:.::... ::..... : : ... : :. :::: ...:..:.: . : :
NP_001 HQGPQLLTRVFKKWCSIRSLAESRA--CRGVTTLPPEAFYPIPWQDWKKYFEDINPEELP
250 260 270 280 290 300
280 290 300 310 320 330
pF1KE6 SF-NVSYALHLWNHMNQEGRAVIRGSNTLVENLYRKHCPRTYRDLIKGPEGSVTGELGPG
. ...::.:.::. .: : : .:. .:. ..:: :.. .
NP_001 RLLSATYAVHVWNKKSQ-GTRFEATSRALLAQLHARYCPTTHEAMKMYL
310 320 330 340 350
340
pF1KE6 NK
>>XP_005261703 (OMIM: 111400,607922) PREDICTED: lactosyl (353 aa)
initn: 597 init1: 254 opt: 716 Z-score: 904.8 bits: 175.9 E(85289): 1.2e-43
Smith-Waterman score: 716; 38.4% identity (66.7% similar) in 315 aa overlap (18-323:50-349)
10 20 30 40
pF1KE6 MRKELQLSLSVTLLLVCGFLYQFTLKSSC-LFCLPSFKSHQGLEALL
: ::.. . : . :. :: .
XP_005 VCTLFIIGFKFTFFVSIMIYWHVVGEPKEKGQLYNLPAEIPCPTLTPPTPPSHGPTPG--
20 30 40 50 60 70
50 60 70 80 90 100
pF1KE6 SHRRGIVFLETSERMEPPHLVSCSVESAAKIYPEWPVVFFMKGLTDSTPMPSNSTYP---
.: :::::.: .: : :::::::. .:: :. .:::: . :.. :
XP_005 ----NIFFLETSDRTNPNFLFMCSVESAARTHPESHVLVLMKGLPGG-----NASLPRHL
80 90 100 110 120
110 120 130 140 150 160
pF1KE6 AFSFLSAIDNVFLFPLDMKRLLEDTPLFSWYNQINASAERNWLHISSDASRLAIIWKYGG
..:.:: . :: ..:::...:..:::: .:: ... : : . :::::.:..::.::
XP_005 GISLLSCFPNVQMLPLDLRELFRDTPLADWYAAVQGRWEPYLLPVLSDASRIALMWKFGG
130 140 150 160 170 180
170 180 190 200 210 220
pF1KE6 IYMDTDVISIRPIPE-ENFLAAQASRYSSNGIF-GFLPHHPFLWECMENFVEHYNSDIWG
::.::: : .. . . : :..: ::: :: : .: .: :. ::..::.:::. :::
XP_005 IYLDTDFIVLKNLRNLTNVLGTQ-SRYVLNGAFLAFERRHEFMALCMRDFVDHYNGWIWG
190 200 210 220 230 240
230 240 250 260 270
pF1KE6 NQGPELMTRMLRVWCKLEDFQEVSDLRCLNISFLHPQRFYPISYREWRRYYEVWDTE--P
.:::.:.::... ::..... : : ... : :. :::: ...:..:.: . : :
XP_005 HQGPQLLTRVFKKWCSIRSLAESRA--CRGVTTLPPEAFYPIPWQDWKKYFEDINPEELP
250 260 270 280 290 300
280 290 300 310 320 330
pF1KE6 SF-NVSYALHLWNHMNQEGRAVIRGSNTLVENLYRKHCPRTYRDLIKGPEGSVTGELGPG
. ...::.:.::. .: : : .:. .:. ..:: :.. .
XP_005 RLLSATYAVHVWNKKSQ-GTRFEATSRALLAQLHARYCPTTHEAMKMYL
310 320 330 340 350
340
pF1KE6 NK
>>XP_005261705 (OMIM: 111400,607922) PREDICTED: lactosyl (353 aa)
initn: 597 init1: 254 opt: 716 Z-score: 904.8 bits: 175.9 E(85289): 1.2e-43
Smith-Waterman score: 716; 38.4% identity (66.7% similar) in 315 aa overlap (18-323:50-349)
10 20 30 40
pF1KE6 MRKELQLSLSVTLLLVCGFLYQFTLKSSC-LFCLPSFKSHQGLEALL
: ::.. . : . :. :: .
XP_005 VCTLFIIGFKFTFFVSIMIYWHVVGEPKEKGQLYNLPAEIPCPTLTPPTPPSHGPTPG--
20 30 40 50 60 70
50 60 70 80 90 100
pF1KE6 SHRRGIVFLETSERMEPPHLVSCSVESAAKIYPEWPVVFFMKGLTDSTPMPSNSTYP---
.: :::::.: .: : :::::::. .:: :. .:::: . :.. :
XP_005 ----NIFFLETSDRTNPNFLFMCSVESAARTHPESHVLVLMKGLPGG-----NASLPRHL
80 90 100 110 120
110 120 130 140 150 160
pF1KE6 AFSFLSAIDNVFLFPLDMKRLLEDTPLFSWYNQINASAERNWLHISSDASRLAIIWKYGG
..:.:: . :: ..:::...:..:::: .:: ... : : . :::::.:..::.::
XP_005 GISLLSCFPNVQMLPLDLRELFRDTPLADWYAAVQGRWEPYLLPVLSDASRIALMWKFGG
130 140 150 160 170 180
170 180 190 200 210 220
pF1KE6 IYMDTDVISIRPIPE-ENFLAAQASRYSSNGIF-GFLPHHPFLWECMENFVEHYNSDIWG
::.::: : .. . . : :..: ::: :: : .: .: :. ::..::.:::. :::
XP_005 IYLDTDFIVLKNLRNLTNVLGTQ-SRYVLNGAFLAFERRHEFMALCMRDFVDHYNGWIWG
190 200 210 220 230 240
230 240 250 260 270
pF1KE6 NQGPELMTRMLRVWCKLEDFQEVSDLRCLNISFLHPQRFYPISYREWRRYYEVWDTE--P
.:::.:.::... ::..... : : ... : :. :::: ...:..:.: . : :
XP_005 HQGPQLLTRVFKKWCSIRSLAESRA--CRGVTTLPPEAFYPIPWQDWKKYFEDINPEELP
250 260 270 280 290 300
280 290 300 310 320 330
pF1KE6 SF-NVSYALHLWNHMNQEGRAVIRGSNTLVENLYRKHCPRTYRDLIKGPEGSVTGELGPG
. ...::.:.::. .: : : .:. .:. ..:: :.. .
XP_005 RLLSATYAVHVWNKKSQ-GTRFEATSRALLAQLHARYCPTTHEAMKMYL
310 320 330 340 350
340
pF1KE6 NK
340 residues in 1 query sequences
60827320 residues in 85289 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Tue Nov 8 15:23:43 2016 done: Tue Nov 8 15:23:44 2016
Total Scan time: 7.730 Total Display time: 0.030
Function used was FASTA [36.3.4 Apr, 2011]