Result of FASTA (ccds) for
pFN21AE6588
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KE6588, 177 aa
1>>>pF1KE6588 177 - 177 aa - 177 aa
Library: human.CCDS.faa
18511270 residues in 32554 sequences
Statistics: Expectation_n fit: rho(ln(x))= 5.9607+/-0.00106; mu= 12.8818+/- 0.065
mean_var=204.6159+/-37.687, 0's: 0 Z-trim(112.7): 117 B-trim: 0 in 0/50
Lambda= 0.089661
statistics sampled from 13314 (13436) to 13314 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.725), E-opt: 0.2 (0.413), width: 16
Scan time: 1.390
The best scores are: opt bits E(32554)
CCDS42324.1 1 gene_id:81851|Hs108|chr17 ( 177) 1472 201.8 1.8e-52
CCDS42323.1 3 gene_id:81850|Hs108|chr17 ( 167) 1191 165.4 1.5e-41
CCDS42321.1 5 gene_id:83895|Hs108|chr17 ( 174) 1132 157.8 3.1e-39
CCDS58548.1 4 gene_id:728255|Hs108|chr17 ( 121) 883 125.4 1.3e-29
CCDS54124.1 9 gene_id:100132386|Hs108|chr17 ( 210) 590 87.8 4.4e-18
CCDS56029.1 1 gene_id:728318|Hs108|chr17 ( 250) 571 85.5 2.7e-17
CCDS54125.1 6 gene_id:81871|Hs108|chr17 ( 205) 558 83.7 7.7e-17
CCDS45674.1 8 gene_id:728224|Hs108|chr17 ( 185) 528 79.7 1.1e-15
CCDS32649.1 12 gene_id:83755|Hs108|chr17 ( 201) 506 76.9 8.1e-15
CCDS32650.1 5 gene_id:85289|Hs108|chr17 ( 181) 479 73.4 8.6e-14
CCDS42955.1 2 gene_id:386679|Hs108|chr21 ( 255) 473 72.8 1.8e-13
CCDS42957.1 4 gene_id:386672|Hs108|chr21 ( 401) 473 73.1 2.2e-13
CCDS42958.1 5 gene_id:386680|Hs108|chr21 ( 271) 466 72.0 3.4e-13
CCDS42959.1 6 gene_id:386674|Hs108|chr21 ( 365) 467 72.3 3.7e-13
CCDS42954.1 1 gene_id:386677|Hs108|chr21 ( 282) 455 70.6 9.4e-13
CCDS42967.1 12 gene_id:386685|Hs108|chr21 ( 245) 447 69.4 1.8e-12
CCDS42962.1 11 gene_id:386678|Hs108|chr21 ( 298) 447 69.6 2e-12
CCDS42961.1 9 gene_id:386676|Hs108|chr21 ( 292) 442 68.9 3.1e-12
CCDS74803.1 7 gene_id:386675|Hs108|chr21 ( 370) 435 68.2 6.5e-12
CCDS45673.1 7 gene_id:100132476|Hs108|chr17 ( 155) 414 64.9 2.7e-11
CCDS11383.1 4 gene_id:84616|Hs108|chr17 ( 166) 411 64.5 3.6e-11
CCDS42331.1 3 gene_id:85290|Hs108|chr17 ( 195) 402 63.5 8.9e-11
>>CCDS42324.1 1 gene_id:81851|Hs108|chr17 (177 aa)
initn: 1472 init1: 1472 opt: 1472 Z-score: 1055.4 bits: 201.8 E(32554): 1.8e-52
Smith-Waterman score: 1472; 100.0% identity (100.0% similar) in 177 aa overlap (1-177:1-177)
10 20 30 40 50 60
pF1KE6 MACCQTSFCGFPSCSTSGTCGSSCCQPSCCETSSCQPRCCETSCCQPSCCQTSFCGFPSF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS42 MACCQTSFCGFPSCSTSGTCGSSCCQPSCCETSSCQPRCCETSCCQPSCCQTSFCGFPSF
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE6 STGGTCDSSCCQPSCCETSCCQPSCYQTSSCGTGCGIGGGIGYGQEGSSGAVSTRIRWCR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS42 STGGTCDSSCCQPSCCETSCCQPSCYQTSSCGTGCGIGGGIGYGQEGSSGAVSTRIRWCR
70 80 90 100 110 120
130 140 150 160 170
pF1KE6 PDCRVEGTCLPPCCVVSCTPPSCCQLHHAEASCCRPSYCGQSCCRPVCCCYCSEPTC
:::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS42 PDCRVEGTCLPPCCVVSCTPPSCCQLHHAEASCCRPSYCGQSCCRPVCCCYCSEPTC
130 140 150 160 170
>>CCDS42323.1 3 gene_id:81850|Hs108|chr17 (167 aa)
initn: 1170 init1: 1170 opt: 1191 Z-score: 859.2 bits: 165.4 E(32554): 1.5e-41
Smith-Waterman score: 1299; 89.8% identity (92.7% similar) in 177 aa overlap (1-177:1-167)
10 20 30 40 50 60
pF1KE6 MACCQTSFCGFPSCSTSGTCGSSCCQPSCCETSSCQPRCCETSCCQPSCCQTSFCGFPSF
:.::::::::.:::::::::::::::::::::: :::::::::::::::::
CCDS42 MTCCQTSFCGYPSCSTSGTCGSSCCQPSCCETS----------CCQPSCCQTSFCGFPSF
10 20 30 40 50
70 80 90 100 110 120
pF1KE6 STGGTCDSSCCQPSCCETSCCQPSCYQTSSCGTGCGIGGGIGYGQEGSSGAVSTRIRWCR
::.:::.:::::::::::::::::: ::::::::::::::::::::::::::::::::::
CCDS42 STSGTCSSSCCQPSCCETSCCQPSCCQTSSCGTGCGIGGGIGYGQEGSSGAVSTRIRWCR
60 70 80 90 100 110
130 140 150 160 170
pF1KE6 PDCRVEGTCLPPCCVVSCTPPSCCQLHHAEASCCRPSYCGQSCCRPVCCCYCSEPTC
:::::::::::::::::::::.::::::::::::::::::::::::::::: ::::
CCDS42 PDCRVEGTCLPPCCVVSCTPPTCCQLHHAEASCCRPSYCGQSCCRPVCCCYSCEPTC
120 130 140 150 160
>>CCDS42321.1 5 gene_id:83895|Hs108|chr17 (174 aa)
initn: 1105 init1: 1105 opt: 1132 Z-score: 817.8 bits: 157.8 E(32554): 3.1e-39
Smith-Waterman score: 1162; 80.2% identity (84.0% similar) in 187 aa overlap (1-177:1-174)
10 20 30 40 50 60
pF1KE6 MACCQTSFCGFPSCSTSGTCGSSCCQPSCCETSSCQPRCCETSCCQPSCCQTSFCGFPSF
:.::::::::.:: : ::::::::::::::::: :::: :::::::::::
CCDS42 MTCCQTSFCGYPSFSISGTCGSSCCQPSCCETS----------CCQPRSCQTSFCGFPSF
10 20 30 40 50
70 80 90 100 110
pF1KE6 STGGTCDSSCCQPSCCETSCCQPSCYQTS----------SCGTGCGIGGGIGYGQEGSSG
::.:::.:::::::::::::::::: .:: ::::::::::::.::::::::
CCDS42 STSGTCSSSCCQPSCCETSCCQPSCCETSCCQPSCCQISSCGTGCGIGGGISYGQEGSSG
60 70 80 90 100 110
120 130 140 150 160 170
pF1KE6 AVSTRIRWCRPDCRVEGTCLPPCCVVSCTPPSCCQLHHAEASCCRPSYCGQSCCRPVCCC
:::::::::::: ::::: ::::::::::::::::::::.::::::::::::::::::::
CCDS42 AVSTRIRWCRPDSRVEGTYLPPCCVVSCTPPSCCQLHHAQASCCRPSYCGQSCCRPVCCC
120 130 140 150 160 170
pF1KE6 YCSEPTC
::::
CCDS42 ---EPTC
>>CCDS58548.1 4 gene_id:728255|Hs108|chr17 (121 aa)
initn: 883 init1: 883 opt: 883 Z-score: 645.2 bits: 125.4 E(32554): 1.3e-29
Smith-Waterman score: 883; 89.1% identity (95.8% similar) in 119 aa overlap (59-177:3-121)
30 40 50 60 70 80
pF1KE6 CCETSSCQPRCCETSCCQPSCCQTSFCGFPSFSTGGTCDSSCCQPSCCETSCCQPSCYQT
: ::.::: :::::::::::::::::: ::
CCDS58 MASCSTSGTCGSSCCQPSCCETSCCQPSCCQT
10 20 30
90 100 110 120 130 140
pF1KE6 SSCGTGCGIGGGIGYGQEGSSGAVSTRIRWCRPDCRVEGTCLPPCCVVSCTPPSCCQLHH
::::::::::::::::::::.:.::::::::.:::.::::::::: .:::::::::::::
CCDS58 SSCGTGCGIGGGIGYGQEGSGGSVSTRIRWCHPDCHVEGTCLPPCYLVSCTPPSCCQLHH
40 50 60 70 80 90
150 160 170
pF1KE6 AEASCCRPSYCGQSCCRPVCCCYCSEPTC
::::::::::::::::::.:::.: ::::
CCDS58 AEASCCRPSYCGQSCCRPACCCHCCEPTC
100 110 120
>>CCDS54124.1 9 gene_id:100132386|Hs108|chr17 (210 aa)
initn: 660 init1: 252 opt: 590 Z-score: 438.1 bits: 87.8 E(32554): 4.4e-18
Smith-Waterman score: 627; 40.2% identity (56.7% similar) in 194 aa overlap (4-177:20-194)
10 20 30 40
pF1KE6 MACCQTSFCGFPSCSTSGTCGSSCCQPSCCETSSCQPRCCETSC
:: . : ::: . : ..::.:::: .: :.:.::.. :
CCDS54 MVSSCCGSVCSDQGCGQDLCQETCCR-PSCCETTCCRTTCCRPSCCVSSCCRPQCCQSVC
10 20 30 40 50
50 60 70 80 90
pF1KE6 CQP-----SCCQTSFCGF----PSFSTGGTCDSSCCQPSCCETSCCQPSCYQTSSCGTGC
::: :::::. : :: ... : .::::.::. .::.::: .:. : :
CCDS54 CQPTCSRPSCCQTTCCRTTCYRPSCCVSSCCRPQCCQPACCQPTCCRPSCCETTCCHPRC
60 70 80 90 100 110
100 110 120 130 140 150
pF1KE6 GIGGGIGYGQEGSSGAVSTRIRWCRPDCRVEGTCLPPCCVVSCTPPSCCQLHHAEASCCR
:.. :::.: : . : : :: : :.::. . .::::
CCDS54 CISSC------------------CRPSCCVSSCCKPQCCQSVCCQPNCCRPSCSISSCCR
120 130 140 150 160
160 170
pF1KE6 PSYCGQSCCRPVCC---------CY--CSEPTC
:: : .::::: :: :. : .:::
CCDS54 PSCCESSCCRPCCCVRPVCGRVSCHTTCYRPTCVISSCPRPLCCASSCC
170 180 190 200 210
>>CCDS56029.1 1 gene_id:728318|Hs108|chr17 (250 aa)
initn: 422 init1: 228 opt: 571 Z-score: 424.1 bits: 85.5 E(32554): 2.7e-17
Smith-Waterman score: 571; 42.5% identity (58.1% similar) in 186 aa overlap (3-177:13-181)
10 20 30 40
pF1KE6 MACCQTSFCGFPSC---STSGTCGSS-CCQPSCCETSSCQPRCCETSCCQ
::.:. : .: .: ::.:. ::::::: : ::: ::. .:::
CCDS56 MTHCCSPCCQPTCCRTTCCR-TTCWKPTTVTTCSSTPCCQPSCCVPSCCQP-CCHPTCCQ
10 20 30 40 50
50 60 70 80 90 100
pF1KE6 PSCCQTSFCGFPSFSTGGTCDSSCCQPSCCETSCCQPSCYQTSSCG-TGCGIGGGIGYGQ
.::.:. : : :: .:::::::: : ::::.: .: :: :.: :..
CCDS56 NTCCRTTCCQ-P------TCVASCCQPSCCSTPCCQPTCCGSSCCGQTSC--GSSCCQPI
60 70 80 90 100
110 120 130 140 150 160
pF1KE6 EGSSGAVSTRIRWCRPDCRVEGTCL-PPCCVVSCTPPSCCQLHHAEASCCRPSYCGQSCC
::: :.: : . :. :: .: :.::. . .:: : : : ::
CCDS56 CGSSCCQPC----CHPTCY-QTICFRTTCCQPTCCQPTCCRNTSCQPTCC-GSSCCQPCC
110 120 130 140 150 160
170
pF1KE6 RPVCC---CY--CSEPTC
.:.:: : : .:.:
CCDS56 HPTCCQTICRSTCCQPSCVTRCCSTPCCQPTCGGSSCCSQTCNESSYCLPCCRPTCCQTT
170 180 190 200 210 220
>>CCDS54125.1 6 gene_id:81871|Hs108|chr17 (205 aa)
initn: 724 init1: 365 opt: 558 Z-score: 415.8 bits: 83.7 E(32554): 7.7e-17
Smith-Waterman score: 640; 42.0% identity (58.0% similar) in 176 aa overlap (4-177:15-175)
10 20 30 40
pF1KE6 MACCQTSFCGFPSCSTSGTCGSSCCQPSCCETSSCQPRCCETSCCQPSC
: : ::: . : ..::.:::: .: :.:.::.. ::::.:
CCDS54 MVSSCCGSVCSDQGCGLETCCRPSCCQTTCCRTTCCRPSCCVSSCCRPQCCQSVCCQPTC
10 20 30 40 50 60
50 60 70 80 90 100
pF1KE6 CQTSFCGFPSFSTGGTCDSSCCQPSCCETSCCQPSCYQTSSCGTGCGIGGGIGYGQEGSS
:. : : :: : ..::.:::: .:::.:.: :. : : :
CCDS54 CRPSCC--PSCCQTTCCRTTCCRPSCCVSSCCRPQCCQSVCCQPTCC----------RPS
70 80 90 100
110 120 130 140 150 160
pF1KE6 GAVSTRIRWCRPDCRVEGTCLPPCCVVSCTPPSCCQLHHAEASCCRPSYCGQSCCRPVCC
..:. :::.: : : :: : :.::. .:::::: : .::::: ::
CCDS54 CSISSC---CRPSCCVSRCCRSQCCQSVCCQPTCCRPSCCISSCCRPSCCESSCCRPCCC
110 120 130 140 150 160
170
pF1KE6 --CYCSEPTC
: : .:.:
CCDS54 RPCCCLRPVCGRVSCHTTCYRPTCVISTCPRPLCCASSCC
170 180 190 200
>>CCDS45674.1 8 gene_id:728224|Hs108|chr17 (185 aa)
initn: 252 init1: 252 opt: 528 Z-score: 395.3 bits: 79.7 E(32554): 1.1e-15
Smith-Waterman score: 560; 39.2% identity (56.4% similar) in 181 aa overlap (2-177:4-155)
10 20 30 40 50
pF1KE6 MACCQTSFCGFPSCSTSGTCGSSCCQPSCCETSSCQPRCCETS-----CCQPSCCQTS
.:: : :. .:. . : .:: ::::.:. :. : . : ::.:.::: :
CCDS45 MVNSCCG-SVCSDQGCGQD-LCQETCCCPSCCQTTCCRTTCYRPSYSVSCCCRPQCCQ-S
10 20 30 40 50
60 70 80 90 100 110
pF1KE6 FCGFPSFSTGGTCDSSCCQPSCCETSCCQPSCYQTSSCGTGCGIGGGIGYGQEGSSGAVS
: :. . : ::::.:.::.. ::::.: . : : ..:
CCDS45 VCCQPTCCRPSCCVSSCCKPQCCQSVCCQPTCCHPSCCISSC------------------
60 70 80 90
120 130 140 150 160 170
pF1KE6 TRIRWCRPDCRVEGTCLPPCCVVSCTPPSCCQLHHAEASCCRPSYCGQSCCRPVCCCYCS
:::.: : . : : :: : :.::. . .:::::: : .::::: :::
CCDS45 -----CRPSCCVSSCCKPQCCQSVCCQPNCCRPSCSISSCCRPSCCESSCCRP-CCCL--
100 110 120 130 140 150
pF1KE6 EPTC
.:.:
CCDS45 RPVCGRVSCHTTCYRPACVISTCPRPVCCASSCC
160 170 180
>>CCDS32649.1 12 gene_id:83755|Hs108|chr17 (201 aa)
initn: 542 init1: 285 opt: 506 Z-score: 379.5 bits: 76.9 E(32554): 8.1e-15
Smith-Waterman score: 609; 41.7% identity (54.5% similar) in 187 aa overlap (2-177:24-185)
10 20 30
pF1KE6 MACCQTSFCGFPSCSTSGTCGSSCCQPSCCETSSCQPR
.::::. : : : : ::::.:.::.. :::
CCDS32 MVNSCCGSVCSDQGCGLENCCRPSCCQTTCCRTTCCRPS-CCVSSCCRPQCCQSVCCQPT
10 20 30 40 50
40 50 60 70 80 90
pF1KE6 CCETSCCQPSCCQTSFCGFPSFSTGGTCDSSCCQPSCCETSCCQPSCYQTSSCGTGCGIG
::. :::: .::.:. : :: : ::::.:.::.. ::::.: . : : : :
CCDS32 CCRPSCCQTTCCRTTCCR-PS-----CCVSSCCRPQCCQSVCCQPTCCRPSCCQTTC---
60 70 80 90 100 110
100 110 120 130 140 150
pF1KE6 GGIGYGQEGSSGAVSTRIRWCRPDCRVEGTCLPPCCVVSCTPPSCCQLHHAEASCCRPSY
: :::.: : . : : :: : :.::. .: : ::
CCDS32 ---------------CRTTCCRPSCCVSSCCRPQCCQSVCCQPTCCRPSCCISSSCCPSC
120 130 140 150
160 170
pF1KE6 CGQSCCRPVCC---------CY--CSEPTC
: .::::: :: :. : .:::
CCDS32 CESSCCRPCCCLRPVCGRVSCHTTCYRPTCVISTCPRPLCCASSCC
160 170 180 190 200
>>CCDS32650.1 5 gene_id:85289|Hs108|chr17 (181 aa)
initn: 428 init1: 284 opt: 479 Z-score: 361.1 bits: 73.4 E(32554): 8.6e-14
Smith-Waterman score: 598; 41.8% identity (56.0% similar) in 184 aa overlap (6-177:3-165)
10 20 30 40 50
pF1KE6 MACCQTSFCGFPSCSTSGTCG-SSCCQPSCCETSSCQPRCCETSCCQPSCCQTSFCGFPS
.: :: : :. .:: .::.::::.:. :. ::. :::.:.::: : : :.
CCDS32 MVSSCCG--SVSSEQSCGLENCCRPSCCQTTCCRTTCCRPSCCKPQCCQ-SVCYQPT
10 20 30 40 50
60 70 80 90 100 110
pF1KE6 FSTGGTCDSSCCQPSCCETSCCQPSCYQTSSCGTGCGIGGGIGYGQEGSSGAVSTRIRWC
. : ::::.: :::.:::.: : ::. : : : : :
CCDS32 CCHPSCCISSCCRPYCCESSCCRPCCCQTTCCRTTC------------------CRTTCC
60 70 80 90
120 130 140 150 160 170
pF1KE6 RPDCRVEGTCLPPCCVVSCTPPSCCQLHHAEASCCRPSYCGQSCCRPVCC---------C
:.: : . : : :: : :.::. .:::.:: : .::::: :: :
CCDS32 CPSCCVSSCCRPQCCQSVCCQPTCCRPSCCISSCCHPSCCESSCCRPCCCVRPVCGRVSC
100 110 120 130 140 150
pF1KE6 Y--CSEPTC
. : .:::
CCDS32 HTTCYRPTCVISTCPRPLCCASSCC
160 170 180
177 residues in 1 query sequences
18511270 residues in 32554 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Tue Nov 8 14:37:09 2016 done: Tue Nov 8 14:37:10 2016
Total Scan time: 1.390 Total Display time: -0.010
Function used was FASTA [36.3.4 Apr, 2011]