Result of FASTA (ccds) for
pFN21AE6585
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KE6585, 159 aa
1>>>pF1KE6585 159 - 159 aa - 159 aa
Library: human.CCDS.faa
18511270 residues in 32554 sequences
Statistics: Expectation_n fit: rho(ln(x))= 6.0272+/-0.00128; mu= 12.4820+/- 0.077
mean_var=253.9956+/-48.110, 0's: 0 Z-trim(111.0): 133 B-trim: 0 in 0/51
Lambda= 0.080475
statistics sampled from 11881 (12015) to 11881 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.669), E-opt: 0.2 (0.369), width: 16
Scan time: 1.590
The best scores are: opt bits E(32554)
CCDS11385.1 3 gene_id:83900|Hs108|chr17 ( 159) 1397 174.1 3.2e-44
CCDS42334.1 8 gene_id:83901|Hs108|chr17 ( 159) 1286 161.2 2.4e-40
CCDS11386.1 4 gene_id:85280|Hs108|chr17 ( 154) 1192 150.3 4.6e-37
CCDS56029.1 1 gene_id:728318|Hs108|chr17 ( 250) 1018 130.4 7.1e-31
CCDS54127.1 9 gene_id:81870|Hs108|chr17 ( 169) 967 124.2 3.5e-29
CCDS32651.1 2 gene_id:83899|Hs108|chr17 ( 174) 966 124.1 3.9e-29
CCDS59287.1 7 gene_id:100505724|Hs108|chr17 ( 169) 962 123.6 5.3e-29
CCDS59286.1 6 gene_id:100507608|Hs108|chr17 ( 160) 752 99.2 1.1e-21
CCDS54124.1 9 gene_id:100132386|Hs108|chr17 ( 210) 753 99.5 1.2e-21
CCDS54125.1 6 gene_id:81871|Hs108|chr17 ( 205) 714 95.0 2.7e-20
CCDS32649.1 12 gene_id:83755|Hs108|chr17 ( 201) 696 92.9 1.1e-19
CCDS32650.1 5 gene_id:85289|Hs108|chr17 ( 181) 676 90.5 5.4e-19
CCDS45675.1 11 gene_id:653240|Hs108|chr17 ( 195) 656 88.2 2.8e-18
CCDS11384.1 2 gene_id:85291|Hs108|chr17 ( 136) 620 83.8 4.3e-17
CCDS11383.1 4 gene_id:84616|Hs108|chr17 ( 166) 612 83.0 9e-17
CCDS45674.1 8 gene_id:728224|Hs108|chr17 ( 185) 608 82.6 1.3e-16
CCDS45673.1 7 gene_id:100132476|Hs108|chr17 ( 155) 591 80.5 4.7e-16
CCDS42958.1 5 gene_id:386680|Hs108|chr21 ( 271) 563 77.7 5.9e-15
CCDS42962.1 11 gene_id:386678|Hs108|chr21 ( 298) 562 77.6 6.7e-15
CCDS74803.1 7 gene_id:386675|Hs108|chr21 ( 370) 541 75.3 4e-14
CCDS42955.1 2 gene_id:386679|Hs108|chr21 ( 255) 534 74.2 5.9e-14
CCDS56032.1 1 gene_id:100505753|Hs108|chr17 ( 517) 514 72.5 4.1e-13
CCDS13713.1 8 gene_id:386681|Hs108|chr21 ( 259) 506 71.0 5.6e-13
CCDS42961.1 9 gene_id:386676|Hs108|chr21 ( 292) 504 70.9 7e-13
CCDS42967.1 12 gene_id:386685|Hs108|chr21 ( 245) 496 69.8 1.2e-12
CCDS42956.1 3 gene_id:386682|Hs108|chr21 ( 221) 484 68.3 3.1e-12
CCDS42331.1 3 gene_id:85290|Hs108|chr17 ( 195) 481 67.9 3.7e-12
CCDS42954.1 1 gene_id:386677|Hs108|chr21 ( 282) 475 67.5 7.1e-12
CCDS42957.1 4 gene_id:386672|Hs108|chr21 ( 401) 472 67.4 1.1e-11
CCDS33585.1 10 gene_id:353333|Hs108|chr21 ( 251) 462 65.9 1.9e-11
CCDS42959.1 6 gene_id:386674|Hs108|chr21 ( 365) 459 65.8 2.9e-11
CCDS41591.1 3 gene_id:387266|Hs108|chr11 ( 238) 455 65.0 3.3e-11
>>CCDS11385.1 3 gene_id:83900|Hs108|chr17 (159 aa)
initn: 1397 init1: 1397 opt: 1397 Z-score: 907.3 bits: 174.1 E(32554): 3.2e-44
Smith-Waterman score: 1397; 100.0% identity (100.0% similar) in 159 aa overlap (1-159:1-159)
10 20 30 40 50 60
pF1KE6 MTHCCSPCCQPTCCRTTCWQPTTVTTCSSTPCCQPSCCVSSCCQPCCHPTCCQNTCCRTT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS11 MTHCCSPCCQPTCCRTTCWQPTTVTTCSSTPCCQPSCCVSSCCQPCCHPTCCQNTCCRTT
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE6 CCQPICVTSCCQPSCCSTPCCQPTCCGSSCGQSSSCAPVYCRRTCYHPTSVCLPGCLNQS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS11 CCQPICVTSCCQPSCCSTPCCQPTCCGSSCGQSSSCAPVYCRRTCYHPTSVCLPGCLNQS
70 80 90 100 110 120
130 140 150
pF1KE6 CGSNCCQPCCRPACCETTCCRTTCFQPTCVYSCCQPSCC
:::::::::::::::::::::::::::::::::::::::
CCDS11 CGSNCCQPCCRPACCETTCCRTTCFQPTCVYSCCQPSCC
130 140 150
>>CCDS42334.1 8 gene_id:83901|Hs108|chr17 (159 aa)
initn: 1217 init1: 1217 opt: 1286 Z-score: 837.7 bits: 161.2 E(32554): 2.4e-40
Smith-Waterman score: 1286; 91.5% identity (93.3% similar) in 164 aa overlap (1-159:1-159)
10 20 30 40 50 60
pF1KE6 MTHCCSPCCQPTCCRTTCWQPTTVTTCSSTPCCQPSCCVSSCCQPCCHPTCCQNTCCRTT
:::::::::::::::::::.:::::::::::::::::::::::::::.:::::: :
CCDS42 MTHCCSPCCQPTCCRTTCWKPTTVTTCSSTPCCQPSCCVSSCCQPCCRPTCCQN-----T
10 20 30 40 50
70 80 90 100 110
pF1KE6 CCQPICVTSCCQPSCCSTPCCQPTCCG-----SSCGQSSSCAPVYCRRTCYHPTSVCLPG
::::::::::::::::::::::::::: ::::::::::::::::::::::.:::::
CCDS42 CCQPICVTSCCQPSCCSTPCCQPTCCGQTSCGSSCGQSSSCAPVYCRRTCYHPTTVCLPG
60 70 80 90 100 110
120 130 140 150
pF1KE6 CLNQSCGSNCCQPCCRPACCETTCCRTTCFQPTCVYSCCQPSCC
::::::::::::::::::::::::::::::::::: ::::::::
CCDS42 CLNQSCGSNCCQPCCRPACCETTCCRTTCFQPTCVSSCCQPSCC
120 130 140 150
>>CCDS11386.1 4 gene_id:85280|Hs108|chr17 (154 aa)
initn: 995 init1: 995 opt: 1192 Z-score: 778.8 bits: 150.3 E(32554): 4.6e-37
Smith-Waterman score: 1192; 86.0% identity (88.4% similar) in 164 aa overlap (1-159:1-154)
10 20 30 40 50
pF1KE6 MTHCCSPCCQPTCCRTTC-----WQPTTVTTCSSTPCCQPSCCVSSCCQPCCHPTCCQNT
:::::::::::::::::: :.:::::::::::::::::::::::::::.::::::
CCDS11 MTHCCSPCCQPTCCRTTCCRTTCWKPTTVTTCSSTPCCQPSCCVSSCCQPCCRPTCCQN-
10 20 30 40 50
60 70 80 90 100 110
pF1KE6 CCRTTCCQPICVTSCCQPSCCSTPCCQPTCCGSSCGQSSSCAPVYCRRTCYHPTSVCLPG
::::: ::::::::::::::::::::::::: :::::::::::::::.::.:::::
CCDS11 ----TCCQPTCVTSCCQPSCCSTPCCQPTCCGSSCDQSSSCAPVYCRRTCYYPTTVCLPG
60 70 80 90 100 110
120 130 140 150
pF1KE6 CLNQSCGSNCCQPCCRPACCETTCCRTTCFQPTCVYSCCQPSCC
:::::::::::::::::::::::: :::::: ::::: ::
CCDS11 CLNQSCGSNCCQPCCRPACCETTC-----FQPTCVSSCCQPFCC
120 130 140 150
>>CCDS56029.1 1 gene_id:728318|Hs108|chr17 (250 aa)
initn: 794 init1: 794 opt: 1018 Z-score: 667.8 bits: 130.4 E(32554): 7.1e-31
Smith-Waterman score: 1032; 65.1% identity (72.4% similar) in 192 aa overlap (1-159:1-191)
10 20 30 40 50
pF1KE6 MTHCCSPCCQPTCCRTTC-----WQPTTVTTCSSTPCCQPSCCVSSCCQPCCHPTCCQNT
:::::::::::::::::: :.::::::::::::::::::: :::::::::::::::
CCDS56 MTHCCSPCCQPTCCRTTCCRTTCWKPTTVTTCSSTPCCQPSCCVPSCCQPCCHPTCCQNT
10 20 30 40 50 60
60 70 80 90 100
pF1KE6 CCRTTCCQPICVTSCCQPSCCSTPCCQPTCCGSSC-GQ----SSSCAPV---YCRRTCYH
::::::::: ::.:::::::::::::::::::::: :: :: : :. : . : :
CCDS56 CCRTTCCQPTCVASCCQPSCCSTPCCQPTCCGSSCCGQTSCGSSCCQPICGSSCCQPCCH
70 80 90 100 110 120
110 120 130 140
pF1KE6 PT---------SVCLPGCLNQSC-----------GSNCCQPCCRPACCETTCCRTTCFQP
:: . : : : . .: ::.::::::.:.::.: : :.:: ::
CCDS56 PTCYQTICFRTTCCQPTCCQPTCCRNTSCQPTCCGSSCCQPCCHPTCCQTIC-RSTCCQP
130 140 150 160 170
150
pF1KE6 TCVYSCCQPSCC
.:: ::. ::
CCDS56 SCVTRCCSTPCCQPTCGGSSCCSQTCNESSYCLPCCRPTCCQTTCYRTTCCRPSCCCSPC
180 190 200 210 220 230
>>CCDS54127.1 9 gene_id:81870|Hs108|chr17 (169 aa)
initn: 1151 init1: 887 opt: 967 Z-score: 637.3 bits: 124.2 E(32554): 3.5e-29
Smith-Waterman score: 1293; 87.6% identity (91.7% similar) in 169 aa overlap (1-159:1-169)
10 20 30 40 50 60
pF1KE6 MTHCCSPCCQPTCCRTTCWQPTTVTTCSSTPCCQPSCCVSSCCQPCCHPTCCQNTCCRTT
:::::::::::::::::::.:::::::::::::::::::::::::::.:.::::::::::
CCDS54 MTHCCSPCCQPTCCRTTCWKPTTVTTCSSTPCCQPSCCVSSCCQPCCRPACCQNTCCRTT
10 20 30 40 50 60
70 80 90 100 110
pF1KE6 CCQPICVTSCCQPSCCSTPCCQPTCCGSSC----------GQSSSCAPVYCRRTCYHPTS
:::: :.::::::::::: :::: :::::: ::::::::::::::::.::.
CCDS54 CCQPTCLTSCCQPSCCSTTCCQPICCGSSCCGQTSCGSSCGQSSSCAPVYCRRTCYYPTT
70 80 90 100 110 120
120 130 140 150
pF1KE6 VCLPGCLNQSCGSNCCQPCCRPACCETTCCRTTCFQPTCVYSCCQPSCC
:::::::::::::.:::::::::::::::::::::::::: ::::::::
CCDS54 VCLPGCLNQSCGSSCCQPCCRPACCETTCCRTTCFQPTCVSSCCQPSCC
130 140 150 160
>>CCDS32651.1 2 gene_id:83899|Hs108|chr17 (174 aa)
initn: 1562 init1: 895 opt: 966 Z-score: 636.6 bits: 124.1 E(32554): 3.9e-29
Smith-Waterman score: 1301; 87.4% identity (90.2% similar) in 174 aa overlap (1-159:1-174)
10 20 30 40 50
pF1KE6 MTHCCSPCCQPTCCRTTC-----WQPTTVTTCSSTPCCQPSCCVSSCCQPCCHPTCCQNT
:::::::::::::::::: :.:::::::::::::::.:::::::::::.:::::::
CCDS32 MTHCCSPCCQPTCCRTTCCRTTCWKPTTVTTCSSTPCCQPACCVSSCCQPCCRPTCCQNT
10 20 30 40 50 60
60 70 80 90 100
pF1KE6 CCRTTCCQPICVTSCCQPSCCSTPCCQPTCCGSSC----------GQSSSCAPVYCRRTC
::::::::: ::::::::::::::::::::::::: :::::::::::::::
CCDS32 CCRTTCCQPTCVTSCCQPSCCSTPCCQPTCCGSSCCGQTSCGSSCGQSSSCAPVYCRRTC
70 80 90 100 110 120
110 120 130 140 150
pF1KE6 YHPTSVCLPGCLNQSCGSNCCQPCCRPACCETTCCRTTCFQPTCVYSCCQPSCC
:.::.:::::::::::::::::::::::::::::::::::::::: ::::::::
CCDS32 YYPTTVCLPGCLNQSCGSNCCQPCCRPACCETTCCRTTCFQPTCVSSCCQPSCC
130 140 150 160 170
>>CCDS59287.1 7 gene_id:100505724|Hs108|chr17 (169 aa)
initn: 1513 init1: 867 opt: 962 Z-score: 634.2 bits: 123.6 E(32554): 5.3e-29
Smith-Waterman score: 1300; 88.8% identity (91.7% similar) in 169 aa overlap (1-159:1-169)
10 20 30 40 50 60
pF1KE6 MTHCCSPCCQPTCCRTTCWQPTTVTTCSSTPCCQPSCCVSSCCQPCCHPTCCQNTCCRTT
:::::::::::::::::::.::::::::::::::::::::::::::::::::::::::::
CCDS59 MTHCCSPCCQPTCCRTTCWKPTTVTTCSSTPCCQPSCCVSSCCQPCCHPTCCQNTCCRTT
10 20 30 40 50 60
70 80 90 100 110
pF1KE6 CCQPICVTSCCQPSCCSTPCCQPTCCGSSC-GQSS---------SCAPVYCRRTCYHPTS
:::: :::::::::::::::::: :::::: ::.: ::::.:::::::::::
CCDS59 CCQPTCVTSCCQPSCCSTPCCQPICCGSSCCGQTSCGSSCCQPSSCAPIYCRRTCYHPTS
70 80 90 100 110 120
120 130 140 150
pF1KE6 VCLPGCLNQSCGSNCCQPCCRPACCETTCCRTTCFQPTCVYSCCQPSCC
: :::::::::::.:::::::::::::::::::::::::: :::::.::
CCDS59 VYLPGCLNQSCGSSCCQPCCRPACCETTCCRTTCFQPTCVTSCCQPACC
130 140 150 160
>>CCDS59286.1 6 gene_id:100507608|Hs108|chr17 (160 aa)
initn: 2461 init1: 699 opt: 752 Z-score: 502.6 bits: 99.2 E(32554): 1.1e-21
Smith-Waterman score: 1079; 80.5% identity (84.3% similar) in 159 aa overlap (1-144:1-159)
10 20 30 40 50
pF1KE6 MTHCCSPCCQPTCCRTTC-----WQPTTVTTCSSTPCCQPSCCVSSCCQPCCHPTCCQNT
::::::: :::::::::: :::: :::::::::::::::::::::: :::::::::
CCDS59 MTHCCSPGCQPTCCRTTCCRTTCWQPTIVTTCSSTPCCQPSCCVSSCCQPYCHPTCCQNT
10 20 30 40 50 60
60 70 80 90 100
pF1KE6 CCRTTCCQPICVTSCCQPSCCSTPCCQPTCCGSSC----------GQSSSCAPVYCRRTC
::::::::: ::::::::::::::: :: :::::: :::::::::::::::
CCDS59 CCRTTCCQPTCVTSCCQPSCCSTPCYQPICCGSSCCGQTSCGSSCGQSSSCAPVYCRRTC
70 80 90 100 110 120
110 120 130 140 150
pF1KE6 YHPTSVCLPGCLNQSCGSNCCQPCCRPACCETTCCRTTCFQPTCVYSCCQPSCC
::::.:::::::::::::.::::: :::: ..::. .:
CCDS59 YHPTTVCLPGCLNQSCGSSCCQPCYCPACCVSSCCQHSCC
130 140 150 160
>>CCDS54124.1 9 gene_id:100132386|Hs108|chr17 (210 aa)
initn: 1523 init1: 294 opt: 753 Z-score: 502.2 bits: 99.5 E(32554): 1.2e-21
Smith-Waterman score: 753; 52.8% identity (69.6% similar) in 161 aa overlap (4-159:24-175)
10 20 30
pF1KE6 MTHCCSP-CCQPTCCRTTCWQPTTVTTCSSTPCCQPSCCV
:: : ::. ::::::: .:. : . ::.:.::
CCDS54 MVSSCCGSVCSDQGCGQDLCQETCCRPSCCETTCCRTTCCRPS----CCVSSCCRPQCCQ
10 20 30 40 50
40 50 60 70 80 90
pF1KE6 SSCCQPCC-HPTCCQNTCCRTTCCQP-ICVTSCCQPSCCSTPCCQPTCCGSSCGQSSSCA
: :::: : .:.:::.::::::: .: ::.:::.:.::. ::::::: :: ... :
CCDS54 SVCCQPTCSRPSCCQTTCCRTTCYRPSCCVSSCCRPQCCQPACCQPTCCRPSCCETTCCH
60 70 80 90 100 110
100 110 120 130 140 150
pF1KE6 PVYCRRTCYHPTSVCLPGCLN-QSCGSNCCQP-CCRPACCETTCCRTTCFQPTCVYSCCQ
: : .: .: : :. .: . : : : :::: ::::.: ..::: .: : :::.
CCDS54 PRCCISSCCRP-SCCVSSCCKPQCCQSVCCQPNCCRPSCSISSCCRPSC----CESSCCR
120 130 140 150 160 170
pF1KE6 PSCC
: ::
CCDS54 PCCCVRPVCGRVSCHTTCYRPTCVISSCPRPLCCASSCC
180 190 200 210
>>CCDS54125.1 6 gene_id:81871|Hs108|chr17 (205 aa)
initn: 1406 init1: 388 opt: 714 Z-score: 477.8 bits: 95.0 E(32554): 2.7e-20
Smith-Waterman score: 772; 52.8% identity (67.1% similar) in 161 aa overlap (4-159:20-170)
10 20 30 40
pF1KE6 MTHCCSP-CCQPTCCRTTCWQPTT-VTTCSSTPCCQPSCCVSSC
:: : ::: ::::::: .:. :..: ::: :: .:
CCDS54 MVSSCCGSVCSDQGCGLETCCRPSCCQTTCCRTTCCRPSCCVSSCCRPQCCQSVCCQPTC
10 20 30 40 50 60
50 60 70 80 90 100
pF1KE6 CQPCCHPTCCQNTCCRTTCCQP-ICVTSCCQPSCCSTPCCQPTCCGSSCGQSSSCAPVYC
:.: : :.:::.::::::::.: ::.:::.:.::.. ::::::: ::. :: : : :
CCDS54 CRPSCCPSCCQTTCCRTTCCRPSCCVSSCCRPQCCQSVCCQPTCCRPSCSISSCCRPSCC
70 80 90 100 110 120
110 120 130 140 150
pF1KE6 RRTCYHPTSVCLPGCLNQSCGSNCCQP-CCRPACCETTCCRTTCFQPTCVYSCC-QPSCC
: : .: : : :::: ::::.:: ..::: .: . .: :: .: ::
CCDS54 VSRC----------CRSQCCQSVCCQPTCCRPSCCISSCCRPSCCESSCCRPCCCRPCCC
130 140 150 160 170
CCDS54 LRPVCGRVSCHTTCYRPTCVISTCPRPLCCASSCC
180 190 200
159 residues in 1 query sequences
18511270 residues in 32554 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Tue Nov 8 14:35:38 2016 done: Tue Nov 8 14:35:38 2016
Total Scan time: 1.590 Total Display time: -0.020
Function used was FASTA [36.3.4 Apr, 2011]