Result of FASTA (omim) for
pFN21AE6642
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KE6642, 282 aa
1>>>pF1KE6642 282 - 282 aa - 282 aa
Library: /omim/omim.rfq.tfa
60827320 residues in 85289 sequences
Statistics: Expectation_n fit: rho(ln(x))= 5.7605+/-0.000442; mu= 13.4346+/- 0.027
mean_var=152.3333+/-31.131, 0's: 0 Z-trim(115.3): 150 B-trim: 688 in 2/55
Lambda= 0.103915
statistics sampled from 25333 (25606) to 25333 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.666), E-opt: 0.2 (0.3), width: 16
Scan time: 6.130
The best scores are: opt bits E(85289)
NP_059429 (OMIM: 612820) neuroplastin isoform a pr ( 282) 1867 291.9 9.4e-79
NP_001154836 (OMIM: 612820) neuroplastin isoform d ( 278) 1817 284.4 1.7e-76
NP_036560 (OMIM: 612820) neuroplastin isoform b pr ( 398) 1679 263.9 3.5e-70
NP_001154835 (OMIM: 612820) neuroplastin isoform c ( 394) 1629 256.4 6.3e-68
XP_011519754 (OMIM: 612820) PREDICTED: neuroplasti ( 372) 1501 237.1 3.7e-62
NP_001309172 (OMIM: 109480,111380) basigin isoform ( 269) 622 105.2 1.4e-22
NP_940991 (OMIM: 109480,111380) basigin isoform 2 ( 269) 622 105.2 1.4e-22
XP_016882662 (OMIM: 109480,111380) PREDICTED: basi ( 385) 612 103.9 4.9e-22
NP_001719 (OMIM: 109480,111380) basigin isoform 1 ( 385) 612 103.9 4.9e-22
NP_940993 (OMIM: 109480,111380) basigin isoform 4 ( 205) 556 95.1 1.1e-19
NP_940992 (OMIM: 109480,111380) basigin isoform 3 ( 176) 515 88.9 7.4e-18
XP_011541448 (OMIM: 615669) PREDICTED: embigin iso ( 277) 242 48.2 2e-05
NP_940851 (OMIM: 615669) embigin precursor [Homo s ( 327) 242 48.3 2.2e-05
XP_016861625 (OMIM: 608868) PREDICTED: leucine-ric ( 833) 211 44.2 0.00098
XP_011531881 (OMIM: 608868) PREDICTED: leucine-ric ( 833) 211 44.2 0.00098
XP_016861624 (OMIM: 608868) PREDICTED: leucine-ric ( 867) 211 44.2 0.001
XP_011531880 (OMIM: 608868) PREDICTED: leucine-ric (1045) 211 44.4 0.0011
XP_016861623 (OMIM: 608868) PREDICTED: leucine-ric (1068) 211 44.4 0.0011
NP_056356 (OMIM: 608868) leucine-rich repeats and (1093) 211 44.4 0.0011
XP_016873611 (OMIM: 607313,608630) PREDICTED: roun (1364) 209 44.2 0.0016
NP_071765 (OMIM: 607313,608630) roundabout homolog (1386) 209 44.2 0.0016
>>NP_059429 (OMIM: 612820) neuroplastin isoform a precur (282 aa)
initn: 1867 init1: 1867 opt: 1867 Z-score: 1534.8 bits: 291.9 E(85289): 9.4e-79
Smith-Waterman score: 1867; 100.0% identity (100.0% similar) in 282 aa overlap (1-282:1-282)
10 20 30 40 50 60
pF1KE6 MSGSSLPSALALSLLLVSGSLLPGPGAAQNEPRIVTSEEVIIRDSPVLPVTLQCNLTSSS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_059 MSGSSLPSALALSLLLVSGSLLPGPGAAQNEPRIVTSEEVIIRDSPVLPVTLQCNLTSSS
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE6 HTLTYSYWTKNGVELSATRKNASNMEYRINKPRAEDSGEYHCVYHFVSAPKANATIEVKA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_059 HTLTYSYWTKNGVELSATRKNASNMEYRINKPRAEDSGEYHCVYHFVSAPKANATIEVKA
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE6 APDITGHKRSENKNEGQDATMYCKSVGYPHPDWIWRKKENGMPMDIVNTSGRFFIINKEN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_059 APDITGHKRSENKNEGQDATMYCKSVGYPHPDWIWRKKENGMPMDIVNTSGRFFIINKEN
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE6 YTELNIVNLQITEDPGEYECNATNAIGSASVVTVLRVRSHLAPLWPFLGILAEIIILVVI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_059 YTELNIVNLQITEDPGEYECNATNAIGSASVVTVLRVRSHLAPLWPFLGILAEIIILVVI
190 200 210 220 230 240
250 260 270 280
pF1KE6 IVVYEKRKRPDEVPDDDEPAGPMKTNSTNNHKDKNLRQRNTN
::::::::::::::::::::::::::::::::::::::::::
NP_059 IVVYEKRKRPDEVPDDDEPAGPMKTNSTNNHKDKNLRQRNTN
250 260 270 280
>>NP_001154836 (OMIM: 612820) neuroplastin isoform d pre (278 aa)
initn: 1681 init1: 1681 opt: 1817 Z-score: 1494.4 bits: 284.4 E(85289): 1.7e-76
Smith-Waterman score: 1817; 98.6% identity (98.6% similar) in 282 aa overlap (1-282:1-278)
10 20 30 40 50 60
pF1KE6 MSGSSLPSALALSLLLVSGSLLPGPGAAQNEPRIVTSEEVIIRDSPVLPVTLQCNLTSSS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MSGSSLPSALALSLLLVSGSLLPGPGAAQNEPRIVTSEEVIIRDSPVLPVTLQCNLTSSS
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE6 HTLTYSYWTKNGVELSATRKNASNMEYRINKPRAEDSGEYHCVYHFVSAPKANATIEVKA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 HTLTYSYWTKNGVELSATRKNASNMEYRINKPRAEDSGEYHCVYHFVSAPKANATIEVKA
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE6 APDITGHKRSENKNEGQDATMYCKSVGYPHPDWIWRKKENGMPMDIVNTSGRFFIINKEN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 APDITGHKRSENKNEGQDATMYCKSVGYPHPDWIWRKKENGMPMDIVNTSGRFFIINKEN
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE6 YTELNIVNLQITEDPGEYECNATNAIGSASVVTVLRVRSHLAPLWPFLGILAEIIILVVI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 YTELNIVNLQITEDPGEYECNATNAIGSASVVTVLRVRSHLAPLWPFLGILAEIIILVVI
190 200 210 220 230 240
250 260 270 280
pF1KE6 IVVYEKRKRPDEVPDDDEPAGPMKTNSTNNHKDKNLRQRNTN
::::::::::::::: :::::::::::::::::::::::
NP_001 IVVYEKRKRPDEVPD----AGPMKTNSTNNHKDKNLRQRNTN
250 260 270
>>NP_036560 (OMIM: 612820) neuroplastin isoform b precur (398 aa)
initn: 1848 init1: 1679 opt: 1679 Z-score: 1380.9 bits: 263.9 E(85289): 3.5e-70
Smith-Waterman score: 1679; 99.6% identity (100.0% similar) in 252 aa overlap (31-282:147-398)
10 20 30 40 50 60
pF1KE6 MSGSSLPSALALSLLLVSGSLLPGPGAAQNEPRIVTSEEVIIRDSPVLPVTLQCNLTSSS
.:::::::::::::::::::::::::::::
NP_036 RASNDPKRNDLRQNPSITWIRAQATISVLQKPRIVTSEEVIIRDSPVLPVTLQCNLTSSS
120 130 140 150 160 170
70 80 90 100 110 120
pF1KE6 HTLTYSYWTKNGVELSATRKNASNMEYRINKPRAEDSGEYHCVYHFVSAPKANATIEVKA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_036 HTLTYSYWTKNGVELSATRKNASNMEYRINKPRAEDSGEYHCVYHFVSAPKANATIEVKA
180 190 200 210 220 230
130 140 150 160 170 180
pF1KE6 APDITGHKRSENKNEGQDATMYCKSVGYPHPDWIWRKKENGMPMDIVNTSGRFFIINKEN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_036 APDITGHKRSENKNEGQDATMYCKSVGYPHPDWIWRKKENGMPMDIVNTSGRFFIINKEN
240 250 260 270 280 290
190 200 210 220 230 240
pF1KE6 YTELNIVNLQITEDPGEYECNATNAIGSASVVTVLRVRSHLAPLWPFLGILAEIIILVVI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_036 YTELNIVNLQITEDPGEYECNATNAIGSASVVTVLRVRSHLAPLWPFLGILAEIIILVVI
300 310 320 330 340 350
250 260 270 280
pF1KE6 IVVYEKRKRPDEVPDDDEPAGPMKTNSTNNHKDKNLRQRNTN
::::::::::::::::::::::::::::::::::::::::::
NP_036 IVVYEKRKRPDEVPDDDEPAGPMKTNSTNNHKDKNLRQRNTN
360 370 380 390
>>NP_001154835 (OMIM: 612820) neuroplastin isoform c pre (394 aa)
initn: 1662 init1: 1493 opt: 1629 Z-score: 1340.5 bits: 256.4 E(85289): 6.3e-68
Smith-Waterman score: 1629; 98.0% identity (98.4% similar) in 252 aa overlap (31-282:147-394)
10 20 30 40 50 60
pF1KE6 MSGSSLPSALALSLLLVSGSLLPGPGAAQNEPRIVTSEEVIIRDSPVLPVTLQCNLTSSS
.:::::::::::::::::::::::::::::
NP_001 RASNDPKRNDLRQNPSITWIRAQATISVLQKPRIVTSEEVIIRDSPVLPVTLQCNLTSSS
120 130 140 150 160 170
70 80 90 100 110 120
pF1KE6 HTLTYSYWTKNGVELSATRKNASNMEYRINKPRAEDSGEYHCVYHFVSAPKANATIEVKA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 HTLTYSYWTKNGVELSATRKNASNMEYRINKPRAEDSGEYHCVYHFVSAPKANATIEVKA
180 190 200 210 220 230
130 140 150 160 170 180
pF1KE6 APDITGHKRSENKNEGQDATMYCKSVGYPHPDWIWRKKENGMPMDIVNTSGRFFIINKEN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 APDITGHKRSENKNEGQDATMYCKSVGYPHPDWIWRKKENGMPMDIVNTSGRFFIINKEN
240 250 260 270 280 290
190 200 210 220 230 240
pF1KE6 YTELNIVNLQITEDPGEYECNATNAIGSASVVTVLRVRSHLAPLWPFLGILAEIIILVVI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 YTELNIVNLQITEDPGEYECNATNAIGSASVVTVLRVRSHLAPLWPFLGILAEIIILVVI
300 310 320 330 340 350
250 260 270 280
pF1KE6 IVVYEKRKRPDEVPDDDEPAGPMKTNSTNNHKDKNLRQRNTN
::::::::::::::: :::::::::::::::::::::::
NP_001 IVVYEKRKRPDEVPD----AGPMKTNSTNNHKDKNLRQRNTN
360 370 380 390
>>XP_011519754 (OMIM: 612820) PREDICTED: neuroplastin is (372 aa)
initn: 1670 init1: 1501 opt: 1501 Z-score: 1237.0 bits: 237.1 E(85289): 3.7e-62
Smith-Waterman score: 1501; 99.6% identity (100.0% similar) in 226 aa overlap (31-256:147-372)
10 20 30 40 50 60
pF1KE6 MSGSSLPSALALSLLLVSGSLLPGPGAAQNEPRIVTSEEVIIRDSPVLPVTLQCNLTSSS
.:::::::::::::::::::::::::::::
XP_011 RASNDPKRNDLRQNPSITWIRAQATISVLQKPRIVTSEEVIIRDSPVLPVTLQCNLTSSS
120 130 140 150 160 170
70 80 90 100 110 120
pF1KE6 HTLTYSYWTKNGVELSATRKNASNMEYRINKPRAEDSGEYHCVYHFVSAPKANATIEVKA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 HTLTYSYWTKNGVELSATRKNASNMEYRINKPRAEDSGEYHCVYHFVSAPKANATIEVKA
180 190 200 210 220 230
130 140 150 160 170 180
pF1KE6 APDITGHKRSENKNEGQDATMYCKSVGYPHPDWIWRKKENGMPMDIVNTSGRFFIINKEN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 APDITGHKRSENKNEGQDATMYCKSVGYPHPDWIWRKKENGMPMDIVNTSGRFFIINKEN
240 250 260 270 280 290
190 200 210 220 230 240
pF1KE6 YTELNIVNLQITEDPGEYECNATNAIGSASVVTVLRVRSHLAPLWPFLGILAEIIILVVI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 YTELNIVNLQITEDPGEYECNATNAIGSASVVTVLRVRSHLAPLWPFLGILAEIIILVVI
300 310 320 330 340 350
250 260 270 280
pF1KE6 IVVYEKRKRPDEVPDDDEPAGPMKTNSTNNHKDKNLRQRNTN
::::::::::::::::
XP_011 IVVYEKRKRPDEVPDD
360 370
>>NP_001309172 (OMIM: 109480,111380) basigin isoform 2 p (269 aa)
initn: 498 init1: 363 opt: 622 Z-score: 526.3 bits: 105.2 E(85289): 1.4e-22
Smith-Waterman score: 622; 38.4% identity (69.2% similar) in 279 aa overlap (10-282:1-269)
10 20 30 40 50
pF1KE6 MSGSSLPSALALSLLLVSG-SLLPGPGAAQNEPRIVTSEEVIIRDSPVLPVTLQCNLTSS
.: .:... : .:: ::. . :. : . : .: : :.:..:
NP_001 MAAALFVLLGFALLGTHGASGAAGTVFTTVEDL--GSKIL---LTCSLNDS
10 20 30 40
60 70 80 90 100 110
pF1KE6 SHTLTYSYWTKNGVELSATRKNASNMEYRINKPRAEDS-GEYHCVYHFVSAPKANATIEV
. .: : :.:: :. ... :.... ..:. ::: :: :. : ..:.:..
NP_001 ATEVTGHRWLKGGVVLKEDALPGQKTEFKVD---SDDQWGEYSCV--FLPEPMGTANIQL
50 60 70 80 90 100
120 130 140 150 160 170
pF1KE6 KAAPDITGHKRSENKNEGQDATMYCKSVGYPH-PDWIWRKKENGMPMDIVNTS-GRFFII
.. : . . : ::. :::. : . ::: . : :: : : .. ..: : .:::.
NP_001 HGPPRVKAVKSSEHINEGETAMLVCKSESVPPVTDWAWYKITDSEDKALMNGSESRFFVS
110 120 130 140 150 160
180 190 200 210 220 230
pF1KE6 NKENYTELNIVNLQITEDPGEYECNATNAIGSASVVTVLRVRSHLAPLWPFLGILAEIII
.... .::.: ::.. :::.:.::.:.. :: ... .:::::::: :::::::.::...
NP_001 SSQGRSELHIENLNMEADPGQYRCNGTSSKGSDQAIITLRVRSHLAALWPFLGIVAEVLV
170 180 190 200 210 220
240 250 260 270 280
pF1KE6 LVVIIVVYEKRKRPDEVPDDDEP-AGPMKTNSTN-NHKDKNLRQRNTN
::.:: .::::..:..: :::. ..:.:... . : : ::.::::..
NP_001 LVTIIFIYEKRRKPEDVLDDDDAGSAPLKSSGQHQNDKGKNVRQRNSS
230 240 250 260
>>NP_940991 (OMIM: 109480,111380) basigin isoform 2 [Hom (269 aa)
initn: 498 init1: 363 opt: 622 Z-score: 526.3 bits: 105.2 E(85289): 1.4e-22
Smith-Waterman score: 622; 38.4% identity (69.2% similar) in 279 aa overlap (10-282:1-269)
10 20 30 40 50
pF1KE6 MSGSSLPSALALSLLLVSG-SLLPGPGAAQNEPRIVTSEEVIIRDSPVLPVTLQCNLTSS
.: .:... : .:: ::. . :. : . : .: : :.:..:
NP_940 MAAALFVLLGFALLGTHGASGAAGTVFTTVEDL--GSKIL---LTCSLNDS
10 20 30 40
60 70 80 90 100 110
pF1KE6 SHTLTYSYWTKNGVELSATRKNASNMEYRINKPRAEDS-GEYHCVYHFVSAPKANATIEV
. .: : :.:: :. ... :.... ..:. ::: :: :. : ..:.:..
NP_940 ATEVTGHRWLKGGVVLKEDALPGQKTEFKVD---SDDQWGEYSCV--FLPEPMGTANIQL
50 60 70 80 90 100
120 130 140 150 160 170
pF1KE6 KAAPDITGHKRSENKNEGQDATMYCKSVGYPH-PDWIWRKKENGMPMDIVNTS-GRFFII
.. : . . : ::. :::. : . ::: . : :: : : .. ..: : .:::.
NP_940 HGPPRVKAVKSSEHINEGETAMLVCKSESVPPVTDWAWYKITDSEDKALMNGSESRFFVS
110 120 130 140 150 160
180 190 200 210 220 230
pF1KE6 NKENYTELNIVNLQITEDPGEYECNATNAIGSASVVTVLRVRSHLAPLWPFLGILAEIII
.... .::.: ::.. :::.:.::.:.. :: ... .:::::::: :::::::.::...
NP_940 SSQGRSELHIENLNMEADPGQYRCNGTSSKGSDQAIITLRVRSHLAALWPFLGIVAEVLV
170 180 190 200 210 220
240 250 260 270 280
pF1KE6 LVVIIVVYEKRKRPDEVPDDDEP-AGPMKTNSTN-NHKDKNLRQRNTN
::.:: .::::..:..: :::. ..:.:... . : : ::.::::..
NP_940 LVTIIFIYEKRRKPEDVLDDDDAGSAPLKSSGQHQNDKGKNVRQRNSS
230 240 250 260
>>XP_016882662 (OMIM: 109480,111380) PREDICTED: basigin (385 aa)
initn: 470 init1: 363 opt: 612 Z-score: 516.6 bits: 103.9 E(85289): 4.9e-22
Smith-Waterman score: 612; 40.1% identity (72.2% similar) in 237 aa overlap (50-282:153-385)
20 30 40 50 60 70
pF1KE6 SLLPGPGAAQNEPRIVTSEEVIIRDSPVLPVTLQCNLTSSSHTLTYSYWTKNGVELSATR
. : :.:..:. .: : :.:: :.
XP_016 PRVKWVRAQAVVLVLEPGTVFTTVEDLGSKILLTCSLNDSATEVTGHRWLKGGVVLKEDA
130 140 150 160 170 180
80 90 100 110 120 130
pF1KE6 KNASNMEYRINKPRAEDSGEYHCVYHFVSAPKANATIEVKAAPDITGHKRSENKNEGQDA
... :..... .. ::: :: :. : ..:.:.... : . . : ::. :::. :
XP_016 LPGQKTEFKVDSD--DQWGEYSCV--FLPEPMGTANIQLHGPPRVKAVKSSEHINEGETA
190 200 210 220 230
140 150 160 170 180 190
pF1KE6 TMYCKSVGYPH-PDWIWRKKENGMPMDIVNTS-GRFFIINKENYTELNIVNLQITEDPGE
. ::: . : :: : : .. ..: : .:::. .... .::.: ::.. :::.
XP_016 MLVCKSESVPPVTDWAWYKITDSEDKALMNGSESRFFVSSSQGRSELHIENLNMEADPGQ
240 250 260 270 280 290
200 210 220 230 240 250
pF1KE6 YECNATNAIGSASVVTVLRVRSHLAPLWPFLGILAEIIILVVIIVVYEKRKRPDEVPDDD
:.::.:.. :: ... .:::::::: :::::::.::...::.:: .::::..:..: :::
XP_016 YRCNGTSSKGSDQAIITLRVRSHLAALWPFLGIVAEVLVLVTIIFIYEKRRKPEDVLDDD
300 310 320 330 340 350
260 270 280
pF1KE6 EP-AGPMKTNSTN-NHKDKNLRQRNTN
. ..:.:... . : : ::.::::..
XP_016 DAGSAPLKSSGQHQNDKGKNVRQRNSS
360 370 380
>>NP_001719 (OMIM: 109480,111380) basigin isoform 1 prec (385 aa)
initn: 470 init1: 363 opt: 612 Z-score: 516.6 bits: 103.9 E(85289): 4.9e-22
Smith-Waterman score: 612; 40.1% identity (72.2% similar) in 237 aa overlap (50-282:153-385)
20 30 40 50 60 70
pF1KE6 SLLPGPGAAQNEPRIVTSEEVIIRDSPVLPVTLQCNLTSSSHTLTYSYWTKNGVELSATR
. : :.:..:. .: : :.:: :.
NP_001 PRVKWVRAQAVVLVLEPGTVFTTVEDLGSKILLTCSLNDSATEVTGHRWLKGGVVLKEDA
130 140 150 160 170 180
80 90 100 110 120 130
pF1KE6 KNASNMEYRINKPRAEDSGEYHCVYHFVSAPKANATIEVKAAPDITGHKRSENKNEGQDA
... :..... .. ::: :: :. : ..:.:.... : . . : ::. :::. :
NP_001 LPGQKTEFKVDSD--DQWGEYSCV--FLPEPMGTANIQLHGPPRVKAVKSSEHINEGETA
190 200 210 220 230
140 150 160 170 180 190
pF1KE6 TMYCKSVGYPH-PDWIWRKKENGMPMDIVNTS-GRFFIINKENYTELNIVNLQITEDPGE
. ::: . : :: : : .. ..: : .:::. .... .::.: ::.. :::.
NP_001 MLVCKSESVPPVTDWAWYKITDSEDKALMNGSESRFFVSSSQGRSELHIENLNMEADPGQ
240 250 260 270 280 290
200 210 220 230 240 250
pF1KE6 YECNATNAIGSASVVTVLRVRSHLAPLWPFLGILAEIIILVVIIVVYEKRKRPDEVPDDD
:.::.:.. :: ... .:::::::: :::::::.::...::.:: .::::..:..: :::
NP_001 YRCNGTSSKGSDQAIITLRVRSHLAALWPFLGIVAEVLVLVTIIFIYEKRRKPEDVLDDD
300 310 320 330 340 350
260 270 280
pF1KE6 EP-AGPMKTNSTN-NHKDKNLRQRNTN
. ..:.:... . : : ::.::::..
NP_001 DAGSAPLKSSGQHQNDKGKNVRQRNSS
360 370 380
>>NP_940993 (OMIM: 109480,111380) basigin isoform 4 [Hom (205 aa)
initn: 498 init1: 363 opt: 556 Z-score: 474.1 bits: 95.1 E(85289): 1.1e-19
Smith-Waterman score: 556; 42.6% identity (74.6% similar) in 209 aa overlap (79-282:3-205)
50 60 70 80 90 100
pF1KE6 PVTLQCNLTSSSHTLTYSYWTKNGVELSATRKNASNMEYRINKPRAEDS-GEYHCVYHFV
...:: .: :.. ..:. ::: :: :.
NP_940 MKQSDASPQE-RVD---SDDQWGEYSCV--FL
10 20
110 120 130 140 150 160
pF1KE6 SAPKANATIEVKAAPDITGHKRSENKNEGQDATMYCKSVGYPH-PDWIWRKKENGMPMDI
: ..:.:.... : . . : ::. :::. : . ::: . : :: : : .. .
NP_940 PEPMGTANIQLHGPPRVKAVKSSEHINEGETAMLVCKSESVPPVTDWAWYKITDSEDKAL
30 40 50 60 70 80
170 180 190 200 210 220
pF1KE6 VNTS-GRFFIINKENYTELNIVNLQITEDPGEYECNATNAIGSASVVTVLRVRSHLAPLW
.: : .:::. .... .::.: ::.. :::.:.::.:.. :: ... .:::::::: ::
NP_940 MNGSESRFFVSSSQGRSELHIENLNMEADPGQYRCNGTSSKGSDQAIITLRVRSHLAALW
90 100 110 120 130 140
230 240 250 260 270 280
pF1KE6 PFLGILAEIIILVVIIVVYEKRKRPDEVPDDDEP-AGPMKTNSTN-NHKDKNLRQRNTN
:::::.::...::.:: .::::..:..: :::. ..:.:... . : : ::.::::..
NP_940 PFLGIVAEVLVLVTIIFIYEKRRKPEDVLDDDDAGSAPLKSSGQHQNDKGKNVRQRNSS
150 160 170 180 190 200
282 residues in 1 query sequences
60827320 residues in 85289 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Tue Nov 8 15:02:37 2016 done: Tue Nov 8 15:02:38 2016
Total Scan time: 6.130 Total Display time: 0.000
Function used was FASTA [36.3.4 Apr, 2011]