Result of FASTA (omim) for
pFN21AE6631
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KE6631, 316 aa
1>>>pF1KE6631 316 - 316 aa - 316 aa
Library: /omim/omim.rfq.tfa
60827320 residues in 85289 sequences
Statistics: Expectation_n fit: rho(ln(x))= 8.1133+/-0.000668; mu= 1.6909+/- 0.041
mean_var=372.9904+/-78.436, 0's: 0 Z-trim(111.4): 314 B-trim: 33 in 1/58
Lambda= 0.066409
statistics sampled from 19606 (19930) to 19606 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.602), E-opt: 0.2 (0.234), width: 16
Scan time: 4.980
The best scores are: opt bits E(85289)
NP_001137531 (OMIM: 607938) neurotrimin isoform 4 ( 316) 2111 217.2 3.6e-56
NP_057606 (OMIM: 607938) neurotrimin isoform 1 pre ( 344) 2090 215.2 1.5e-55
XP_011541163 (OMIM: 607938) PREDICTED: neurotrimin ( 326) 2082 214.4 2.5e-55
NP_001137530 (OMIM: 607938) neurotrimin isoform 3 ( 355) 2082 214.5 2.7e-55
XP_005271638 (OMIM: 607938) PREDICTED: neurotrimin ( 367) 2082 214.5 2.7e-55
XP_016873343 (OMIM: 607938) PREDICTED: neurotrimin ( 373) 2082 214.5 2.7e-55
XP_016873340 (OMIM: 607938) PREDICTED: neurotrimin ( 385) 2082 214.5 2.8e-55
XP_016873353 (OMIM: 607938) PREDICTED: neurotrimin ( 325) 1911 198.0 2.2e-50
XP_016873351 (OMIM: 607938) PREDICTED: neurotrimin ( 335) 1904 197.4 3.5e-50
XP_016873350 (OMIM: 607938) PREDICTED: neurotrimin ( 335) 1904 197.4 3.5e-50
NP_001041674 (OMIM: 607938) neurotrimin isoform 2 ( 344) 1900 197.0 4.6e-50
XP_006718918 (OMIM: 607938) PREDICTED: neurotrimin ( 346) 1896 196.6 6.1e-50
XP_016873348 (OMIM: 607938) PREDICTED: neurotrimin ( 346) 1896 196.6 6.1e-50
XP_016873347 (OMIM: 607938) PREDICTED: neurotrimin ( 346) 1896 196.6 6.1e-50
XP_016873345 (OMIM: 607938) PREDICTED: neurotrimin ( 358) 1896 196.6 6.2e-50
XP_016873346 (OMIM: 607938) PREDICTED: neurotrimin ( 358) 1896 196.6 6.2e-50
XP_016873342 (OMIM: 607938) PREDICTED: neurotrimin ( 376) 1896 196.7 6.3e-50
XP_016873354 (OMIM: 607938) PREDICTED: neurotrimin ( 326) 1892 196.2 7.7e-50
XP_005271639 (OMIM: 607938) PREDICTED: neurotrimin ( 355) 1892 196.2 8e-50
XP_005271637 (OMIM: 607938) PREDICTED: neurotrimin ( 367) 1892 196.3 8.2e-50
XP_016873344 (OMIM: 607938) PREDICTED: neurotrimin ( 373) 1892 196.3 8.2e-50
XP_016873341 (OMIM: 607938) PREDICTED: neurotrimin ( 385) 1892 196.3 8.4e-50
XP_006718920 (OMIM: 607938) PREDICTED: neurotrimin ( 303) 1804 187.7 2.5e-47
XP_016873355 (OMIM: 607938) PREDICTED: neurotrimin ( 285) 1796 186.9 4.2e-47
XP_016873352 (OMIM: 607938) PREDICTED: neurotrimin ( 332) 1796 187.0 4.5e-47
XP_016873349 (OMIM: 607938) PREDICTED: neurotrimin ( 344) 1796 187.0 4.6e-47
NP_001306035 (OMIM: 167000,600632) opioid-binding ( 344) 1723 180.0 5.9e-45
NP_002536 (OMIM: 167000,600632) opioid-binding pro ( 345) 1711 178.9 1.3e-44
NP_001306032 (OMIM: 167000,600632) opioid-binding ( 354) 1703 178.1 2.3e-44
XP_006718909 (OMIM: 167000,600632) PREDICTED: opio ( 337) 1545 163.0 7.9e-40
NP_001012393 (OMIM: 167000,600632) opioid-binding ( 338) 1533 161.8 1.8e-39
NP_001306034 (OMIM: 167000,600632) opioid-binding ( 304) 1425 151.4 2.2e-36
XP_011541158 (OMIM: 167000,600632) PREDICTED: opio ( 304) 1425 151.4 2.2e-36
NP_002329 (OMIM: 603241) limbic system-associated ( 338) 1189 128.9 1.5e-29
XP_011511142 (OMIM: 603241) PREDICTED: limbic syst ( 344) 1189 128.9 1.5e-29
XP_016861872 (OMIM: 603241) PREDICTED: limbic syst ( 350) 1189 128.9 1.5e-29
NP_001305844 (OMIM: 603241) limbic system-associat ( 361) 1189 128.9 1.5e-29
NP_001306033 (OMIM: 167000,600632) opioid-binding ( 245) 1076 117.8 2.2e-26
XP_011539502 (OMIM: 613173) PREDICTED: neuronal gr ( 320) 1068 117.2 4.4e-26
NP_776169 (OMIM: 613173) neuronal growth regulator ( 354) 1068 117.3 4.7e-26
XP_011539503 (OMIM: 613173) PREDICTED: neuronal gr ( 234) 798 91.2 2.3e-18
XP_016856450 (OMIM: 613173) PREDICTED: neuronal gr ( 222) 790 90.4 3.8e-18
XP_016861873 (OMIM: 603241) PREDICTED: limbic syst ( 197) 494 61.9 1.2e-09
NP_001264214 (OMIM: 613773) protein turtle homolog (1437) 362 50.6 2.3e-05
XP_011540997 (OMIM: 613773) PREDICTED: protein tur (1441) 362 50.6 2.3e-05
XP_016872884 (OMIM: 613773) PREDICTED: protein tur (1444) 362 50.6 2.3e-05
XP_016872883 (OMIM: 613773) PREDICTED: protein tur (1451) 362 50.6 2.3e-05
XP_011540996 (OMIM: 613773) PREDICTED: protein tur (1475) 362 50.6 2.3e-05
XP_016872882 (OMIM: 613773) PREDICTED: protein tur (1508) 362 50.6 2.3e-05
XP_011540994 (OMIM: 613773) PREDICTED: protein tur (1535) 362 50.6 2.4e-05
>>NP_001137531 (OMIM: 607938) neurotrimin isoform 4 prec (316 aa)
initn: 2111 init1: 2111 opt: 2111 Z-score: 1129.3 bits: 217.2 E(85289): 3.6e-56
Smith-Waterman score: 2111; 100.0% identity (100.0% similar) in 316 aa overlap (1-316:1-316)
10 20 30 40 50 60
pF1KE6 MGVCGYLFLPWKCLVVVSLRLLFLVPTGVPVRSGDATFPKAMDNVTVRQGESATLRCTID
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MGVCGYLFLPWKCLVVVSLRLLFLVPTGVPVRSGDATFPKAMDNVTVRQGESATLRCTID
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE6 NRVTRVAWLNRSTILYAGNDKWCLDPRVVLLSNTQTQYSIEIQNVDVYDEGPYTCSVQTD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 NRVTRVAWLNRSTILYAGNDKWCLDPRVVLLSNTQTQYSIEIQNVDVYDEGPYTCSVQTD
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE6 NHPKTSRVHLIVQVSPKIVEISSDISINEGNNISLTCIATGRPEPTVTWRHISPKAVGFV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 NHPKTSRVHLIVQVSPKIVEISSDISINEGNNISLTCIATGRPEPTVTWRHISPKAVGFV
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE6 SEDEYLEIQGITREQSGDYECSASNDVAAPVVRRVKVTVNYPPYISEAKGTGVPVGQKGT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 SEDEYLEIQGITREQSGDYECSASNDVAAPVVRRVKVTVNYPPYISEAKGTGVPVGQKGT
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE6 LQCEASAVPSAEFQWYKDDKRLIEGKKGVKVENRPFLSKLIFFNVSEHDYGNYTCVASNK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 LQCEASAVPSAEFQWYKDDKRLIEGKKGVKVENRPFLSKLIFFNVSEHDYGNYTCVASNK
250 260 270 280 290 300
310
pF1KE6 LGHTNASIMLFGETVL
::::::::::::::::
NP_001 LGHTNASIMLFGETVL
310
>>NP_057606 (OMIM: 607938) neurotrimin isoform 1 precurs (344 aa)
initn: 2090 init1: 2090 opt: 2090 Z-score: 1118.1 bits: 215.2 E(85289): 1.5e-55
Smith-Waterman score: 2090; 100.0% identity (100.0% similar) in 312 aa overlap (1-312:1-312)
10 20 30 40 50 60
pF1KE6 MGVCGYLFLPWKCLVVVSLRLLFLVPTGVPVRSGDATFPKAMDNVTVRQGESATLRCTID
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_057 MGVCGYLFLPWKCLVVVSLRLLFLVPTGVPVRSGDATFPKAMDNVTVRQGESATLRCTID
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE6 NRVTRVAWLNRSTILYAGNDKWCLDPRVVLLSNTQTQYSIEIQNVDVYDEGPYTCSVQTD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_057 NRVTRVAWLNRSTILYAGNDKWCLDPRVVLLSNTQTQYSIEIQNVDVYDEGPYTCSVQTD
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE6 NHPKTSRVHLIVQVSPKIVEISSDISINEGNNISLTCIATGRPEPTVTWRHISPKAVGFV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_057 NHPKTSRVHLIVQVSPKIVEISSDISINEGNNISLTCIATGRPEPTVTWRHISPKAVGFV
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE6 SEDEYLEIQGITREQSGDYECSASNDVAAPVVRRVKVTVNYPPYISEAKGTGVPVGQKGT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_057 SEDEYLEIQGITREQSGDYECSASNDVAAPVVRRVKVTVNYPPYISEAKGTGVPVGQKGT
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE6 LQCEASAVPSAEFQWYKDDKRLIEGKKGVKVENRPFLSKLIFFNVSEHDYGNYTCVASNK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_057 LQCEASAVPSAEFQWYKDDKRLIEGKKGVKVENRPFLSKLIFFNVSEHDYGNYTCVASNK
250 260 270 280 290 300
310
pF1KE6 LGHTNASIMLFGETVL
::::::::::::
NP_057 LGHTNASIMLFGPGAVSEVSNGTSRRAGCVWLLPLLVLHLLLKF
310 320 330 340
>>XP_011541163 (OMIM: 607938) PREDICTED: neurotrimin iso (326 aa)
initn: 2082 init1: 2082 opt: 2082 Z-score: 1114.2 bits: 214.4 E(85289): 2.5e-55
Smith-Waterman score: 2082; 100.0% identity (100.0% similar) in 311 aa overlap (1-311:1-311)
10 20 30 40 50 60
pF1KE6 MGVCGYLFLPWKCLVVVSLRLLFLVPTGVPVRSGDATFPKAMDNVTVRQGESATLRCTID
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 MGVCGYLFLPWKCLVVVSLRLLFLVPTGVPVRSGDATFPKAMDNVTVRQGESATLRCTID
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE6 NRVTRVAWLNRSTILYAGNDKWCLDPRVVLLSNTQTQYSIEIQNVDVYDEGPYTCSVQTD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 NRVTRVAWLNRSTILYAGNDKWCLDPRVVLLSNTQTQYSIEIQNVDVYDEGPYTCSVQTD
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE6 NHPKTSRVHLIVQVSPKIVEISSDISINEGNNISLTCIATGRPEPTVTWRHISPKAVGFV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 NHPKTSRVHLIVQVSPKIVEISSDISINEGNNISLTCIATGRPEPTVTWRHISPKAVGFV
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE6 SEDEYLEIQGITREQSGDYECSASNDVAAPVVRRVKVTVNYPPYISEAKGTGVPVGQKGT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 SEDEYLEIQGITREQSGDYECSASNDVAAPVVRRVKVTVNYPPYISEAKGTGVPVGQKGT
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE6 LQCEASAVPSAEFQWYKDDKRLIEGKKGVKVENRPFLSKLIFFNVSEHDYGNYTCVASNK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 LQCEASAVPSAEFQWYKDDKRLIEGKKGVKVENRPFLSKLIFFNVSEHDYGNYTCVASNK
250 260 270 280 290 300
310
pF1KE6 LGHTNASIMLFGETVL
:::::::::::
XP_011 LGHTNASIMLFELNEPTSSTLLQDVK
310 320
>>NP_001137530 (OMIM: 607938) neurotrimin isoform 3 prec (355 aa)
initn: 2082 init1: 2082 opt: 2082 Z-score: 1113.8 bits: 214.5 E(85289): 2.7e-55
Smith-Waterman score: 2082; 100.0% identity (100.0% similar) in 311 aa overlap (1-311:1-311)
10 20 30 40 50 60
pF1KE6 MGVCGYLFLPWKCLVVVSLRLLFLVPTGVPVRSGDATFPKAMDNVTVRQGESATLRCTID
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MGVCGYLFLPWKCLVVVSLRLLFLVPTGVPVRSGDATFPKAMDNVTVRQGESATLRCTID
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE6 NRVTRVAWLNRSTILYAGNDKWCLDPRVVLLSNTQTQYSIEIQNVDVYDEGPYTCSVQTD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 NRVTRVAWLNRSTILYAGNDKWCLDPRVVLLSNTQTQYSIEIQNVDVYDEGPYTCSVQTD
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE6 NHPKTSRVHLIVQVSPKIVEISSDISINEGNNISLTCIATGRPEPTVTWRHISPKAVGFV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 NHPKTSRVHLIVQVSPKIVEISSDISINEGNNISLTCIATGRPEPTVTWRHISPKAVGFV
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE6 SEDEYLEIQGITREQSGDYECSASNDVAAPVVRRVKVTVNYPPYISEAKGTGVPVGQKGT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 SEDEYLEIQGITREQSGDYECSASNDVAAPVVRRVKVTVNYPPYISEAKGTGVPVGQKGT
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE6 LQCEASAVPSAEFQWYKDDKRLIEGKKGVKVENRPFLSKLIFFNVSEHDYGNYTCVASNK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 LQCEASAVPSAEFQWYKDDKRLIEGKKGVKVENRPFLSKLIFFNVSEHDYGNYTCVASNK
250 260 270 280 290 300
310
pF1KE6 LGHTNASIMLFGETVL
:::::::::::
NP_001 LGHTNASIMLFEVKTTALTPWKGPGAVSEVSNGTSRRAGCVWLLPLLVLHLLLKF
310 320 330 340 350
>>XP_005271638 (OMIM: 607938) PREDICTED: neurotrimin iso (367 aa)
initn: 2082 init1: 2082 opt: 2082 Z-score: 1113.7 bits: 214.5 E(85289): 2.7e-55
Smith-Waterman score: 2082; 100.0% identity (100.0% similar) in 311 aa overlap (1-311:1-311)
10 20 30 40 50 60
pF1KE6 MGVCGYLFLPWKCLVVVSLRLLFLVPTGVPVRSGDATFPKAMDNVTVRQGESATLRCTID
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 MGVCGYLFLPWKCLVVVSLRLLFLVPTGVPVRSGDATFPKAMDNVTVRQGESATLRCTID
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE6 NRVTRVAWLNRSTILYAGNDKWCLDPRVVLLSNTQTQYSIEIQNVDVYDEGPYTCSVQTD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 NRVTRVAWLNRSTILYAGNDKWCLDPRVVLLSNTQTQYSIEIQNVDVYDEGPYTCSVQTD
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE6 NHPKTSRVHLIVQVSPKIVEISSDISINEGNNISLTCIATGRPEPTVTWRHISPKAVGFV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 NHPKTSRVHLIVQVSPKIVEISSDISINEGNNISLTCIATGRPEPTVTWRHISPKAVGFV
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE6 SEDEYLEIQGITREQSGDYECSASNDVAAPVVRRVKVTVNYPPYISEAKGTGVPVGQKGT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 SEDEYLEIQGITREQSGDYECSASNDVAAPVVRRVKVTVNYPPYISEAKGTGVPVGQKGT
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE6 LQCEASAVPSAEFQWYKDDKRLIEGKKGVKVENRPFLSKLIFFNVSEHDYGNYTCVASNK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 LQCEASAVPSAEFQWYKDDKRLIEGKKGVKVENRPFLSKLIFFNVSEHDYGNYTCVASNK
250 260 270 280 290 300
310
pF1KE6 LGHTNASIMLFGETVL
:::::::::::
XP_005 LGHTNASIMLFELNEPTSSTLLQEVKTTALTPWKGPGAVSEVSNGTSRRAGCVWLLPLLV
310 320 330 340 350 360
>>XP_016873343 (OMIM: 607938) PREDICTED: neurotrimin iso (373 aa)
initn: 2082 init1: 2082 opt: 2082 Z-score: 1113.6 bits: 214.5 E(85289): 2.7e-55
Smith-Waterman score: 2082; 100.0% identity (100.0% similar) in 311 aa overlap (1-311:1-311)
10 20 30 40 50 60
pF1KE6 MGVCGYLFLPWKCLVVVSLRLLFLVPTGVPVRSGDATFPKAMDNVTVRQGESATLRCTID
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 MGVCGYLFLPWKCLVVVSLRLLFLVPTGVPVRSGDATFPKAMDNVTVRQGESATLRCTID
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE6 NRVTRVAWLNRSTILYAGNDKWCLDPRVVLLSNTQTQYSIEIQNVDVYDEGPYTCSVQTD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 NRVTRVAWLNRSTILYAGNDKWCLDPRVVLLSNTQTQYSIEIQNVDVYDEGPYTCSVQTD
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE6 NHPKTSRVHLIVQVSPKIVEISSDISINEGNNISLTCIATGRPEPTVTWRHISPKAVGFV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 NHPKTSRVHLIVQVSPKIVEISSDISINEGNNISLTCIATGRPEPTVTWRHISPKAVGFV
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE6 SEDEYLEIQGITREQSGDYECSASNDVAAPVVRRVKVTVNYPPYISEAKGTGVPVGQKGT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 SEDEYLEIQGITREQSGDYECSASNDVAAPVVRRVKVTVNYPPYISEAKGTGVPVGQKGT
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE6 LQCEASAVPSAEFQWYKDDKRLIEGKKGVKVENRPFLSKLIFFNVSEHDYGNYTCVASNK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 LQCEASAVPSAEFQWYKDDKRLIEGKKGVKVENRPFLSKLIFFNVSEHDYGNYTCVASNK
250 260 270 280 290 300
310
pF1KE6 LGHTNASIMLFGETVL
:::::::::::
XP_016 LGHTNASIMLFEVKTTALTPWKGLYIFQTAAALVGVGYVKLFTFLPDAFFPELTPGSSAE
310 320 330 340 350 360
>>XP_016873340 (OMIM: 607938) PREDICTED: neurotrimin iso (385 aa)
initn: 2082 init1: 2082 opt: 2082 Z-score: 1113.5 bits: 214.5 E(85289): 2.8e-55
Smith-Waterman score: 2082; 100.0% identity (100.0% similar) in 311 aa overlap (1-311:1-311)
10 20 30 40 50 60
pF1KE6 MGVCGYLFLPWKCLVVVSLRLLFLVPTGVPVRSGDATFPKAMDNVTVRQGESATLRCTID
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 MGVCGYLFLPWKCLVVVSLRLLFLVPTGVPVRSGDATFPKAMDNVTVRQGESATLRCTID
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE6 NRVTRVAWLNRSTILYAGNDKWCLDPRVVLLSNTQTQYSIEIQNVDVYDEGPYTCSVQTD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 NRVTRVAWLNRSTILYAGNDKWCLDPRVVLLSNTQTQYSIEIQNVDVYDEGPYTCSVQTD
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE6 NHPKTSRVHLIVQVSPKIVEISSDISINEGNNISLTCIATGRPEPTVTWRHISPKAVGFV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 NHPKTSRVHLIVQVSPKIVEISSDISINEGNNISLTCIATGRPEPTVTWRHISPKAVGFV
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE6 SEDEYLEIQGITREQSGDYECSASNDVAAPVVRRVKVTVNYPPYISEAKGTGVPVGQKGT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 SEDEYLEIQGITREQSGDYECSASNDVAAPVVRRVKVTVNYPPYISEAKGTGVPVGQKGT
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE6 LQCEASAVPSAEFQWYKDDKRLIEGKKGVKVENRPFLSKLIFFNVSEHDYGNYTCVASNK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 LQCEASAVPSAEFQWYKDDKRLIEGKKGVKVENRPFLSKLIFFNVSEHDYGNYTCVASNK
250 260 270 280 290 300
310
pF1KE6 LGHTNASIMLFGETVL
:::::::::::
XP_016 LGHTNASIMLFELNEPTSSTLLQEVKTTALTPWKGLYIFQTAAALVGVGYVKLFTFLPDA
310 320 330 340 350 360
>>XP_016873353 (OMIM: 607938) PREDICTED: neurotrimin iso (325 aa)
initn: 1911 init1: 1911 opt: 1911 Z-score: 1025.7 bits: 198.0 E(85289): 2.2e-50
Smith-Waterman score: 1911; 99.7% identity (100.0% similar) in 287 aa overlap (26-312:7-293)
10 20 30 40 50 60
pF1KE6 MGVCGYLFLPWKCLVVVSLRLLFLVPTGVPVRSGDATFPKAMDNVTVRQGESATLRCTID
:.:::::::::::::::::::::::::::::::::
XP_016 MKPTPSPSGVPVRSGDATFPKAMDNVTVRQGESATLRCTID
10 20 30 40
70 80 90 100 110 120
pF1KE6 NRVTRVAWLNRSTILYAGNDKWCLDPRVVLLSNTQTQYSIEIQNVDVYDEGPYTCSVQTD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 NRVTRVAWLNRSTILYAGNDKWCLDPRVVLLSNTQTQYSIEIQNVDVYDEGPYTCSVQTD
50 60 70 80 90 100
130 140 150 160 170 180
pF1KE6 NHPKTSRVHLIVQVSPKIVEISSDISINEGNNISLTCIATGRPEPTVTWRHISPKAVGFV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 NHPKTSRVHLIVQVSPKIVEISSDISINEGNNISLTCIATGRPEPTVTWRHISPKAVGFV
110 120 130 140 150 160
190 200 210 220 230 240
pF1KE6 SEDEYLEIQGITREQSGDYECSASNDVAAPVVRRVKVTVNYPPYISEAKGTGVPVGQKGT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 SEDEYLEIQGITREQSGDYECSASNDVAAPVVRRVKVTVNYPPYISEAKGTGVPVGQKGT
170 180 190 200 210 220
250 260 270 280 290 300
pF1KE6 LQCEASAVPSAEFQWYKDDKRLIEGKKGVKVENRPFLSKLIFFNVSEHDYGNYTCVASNK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 LQCEASAVPSAEFQWYKDDKRLIEGKKGVKVENRPFLSKLIFFNVSEHDYGNYTCVASNK
230 240 250 260 270 280
310
pF1KE6 LGHTNASIMLFGETVL
::::::::::::
XP_016 LGHTNASIMLFGPGAVSEVSNGTSRRAGCVWLLPLLVLHLLLKF
290 300 310 320
>>XP_016873351 (OMIM: 607938) PREDICTED: neurotrimin iso (335 aa)
initn: 1904 init1: 1904 opt: 1904 Z-score: 1021.9 bits: 197.4 E(85289): 3.5e-50
Smith-Waterman score: 1904; 100.0% identity (100.0% similar) in 286 aa overlap (27-312:18-303)
10 20 30 40 50 60
pF1KE6 MGVCGYLFLPWKCLVVVSLRLLFLVPTGVPVRSGDATFPKAMDNVTVRQGESATLRCTID
::::::::::::::::::::::::::::::::::
XP_016 MNGKRNGEGGKRWKWKGTGVPVRSGDATFPKAMDNVTVRQGESATLRCTID
10 20 30 40 50
70 80 90 100 110 120
pF1KE6 NRVTRVAWLNRSTILYAGNDKWCLDPRVVLLSNTQTQYSIEIQNVDVYDEGPYTCSVQTD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 NRVTRVAWLNRSTILYAGNDKWCLDPRVVLLSNTQTQYSIEIQNVDVYDEGPYTCSVQTD
60 70 80 90 100 110
130 140 150 160 170 180
pF1KE6 NHPKTSRVHLIVQVSPKIVEISSDISINEGNNISLTCIATGRPEPTVTWRHISPKAVGFV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 NHPKTSRVHLIVQVSPKIVEISSDISINEGNNISLTCIATGRPEPTVTWRHISPKAVGFV
120 130 140 150 160 170
190 200 210 220 230 240
pF1KE6 SEDEYLEIQGITREQSGDYECSASNDVAAPVVRRVKVTVNYPPYISEAKGTGVPVGQKGT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 SEDEYLEIQGITREQSGDYECSASNDVAAPVVRRVKVTVNYPPYISEAKGTGVPVGQKGT
180 190 200 210 220 230
250 260 270 280 290 300
pF1KE6 LQCEASAVPSAEFQWYKDDKRLIEGKKGVKVENRPFLSKLIFFNVSEHDYGNYTCVASNK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 LQCEASAVPSAEFQWYKDDKRLIEGKKGVKVENRPFLSKLIFFNVSEHDYGNYTCVASNK
240 250 260 270 280 290
310
pF1KE6 LGHTNASIMLFGETVL
::::::::::::
XP_016 LGHTNASIMLFGPGAVSEVSNGTSRRAGCVWLLPLLVLHLLLKF
300 310 320 330
>>XP_016873350 (OMIM: 607938) PREDICTED: neurotrimin iso (335 aa)
initn: 1904 init1: 1904 opt: 1904 Z-score: 1021.9 bits: 197.4 E(85289): 3.5e-50
Smith-Waterman score: 1904; 100.0% identity (100.0% similar) in 286 aa overlap (27-312:18-303)
10 20 30 40 50 60
pF1KE6 MGVCGYLFLPWKCLVVVSLRLLFLVPTGVPVRSGDATFPKAMDNVTVRQGESATLRCTID
::::::::::::::::::::::::::::::::::
XP_016 MNGKRNGEGGKRWKWKGTGVPVRSGDATFPKAMDNVTVRQGESATLRCTID
10 20 30 40 50
70 80 90 100 110 120
pF1KE6 NRVTRVAWLNRSTILYAGNDKWCLDPRVVLLSNTQTQYSIEIQNVDVYDEGPYTCSVQTD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 NRVTRVAWLNRSTILYAGNDKWCLDPRVVLLSNTQTQYSIEIQNVDVYDEGPYTCSVQTD
60 70 80 90 100 110
130 140 150 160 170 180
pF1KE6 NHPKTSRVHLIVQVSPKIVEISSDISINEGNNISLTCIATGRPEPTVTWRHISPKAVGFV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 NHPKTSRVHLIVQVSPKIVEISSDISINEGNNISLTCIATGRPEPTVTWRHISPKAVGFV
120 130 140 150 160 170
190 200 210 220 230 240
pF1KE6 SEDEYLEIQGITREQSGDYECSASNDVAAPVVRRVKVTVNYPPYISEAKGTGVPVGQKGT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 SEDEYLEIQGITREQSGDYECSASNDVAAPVVRRVKVTVNYPPYISEAKGTGVPVGQKGT
180 190 200 210 220 230
250 260 270 280 290 300
pF1KE6 LQCEASAVPSAEFQWYKDDKRLIEGKKGVKVENRPFLSKLIFFNVSEHDYGNYTCVASNK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 LQCEASAVPSAEFQWYKDDKRLIEGKKGVKVENRPFLSKLIFFNVSEHDYGNYTCVASNK
240 250 260 270 280 290
310
pF1KE6 LGHTNASIMLFGETVL
::::::::::::
XP_016 LGHTNASIMLFGPGAVSEVSNGTSRRAGCVWLLPLLVLHLLLKF
300 310 320 330
316 residues in 1 query sequences
60827320 residues in 85289 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Tue Nov 8 14:56:37 2016 done: Tue Nov 8 14:56:38 2016
Total Scan time: 4.980 Total Display time: 0.000
Function used was FASTA [36.3.4 Apr, 2011]