FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448

Query: pF1KE6596, 64 aa
  1>>>pF1KE6596 64 - 64 aa - 64 aa
Library: human.CCDS.faa
  18511270 residues in 32554 sequences

Statistics:  Expectation_n fit: rho(ln(x))= 4.4304+/-0.000513; mu= 9.9673+/- 0.031
 mean_var=41.9588+/- 8.350, 0's: 0 Z-trim(111.8): 6  B-trim: 0 in 0/52
 Lambda= 0.197999
 statistics sampled from 12644 (12650) to 12644 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
 ktup: 2, E-join: 1 (0.8), E-opt: 0.2 (0.389), width:  16
 Scan time:  1.010

The best scores are:                                      opt bits E(32554)
CCDS82964.1 SLC10A7 gene_id:84068|Hs108|chr4       (  64)  402 120.9 5.3e-29
CCDS3768.1 SLC10A7 gene_id:84068|Hs108|chr4        ( 159)  394 118.8 5.7e-28
CCDS82963.1 SLC10A7 gene_id:84068|Hs108|chr4       ( 327)  394 118.9 1.1e-27
CCDS82962.1 SLC10A7 gene_id:84068|Hs108|chr4       (  85)  388 117.0 1.1e-27
CCDS34073.1 SLC10A7 gene_id:84068|Hs108|chr4       ( 340)  394 118.9 1.1e-27
CCDS75198.1 SLC10A7 gene_id:84068|Hs108|chr4       ( 358)  394 118.9 1.2e-27


>>CCDS82964.1 SLC10A7 gene_id:84068|Hs108|chr4            (64 aa)
 initn: 402 init1: 402 opt: 402  Z-score: 634.1  bits: 120.9 E(32554): 5.3e-29
Smith-Waterman score: 402; 100.0% identity (100.0% similar) in 64 aa overlap (1-64:1-64)

               10        20        30        40        50        60
pF1KE6 MRLLERMRKDWFMVGIVLAIAGAKLEPSIGVNGGPLKPEITVSYIAVATIFFNSGLSLKT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS82 MRLLERMRKDWFMVGIVLAIAGAKLEPSIGVNGGPLKPEITVSYIAVATIFFNSGLSLKT
               10        20        30        40        50        60

           
pF1KE6 ELLT
       ::::
CCDS82 ELLT
           

>>CCDS3768.1 SLC10A7 gene_id:84068|Hs108|chr4             (159 aa)
 initn: 394 init1: 394 opt: 394  Z-score: 615.6  bits: 118.8 E(32554): 5.7e-28
Smith-Waterman score: 394; 98.4% identity (98.4% similar) in 64 aa overlap (1-64:1-64)

               10        20        30        40        50        60
pF1KE6 MRLLERMRKDWFMVGIVLAIAGAKLEPSIGVNGGPLKPEITVSYIAVATIFFNSGLSLKT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS37 MRLLERMRKDWFMVGIVLAIAGAKLEPSIGVNGGPLKPEITVSYIAVATIFFNSGLSLKT
               10        20        30        40        50        60

                                                                   
pF1KE6 ELLT                                                        
       : ::                                                        
CCDS37 EELTSALVHLKLHLFIQIFTLAFFPATIWLFLQLLSITPINEWLLKGLQTVGCMPPPVSS
               70        80        90       100       110       120

>>CCDS82963.1 SLC10A7 gene_id:84068|Hs108|chr4            (327 aa)
 initn: 394 init1: 394 opt: 394  Z-score: 610.6  bits: 118.9 E(32554): 1.1e-27
Smith-Waterman score: 394; 98.4% identity (98.4% similar) in 64 aa overlap (1-64:1-64)

               10        20        30        40        50        60
pF1KE6 MRLLERMRKDWFMVGIVLAIAGAKLEPSIGVNGGPLKPEITVSYIAVATIFFNSGLSLKT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS82 MRLLERMRKDWFMVGIVLAIAGAKLEPSIGVNGGPLKPEITVSYIAVATIFFNSGLSLKT
               10        20        30        40        50        60

                                                                   
pF1KE6 ELLT                                                        
       : ::                                                        
CCDS82 EELTSALVHLKLHLFIQIFTLAFFPATIWLFLQLLSITPINEWLLKGLQTVGCMPPPVSS
               70        80        90       100       110       120

>>CCDS82962.1 SLC10A7 gene_id:84068|Hs108|chr4            (85 aa)
 initn: 388 init1: 388 opt: 388  Z-score: 610.6  bits: 117.0 E(32554): 1.1e-27
Smith-Waterman score: 388; 98.4% identity (100.0% similar) in 62 aa overlap (1-62:1-62)

               10        20        30        40        50        60
pF1KE6 MRLLERMRKDWFMVGIVLAIAGAKLEPSIGVNGGPLKPEITVSYIAVATIFFNSGLSLKT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS82 MRLLERMRKDWFMVGIVLAIAGAKLEPSIGVNGGPLKPEITVSYIAVATIFFNSGLSLKT
               10        20        30        40        50        60

                                
pF1KE6 ELLT                     
       :.                       
CCDS82 EFADSRLHASACVFCSDFNQGSWWK
               70        80     

>>CCDS34073.1 SLC10A7 gene_id:84068|Hs108|chr4            (340 aa)
 initn: 394 init1: 394 opt: 394  Z-score: 610.4  bits: 118.9 E(32554): 1.1e-27
Smith-Waterman score: 394; 98.4% identity (98.4% similar) in 64 aa overlap (1-64:1-64)

               10        20        30        40        50        60
pF1KE6 MRLLERMRKDWFMVGIVLAIAGAKLEPSIGVNGGPLKPEITVSYIAVATIFFNSGLSLKT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS34 MRLLERMRKDWFMVGIVLAIAGAKLEPSIGVNGGPLKPEITVSYIAVATIFFNSGLSLKT
               10        20        30        40        50        60

                                                                   
pF1KE6 ELLT                                                        
       : ::                                                        
CCDS34 EELTSALVHLKLHLFIQIFTLAFFPATIWLFLQLLSITPINEWLLKGLQTVGCMPPPVSS
               70        80        90       100       110       120

>>CCDS75198.1 SLC10A7 gene_id:84068|Hs108|chr4            (358 aa)
 initn: 394 init1: 394 opt: 394  Z-score: 610.0  bits: 118.9 E(32554): 1.2e-27
Smith-Waterman score: 394; 98.4% identity (98.4% similar) in 64 aa overlap (1-64:1-64)

               10        20        30        40        50        60
pF1KE6 MRLLERMRKDWFMVGIVLAIAGAKLEPSIGVNGGPLKPEITVSYIAVATIFFNSGLSLKT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS75 MRLLERMRKDWFMVGIVLAIAGAKLEPSIGVNGGPLKPEITVSYIAVATIFFNSGLSLKT
               10        20        30        40        50        60

                                                                   
pF1KE6 ELLT                                                        
       : ::                                                        
CCDS75 EELTSALVHLKLHLFIQIFTLAFFPATIWLFLQLLSITPINEWLLKGLQTVGCMPPPVSS
               70        80        90       100       110       120




64 residues in 1 query   sequences
18511270 residues in 32554 library sequences
 Tcomplib [36.3.4 Apr, 2011] (8 proc)
 start: Tue Nov  8 14:40:08 2016 done: Tue Nov  8 14:40:08 2016
 Total Scan time:  1.010 Total Display time: -0.020

Function used was FASTA [36.3.4 Apr, 2011]