Result of FASTA (ccds) for
pFN21AE6525
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KE6525, 95 aa
1>>>pF1KE6525 95 - 95 aa - 95 aa
Library: human.CCDS.faa
18511270 residues in 32554 sequences
Statistics: Expectation_n fit: rho(ln(x))= 5.2872+/-0.000602; mu= 8.5602+/- 0.036
mean_var=53.1059+/-10.560, 0's: 0 Z-trim(110.4): 10 B-trim: 5 in 1/51
Lambda= 0.175996
statistics sampled from 11571 (11580) to 11571 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.761), E-opt: 0.2 (0.356), width: 16
Scan time: 1.050
The best scores are: opt bits E(32554)
CCDS34549.1 SUMO4 gene_id:387082|Hs108|chr6 ( 95) 632 167.6 1e-42
CCDS45774.1 SUMO2 gene_id:6613|Hs108|chr17 ( 95) 533 142.5 3.7e-35
CCDS33587.1 SUMO3 gene_id:6612|Hs108|chr21 ( 103) 500 134.1 1.3e-32
CCDS45773.1 SUMO2 gene_id:6613|Hs108|chr17 ( 71) 286 79.8 2.1e-16
CCDS68220.1 SUMO3 gene_id:6612|Hs108|chr21 ( 141) 251 70.9 1.9e-13
CCDS2352.1 SUMO1 gene_id:7341|Hs108|chr2 ( 101) 248 70.2 2.4e-13
CCDS46493.1 SUMO1 gene_id:7341|Hs108|chr2 ( 76) 214 61.5 7.3e-11
>>CCDS34549.1 SUMO4 gene_id:387082|Hs108|chr6 (95 aa)
initn: 632 init1: 632 opt: 632 Z-score: 880.5 bits: 167.6 E(32554): 1e-42
Smith-Waterman score: 632; 100.0% identity (100.0% similar) in 95 aa overlap (1-95:1-95)
10 20 30 40 50 60
pF1KE6 MANEKPTEEVKTENNNHINLKVAGQDGSVVQFKIKRQTPLSKLMKAYCEPRGLSVKQIRF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS34 MANEKPTEEVKTENNNHINLKVAGQDGSVVQFKIKRQTPLSKLMKAYCEPRGLSVKQIRF
10 20 30 40 50 60
70 80 90
pF1KE6 RFGGQPISGTDKPAQLEMEDEDTIDVFQQPTGGVY
:::::::::::::::::::::::::::::::::::
CCDS34 RFGGQPISGTDKPAQLEMEDEDTIDVFQQPTGGVY
70 80 90
>>CCDS45774.1 SUMO2 gene_id:6613|Hs108|chr17 (95 aa)
initn: 533 init1: 533 opt: 533 Z-score: 744.7 bits: 142.5 E(32554): 3.7e-35
Smith-Waterman score: 533; 85.3% identity (92.6% similar) in 95 aa overlap (1-95:1-95)
10 20 30 40 50 60
pF1KE6 MANEKPTEEVKTENNNHINLKVAGQDGSVVQFKIKRQTPLSKLMKAYCEPRGLSVKQIRF
::.::: : ::::::.::::::::::::::::::::.:::::::::::: .:::..::::
CCDS45 MADEKPKEGVKTENNDHINLKVAGQDGSVVQFKIKRHTPLSKLMKAYCERQGLSMRQIRF
10 20 30 40 50 60
70 80 90
pF1KE6 RFGGQPISGTDKPAQLEMEDEDTIDVFQQPTGGVY
:: ::::. :: ::::::::::::::::: :::::
CCDS45 RFDGQPINETDTPAQLEMEDEDTIDVFQQQTGGVY
70 80 90
>>CCDS33587.1 SUMO3 gene_id:6612|Hs108|chr21 (103 aa)
initn: 458 init1: 458 opt: 500 Z-score: 698.8 bits: 134.1 E(32554): 1.3e-32
Smith-Waterman score: 500; 83.0% identity (91.5% similar) in 94 aa overlap (1-94:1-93)
10 20 30 40 50 60
pF1KE6 MANEKPTEEVKTENNNHINLKVAGQDGSVVQFKIKRQTPLSKLMKAYCEPRGLSVKQIRF
:..::: : :::::. ::::::::::::::::::::.:::::::::::: .:::..::::
CCDS33 MSEEKPKEGVKTEND-HINLKVAGQDGSVVQFKIKRHTPLSKLMKAYCERQGLSMRQIRF
10 20 30 40 50
70 80 90
pF1KE6 RFGGQPISGTDKPAQLEMEDEDTIDVFQQPTGGVY
:: ::::. :: ::::::::::::::::: ::::
CCDS33 RFDGQPINETDTPAQLEMEDEDTIDVFQQQTGGVPESSLAGHSF
60 70 80 90 100
>>CCDS45773.1 SUMO2 gene_id:6613|Hs108|chr17 (71 aa)
initn: 403 init1: 286 opt: 286 Z-score: 407.8 bits: 79.8 E(32554): 2.1e-16
Smith-Waterman score: 357; 67.4% identity (70.5% similar) in 95 aa overlap (1-95:1-71)
10 20 30 40 50 60
pF1KE6 MANEKPTEEVKTENNNHINLKVAGQDGSVVQFKIKRQTPLSKLMKAYCEPRGLSVKQIRF
::.::: : ::::::.::::::::::::::::::::.::::::::::::
CCDS45 MADEKPKEGVKTENNDHINLKVAGQDGSVVQFKIKRHTPLSKLMKAYCE-----------
10 20 30 40
70 80 90
pF1KE6 RFGGQPISGTDKPAQLEMEDEDTIDVFQQPTGGVY
::::::::::::::: :::::
CCDS45 -------------RQLEMEDEDTIDVFQQQTGGVY
50 60 70
>>CCDS68220.1 SUMO3 gene_id:6612|Hs108|chr21 (141 aa)
initn: 456 init1: 251 opt: 251 Z-score: 354.8 bits: 70.9 E(32554): 1.9e-13
Smith-Waterman score: 406; 59.8% identity (64.6% similar) in 127 aa overlap (6-94:6-131)
10 20 30 40
pF1KE6 MANEKPTEEVKTENNNHINLKVAGQDGSVVQFKIKRQTPLSKLMKAYCE-----------
: : :::::. ::::::::::::::::::::.::::::::::::
CCDS68 MSEEKPKEGVKTEND-HINLKVAGQDGSVVQFKIKRHTPLSKLMKAYCERQVRHLAPPQS
10 20 30 40 50
50 60 70 80
pF1KE6 ---------------------------PRGLSVKQIRFRFGGQPISGTDKPAQLEMEDED
:.:::..:::::: ::::. :: ::::::::::
CCDS68 LPVCALVLCVPGIPRARASRGWTQMQLPEGLSMRQIRFRFDGQPINETDTPAQLEMEDED
60 70 80 90 100 110
90
pF1KE6 TIDVFQQPTGGVY
::::::: ::::
CCDS68 TIDVFQQQTGGVPESSLAGHSF
120 130 140
>>CCDS2352.1 SUMO1 gene_id:7341|Hs108|chr2 (101 aa)
initn: 253 init1: 244 opt: 248 Z-score: 353.1 bits: 70.2 E(32554): 2.4e-13
Smith-Waterman score: 248; 44.0% identity (76.9% similar) in 91 aa overlap (5-93:7-97)
10 20 30 40 50
pF1KE6 MANEKP-TEEV-KTENNNHINLKVAGQDGSVVQFKIKRQTPLSKLMKAYCEPRGLSVK
:: ::.. .....:.::: :::.: ..::.: : :.:: ..::. .:. ..
CCDS23 MSDQEAKPSTEDLGDKKEGEYIKLKVIGQDSSEIHFKVKMTTHLKKLKESYCQRQGVPMN
10 20 30 40 50 60
60 70 80 90
pF1KE6 QIRFRFGGQPISGTDKPAQLEMEDEDTIDVFQQPTGGVY
..:: : :: :. . : .: ::.::.:.:.:. :::
CCDS23 SLRFLFEGQRIADNHTPKELGMEEEDVIEVYQEQTGGHSTV
70 80 90 100
>>CCDS46493.1 SUMO1 gene_id:7341|Hs108|chr2 (76 aa)
initn: 214 init1: 214 opt: 214 Z-score: 308.6 bits: 61.5 E(32554): 7.3e-11
Smith-Waterman score: 214; 43.1% identity (76.4% similar) in 72 aa overlap (22-93:1-72)
10 20 30 40 50 60
pF1KE6 MANEKPTEEVKTENNNHINLKVAGQDGSVVQFKIKRQTPLSKLMKAYCEPRGLSVKQIRF
.. ::.: ..::.: : :.:: ..::. .:. ....::
CCDS46 MSDQDSSEIHFKVKMTTHLKKLKESYCQRQGVPMNSLRF
10 20 30
70 80 90
pF1KE6 RFGGQPISGTDKPAQLEMEDEDTIDVFQQPTGGVY
: :: :. . : .: ::.::.:.:.:. :::
CCDS46 LFEGQRIADNHTPKELGMEEEDVIEVYQEQTGGHSTV
40 50 60 70
95 residues in 1 query sequences
18511270 residues in 32554 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Tue Nov 8 14:06:02 2016 done: Tue Nov 8 14:06:02 2016
Total Scan time: 1.050 Total Display time: -0.020
Function used was FASTA [36.3.4 Apr, 2011]