Result of FASTA (ccds) for
pFN21AE6581
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KE6581, 132 aa
1>>>pF1KE6581 132 - 132 aa - 132 aa
Library: human.CCDS.faa
18511270 residues in 32554 sequences
Statistics: Expectation_n fit: rho(ln(x))= 5.3946+/-0.0011; mu= 9.7422+/- 0.066
mean_var=52.7795+/-10.375, 0's: 0 Z-trim(100.2): 24 B-trim: 2 in 1/48
Lambda= 0.176539
statistics sampled from 5999 (6018) to 5999 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.549), E-opt: 0.2 (0.185), width: 16
Scan time: 1.080
The best scores are: opt bits E(32554)
CCDS3712.1 FABP2 gene_id:2169|Hs108|chr4 ( 132) 843 222.9 4.6e-59
CCDS5127.1 FABP7 gene_id:2173|Hs108|chr6 ( 132) 280 79.5 6.7e-16
CCDS342.1 FABP3 gene_id:2170|Hs108|chr1 ( 133) 264 75.4 1.1e-14
CCDS83121.1 FABP7 gene_id:2173|Hs108|chr6 ( 166) 258 73.9 4.1e-14
CCDS6230.1 FABP4 gene_id:2167|Hs108|chr8 ( 132) 248 71.3 1.9e-13
CCDS6229.1 PMP2 gene_id:5375|Hs108|chr8 ( 132) 238 68.8 1.1e-12
CCDS10301.1 CRABP1 gene_id:1381|Hs108|chr15 ( 137) 236 68.3 1.6e-12
CCDS1152.1 CRABP2 gene_id:1382|Hs108|chr1 ( 138) 227 66.0 8.1e-12
>>CCDS3712.1 FABP2 gene_id:2169|Hs108|chr4 (132 aa)
initn: 843 init1: 843 opt: 843 Z-score: 1173.9 bits: 222.9 E(32554): 4.6e-59
Smith-Waterman score: 843; 99.2% identity (100.0% similar) in 132 aa overlap (1-132:1-132)
10 20 30 40 50 60
pF1KE6 MAFDSTWKVDRSENYDKFMEKMGVNIVKRKLAAHDNLKLTITQEGNKFTVKESSAFRNIE
::::::::::::::::::::::::::::::::::::::::::::::::::::::.:::::
CCDS37 MAFDSTWKVDRSENYDKFMEKMGVNIVKRKLAAHDNLKLTITQEGNKFTVKESSTFRNIE
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE6 VVFELGVTFNYNLADGTELRGTWSLEGNKLIGKFKRTDNGNELNTVREIIGDELVQTYVY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS37 VVFELGVTFNYNLADGTELRGTWSLEGNKLIGKFKRTDNGNELNTVREIIGDELVQTYVY
70 80 90 100 110 120
130
pF1KE6 EGVEAKRIFKKD
::::::::::::
CCDS37 EGVEAKRIFKKD
130
>>CCDS5127.1 FABP7 gene_id:2173|Hs108|chr6 (132 aa)
initn: 270 init1: 227 opt: 280 Z-score: 398.9 bits: 79.5 E(32554): 6.7e-16
Smith-Waterman score: 280; 35.4% identity (70.8% similar) in 130 aa overlap (2-131:4-131)
10 20 30 40 50
pF1KE6 MAFDSTWKVDRSENYDKFMEKMGVNIVKRKLAAHDNLKLTITQEGNKFTVKESSAFRN
:: .:::. :.:.:..:. .::... :... . . :.:::.: ... :.:.:
CCDS51 MVEAFCATWKLTNSQNFDEYMKALGVGFATRQVGNVTKPTVIISQEGDKVVIRTLSTFKN
10 20 30 40 50 60
60 70 80 90 100 110
pF1KE6 IEVVFELGVTFNYNLADGTELRGTWSLEGNKLIGKFKRTDNGNELNTVREIIGDELVQTY
:. :.:: :. . :: . ... ::.:.::. .... : :.: : :::: ..:.:
CCDS51 TEISFQLGEEFDETTADDRNCKSVVSLDGDKLV-HIQKWD-GKETNFVREIKDGKMVMTL
70 80 90 100 110
120 130
pF1KE6 VYEGVEAKRIFKKD
.. : : : ..:
CCDS51 TFGDVVAVRHYEKA
120 130
>>CCDS342.1 FABP3 gene_id:2170|Hs108|chr1 (133 aa)
initn: 264 init1: 219 opt: 264 Z-score: 376.8 bits: 75.4 E(32554): 1.1e-14
Smith-Waterman score: 264; 32.8% identity (70.2% similar) in 131 aa overlap (2-132:4-132)
10 20 30 40 50
pF1KE6 MAFDSTWKVDRSENYDKFMEKMGVNIVKRKLAAHDNLKLTITQEGNKFTVKESSAFRN
:: .:::. :.:.: .:...::... :..:. . : ..:. .:.: :.:.:
CCDS34 MVDAFLGTWKLVDSKNFDDYMKSLGVGFATRQVASMTKPTTIIEKNGDILTLKTHSTFKN
10 20 30 40 50 60
60 70 80 90 100 110
pF1KE6 IEVVFELGVTFNYNLADGTELRGTWSLEGNKLIGKFKRTDNGNELNTVREIIGDELVQTY
:. :.::: :. . :: .... .:.:.::. .... : :.: . :::.: .:. :
CCDS34 TEISFKLGVEFDETTADDRKVKSIVTLDGGKLV-HLQKWD-GQETTLVRELIDGKLILTL
70 80 90 100 110
120 130
pF1KE6 VYEGVEAKRIFKKD
.. . : ..:.
CCDS34 THGTAVCTRTYEKEA
120 130
>>CCDS83121.1 FABP7 gene_id:2173|Hs108|chr6 (166 aa)
initn: 270 init1: 227 opt: 258 Z-score: 366.9 bits: 73.9 E(32554): 4.1e-14
Smith-Waterman score: 258; 36.0% identity (71.9% similar) in 114 aa overlap (2-115:4-115)
10 20 30 40 50
pF1KE6 MAFDSTWKVDRSENYDKFMEKMGVNIVKRKLAAHDNLKLTITQEGNKFTVKESSAFRN
:: .:::. :.:.:..:. .::... :... . . :.:::.: ... :.:.:
CCDS83 MVEAFCATWKLTNSQNFDEYMKALGVGFATRQVGNVTKPTVIISQEGDKVVIRTLSTFKN
10 20 30 40 50 60
60 70 80 90 100 110
pF1KE6 IEVVFELGVTFNYNLADGTELRGTWSLEGNKLIGKFKRTDNGNELNTVREIIGDELVQTY
:. :.:: :. . :: . ... ::.:.::. .... : :.: : :::: ..:
CCDS83 TEISFQLGEEFDETTADDRNCKSVVSLDGDKLV-HIQKWD-GKETNFVREIKDGKMVMVS
70 80 90 100 110
120 130
pF1KE6 VYEGVEAKRIFKKD
CCDS83 NDNSPFFLVFFSSPHTSHLLPSSSLLLPFFLLPSFFNNTSLARFFNYM
120 130 140 150 160
>>CCDS6230.1 FABP4 gene_id:2167|Hs108|chr8 (132 aa)
initn: 240 init1: 214 opt: 248 Z-score: 354.9 bits: 71.3 E(32554): 1.9e-13
Smith-Waterman score: 248; 33.1% identity (67.7% similar) in 130 aa overlap (2-131:4-131)
10 20 30 40 50
pF1KE6 MAFDSTWKVDRSENYDKFMEKMGVNIVKRKLAAHDNLKLTITQEGNKFTVKESSAFRN
:: .:::. :::.: .:...::... ::.:. . .. :. .:. .:.: :.:.:
CCDS62 MCDAFVGTWKLVSSENFDDYMKEVGVGFATRKVAGMAKPNMIISVNGDVITIKSESTFKN
10 20 30 40 50 60
60 70 80 90 100 110
pF1KE6 IEVVFELGVTFNYNLADGTELRGTWSLEGNKLIGKFKRTDNGNELNTVREIIGDELVQTY
:. : :: :. :: ....: .:.:. :. : ... .. :: :.::
CCDS62 TEISFILGQEFDEVTADDRKVKSTITLDGGVLVHVQKWDGKSTTIKRKRE--DDKLVVEC
70 80 90 100 110
120 130
pF1KE6 VYEGVEAKRIFKKD
:..:: . :....
CCDS62 VMKGVTSTRVYERA
120 130
>>CCDS6229.1 PMP2 gene_id:5375|Hs108|chr8 (132 aa)
initn: 224 init1: 188 opt: 238 Z-score: 341.1 bits: 68.8 E(32554): 1.1e-12
Smith-Waterman score: 238; 31.0% identity (68.2% similar) in 129 aa overlap (3-131:5-131)
10 20 30 40 50
pF1KE6 MAFDSTWKVDRSENYDKFMEKMGVNIVKRKLAAHDNLKLTITQEGNKFTVKESSAFRN
: .:::. :::.: .:. .::... :::. . . :...:. .:.. :.:.:
CCDS62 MSNKFLGTWKLVSSENFDDYMKALGVGLATRKLGNLAKPTVIISKKGDIITIRTESTFKN
10 20 30 40 50 60
60 70 80 90 100 110
pF1KE6 IEVVFELGVTFNYNLADGTELRGTWSLEGNKLIGKFKRTDNGNELNTVREIIGDELVQTY
:. :.:: :. . ::. . .. .:. ..: .. .: : :.: . :.... ..:
CCDS62 TEISFKLGQEFEETTADNRKTKSIVTLQRGSL-NQVQRWD-GKETTIKRKLVNGKMVAEC
70 80 90 100 110
120 130
pF1KE6 VYEGVEAKRIFKKD
..:: ::..:
CCDS62 KMKGVVCTRIYEKV
120 130
>>CCDS10301.1 CRABP1 gene_id:1381|Hs108|chr15 (137 aa)
initn: 168 init1: 98 opt: 236 Z-score: 338.1 bits: 68.3 E(32554): 1.6e-12
Smith-Waterman score: 236; 31.3% identity (63.4% similar) in 134 aa overlap (3-132:4-137)
10 20 30 40 50
pF1KE6 MAFDSTWKVDRSENYDKFMEKMGVNIVKRKLA--AHDNLKLTITQEGNKFTVKESSAFR
: .:::. :::.:.... .::: . ::.: : .. .. : :.:..: .: :.. :
CCDS10 MPNFAGTWKMRSSENFDELLKALGVNAMLRKVAVAAASKPHVEIRQDGDQFYIKTSTTVR
10 20 30 40 50 60
60 70 80 90 100 110
pF1KE6 NIEVVFELGVTFNYNLADGTELRG--TWSLEGNKLIGKFKRTDNGNELNTVREIIGDELV
. :. :..: :. . .:: . :. :: :.. . .: . .::. .:::.
CCDS10 TTEINFKVGEGFEEETVDGRKCRSLATWENENKIHCTQTLLEGDGPKTYWTRELANDELI
70 80 90 100 110 120
120 130
pF1KE6 QTYVYEGVEAKRIFKKD
:. . : ::. ..
CCDS10 LTFGADDVVCTRIYVRE
130
>>CCDS1152.1 CRABP2 gene_id:1382|Hs108|chr1 (138 aa)
initn: 185 init1: 100 opt: 227 Z-score: 325.6 bits: 66.0 E(32554): 8.1e-12
Smith-Waterman score: 227; 30.9% identity (64.7% similar) in 136 aa overlap (3-132:4-138)
10 20 30 40 50
pF1KE6 MAFDSTWKVDRSENYDKFMEKMGVNIVKRKLAAHDNLK--LTITQEGNKFTVKESSAFR
:...::. ::::...... .:::.. ::.:. : . : :::. : .: :.. :
CCDS11 MPNFSGNWKIIRSENFEELLKVLGVNVMLRKIAVAAASKPAVEIKQEGDTFYIKTSTTVR
10 20 30 40 50 60
60 70 80 90 100 110
pF1KE6 NIEVVFELGVTFNYNLADGTELRGT--WSLEGNKLIGKFKRTDN-GNELNTVREIIGD-E
. :. :..: :. . .:: .. : : ::.. . : . : . . .::. .: :
CCDS11 TTEINFKVGEEFEEQTVDGRPCKSLVKWESE-NKMVCEQKLLKGEGPKTSWTRELTNDGE
70 80 90 100 110
120 130
pF1KE6 LVQTYVYEGVEAKRIFKKD
:. :.. . : :.. ..
CCDS11 LILTMTADDVVCTRVYVRE
120 130
132 residues in 1 query sequences
18511270 residues in 32554 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Tue Nov 8 14:34:39 2016 done: Tue Nov 8 14:34:39 2016
Total Scan time: 1.080 Total Display time: -0.030
Function used was FASTA [36.3.4 Apr, 2011]