Result of FASTA (omim) for
pFN21AE6639
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KE6639, 250 aa
1>>>pF1KE6639 250 - 250 aa - 250 aa
Library: /omim/omim.rfq.tfa
60827320 residues in 85289 sequences
Statistics: Expectation_n fit: rho(ln(x))= 11.0446+/-0.000456; mu= -10.5898+/- 0.028
mean_var=396.8213+/-82.429, 0's: 0 Z-trim(121.2): 61 B-trim: 568 in 1/56
Lambda= 0.064384
statistics sampled from 37432 (37508) to 37432 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.74), E-opt: 0.2 (0.44), width: 16
Scan time: 6.370
The best scores are: opt bits E(85289)
NP_001036247 (OMIM: 600692,601680) troponin T, fas ( 250) 1602 162.1 8.7e-40
NP_001284575 (OMIM: 600692,601680) troponin T, fas ( 250) 1602 162.1 8.7e-40
XP_016873699 (OMIM: 600692,601680) PREDICTED: trop ( 254) 1584 160.4 2.8e-39
XP_006718359 (OMIM: 600692,601680) PREDICTED: trop ( 257) 1578 159.9 4.1e-39
XP_016873698 (OMIM: 600692,601680) PREDICTED: trop ( 257) 1578 159.9 4.1e-39
NP_006748 (OMIM: 600692,601680) troponin T, fast s ( 258) 1576 159.7 4.7e-39
XP_016873700 (OMIM: 600692,601680) PREDICTED: trop ( 252) 1566 158.7 8.9e-39
NP_001036246 (OMIM: 600692,601680) troponin T, fas ( 256) 1564 158.6 1e-38
XP_006718362 (OMIM: 600692,601680) PREDICTED: trop ( 249) 1558 158.0 1.5e-38
XP_016873701 (OMIM: 600692,601680) PREDICTED: trop ( 251) 1553 157.5 2e-38
XP_006718363 (OMIM: 600692,601680) PREDICTED: trop ( 245) 1552 157.4 2.1e-38
XP_016873707 (OMIM: 600692,601680) PREDICTED: trop ( 252) 1543 156.6 3.9e-38
NP_001036245 (OMIM: 600692,601680) troponin T, fas ( 250) 1541 156.4 4.4e-38
XP_016873706 (OMIM: 600692,601680) PREDICTED: trop ( 256) 1525 154.9 1.3e-37
XP_016873702 (OMIM: 600692,601680) PREDICTED: trop ( 246) 1513 153.8 2.6e-37
XP_006718356 (OMIM: 600692,601680) PREDICTED: trop ( 261) 1509 153.5 3.6e-37
XP_016873694 (OMIM: 600692,601680) PREDICTED: trop ( 256) 1503 152.9 5.2e-37
XP_016873704 (OMIM: 600692,601680) PREDICTED: trop ( 243) 1497 152.3 7.3e-37
XP_016873697 (OMIM: 600692,601680) PREDICTED: trop ( 262) 1493 152.0 1e-36
XP_016873705 (OMIM: 600692,601680) PREDICTED: trop ( 263) 1493 152.0 1e-36
XP_016873696 (OMIM: 600692,601680) PREDICTED: trop ( 265) 1493 152.0 1e-36
XP_011518645 (OMIM: 600692,601680) PREDICTED: trop ( 269) 1493 152.0 1e-36
XP_006718353 (OMIM: 600692,601680) PREDICTED: trop ( 269) 1493 152.0 1e-36
XP_016873695 (OMIM: 600692,601680) PREDICTED: trop ( 269) 1493 152.0 1e-36
XP_016873703 (OMIM: 600692,601680) PREDICTED: trop ( 245) 1491 151.8 1.1e-36
XP_016873708 (OMIM: 600692,601680) PREDICTED: trop ( 239) 1471 149.9 3.9e-36
XP_006718365 (OMIM: 600692,601680) PREDICTED: trop ( 239) 1466 149.4 5.3e-36
XP_006718351 (OMIM: 600692,601680) PREDICTED: trop ( 274) 1449 147.9 1.8e-35
XP_006718357 (OMIM: 600692,601680) PREDICTED: trop ( 261) 1448 147.8 1.8e-35
NP_001119605 (OMIM: 191041,605355) troponin T, slo ( 251) 1072 112.8 5.7e-25
NP_001278703 (OMIM: 191041,605355) troponin T, slo ( 251) 1072 112.8 5.7e-25
XP_011525548 (OMIM: 191041,605355) PREDICTED: trop ( 258) 1045 110.3 3.3e-24
XP_016882676 (OMIM: 191041,605355) PREDICTED: trop ( 258) 1045 110.3 3.3e-24
NP_001119604 (OMIM: 191041,605355) troponin T, slo ( 262) 1034 109.3 6.8e-24
XP_016882675 (OMIM: 191041,605355) PREDICTED: trop ( 262) 1034 109.3 6.8e-24
NP_001001431 (OMIM: 115195,191045,601494,612422) t ( 285) 994 105.7 9.5e-23
XP_016857706 (OMIM: 115195,191045,601494,612422) P ( 285) 994 105.7 9.5e-23
NP_000355 (OMIM: 115195,191045,601494,612422) trop ( 295) 994 105.7 9.8e-23
XP_011508243 (OMIM: 115195,191045,601494,612422) P ( 296) 990 105.3 1.3e-22
XP_011508246 (OMIM: 115195,191045,601494,612422) P ( 282) 985 104.8 1.7e-22
NP_001001432 (OMIM: 115195,191045,601494,612422) t ( 282) 985 104.8 1.7e-22
XP_006711572 (OMIM: 115195,191045,601494,612422) P ( 287) 985 104.8 1.7e-22
XP_016857705 (OMIM: 115195,191045,601494,612422) P ( 287) 985 104.8 1.7e-22
XP_011508242 (OMIM: 115195,191045,601494,612422) P ( 297) 985 104.8 1.8e-22
XP_011508241 (OMIM: 115195,191045,601494,612422) P ( 297) 985 104.8 1.8e-22
XP_011508245 (OMIM: 115195,191045,601494,612422) P ( 283) 980 104.3 2.3e-22
XP_011508244 (OMIM: 115195,191045,601494,612422) P ( 283) 980 104.3 2.3e-22
NP_001263276 (OMIM: 115195,191045,601494,612422) t ( 288) 980 104.4 2.4e-22
NP_001001430 (OMIM: 115195,191045,601494,612422) t ( 288) 980 104.4 2.4e-22
XP_006711571 (OMIM: 115195,191045,601494,612422) P ( 288) 980 104.4 2.4e-22
>>NP_001036247 (OMIM: 600692,601680) troponin T, fast sk (250 aa)
initn: 1602 init1: 1602 opt: 1602 Z-score: 835.3 bits: 162.1 E(85289): 8.7e-40
Smith-Waterman score: 1602; 100.0% identity (100.0% similar) in 250 aa overlap (1-250:1-250)
10 20 30 40 50 60
pF1KE6 MSDEEVEQVEEQYEEEEEAQEEEEVQEEEKPRPKLTAPKIPEGEKVDFDDIQKKRQNKDL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MSDEEVEQVEEQYEEEEEAQEEEEVQEEEKPRPKLTAPKIPEGEKVDFDDIQKKRQNKDL
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE6 MELQALIDSHFEARKKEEEELVALKERIEKRRAERAEQQRIRAEKERERQNRLAEEKARR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MELQALIDSHFEARKKEEEELVALKERIEKRRAERAEQQRIRAEKERERQNRLAEEKARR
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE6 EEEDAKRRAEDDLKKKKALSSMGANYSSYLAKADQKRGKKQTAREMKKKILAERRKPLNI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 EEEDAKRRAEDDLKKKKALSSMGANYSSYLAKADQKRGKKQTAREMKKKILAERRKPLNI
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE6 DHLGEDKLRDKAKELWETLHQLEIDKFEFGEKLKRQKYDITTLRSRIDQAQKHSKKAGTP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 DHLGEDKLRDKAKELWETLHQLEIDKFEFGEKLKRQKYDITTLRSRIDQAQKHSKKAGTP
190 200 210 220 230 240
250
pF1KE6 AKGKVGGRWK
::::::::::
NP_001 AKGKVGGRWK
250
>>NP_001284575 (OMIM: 600692,601680) troponin T, fast sk (250 aa)
initn: 1602 init1: 1602 opt: 1602 Z-score: 835.3 bits: 162.1 E(85289): 8.7e-40
Smith-Waterman score: 1602; 100.0% identity (100.0% similar) in 250 aa overlap (1-250:1-250)
10 20 30 40 50 60
pF1KE6 MSDEEVEQVEEQYEEEEEAQEEEEVQEEEKPRPKLTAPKIPEGEKVDFDDIQKKRQNKDL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MSDEEVEQVEEQYEEEEEAQEEEEVQEEEKPRPKLTAPKIPEGEKVDFDDIQKKRQNKDL
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE6 MELQALIDSHFEARKKEEEELVALKERIEKRRAERAEQQRIRAEKERERQNRLAEEKARR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MELQALIDSHFEARKKEEEELVALKERIEKRRAERAEQQRIRAEKERERQNRLAEEKARR
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE6 EEEDAKRRAEDDLKKKKALSSMGANYSSYLAKADQKRGKKQTAREMKKKILAERRKPLNI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 EEEDAKRRAEDDLKKKKALSSMGANYSSYLAKADQKRGKKQTAREMKKKILAERRKPLNI
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE6 DHLGEDKLRDKAKELWETLHQLEIDKFEFGEKLKRQKYDITTLRSRIDQAQKHSKKAGTP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 DHLGEDKLRDKAKELWETLHQLEIDKFEFGEKLKRQKYDITTLRSRIDQAQKHSKKAGTP
190 200 210 220 230 240
250
pF1KE6 AKGKVGGRWK
::::::::::
NP_001 AKGKVGGRWK
250
>>XP_016873699 (OMIM: 600692,601680) PREDICTED: troponin (254 aa)
initn: 1515 init1: 1515 opt: 1584 Z-score: 826.2 bits: 160.4 E(85289): 2.8e-39
Smith-Waterman score: 1584; 98.4% identity (98.4% similar) in 254 aa overlap (1-250:1-254)
10 20 30 40 50
pF1KE6 MSDEEVEQVEEQYEEEEEAQEE----EEVQEEEKPRPKLTAPKIPEGEKVDFDDIQKKRQ
:::::::::::::::::::::: ::::::::::::::::::::::::::::::::::
XP_016 MSDEEVEQVEEQYEEEEEAQEEVHEPEEVQEEEKPRPKLTAPKIPEGEKVDFDDIQKKRQ
10 20 30 40 50 60
60 70 80 90 100 110
pF1KE6 NKDLMELQALIDSHFEARKKEEEELVALKERIEKRRAERAEQQRIRAEKERERQNRLAEE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 NKDLMELQALIDSHFEARKKEEEELVALKERIEKRRAERAEQQRIRAEKERERQNRLAEE
70 80 90 100 110 120
120 130 140 150 160 170
pF1KE6 KARREEEDAKRRAEDDLKKKKALSSMGANYSSYLAKADQKRGKKQTAREMKKKILAERRK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 KARREEEDAKRRAEDDLKKKKALSSMGANYSSYLAKADQKRGKKQTAREMKKKILAERRK
130 140 150 160 170 180
180 190 200 210 220 230
pF1KE6 PLNIDHLGEDKLRDKAKELWETLHQLEIDKFEFGEKLKRQKYDITTLRSRIDQAQKHSKK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 PLNIDHLGEDKLRDKAKELWETLHQLEIDKFEFGEKLKRQKYDITTLRSRIDQAQKHSKK
190 200 210 220 230 240
240 250
pF1KE6 AGTPAKGKVGGRWK
::::::::::::::
XP_016 AGTPAKGKVGGRWK
250
>>XP_006718359 (OMIM: 600692,601680) PREDICTED: troponin (257 aa)
initn: 1519 init1: 1519 opt: 1578 Z-score: 823.1 bits: 159.9 E(85289): 4.1e-39
Smith-Waterman score: 1578; 97.3% identity (97.3% similar) in 257 aa overlap (1-250:1-257)
10 20 30 40 50
pF1KE6 MSDEEVEQVEEQYEEEEEAQEE-------EEVQEEEKPRPKLTAPKIPEGEKVDFDDIQK
:::::::::::::::::::::: :::::::::::::::::::::::::::::::
XP_006 MSDEEVEQVEEQYEEEEEAQEEAAEVHEEEEVQEEEKPRPKLTAPKIPEGEKVDFDDIQK
10 20 30 40 50 60
60 70 80 90 100 110
pF1KE6 KRQNKDLMELQALIDSHFEARKKEEEELVALKERIEKRRAERAEQQRIRAEKERERQNRL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 KRQNKDLMELQALIDSHFEARKKEEEELVALKERIEKRRAERAEQQRIRAEKERERQNRL
70 80 90 100 110 120
120 130 140 150 160 170
pF1KE6 AEEKARREEEDAKRRAEDDLKKKKALSSMGANYSSYLAKADQKRGKKQTAREMKKKILAE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 AEEKARREEEDAKRRAEDDLKKKKALSSMGANYSSYLAKADQKRGKKQTAREMKKKILAE
130 140 150 160 170 180
180 190 200 210 220 230
pF1KE6 RRKPLNIDHLGEDKLRDKAKELWETLHQLEIDKFEFGEKLKRQKYDITTLRSRIDQAQKH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 RRKPLNIDHLGEDKLRDKAKELWETLHQLEIDKFEFGEKLKRQKYDITTLRSRIDQAQKH
190 200 210 220 230 240
240 250
pF1KE6 SKKAGTPAKGKVGGRWK
:::::::::::::::::
XP_006 SKKAGTPAKGKVGGRWK
250
>>XP_016873698 (OMIM: 600692,601680) PREDICTED: troponin (257 aa)
initn: 1519 init1: 1519 opt: 1578 Z-score: 823.1 bits: 159.9 E(85289): 4.1e-39
Smith-Waterman score: 1578; 97.3% identity (97.3% similar) in 257 aa overlap (1-250:1-257)
10 20 30 40 50
pF1KE6 MSDEEVEQVEEQYEEEEEAQEE-------EEVQEEEKPRPKLTAPKIPEGEKVDFDDIQK
:::::::::::::::::::::: :::::::::::::::::::::::::::::::
XP_016 MSDEEVEQVEEQYEEEEEAQEEAAEVHEEEEVQEEEKPRPKLTAPKIPEGEKVDFDDIQK
10 20 30 40 50 60
60 70 80 90 100 110
pF1KE6 KRQNKDLMELQALIDSHFEARKKEEEELVALKERIEKRRAERAEQQRIRAEKERERQNRL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 KRQNKDLMELQALIDSHFEARKKEEEELVALKERIEKRRAERAEQQRIRAEKERERQNRL
70 80 90 100 110 120
120 130 140 150 160 170
pF1KE6 AEEKARREEEDAKRRAEDDLKKKKALSSMGANYSSYLAKADQKRGKKQTAREMKKKILAE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 AEEKARREEEDAKRRAEDDLKKKKALSSMGANYSSYLAKADQKRGKKQTAREMKKKILAE
130 140 150 160 170 180
180 190 200 210 220 230
pF1KE6 RRKPLNIDHLGEDKLRDKAKELWETLHQLEIDKFEFGEKLKRQKYDITTLRSRIDQAQKH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 RRKPLNIDHLGEDKLRDKAKELWETLHQLEIDKFEFGEKLKRQKYDITTLRSRIDQAQKH
190 200 210 220 230 240
240 250
pF1KE6 SKKAGTPAKGKVGGRWK
:::::::::::::::::
XP_016 SKKAGTPAKGKVGGRWK
250
>>NP_006748 (OMIM: 600692,601680) troponin T, fast skele (258 aa)
initn: 1478 init1: 1478 opt: 1576 Z-score: 822.1 bits: 159.7 E(85289): 4.7e-39
Smith-Waterman score: 1576; 96.9% identity (96.9% similar) in 258 aa overlap (1-250:1-258)
10 20 30 40 50
pF1KE6 MSDEEVEQVEEQYEEEEEAQEEEEVQE--------EEKPRPKLTAPKIPEGEKVDFDDIQ
::::::::::::::::::::::::::: :::::::::::::::::::::::::
NP_006 MSDEEVEQVEEQYEEEEEAQEEEEVQEDTAEEDAEEEKPRPKLTAPKIPEGEKVDFDDIQ
10 20 30 40 50 60
60 70 80 90 100 110
pF1KE6 KKRQNKDLMELQALIDSHFEARKKEEEELVALKERIEKRRAERAEQQRIRAEKERERQNR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_006 KKRQNKDLMELQALIDSHFEARKKEEEELVALKERIEKRRAERAEQQRIRAEKERERQNR
70 80 90 100 110 120
120 130 140 150 160 170
pF1KE6 LAEEKARREEEDAKRRAEDDLKKKKALSSMGANYSSYLAKADQKRGKKQTAREMKKKILA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_006 LAEEKARREEEDAKRRAEDDLKKKKALSSMGANYSSYLAKADQKRGKKQTAREMKKKILA
130 140 150 160 170 180
180 190 200 210 220 230
pF1KE6 ERRKPLNIDHLGEDKLRDKAKELWETLHQLEIDKFEFGEKLKRQKYDITTLRSRIDQAQK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_006 ERRKPLNIDHLGEDKLRDKAKELWETLHQLEIDKFEFGEKLKRQKYDITTLRSRIDQAQK
190 200 210 220 230 240
240 250
pF1KE6 HSKKAGTPAKGKVGGRWK
::::::::::::::::::
NP_006 HSKKAGTPAKGKVGGRWK
250
>>XP_016873700 (OMIM: 600692,601680) PREDICTED: troponin (252 aa)
initn: 1461 init1: 1461 opt: 1566 Z-score: 817.2 bits: 158.7 E(85289): 8.9e-39
Smith-Waterman score: 1566; 98.4% identity (98.8% similar) in 252 aa overlap (1-250:1-252)
10 20 30 40 50
pF1KE6 MSDEEVEQVEEQYEEEEEAQEEE-EV-QEEEKPRPKLTAPKIPEGEKVDFDDIQKKRQNK
:::::::::::::::::::::: :: .::::::::::::::::::::::::::::::::
XP_016 MSDEEVEQVEEQYEEEEEAQEEAAEVHEEEEKPRPKLTAPKIPEGEKVDFDDIQKKRQNK
10 20 30 40 50 60
60 70 80 90 100 110
pF1KE6 DLMELQALIDSHFEARKKEEEELVALKERIEKRRAERAEQQRIRAEKERERQNRLAEEKA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 DLMELQALIDSHFEARKKEEEELVALKERIEKRRAERAEQQRIRAEKERERQNRLAEEKA
70 80 90 100 110 120
120 130 140 150 160 170
pF1KE6 RREEEDAKRRAEDDLKKKKALSSMGANYSSYLAKADQKRGKKQTAREMKKKILAERRKPL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 RREEEDAKRRAEDDLKKKKALSSMGANYSSYLAKADQKRGKKQTAREMKKKILAERRKPL
130 140 150 160 170 180
180 190 200 210 220 230
pF1KE6 NIDHLGEDKLRDKAKELWETLHQLEIDKFEFGEKLKRQKYDITTLRSRIDQAQKHSKKAG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 NIDHLGEDKLRDKAKELWETLHQLEIDKFEFGEKLKRQKYDITTLRSRIDQAQKHSKKAG
190 200 210 220 230 240
240 250
pF1KE6 TPAKGKVGGRWK
::::::::::::
XP_016 TPAKGKVGGRWK
250
>>NP_001036246 (OMIM: 600692,601680) troponin T, fast sk (256 aa)
initn: 1468 init1: 1468 opt: 1564 Z-score: 816.1 bits: 158.6 E(85289): 1e-38
Smith-Waterman score: 1564; 97.3% identity (97.7% similar) in 256 aa overlap (1-250:1-256)
10 20 30 40 50
pF1KE6 MSDEEVEQVEEQYEEEEEAQEE-----EEVQE-EEKPRPKLTAPKIPEGEKVDFDDIQKK
:::::::::::::::::::::: :::.: :::::::::::::::::::::::::::
NP_001 MSDEEVEQVEEQYEEEEEAQEEAAEVHEEVHEPEEKPRPKLTAPKIPEGEKVDFDDIQKK
10 20 30 40 50 60
60 70 80 90 100 110
pF1KE6 RQNKDLMELQALIDSHFEARKKEEEELVALKERIEKRRAERAEQQRIRAEKERERQNRLA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 RQNKDLMELQALIDSHFEARKKEEEELVALKERIEKRRAERAEQQRIRAEKERERQNRLA
70 80 90 100 110 120
120 130 140 150 160 170
pF1KE6 EEKARREEEDAKRRAEDDLKKKKALSSMGANYSSYLAKADQKRGKKQTAREMKKKILAER
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 EEKARREEEDAKRRAEDDLKKKKALSSMGANYSSYLAKADQKRGKKQTAREMKKKILAER
130 140 150 160 170 180
180 190 200 210 220 230
pF1KE6 RKPLNIDHLGEDKLRDKAKELWETLHQLEIDKFEFGEKLKRQKYDITTLRSRIDQAQKHS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 RKPLNIDHLGEDKLRDKAKELWETLHQLEIDKFEFGEKLKRQKYDITTLRSRIDQAQKHS
190 200 210 220 230 240
240 250
pF1KE6 KKAGTPAKGKVGGRWK
::::::::::::::::
NP_001 KKAGTPAKGKVGGRWK
250
>>XP_006718362 (OMIM: 600692,601680) PREDICTED: troponin (249 aa)
initn: 1471 init1: 1471 opt: 1558 Z-score: 813.2 bits: 158.0 E(85289): 1.5e-38
Smith-Waterman score: 1558; 98.4% identity (98.8% similar) in 251 aa overlap (1-250:1-249)
10 20 30 40 50
pF1KE6 MSDEEVEQVEEQYEEEEEAQEEEEVQE-EEKPRPKLTAPKIPEGEKVDFDDIQKKRQNKD
::::::::::::::::::::: ::.: ::::::::::::::::::::::::::::::::
XP_006 MSDEEVEQVEEQYEEEEEAQE--EVHEPEEKPRPKLTAPKIPEGEKVDFDDIQKKRQNKD
10 20 30 40 50
60 70 80 90 100 110
pF1KE6 LMELQALIDSHFEARKKEEEELVALKERIEKRRAERAEQQRIRAEKERERQNRLAEEKAR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 LMELQALIDSHFEARKKEEEELVALKERIEKRRAERAEQQRIRAEKERERQNRLAEEKAR
60 70 80 90 100 110
120 130 140 150 160 170
pF1KE6 REEEDAKRRAEDDLKKKKALSSMGANYSSYLAKADQKRGKKQTAREMKKKILAERRKPLN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 REEEDAKRRAEDDLKKKKALSSMGANYSSYLAKADQKRGKKQTAREMKKKILAERRKPLN
120 130 140 150 160 170
180 190 200 210 220 230
pF1KE6 IDHLGEDKLRDKAKELWETLHQLEIDKFEFGEKLKRQKYDITTLRSRIDQAQKHSKKAGT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 IDHLGEDKLRDKAKELWETLHQLEIDKFEFGEKLKRQKYDITTLRSRIDQAQKHSKKAGT
180 190 200 210 220 230
240 250
pF1KE6 PAKGKVGGRWK
:::::::::::
XP_006 PAKGKVGGRWK
240
>>XP_016873701 (OMIM: 600692,601680) PREDICTED: troponin (251 aa)
initn: 1505 init1: 1505 opt: 1553 Z-score: 810.7 bits: 157.5 E(85289): 2e-38
Smith-Waterman score: 1553; 97.2% identity (98.8% similar) in 251 aa overlap (1-250:1-251)
10 20 30 40 50
pF1KE6 MSDEEVEQVEEQYEEEE-EAQEEEEVQEEEKPRPKLTAPKIPEGEKVDFDDIQKKRQNKD
:::::::::::. .:: :..:::::::::::::::::::::::::::::::::::::::
XP_016 MSDEEVEQVEEEAQEEAAEVHEEEEVQEEEKPRPKLTAPKIPEGEKVDFDDIQKKRQNKD
10 20 30 40 50 60
60 70 80 90 100 110
pF1KE6 LMELQALIDSHFEARKKEEEELVALKERIEKRRAERAEQQRIRAEKERERQNRLAEEKAR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 LMELQALIDSHFEARKKEEEELVALKERIEKRRAERAEQQRIRAEKERERQNRLAEEKAR
70 80 90 100 110 120
120 130 140 150 160 170
pF1KE6 REEEDAKRRAEDDLKKKKALSSMGANYSSYLAKADQKRGKKQTAREMKKKILAERRKPLN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 REEEDAKRRAEDDLKKKKALSSMGANYSSYLAKADQKRGKKQTAREMKKKILAERRKPLN
130 140 150 160 170 180
180 190 200 210 220 230
pF1KE6 IDHLGEDKLRDKAKELWETLHQLEIDKFEFGEKLKRQKYDITTLRSRIDQAQKHSKKAGT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 IDHLGEDKLRDKAKELWETLHQLEIDKFEFGEKLKRQKYDITTLRSRIDQAQKHSKKAGT
190 200 210 220 230 240
240 250
pF1KE6 PAKGKVGGRWK
:::::::::::
XP_016 PAKGKVGGRWK
250
250 residues in 1 query sequences
60827320 residues in 85289 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Tue Nov 8 15:00:57 2016 done: Tue Nov 8 15:00:58 2016
Total Scan time: 6.370 Total Display time: -0.020
Function used was FASTA [36.3.4 Apr, 2011]