Result of FASTA (omim) for
pFN21AE6638
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KE6638, 237 aa
1>>>pF1KE6638 237 - 237 aa - 237 aa
Library: /omim/omim.rfq.tfa
60827320 residues in 85289 sequences
Statistics: Expectation_n fit: rho(ln(x))= 4.7446+/-0.000384; mu= 17.5855+/- 0.024
mean_var=65.8653+/-13.181, 0's: 0 Z-trim(113.0): 99 B-trim: 59 in 1/49
Lambda= 0.158032
statistics sampled from 22049 (22149) to 22049 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.634), E-opt: 0.2 (0.26), width: 16
Scan time: 4.740
The best scores are: opt bits E(85289)
NP_068580 (OMIM: 606251) polypeptide N-acetylgalac ( 237) 1656 386.2 2.7e-107
XP_016874863 (OMIM: 606251) PREDICTED: polypeptide ( 460) 1656 386.4 4.4e-107
XP_016874861 (OMIM: 606251) PREDICTED: polypeptide ( 500) 1656 386.5 4.7e-107
XP_016874862 (OMIM: 606251) PREDICTED: polypeptide ( 500) 1656 386.5 4.7e-107
XP_016874860 (OMIM: 606251) PREDICTED: polypeptide ( 502) 1656 386.5 4.7e-107
NP_001116108 (OMIM: 606251) polypeptide N-acetylga ( 603) 1656 386.5 5.4e-107
NP_071924 (OMIM: 615137) putative polypeptide N-ac ( 598) 1038 245.6 1.4e-64
XP_011518370 (OMIM: 615136) PREDICTED: polypeptide ( 430) 844 201.3 2.2e-51
NP_940918 (OMIM: 615136) polypeptide N-acetylgalac ( 607) 844 201.4 2.9e-51
NP_059113 (OMIM: 606250) probable polypeptide N-ac ( 637) 757 181.6 2.8e-45
XP_011514769 (OMIM: 615137) PREDICTED: putative po ( 504) 700 168.5 1.9e-41
XP_006718287 (OMIM: 615136) PREDICTED: polypeptide ( 545) 563 137.3 5.2e-32
XP_006717350 (OMIM: 608812,610290) PREDICTED: poly ( 284) 385 96.5 5.2e-20
XP_011517322 (OMIM: 608812,610290) PREDICTED: poly ( 345) 385 96.5 6e-20
XP_016870622 (OMIM: 608812,610290) PREDICTED: poly ( 497) 385 96.7 7.9e-20
XP_006719277 (OMIM: 605148) PREDICTED: polypeptide ( 622) 386 97.0 8e-20
NP_009141 (OMIM: 605148) polypeptide N-acetylgalac ( 622) 386 97.0 8e-20
XP_011536121 (OMIM: 605148) PREDICTED: polypeptide ( 622) 386 97.0 8e-20
XP_016874234 (OMIM: 605148) PREDICTED: polypeptide ( 622) 386 97.0 8e-20
XP_016874233 (OMIM: 605148) PREDICTED: polypeptide ( 622) 386 97.0 8e-20
XP_011536124 (OMIM: 605148) PREDICTED: polypeptide ( 622) 386 97.0 8e-20
XP_005268664 (OMIM: 605148) PREDICTED: polypeptide ( 622) 386 97.0 8e-20
XP_011517320 (OMIM: 608812,610290) PREDICTED: poly ( 507) 385 96.7 8.1e-20
NP_003765 (OMIM: 603565) polypeptide N-acetylgalac ( 578) 385 96.7 8.9e-20
NP_078918 (OMIM: 608812,610290) polypeptide N-acet ( 581) 385 96.7 8.9e-20
XP_016858752 (OMIM: 608369) PREDICTED: polypeptide ( 375) 367 92.5 1.1e-18
XP_016858751 (OMIM: 608369) PREDICTED: polypeptide ( 380) 367 92.5 1.1e-18
XP_011508840 (OMIM: 608369) PREDICTED: polypeptide ( 390) 367 92.5 1.1e-18
XP_016858750 (OMIM: 608369) PREDICTED: polypeptide ( 556) 367 92.6 1.5e-18
NP_443149 (OMIM: 608369) polypeptide N-acetylgalac ( 556) 367 92.6 1.5e-18
XP_016858749 (OMIM: 608369) PREDICTED: polypeptide ( 561) 367 92.6 1.5e-18
NP_001288556 (OMIM: 608369) polypeptide N-acetylga ( 561) 367 92.6 1.5e-18
XP_016858748 (OMIM: 608369) PREDICTED: polypeptide ( 571) 367 92.6 1.5e-18
XP_011508839 (OMIM: 608369) PREDICTED: polypeptide ( 571) 367 92.6 1.5e-18
XP_016858747 (OMIM: 608369) PREDICTED: polypeptide ( 571) 367 92.6 1.5e-18
XP_016881181 (OMIM: 602273) PREDICTED: polypeptide ( 559) 363 91.7 2.8e-18
XP_005258296 (OMIM: 602273) PREDICTED: polypeptide ( 559) 363 91.7 2.8e-18
NP_065207 (OMIM: 602273) polypeptide N-acetylgalac ( 559) 363 91.7 2.8e-18
NP_001316024 (OMIM: 608225) polypeptide N-acetylga ( 517) 359 90.8 5e-18
NP_001316025 (OMIM: 608225) polypeptide N-acetylga ( 532) 359 90.8 5.1e-18
NP_001240756 (OMIM: 608225) polypeptide N-acetylga ( 532) 359 90.8 5.1e-18
NP_078848 (OMIM: 608225) polypeptide N-acetylgalac ( 552) 359 90.8 5.2e-18
NP_001240755 (OMIM: 608225) polypeptide N-acetylga ( 557) 359 90.8 5.3e-18
XP_016860395 (OMIM: 608225) PREDICTED: polypeptide ( 563) 359 90.8 5.3e-18
XP_016856455 (OMIM: 602274) PREDICTED: polypeptide ( 569) 345 87.6 4.9e-17
XP_016856454 (OMIM: 602274) PREDICTED: polypeptide ( 598) 345 87.6 5.1e-17
XP_016856453 (OMIM: 602274) PREDICTED: polypeptide ( 605) 345 87.6 5.1e-17
XP_016856452 (OMIM: 602274) PREDICTED: polypeptide ( 636) 345 87.6 5.3e-17
NP_001278795 (OMIM: 602274) polypeptide N-acetylga ( 533) 343 87.1 6.4e-17
NP_004472 (OMIM: 602274) polypeptide N-acetylgalac ( 571) 343 87.1 6.7e-17
>>NP_068580 (OMIM: 606251) polypeptide N-acetylgalactosa (237 aa)
initn: 1656 init1: 1656 opt: 1656 Z-score: 2047.4 bits: 386.2 E(85289): 2.7e-107
Smith-Waterman score: 1656; 100.0% identity (100.0% similar) in 237 aa overlap (1-237:1-237)
10 20 30 40 50 60
pF1KE6 MEVLPCSRVAHIERTRKPYNNDIDYYAKRNALRAAEVWMDDFKSHVYMAWNIPMSNPGVD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_068 MEVLPCSRVAHIERTRKPYNNDIDYYAKRNALRAAEVWMDDFKSHVYMAWNIPMSNPGVD
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE6 FGDVSERLALRQRLKCRSFKWYLENVYPEMRVYNNTLTYGEVRNSKASAYCLDQGAEDGD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_068 FGDVSERLALRQRLKCRSFKWYLENVYPEMRVYNNTLTYGEVRNSKASAYCLDQGAEDGD
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE6 RAILYPCHGMSSQLVRYSADGLLQLGPLGSTAFLPDSKCLVDDGTGRMPTLKKCEDVARP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_068 RAILYPCHGMSSQLVRYSADGLLQLGPLGSTAFLPDSKCLVDDGTGRMPTLKKCEDVARP
130 140 150 160 170 180
190 200 210 220 230
pF1KE6 TQRLWDFTQSGPIVSRATGRCLEVEMSKDANFGLRLVVQRCSGQKWMIRNWIKHARH
:::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_068 TQRLWDFTQSGPIVSRATGRCLEVEMSKDANFGLRLVVQRCSGQKWMIRNWIKHARH
190 200 210 220 230
>>XP_016874863 (OMIM: 606251) PREDICTED: polypeptide N-a (460 aa)
initn: 1656 init1: 1656 opt: 1656 Z-score: 2043.5 bits: 386.4 E(85289): 4.4e-107
Smith-Waterman score: 1656; 100.0% identity (100.0% similar) in 237 aa overlap (1-237:224-460)
10 20 30
pF1KE6 MEVLPCSRVAHIERTRKPYNNDIDYYAKRN
::::::::::::::::::::::::::::::
XP_016 GDIGLLDPGMEVYGGENVELGMRVWQCGGSMEVLPCSRVAHIERTRKPYNNDIDYYAKRN
200 210 220 230 240 250
40 50 60 70 80 90
pF1KE6 ALRAAEVWMDDFKSHVYMAWNIPMSNPGVDFGDVSERLALRQRLKCRSFKWYLENVYPEM
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 ALRAAEVWMDDFKSHVYMAWNIPMSNPGVDFGDVSERLALRQRLKCRSFKWYLENVYPEM
260 270 280 290 300 310
100 110 120 130 140 150
pF1KE6 RVYNNTLTYGEVRNSKASAYCLDQGAEDGDRAILYPCHGMSSQLVRYSADGLLQLGPLGS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 RVYNNTLTYGEVRNSKASAYCLDQGAEDGDRAILYPCHGMSSQLVRYSADGLLQLGPLGS
320 330 340 350 360 370
160 170 180 190 200 210
pF1KE6 TAFLPDSKCLVDDGTGRMPTLKKCEDVARPTQRLWDFTQSGPIVSRATGRCLEVEMSKDA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 TAFLPDSKCLVDDGTGRMPTLKKCEDVARPTQRLWDFTQSGPIVSRATGRCLEVEMSKDA
380 390 400 410 420 430
220 230
pF1KE6 NFGLRLVVQRCSGQKWMIRNWIKHARH
:::::::::::::::::::::::::::
XP_016 NFGLRLVVQRCSGQKWMIRNWIKHARH
440 450 460
>>XP_016874861 (OMIM: 606251) PREDICTED: polypeptide N-a (500 aa)
initn: 1656 init1: 1656 opt: 1656 Z-score: 2043.0 bits: 386.5 E(85289): 4.7e-107
Smith-Waterman score: 1656; 100.0% identity (100.0% similar) in 237 aa overlap (1-237:264-500)
10 20 30
pF1KE6 MEVLPCSRVAHIERTRKPYNNDIDYYAKRN
::::::::::::::::::::::::::::::
XP_016 GDIGLLDPGMEVYGGENVELGMRVWQCGGSMEVLPCSRVAHIERTRKPYNNDIDYYAKRN
240 250 260 270 280 290
40 50 60 70 80 90
pF1KE6 ALRAAEVWMDDFKSHVYMAWNIPMSNPGVDFGDVSERLALRQRLKCRSFKWYLENVYPEM
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 ALRAAEVWMDDFKSHVYMAWNIPMSNPGVDFGDVSERLALRQRLKCRSFKWYLENVYPEM
300 310 320 330 340 350
100 110 120 130 140 150
pF1KE6 RVYNNTLTYGEVRNSKASAYCLDQGAEDGDRAILYPCHGMSSQLVRYSADGLLQLGPLGS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 RVYNNTLTYGEVRNSKASAYCLDQGAEDGDRAILYPCHGMSSQLVRYSADGLLQLGPLGS
360 370 380 390 400 410
160 170 180 190 200 210
pF1KE6 TAFLPDSKCLVDDGTGRMPTLKKCEDVARPTQRLWDFTQSGPIVSRATGRCLEVEMSKDA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 TAFLPDSKCLVDDGTGRMPTLKKCEDVARPTQRLWDFTQSGPIVSRATGRCLEVEMSKDA
420 430 440 450 460 470
220 230
pF1KE6 NFGLRLVVQRCSGQKWMIRNWIKHARH
:::::::::::::::::::::::::::
XP_016 NFGLRLVVQRCSGQKWMIRNWIKHARH
480 490 500
>>XP_016874862 (OMIM: 606251) PREDICTED: polypeptide N-a (500 aa)
initn: 1656 init1: 1656 opt: 1656 Z-score: 2043.0 bits: 386.5 E(85289): 4.7e-107
Smith-Waterman score: 1656; 100.0% identity (100.0% similar) in 237 aa overlap (1-237:264-500)
10 20 30
pF1KE6 MEVLPCSRVAHIERTRKPYNNDIDYYAKRN
::::::::::::::::::::::::::::::
XP_016 GDIGLLDPGMEVYGGENVELGMRVWQCGGSMEVLPCSRVAHIERTRKPYNNDIDYYAKRN
240 250 260 270 280 290
40 50 60 70 80 90
pF1KE6 ALRAAEVWMDDFKSHVYMAWNIPMSNPGVDFGDVSERLALRQRLKCRSFKWYLENVYPEM
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 ALRAAEVWMDDFKSHVYMAWNIPMSNPGVDFGDVSERLALRQRLKCRSFKWYLENVYPEM
300 310 320 330 340 350
100 110 120 130 140 150
pF1KE6 RVYNNTLTYGEVRNSKASAYCLDQGAEDGDRAILYPCHGMSSQLVRYSADGLLQLGPLGS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 RVYNNTLTYGEVRNSKASAYCLDQGAEDGDRAILYPCHGMSSQLVRYSADGLLQLGPLGS
360 370 380 390 400 410
160 170 180 190 200 210
pF1KE6 TAFLPDSKCLVDDGTGRMPTLKKCEDVARPTQRLWDFTQSGPIVSRATGRCLEVEMSKDA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 TAFLPDSKCLVDDGTGRMPTLKKCEDVARPTQRLWDFTQSGPIVSRATGRCLEVEMSKDA
420 430 440 450 460 470
220 230
pF1KE6 NFGLRLVVQRCSGQKWMIRNWIKHARH
:::::::::::::::::::::::::::
XP_016 NFGLRLVVQRCSGQKWMIRNWIKHARH
480 490 500
>>XP_016874860 (OMIM: 606251) PREDICTED: polypeptide N-a (502 aa)
initn: 1656 init1: 1656 opt: 1656 Z-score: 2043.0 bits: 386.5 E(85289): 4.7e-107
Smith-Waterman score: 1656; 100.0% identity (100.0% similar) in 237 aa overlap (1-237:266-502)
10 20 30
pF1KE6 MEVLPCSRVAHIERTRKPYNNDIDYYAKRN
::::::::::::::::::::::::::::::
XP_016 GDIGLLDPGMEVYGGENVELGMRVWQCGGSMEVLPCSRVAHIERTRKPYNNDIDYYAKRN
240 250 260 270 280 290
40 50 60 70 80 90
pF1KE6 ALRAAEVWMDDFKSHVYMAWNIPMSNPGVDFGDVSERLALRQRLKCRSFKWYLENVYPEM
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 ALRAAEVWMDDFKSHVYMAWNIPMSNPGVDFGDVSERLALRQRLKCRSFKWYLENVYPEM
300 310 320 330 340 350
100 110 120 130 140 150
pF1KE6 RVYNNTLTYGEVRNSKASAYCLDQGAEDGDRAILYPCHGMSSQLVRYSADGLLQLGPLGS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 RVYNNTLTYGEVRNSKASAYCLDQGAEDGDRAILYPCHGMSSQLVRYSADGLLQLGPLGS
360 370 380 390 400 410
160 170 180 190 200 210
pF1KE6 TAFLPDSKCLVDDGTGRMPTLKKCEDVARPTQRLWDFTQSGPIVSRATGRCLEVEMSKDA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 TAFLPDSKCLVDDGTGRMPTLKKCEDVARPTQRLWDFTQSGPIVSRATGRCLEVEMSKDA
420 430 440 450 460 470
220 230
pF1KE6 NFGLRLVVQRCSGQKWMIRNWIKHARH
:::::::::::::::::::::::::::
XP_016 NFGLRLVVQRCSGQKWMIRNWIKHARH
480 490 500
>>NP_001116108 (OMIM: 606251) polypeptide N-acetylgalact (603 aa)
initn: 1656 init1: 1656 opt: 1656 Z-score: 2041.9 bits: 386.5 E(85289): 5.4e-107
Smith-Waterman score: 1656; 100.0% identity (100.0% similar) in 237 aa overlap (1-237:367-603)
10 20 30
pF1KE6 MEVLPCSRVAHIERTRKPYNNDIDYYAKRN
::::::::::::::::::::::::::::::
NP_001 GDIGLLDPGMEVYGGENVELGMRVWQCGGSMEVLPCSRVAHIERTRKPYNNDIDYYAKRN
340 350 360 370 380 390
40 50 60 70 80 90
pF1KE6 ALRAAEVWMDDFKSHVYMAWNIPMSNPGVDFGDVSERLALRQRLKCRSFKWYLENVYPEM
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 ALRAAEVWMDDFKSHVYMAWNIPMSNPGVDFGDVSERLALRQRLKCRSFKWYLENVYPEM
400 410 420 430 440 450
100 110 120 130 140 150
pF1KE6 RVYNNTLTYGEVRNSKASAYCLDQGAEDGDRAILYPCHGMSSQLVRYSADGLLQLGPLGS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 RVYNNTLTYGEVRNSKASAYCLDQGAEDGDRAILYPCHGMSSQLVRYSADGLLQLGPLGS
460 470 480 490 500 510
160 170 180 190 200 210
pF1KE6 TAFLPDSKCLVDDGTGRMPTLKKCEDVARPTQRLWDFTQSGPIVSRATGRCLEVEMSKDA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 TAFLPDSKCLVDDGTGRMPTLKKCEDVARPTQRLWDFTQSGPIVSRATGRCLEVEMSKDA
520 530 540 550 560 570
220 230
pF1KE6 NFGLRLVVQRCSGQKWMIRNWIKHARH
:::::::::::::::::::::::::::
NP_001 NFGLRLVVQRCSGQKWMIRNWIKHARH
580 590 600
>>NP_071924 (OMIM: 615137) putative polypeptide N-acetyl (598 aa)
initn: 969 init1: 969 opt: 1038 Z-score: 1280.5 bits: 245.6 E(85289): 1.4e-64
Smith-Waterman score: 1038; 59.7% identity (83.3% similar) in 233 aa overlap (1-233:368-598)
10 20 30
pF1KE6 MEVLPCSRVAHIERTRKPYNNDIDYYAKRN
:::::::::::::: .::::..: .:.:::
NP_071 GEIGLLDPGMDVYGGENIELGIKVWLCGGSMEVLPCSRVAHIERKKKPYNSNIGFYTKRN
340 350 360 370 380 390
40 50 60 70 80 90
pF1KE6 ALRAAEVWMDDFKSHVYMAWNIPMSNPGVDFGDVSERLALRQRLKCRSFKWYLENVYPEM
:::.:::::::.:::::.:::.:. :::.:.:::::: :::. :::..:.:::..:::::
NP_071 ALRVAEVWMDDYKSHVYIAWNLPLENPGIDIGDVSERRALRKSLKCKNFQWYLDHVYPEM
400 410 420 430 440 450
100 110 120 130 140 150
pF1KE6 RVYNNTLTYGEVRNSKASAYCLDQGAEDGDRAILYPCHGMSSQLVRYSADGLLQLGPLGS
: ::::..:::.::.::. ::::: .. :::::::: . ::.::. .:.:.:: ::.
NP_071 RRYNNTVAYGELRNNKAKDVCLDQGPLENHTAILYPCHGWGPQLARYTKEGFLHLGALGT
460 470 480 490 500 510
160 170 180 190 200 210
pF1KE6 TAFLPDSKCLVDDGTGRMPTLKKCEDVARPTQRLWDFTQSGPIVSRATGRCLEVEMSKDA
:..:::..::::.. .:.: : :. : . :.: :.: :....:::::::: :
NP_071 TTLLPDTRCLVDNSKSRLPQLLDCDKVKSSLYKRWNFIQNGAIMNKGTGRCLEVENRGLA
520 530 540 550 560 570
220 230
pF1KE6 NFGLRLVVQRCSGQKWMIRNWIKHARH
:. :... :.::.: :.: ::
NP_071 --GIDLILRSCTGQRWTIKNSIK
580 590
>>XP_011518370 (OMIM: 615136) PREDICTED: polypeptide N-a (430 aa)
initn: 803 init1: 653 opt: 844 Z-score: 1043.3 bits: 201.3 E(85289): 2.2e-51
Smith-Waterman score: 844; 48.7% identity (78.6% similar) in 234 aa overlap (1-233:195-426)
10 20 30
pF1KE6 MEVLPCSRVAHIERTRKPYNNDIDYYAKRN
.:::::::.:::::..:::..:. ...::
XP_011 QEIGLLDEGMEVYGGENVELGIRVWQCGGSVEVLPCSRIAHIERAHKPYTEDLTAHVRRN
170 180 190 200 210 220
40 50 60 70 80 90
pF1KE6 ALRAAEVWMDDFKSHVYMAWNIPMSNPGVDFGDVSERLALRQRLKCRSFKWYLENVYPEM
:::.::::::.::::::::::::. . :.:.::.. : :::..:.:..:.::: .:::::
XP_011 ALRVAEVWMDEFKSHVYMAWNIPQEDSGIDIGDITARKALRKQLQCKTFRWYLVSVYPEM
230 240 250 260 270 280
100 110 120 130 140 150
pF1KE6 RVYNNTLTYGEVRNSKASAYCLDQGAEDGDRAILYPCHGMSSQLVRYSADGLLQLGPLGS
:.:.. ..:: ..:: . ::::: . . :.: ::::. : : :... ...: :.
XP_011 RMYSDIIAYGVLQNSLKTDLCLDQGPDTENVPIMYICHGMTPQNVYYTSSQQIHVGILSP
290 300 310 320 330 340
160 170 180 190 200
pF1KE6 TAFLPDSKCLVDDGTGRMPTLKKCEDVARPTQRL-WDFTQSGPIVSRATGRCLEVEMSKD
:. :..:::: .. : : .: . ..: :.:.:.::: .: . ::::.. ..:
XP_011 TVDDDDNRCLVD--VNSRPRLIECSYAKAKRMKLHWQFSQGGPIQNRKSKRCLELQENSD
350 360 370 380 390 400
210 220 230
pF1KE6 ANFGLRLVVQRCSGQKWMIRNWIKHARH
.::..::.:.::::.: : : ..
XP_011 LEFGFQLVLQKCSGQHWSITNVLRSLAS
410 420 430
>>NP_940918 (OMIM: 615136) polypeptide N-acetylgalactosa (607 aa)
initn: 803 init1: 653 opt: 844 Z-score: 1041.3 bits: 201.4 E(85289): 2.9e-51
Smith-Waterman score: 844; 48.7% identity (78.6% similar) in 234 aa overlap (1-233:372-603)
10 20 30
pF1KE6 MEVLPCSRVAHIERTRKPYNNDIDYYAKRN
.:::::::.:::::..:::..:. ...::
NP_940 QEIGLLDEGMEVYGGENVELGIRVWQCGGSVEVLPCSRIAHIERAHKPYTEDLTAHVRRN
350 360 370 380 390 400
40 50 60 70 80 90
pF1KE6 ALRAAEVWMDDFKSHVYMAWNIPMSNPGVDFGDVSERLALRQRLKCRSFKWYLENVYPEM
:::.::::::.::::::::::::. . :.:.::.. : :::..:.:..:.::: .:::::
NP_940 ALRVAEVWMDEFKSHVYMAWNIPQEDSGIDIGDITARKALRKQLQCKTFRWYLVSVYPEM
410 420 430 440 450 460
100 110 120 130 140 150
pF1KE6 RVYNNTLTYGEVRNSKASAYCLDQGAEDGDRAILYPCHGMSSQLVRYSADGLLQLGPLGS
:.:.. ..:: ..:: . ::::: . . :.: ::::. : : :... ...: :.
NP_940 RMYSDIIAYGVLQNSLKTDLCLDQGPDTENVPIMYICHGMTPQNVYYTSSQQIHVGILSP
470 480 490 500 510 520
160 170 180 190 200
pF1KE6 TAFLPDSKCLVDDGTGRMPTLKKCEDVARPTQRL-WDFTQSGPIVSRATGRCLEVEMSKD
:. :..:::: .. : : .: . ..: :.:.:.::: .: . ::::.. ..:
NP_940 TVDDDDNRCLVD--VNSRPRLIECSYAKAKRMKLHWQFSQGGPIQNRKSKRCLELQENSD
530 540 550 560 570
210 220 230
pF1KE6 ANFGLRLVVQRCSGQKWMIRNWIKHARH
.::..::.:.::::.: : : ..
NP_940 LEFGFQLVLQKCSGQHWSITNVLRSLAS
580 590 600
>>NP_059113 (OMIM: 606250) probable polypeptide N-acetyl (637 aa)
initn: 725 init1: 612 opt: 757 Z-score: 933.9 bits: 181.6 E(85289): 2.8e-45
Smith-Waterman score: 757; 47.0% identity (69.2% similar) in 234 aa overlap (1-233:399-629)
10 20 30
pF1KE6 MEVLPCSRVAHIERTRKPYNNDIDYYAKRN
.:.:::::.::.:: .::: :. :::
NP_059 GEIGSLDGGMLIYGGENVELSLRVWQCGGKVEILPCSRIAHLERHHKPYALDLTAALKRN
370 380 390 400 410 420
40 50 60 70 80 90
pF1KE6 ALRAAEVWMDDFKSHVYMAWNIPMSNPGVDFGDVSERLALRQRLKCRSFKWYLENVYPEM
:::.::.:::. : ::.:::::..: :.:::::: :.:::..:::..: :::.:::: .
NP_059 ALRVAEIWMDEHKHMVYLAWNIPLQNSGIDFGDVSSRMALREKLKCKTFDWYLKNVYPLL
430 440 450 460 470 480
100 110 120 130 140 150
pF1KE6 RVYNNTLTYGEVRNSKASAYCLDQGAEDGDRAILYPCHGMSSQLVRYSADGLLQLGPLGS
. .. . ::...: ::::: :. :.: :: .::: : : : : .: : .
NP_059 KPLHTIVGYGRMKNLLDENVCLDQGPVPGNTPIMYYCHEFSSQNVYYHLTGELYVGQLIA
490 500 510 520 530 540
160 170 180 190 200
pF1KE6 TAFLPDSKCLVDDGTGRMPTLKKCEDVARPTQRL-WDFTQSGPIVSRATGRCLEVEMSKD
: : .::.: : .. :::. : .:. .. ::: .: ...: : :::: :.::
NP_059 EASASD-RCLTDPGKAEKPTLEPCSKAAKNRLHIYWDFKPGGAVINRDTKRCLE--MKKD
550 560 570 580 590 600
210 220 230
pF1KE6 ANFGLRLVVQRCSGQKWMIRNWIKHARH
. ::.: :: : : :.. ..
NP_059 LLGSHVLVLQTCSTQVWEIQHTVRDWGQTNSQ
610 620 630
237 residues in 1 query sequences
60827320 residues in 85289 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Tue Nov 8 15:00:19 2016 done: Tue Nov 8 15:00:20 2016
Total Scan time: 4.740 Total Display time: 0.000
Function used was FASTA [36.3.4 Apr, 2011]