Result of FASTA (ccds) for
pFN21AE6580
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KE6580, 131 aa
1>>>pF1KE6580 131 - 131 aa - 131 aa
Library: human.CCDS.faa
18511270 residues in 32554 sequences
Statistics: Expectation_n fit: rho(ln(x))= 5.0797+/-0.000706; mu= 11.9785+/- 0.042
mean_var=59.4277+/-11.880, 0's: 0 Z-trim(108.0): 19 B-trim: 0 in 0/50
Lambda= 0.166372
statistics sampled from 9905 (9914) to 9905 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.701), E-opt: 0.2 (0.305), width: 16
Scan time: 1.300
The best scores are: opt bits E(32554)
CCDS55227.1 ANK1 gene_id:286|Hs108|chr8 ( 156) 788 197.0 3.4e-51
CCDS6122.1 ANK1 gene_id:286|Hs108|chr8 ( 155) 787 196.7 4e-51
CCDS6120.1 ANK1 gene_id:286|Hs108|chr8 ( 109) 654 164.7 1.2e-41
CCDS47849.1 ANK1 gene_id:286|Hs108|chr8 (1897) 384 100.6 4.3e-21
CCDS6119.1 ANK1 gene_id:286|Hs108|chr8 (1881) 325 86.4 7.9e-17
CCDS6121.1 ANK1 gene_id:286|Hs108|chr8 (1880) 324 86.2 9.3e-17
>>CCDS55227.1 ANK1 gene_id:286|Hs108|chr8 (156 aa)
initn: 787 init1: 787 opt: 788 Z-score: 1032.6 bits: 197.0 E(32554): 3.4e-51
Smith-Waterman score: 788; 96.1% identity (96.9% similar) in 129 aa overlap (1-129:1-129)
10 20 30 40 50 60
pF1KE6 MWTFVTQLLVTLVLLSFFLVSCQNVMHIVRGSLCFVLKHIHQELDKELGESEGLSDDEET
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS55 MWTFVTQLLVTLVLLSFFLVSCQNVMHIVRGSLCFVLKHIHQELDKELGESEGLSDDEET
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE6 ISTRVVRRRVFLKGNEFQNIPGEQVTEEQFTDEQGNIVTKKIIRKVVRQIDLSSADAAQE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS55 ISTRVVRRRVFLKGNEFQNIPGEQVTEEQFTDEQGNIVTKKIIRKVVRQIDLSSADAAQE
70 80 90 100 110 120
130
pF1KE6 HEEDHTSTPNP
::: . :
CCDS55 HEEVTVEGPLEDPSELEVDIDYFMKHSKDHTSTPNP
130 140 150
>>CCDS6122.1 ANK1 gene_id:286|Hs108|chr8 (155 aa)
initn: 787 init1: 787 opt: 787 Z-score: 1031.4 bits: 196.7 E(32554): 4e-51
Smith-Waterman score: 787; 100.0% identity (100.0% similar) in 123 aa overlap (1-123:1-123)
10 20 30 40 50 60
pF1KE6 MWTFVTQLLVTLVLLSFFLVSCQNVMHIVRGSLCFVLKHIHQELDKELGESEGLSDDEET
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS61 MWTFVTQLLVTLVLLSFFLVSCQNVMHIVRGSLCFVLKHIHQELDKELGESEGLSDDEET
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE6 ISTRVVRRRVFLKGNEFQNIPGEQVTEEQFTDEQGNIVTKKIIRKVVRQIDLSSADAAQE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS61 ISTRVVRRRVFLKGNEFQNIPGEQVTEEQFTDEQGNIVTKKIIRKVVRQIDLSSADAAQE
70 80 90 100 110 120
130
pF1KE6 HEEDHTSTPNP
:::
CCDS61 HEEVELRGSGLQPDLIEGRKGAQIVKRASLKRGKQ
130 140 150
>>CCDS6120.1 ANK1 gene_id:286|Hs108|chr8 (109 aa)
initn: 654 init1: 654 opt: 654 Z-score: 861.2 bits: 164.7 E(32554): 1.2e-41
Smith-Waterman score: 660; 83.2% identity (83.2% similar) in 131 aa overlap (1-131:1-109)
10 20 30 40 50 60
pF1KE6 MWTFVTQLLVTLVLLSFFLVSCQNVMHIVRGSLCFVLKHIHQELDKELGESEGLSDDEET
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS61 MWTFVTQLLVTLVLLSFFLVSCQNVMHIVRGSLCFVLKHIHQELDKELGESEGLSDDEET
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE6 ISTRVVRRRVFLKGNEFQNIPGEQVTEEQFTDEQGNIVTKKIIRKVVRQIDLSSADAAQE
:::::::::::::::::::::::::::::::::::::::::
CCDS61 ISTRVVRRRVFLKGNEFQNIPGEQVTEEQFTDEQGNIVTKK-------------------
70 80 90 100
130
pF1KE6 HEEDHTSTPNP
::::::::
CCDS61 ---DHTSTPNP
>>CCDS47849.1 ANK1 gene_id:286|Hs108|chr8 (1897 aa)
initn: 380 init1: 380 opt: 384 Z-score: 492.1 bits: 100.6 E(32554): 4.3e-21
Smith-Waterman score: 384; 74.4% identity (87.2% similar) in 86 aa overlap (46-131:1819-1897)
20 30 40 50 60 70
pF1KE6 SFFLVSCQNVMHIVRGSLCFVLKHIHQELDKELGESEGLSDDEETISTRVVRRRVFLKGN
.. :. : ... ..:. :.:: .::
CCDS47 QEYEKVLVSVSEHTWTEQPEAESSQADRDRRQQGQEEQVQEAKNTF-TQVV------QGN
1790 1800 1810 1820 1830 1840
80 90 100 110 120 130
pF1KE6 EFQNIPGEQVTEEQFTDEQGNIVTKKIIRKVVRQIDLSSADAAQEHEEDHTSTPNP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS47 EFQNIPGEQVTEEQFTDEQGNIVTKKIIRKVVRQIDLSSADAAQEHEEDHTSTPNP
1850 1860 1870 1880 1890
>>CCDS6119.1 ANK1 gene_id:286|Hs108|chr8 (1881 aa)
initn: 320 init1: 320 opt: 325 Z-score: 415.6 bits: 86.4 E(32554): 7.9e-17
Smith-Waterman score: 325; 67.9% identity (82.1% similar) in 84 aa overlap (46-129:1778-1854)
20 30 40 50 60 70
pF1KE6 SFFLVSCQNVMHIVRGSLCFVLKHIHQELDKELGESEGLSDDEETISTRVVRRRVFLKGN
.. :. : ... ..:. :.:: .::
CCDS61 QEYEKVLVSVSEHTWTEQPEAESSQADRDRRQQGQEEQVQEAKNTF-TQVV------QGN
1750 1760 1770 1780 1790 1800
80 90 100 110 120 130
pF1KE6 EFQNIPGEQVTEEQFTDEQGNIVTKKIIRKVVRQIDLSSADAAQEHEEDHTSTPNP
:::::::::::::::::::::::::::::::::::::::::::::::: . :
CCDS61 EFQNIPGEQVTEEQFTDEQGNIVTKKIIRKVVRQIDLSSADAAQEHEEVTVEGPLEDPSE
1810 1820 1830 1840 1850 1860
CCDS61 LEVDIDYFMKHSKDHTSTPNP
1870 1880
>>CCDS6121.1 ANK1 gene_id:286|Hs108|chr8 (1880 aa)
initn: 320 init1: 320 opt: 324 Z-score: 414.3 bits: 86.2 E(32554): 9.3e-17
Smith-Waterman score: 324; 71.8% identity (85.9% similar) in 78 aa overlap (46-123:1778-1848)
20 30 40 50 60 70
pF1KE6 SFFLVSCQNVMHIVRGSLCFVLKHIHQELDKELGESEGLSDDEETISTRVVRRRVFLKGN
.. :. : ... ..:. :.:: .::
CCDS61 QEYEKVLVSVSEHTWTEQPEAESSQADRDRRQQGQEEQVQEAKNTF-TQVV------QGN
1750 1760 1770 1780 1790 1800
80 90 100 110 120 130
pF1KE6 EFQNIPGEQVTEEQFTDEQGNIVTKKIIRKVVRQIDLSSADAAQEHEEDHTSTPNP
::::::::::::::::::::::::::::::::::::::::::::::::
CCDS61 EFQNIPGEQVTEEQFTDEQGNIVTKKIIRKVVRQIDLSSADAAQEHEEVELRGSGLQPDL
1810 1820 1830 1840 1850 1860
CCDS61 IEGRKGAQIVKRASLKRGKQ
1870 1880
131 residues in 1 query sequences
18511270 residues in 32554 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Tue Nov 8 14:34:10 2016 done: Tue Nov 8 14:34:11 2016
Total Scan time: 1.300 Total Display time: -0.020
Function used was FASTA [36.3.4 Apr, 2011]