FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448

Query: pF1KE6522, 85 aa
  1>>>pF1KE6522 85 - 85 aa - 85 aa
Library: /omim/omim.rfq.tfa
  60827320 residues in 85289 sequences

Statistics:  Expectation_n fit: rho(ln(x))= 5.1012+/-0.000265; mu= 8.4061+/- 0.017
 mean_var=48.6880+/- 9.863, 0's: 0 Z-trim(118.7): 15  B-trim: 120 in 1/50
 Lambda= 0.183807
 statistics sampled from 32009 (32024) to 32009 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
 ktup: 2, E-join: 1 (0.779), E-opt: 0.2 (0.375), width:  16
 Scan time:  3.870

The best scores are:                                      opt bits E(85289)
NP_055029 (OMIM: 605922) inositol monophosphatase  ( 288)  490 136.9 1.3e-32
NP_001138351 (OMIM: 602064) inositol monophosphata ( 198)  208 62.1   3e-10
NP_005527 (OMIM: 602064) inositol monophosphatase  ( 277)  208 62.1 4.1e-10
NP_001138350 (OMIM: 602064) inositol monophosphata ( 336)  208 62.1 4.9e-10


>>NP_055029 (OMIM: 605922) inositol monophosphatase 2 [H  (288 aa)
 initn: 490 init1: 490 opt: 490  Z-score: 706.4  bits: 136.9 E(85289): 1.3e-32
Smith-Waterman score: 490; 100.0% identity (100.0% similar) in 77 aa overlap (1-77:1-77)

               10        20        30        40        50        60
pF1KE6 MKPSGEDQAALAAGPWEECFQAAVQLALRAGQIIRKALTEEKRVSTKTSAADLVTETDHL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_055 MKPSGEDQAALAAGPWEECFQAAVQLALRAGQIIRKALTEEKRVSTKTSAADLVTETDHL
               10        20        30        40        50        60

               70        80                                        
pF1KE6 VEDLIISELRERFPSHRSPFSLVHM                                   
       :::::::::::::::::                                           
NP_055 VEDLIISELRERFPSHRFIAEEAAASGAKCVLTHSPTWIIDPIDGTCNFVHRFPTVAVSI
               70        80        90       100       110       120

>>NP_001138351 (OMIM: 602064) inositol monophosphatase 1  (198 aa)
 initn: 228 init1: 208 opt: 208  Z-score: 305.0  bits: 62.1 E(85289): 3e-10
Smith-Waterman score: 208; 46.9% identity (76.6% similar) in 64 aa overlap (13-76:2-65)

               10        20        30        40        50        60
pF1KE6 MKPSGEDQAALAAGPWEECFQAAVQLALRAGQIIRKALTEEKRVSTKTSAADLVTETDHL
                   : ::.::.. :: :: .::... .:. .:  :  :.: .:::: ::. 
NP_001            MADPWQECMDYAVTLARQAGEVVCEAIKNEMNVMLKSSPVDLVTATDQK
                          10        20        30        40         

               70        80                                        
pF1KE6 VEDLIISELRERFPSHRSPFSLVHM                                   
       :: ..:: ..:..:::                                            
NP_001 VEKMLISSIKEKYPSHSFIGEESVAAGEKSILTDNPTWIIDPIDGTTNFVHRFPFVAVSI
      50        60        70        80        90       100         

>>NP_005527 (OMIM: 602064) inositol monophosphatase 1 is  (277 aa)
 initn: 228 init1: 208 opt: 208  Z-score: 302.6  bits: 62.1 E(85289): 4.1e-10
Smith-Waterman score: 208; 46.9% identity (76.6% similar) in 64 aa overlap (13-76:2-65)

               10        20        30        40        50        60
pF1KE6 MKPSGEDQAALAAGPWEECFQAAVQLALRAGQIIRKALTEEKRVSTKTSAADLVTETDHL
                   : ::.::.. :: :: .::... .:. .:  :  :.: .:::: ::. 
NP_005            MADPWQECMDYAVTLARQAGEVVCEAIKNEMNVMLKSSPVDLVTATDQK
                          10        20        30        40         

               70        80                                        
pF1KE6 VEDLIISELRERFPSHRSPFSLVHM                                   
       :: ..:: ..:..:::                                            
NP_005 VEKMLISSIKEKYPSHSFIGEESVAAGEKSILTDNPTWIIDPIDGTTNFVHRFPFVAVSI
      50        60        70        80        90       100         

>>NP_001138350 (OMIM: 602064) inositol monophosphatase 1  (336 aa)
 initn: 228 init1: 208 opt: 208  Z-score: 301.2  bits: 62.1 E(85289): 4.9e-10
Smith-Waterman score: 208; 46.9% identity (76.6% similar) in 64 aa overlap (13-76:61-124)

                                 10        20        30        40  
pF1KE6                   MKPSGEDQAALAAGPWEECFQAAVQLALRAGQIIRKALTEEK
                                     : ::.::.. :: :: .::... .:. .: 
NP_001 AVTRTETAGNSSGVYGFGKMKIFVKYFQKMADPWQECMDYAVTLARQAGEVVCEAIKNEM
               40        50        60        70        80        90

             50        60        70        80                      
pF1KE6 RVSTKTSAADLVTETDHLVEDLIISELRERFPSHRSPFSLVHM                 
        :  :.: .:::: ::. :: ..:: ..:..:::                          
NP_001 NVMLKSSPVDLVTATDQKVEKMLISSIKEKYPSHSFIGEESVAAGEKSILTDNPTWIIDP
              100       110       120       130       140       150

NP_001 IDGTTNFVHRFPFVAVSIGFAVNKKIEFGVVYSCVEGKMYTARKGKGAFCNGQKLQVSQQ
              160       170       180       190       200       210




85 residues in 1 query   sequences
60827320 residues in 85289 library sequences
 Tcomplib [36.3.4 Apr, 2011] (8 proc)
 start: Tue Nov  8 14:04:20 2016 done: Tue Nov  8 14:04:20 2016
 Total Scan time:  3.870 Total Display time: -0.040

Function used was FASTA [36.3.4 Apr, 2011]