Result of FASTA (ccds) for
pFN21AE6495
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KE6495, 458 aa
1>>>pF1KE6495 458 - 458 aa - 458 aa
Library: human.CCDS.faa
18511270 residues in 32554 sequences
Statistics: Expectation_n fit: rho(ln(x))= 5.4339+/-0.000741; mu= 17.0091+/- 0.045
mean_var=68.3787+/-13.794, 0's: 0 Z-trim(109.3): 84 B-trim: 594 in 1/49
Lambda= 0.155101
statistics sampled from 10732 (10820) to 10732 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.698), E-opt: 0.2 (0.332), width: 16
Scan time: 2.630
The best scores are: opt bits E(32554)
CCDS45281.1 KBTBD13 gene_id:390594|Hs108|chr15 ( 458) 3111 705.0 4.1e-203
CCDS6503.1 KLHL9 gene_id:55958|Hs108|chr9 ( 617) 335 83.9 5.2e-16
CCDS34478.1 KLHL31 gene_id:401265|Hs108|chr6 ( 634) 316 79.6 1e-14
CCDS55479.1 KLHL13 gene_id:90293|Hs108|chrX ( 613) 313 78.9 1.6e-14
CCDS55481.1 KLHL13 gene_id:90293|Hs108|chrX ( 639) 313 79.0 1.6e-14
CCDS14571.1 KLHL13 gene_id:90293|Hs108|chrX ( 655) 313 79.0 1.7e-14
CCDS55480.1 KLHL13 gene_id:90293|Hs108|chrX ( 658) 313 79.0 1.7e-14
CCDS54756.1 KLHL5 gene_id:51088|Hs108|chr4 ( 568) 310 78.3 2.3e-14
CCDS3449.1 KLHL5 gene_id:51088|Hs108|chr4 ( 694) 310 78.3 2.8e-14
CCDS33975.1 KLHL5 gene_id:51088|Hs108|chr4 ( 709) 310 78.3 2.8e-14
CCDS33974.1 KLHL5 gene_id:51088|Hs108|chr4 ( 755) 310 78.3 3e-14
CCDS185.2 KLHDC7A gene_id:127707|Hs108|chr1 ( 777) 309 78.1 3.6e-14
CCDS14097.2 KLHDC7B gene_id:113730|Hs108|chr22 ( 594) 289 73.6 6.3e-13
CCDS34795.1 KBTBD11 gene_id:9920|Hs108|chr8 ( 623) 280 71.6 2.7e-12
CCDS10948.1 KLHL36 gene_id:79786|Hs108|chr16 ( 616) 273 70.0 7.8e-12
CCDS1368.1 IVNS1ABP gene_id:10625|Hs108|chr1 ( 642) 267 68.7 2e-11
CCDS75163.1 KLHL8 gene_id:57563|Hs108|chr4 ( 437) 261 67.2 3.7e-11
CCDS73582.1 KLHL1 gene_id:57626|Hs108|chr13 ( 687) 263 67.8 4e-11
CCDS9445.1 KLHL1 gene_id:57626|Hs108|chr13 ( 748) 263 67.8 4.3e-11
CCDS77937.1 KLHL8 gene_id:57563|Hs108|chr4 ( 544) 261 67.3 4.5e-11
CCDS3617.1 KLHL8 gene_id:57563|Hs108|chr4 ( 620) 261 67.3 5e-11
CCDS30550.1 KLHL17 gene_id:339451|Hs108|chr1 ( 642) 261 67.3 5.2e-11
CCDS32813.1 KLHL14 gene_id:57565|Hs108|chr18 ( 628) 260 67.1 5.9e-11
CCDS13780.1 KLHL22 gene_id:84861|Hs108|chr22 ( 634) 259 66.9 7e-11
>>CCDS45281.1 KBTBD13 gene_id:390594|Hs108|chr15 (458 aa)
initn: 3111 init1: 3111 opt: 3111 Z-score: 3759.9 bits: 705.0 E(32554): 4.1e-203
Smith-Waterman score: 3111; 99.8% identity (100.0% similar) in 458 aa overlap (1-458:1-458)
10 20 30 40 50 60
pF1KE6 MARGPQTLVQVWVGGQLFQADRALLVEHCGFFRGLFRSGMRETRAAEVRLGVLSAGGFRA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS45 MARGPQTLVQVWVGGQLFQADRALLVEHCGFFRGLFRSGMRETRAAEVRLGVLSAGGFRA
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE6 TLQVLRGDRPALAAEDELLQVVECAAFLQAPALARFLEHNLTSDNCALLCDAAAAFGLRD
::::::::::::::::::::.:::::::::::::::::::::::::::::::::::::::
CCDS45 TLQVLRGDRPALAAEDELLQAVECAAFLQAPALARFLEHNLTSDNCALLCDAAAAFGLRD
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE6 VFHSAALFICDGERELAAELALPEARAYVAALRPSSYAAVSTHTPAPGFLEDASRTLCYL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS45 VFHSAALFICDGERELAAELALPEARAYVAALRPSSYAAVSTHTPAPGFLEDASRTLCYL
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE6 DEEEDAWRTLAALPLEASTLLAGVATLGNKLYIVGGVRGASKEVVELGFCYDPDGGTWHE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS45 DEEEDAWRTLAALPLEASTLLAGVATLGNKLYIVGGVRGASKEVVELGFCYDPDGGTWHE
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE6 FPSPHQPRYDTALAGFDGRLYAIGGEFQRTPISSVERYDPAAGCWSFVADLPQPAAGVPC
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS45 FPSPHQPRYDTALAGFDGRLYAIGGEFQRTPISSVERYDPAAGCWSFVADLPQPAAGVPC
250 260 270 280 290 300
310 320 330 340 350 360
pF1KE6 AQACGRLFVCLWRPADTTAVVEYAVRTDAWLPVAELRRPQSYGHCMVAHRDSLYVVRNGP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS45 AQACGRLFVCLWRPADTTAVVEYAVRTDAWLPVAELRRPQSYGHCMVAHRDSLYVVRNGP
310 320 330 340 350 360
370 380 390 400 410 420
pF1KE6 SDDFLHCAIDCLNLATGQWTALPGQFVNSKGALFTAVVRGDTVYTVNRMFTLLYAIEGGT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS45 SDDFLHCAIDCLNLATGQWTALPGQFVNSKGALFTAVVRGDTVYTVNRMFTLLYAIEGGT
370 380 390 400 410 420
430 440 450
pF1KE6 WRLLREKAGFPRPGSLQTFLLRLPPGAPGPVTSTTAEL
::::::::::::::::::::::::::::::::::::::
CCDS45 WRLLREKAGFPRPGSLQTFLLRLPPGAPGPVTSTTAEL
430 440 450
>>CCDS6503.1 KLHL9 gene_id:55958|Hs108|chr9 (617 aa)
initn: 324 init1: 153 opt: 335 Z-score: 400.9 bits: 83.9 E(32554): 5.2e-16
Smith-Waterman score: 339; 28.3% identity (53.1% similar) in 339 aa overlap (148-456:281-612)
120 130 140 150 160 170
pF1KE6 LRDVFHSAALFICDGERELAAELALPEARAYVAALRPSSYAAV---STH-TPAPGFLED-
:. . :. .:. ::: . : :..
CCDS65 INYVQTVDFMRTDNTCVNLLLEASNYQMMPYMQPVMQSDRTAIRSDSTHLVTLGGVLRQQ
260 270 280 290 300 310
180 190 200 210 220
pF1KE6 --ASRTLCYLDEEEDAWRTLAALPLEASTLLAGVATLGNKLYIVGGVRG---ASKEVVEL
.:. : . ::. . ::.:: :..: :.:..:: ::.::: . .: .:.
CCDS65 LVVSKELRMYDERAQEWRSLA--PMDAPRYQHGIAVIGNFLYVVGGQSNYDTKGKTAVDT
320 330 340 350 360
230 240 250 260 270 280
pF1KE6 GFCYDPDGGTWHEFPSPHQPRYDTALAGFDGRLYAIGGEFQRTPISSVERYDPAAGCWSF
: .:: . : . : .. : :... :.:::.::. ...:: :.: . ::.
CCDS65 VFRFDPRYNKWMQVASLNEKRTFFHLSALKGHLYAVGGRSAAGELATVECYNPRMNEWSY
370 380 390 400 410 420
290 300 310 320 330 340
pF1KE6 VADLPQPAAGVPCAQACGRLFVCLWRPADT--TAVVEYAVRTDAWLPVAELRRPQSYGHC
:: . .: : . : ... :: . .. . :: :. : . .. ::
CCDS65 VAKMSEPHYGHAGTVYGGLMYISGGITHDTFQNELMCFDPDTDKWMQKAPMTTVRGL-HC
430 440 450 460 470 480
350 360 370 380 390
pF1KE6 MVAHRDSLYVVRN----GPSD--DFLHCAIDCLNLATGQWTALPGQFVNSKGALFTAVVR
: . :.:::. . : :: : : : .: ::: . ... ... . .:: .
CCDS65 MCTVGDKLYVIGGNHFRGTSDYDDVLSCEYYSPTL--DQWTPIAAML-RGQSDVGVAVFE
490 500 510 520 530 540
400 410 420 430 440
pF1KE6 GDTVYTV------NR-MFTLL--YAIEGGTWRL---LREKAGFPRPGSLQTFLLRLPPGA
. .:.: :: : .. : : :. : :. : : .: .: . ::.
CCDS65 -NKIYVVGGYSWNNRCMVEIVQKYDPEKDEWHKVFDLPESLGGIRACTLTVFPPEENPGS
550 560 570 580 590 600
450
pF1KE6 PGPVTSTTAEL
:. . .:
CCDS65 PSRESPLSAPSDHS
610
>>CCDS34478.1 KLHL31 gene_id:401265|Hs108|chr6 (634 aa)
initn: 250 init1: 124 opt: 316 Z-score: 377.8 bits: 79.6 E(32554): 1e-14
Smith-Waterman score: 316; 30.8% identity (57.1% similar) in 247 aa overlap (167-391:325-559)
140 150 160 170 180 190
pF1KE6 AAELALPEARAYVAALRPSSYAAVSTHTPAPGFLEDA-SRTLCYLDEEEDAWRTLAALPL
::. : . :: . : : : ..: :. .:
CCDS34 HLLPYHQNTLQSRRTRIRGGCRVLVTVGGRPGLTEKSLSRDILYRDPE-NGWSKLTEMP-
300 310 320 330 340 350
200 210 220 230 240
pF1KE6 EASTLLAGVATLGNKLYIVGG-----VRGASKEVVELGFC-YDPDGGTWHEFPSPHQPRY
:... ::.. . ::..:: .:. .:..: .:: ::: .:: .. : .: :
CCDS34 -AKSFNQCVAVMDGFLYVAGGEDQNDARNQAKHAVS-NFCRYDPRFNTWIHLASMNQKRT
360 370 380 390 400 410
250 260 270 280 290 300
pF1KE6 DTALAGFDGRLYAIGGEFQRTPISSVERYDPAAGCWSFVADLPQPAAGVPCAQAC-----
.:. :.: .:: ::. . ..:.: : :... : :: . . :. :
CCDS34 HFSLSVFNGLVYAAGGRNAEGSLASLECYVPSTNQW-------QPKTPLEVARCCHASAV
420 430 440 450 460
310 320 330 340 350
pF1KE6 --GRLFVCLWRPAD--TTAVVEYAVRTDAWLPVAELRRPQSYGHCMVAHRDSLYVVRN--
::..: :. . .: : .:.: . .: :... :: :. : .::. .
CCDS34 ADGRVLVTGGYIANAYSRSVCAYDPASDSWQELPNLSTPRGW-HCAVTLSDRVYVMGGSQ
470 480 490 500 510 520
360 370 380 390 400 410
pF1KE6 -GPSDDFLHC-AIDCLNLATGQWT-ALPGQF-VNSKGALFTAVVRGDTVYTVNRMFTLLY
:: . . ...: . :::::. : : : :.. :
CCDS34 LGPRGERVDVLTVECYSPATGQWSYAAPLQVGVSTAGVSALHGRAYLVGGWNEGEKKYKK
530 540 550 560 570 580
420 430 440 450
pF1KE6 AIEGGTWRLLREKAGFPRPGSLQTFLLRLPPGAPGPVTSTTAEL
CCDS34 CIQCFSPELNEWTEDDELPEATVGVSCCTLSMPNNVTRESRASSVSSVPVSI
590 600 610 620 630
>>CCDS55479.1 KLHL13 gene_id:90293|Hs108|chrX (613 aa)
initn: 289 init1: 147 opt: 313 Z-score: 374.4 bits: 78.9 E(32554): 1.6e-14
Smith-Waterman score: 313; 27.4% identity (51.7% similar) in 259 aa overlap (174-421:314-555)
150 160 170 180 190 200
pF1KE6 EARAYVAALRPSSYAAVSTHTPAPGFLEDASRTLCYLDEEEDAWRTLAALPLEASTLLAG
:. : . ::. :..:: :..: :
CCDS55 PVMQSDRTAIRSDTTHLVTLGGVLRQQLVVSKELRMYDEKAHEWKSLA--PMDAPRYQHG
290 300 310 320 330 340
210 220 230 240 250 260
pF1KE6 VATLGNKLYIVGGVRG---ASKEVVELGFCYDPDGGTWHEFPSPHQPRYDTALAGFDGRL
.:..:: ::.::: . .: .:. : .:: . : . : .. : :... : :
CCDS55 IAVIGNFLYVVGGQSNYDTKGKTAVDTVFRFDPRYNKWMQVASLNEKRTFFHLSALKGYL
350 360 370 380 390 400
270 280 290 300 310
pF1KE6 YAIGGEFQRTPISSVERYDPAAGCWSFVADLPQPAAGVPCAQACGRLFVCLWRPADT--T
::.::. . .:: :.: .. :..:: . .: : . : ... ::
CCDS55 YAVGGRNAAGELPTVECYNPRTNEWTYVAKMSEPHYGHAGTVYGGVMYISGGITHDTFQK
410 420 430 440 450 460
320 330 340 350 360 370
pF1KE6 AVVEYAVRTDAWLPVAELRRPQSYGHCMVAHRDSLYVVRN----GPSD--DFLHCAIDCL
.. . :: :. : . .. ::: . . :::. . : :: : : : .
CCDS55 ELMCFDPDTDKWIQKAPMTTVRGL-HCMCTVGERLYVIGGNHFRGTSDYDDVLSC--EYY
470 480 490 500 510
380 390 400 410 420 430
pF1KE6 NLATGQWTALPGQFVNSKGALFTAVVRGDTVYTVNRMFTLLYAIEGGTWRLLREKAGFPR
. ::: . .:..::.. : . . .:.. : .:
CCDS55 SPILDQWTPI------------AAMLRGQSDVGVAVFENKIYVVGGYSWNNRCMVEIVQK
520 530 540 550 560
440 450
pF1KE6 PGSLQTFLLRLPPGAPGPVTSTTAEL
CCDS55 YDPDKDEWHKVFDLPESLGGIRACTLTVFPPEETTPSPSRESPLSAP
570 580 590 600 610
>>CCDS55481.1 KLHL13 gene_id:90293|Hs108|chrX (639 aa)
initn: 289 init1: 147 opt: 313 Z-score: 374.1 bits: 79.0 E(32554): 1.6e-14
Smith-Waterman score: 313; 27.4% identity (51.7% similar) in 259 aa overlap (174-421:340-581)
150 160 170 180 190 200
pF1KE6 EARAYVAALRPSSYAAVSTHTPAPGFLEDASRTLCYLDEEEDAWRTLAALPLEASTLLAG
:. : . ::. :..:: :..: :
CCDS55 PVMQSDRTAIRSDTTHLVTLGGVLRQQLVVSKELRMYDEKAHEWKSLA--PMDAPRYQHG
310 320 330 340 350 360
210 220 230 240 250 260
pF1KE6 VATLGNKLYIVGGVRG---ASKEVVELGFCYDPDGGTWHEFPSPHQPRYDTALAGFDGRL
.:..:: ::.::: . .: .:. : .:: . : . : .. : :... : :
CCDS55 IAVIGNFLYVVGGQSNYDTKGKTAVDTVFRFDPRYNKWMQVASLNEKRTFFHLSALKGYL
370 380 390 400 410 420
270 280 290 300 310
pF1KE6 YAIGGEFQRTPISSVERYDPAAGCWSFVADLPQPAAGVPCAQACGRLFVCLWRPADT--T
::.::. . .:: :.: .. :..:: . .: : . : ... ::
CCDS55 YAVGGRNAAGELPTVECYNPRTNEWTYVAKMSEPHYGHAGTVYGGVMYISGGITHDTFQK
430 440 450 460 470 480
320 330 340 350 360 370
pF1KE6 AVVEYAVRTDAWLPVAELRRPQSYGHCMVAHRDSLYVVRN----GPSD--DFLHCAIDCL
.. . :: :. : . .. ::: . . :::. . : :: : : : .
CCDS55 ELMCFDPDTDKWIQKAPMTTVRGL-HCMCTVGERLYVIGGNHFRGTSDYDDVLSC--EYY
490 500 510 520 530 540
380 390 400 410 420 430
pF1KE6 NLATGQWTALPGQFVNSKGALFTAVVRGDTVYTVNRMFTLLYAIEGGTWRLLREKAGFPR
. ::: . .:..::.. : . . .:.. : .:
CCDS55 SPILDQWTPI------------AAMLRGQSDVGVAVFENKIYVVGGYSWNNRCMVEIVQK
550 560 570 580 590
440 450
pF1KE6 PGSLQTFLLRLPPGAPGPVTSTTAEL
CCDS55 YDPDKDEWHKVFDLPESLGGIRACTLTVFPPEETTPSPSRESPLSAP
600 610 620 630
>>CCDS14571.1 KLHL13 gene_id:90293|Hs108|chrX (655 aa)
initn: 289 init1: 147 opt: 313 Z-score: 373.9 bits: 79.0 E(32554): 1.7e-14
Smith-Waterman score: 313; 27.4% identity (51.7% similar) in 259 aa overlap (174-421:356-597)
150 160 170 180 190 200
pF1KE6 EARAYVAALRPSSYAAVSTHTPAPGFLEDASRTLCYLDEEEDAWRTLAALPLEASTLLAG
:. : . ::. :..:: :..: :
CCDS14 PVMQSDRTAIRSDTTHLVTLGGVLRQQLVVSKELRMYDEKAHEWKSLA--PMDAPRYQHG
330 340 350 360 370 380
210 220 230 240 250 260
pF1KE6 VATLGNKLYIVGGVRG---ASKEVVELGFCYDPDGGTWHEFPSPHQPRYDTALAGFDGRL
.:..:: ::.::: . .: .:. : .:: . : . : .. : :... : :
CCDS14 IAVIGNFLYVVGGQSNYDTKGKTAVDTVFRFDPRYNKWMQVASLNEKRTFFHLSALKGYL
390 400 410 420 430 440
270 280 290 300 310
pF1KE6 YAIGGEFQRTPISSVERYDPAAGCWSFVADLPQPAAGVPCAQACGRLFVCLWRPADT--T
::.::. . .:: :.: .. :..:: . .: : . : ... ::
CCDS14 YAVGGRNAAGELPTVECYNPRTNEWTYVAKMSEPHYGHAGTVYGGVMYISGGITHDTFQK
450 460 470 480 490 500
320 330 340 350 360 370
pF1KE6 AVVEYAVRTDAWLPVAELRRPQSYGHCMVAHRDSLYVVRN----GPSD--DFLHCAIDCL
.. . :: :. : . .. ::: . . :::. . : :: : : : .
CCDS14 ELMCFDPDTDKWIQKAPMTTVRGL-HCMCTVGERLYVIGGNHFRGTSDYDDVLSC--EYY
510 520 530 540 550 560
380 390 400 410 420 430
pF1KE6 NLATGQWTALPGQFVNSKGALFTAVVRGDTVYTVNRMFTLLYAIEGGTWRLLREKAGFPR
. ::: . .:..::.. : . . .:.. : .:
CCDS14 SPILDQWTPI------------AAMLRGQSDVGVAVFENKIYVVGGYSWNNRCMVEIVQK
570 580 590 600
440 450
pF1KE6 PGSLQTFLLRLPPGAPGPVTSTTAEL
CCDS14 YDPDKDEWHKVFDLPESLGGIRACTLTVFPPEETTPSPSRESPLSAP
610 620 630 640 650
>>CCDS55480.1 KLHL13 gene_id:90293|Hs108|chrX (658 aa)
initn: 289 init1: 147 opt: 313 Z-score: 373.9 bits: 79.0 E(32554): 1.7e-14
Smith-Waterman score: 313; 27.4% identity (51.7% similar) in 259 aa overlap (174-421:359-600)
150 160 170 180 190 200
pF1KE6 EARAYVAALRPSSYAAVSTHTPAPGFLEDASRTLCYLDEEEDAWRTLAALPLEASTLLAG
:. : . ::. :..:: :..: :
CCDS55 PVMQSDRTAIRSDTTHLVTLGGVLRQQLVVSKELRMYDEKAHEWKSLA--PMDAPRYQHG
330 340 350 360 370 380
210 220 230 240 250 260
pF1KE6 VATLGNKLYIVGGVRG---ASKEVVELGFCYDPDGGTWHEFPSPHQPRYDTALAGFDGRL
.:..:: ::.::: . .: .:. : .:: . : . : .. : :... : :
CCDS55 IAVIGNFLYVVGGQSNYDTKGKTAVDTVFRFDPRYNKWMQVASLNEKRTFFHLSALKGYL
390 400 410 420 430 440
270 280 290 300 310
pF1KE6 YAIGGEFQRTPISSVERYDPAAGCWSFVADLPQPAAGVPCAQACGRLFVCLWRPADT--T
::.::. . .:: :.: .. :..:: . .: : . : ... ::
CCDS55 YAVGGRNAAGELPTVECYNPRTNEWTYVAKMSEPHYGHAGTVYGGVMYISGGITHDTFQK
450 460 470 480 490 500
320 330 340 350 360 370
pF1KE6 AVVEYAVRTDAWLPVAELRRPQSYGHCMVAHRDSLYVVRN----GPSD--DFLHCAIDCL
.. . :: :. : . .. ::: . . :::. . : :: : : : .
CCDS55 ELMCFDPDTDKWIQKAPMTTVRGL-HCMCTVGERLYVIGGNHFRGTSDYDDVLSC--EYY
510 520 530 540 550 560
380 390 400 410 420 430
pF1KE6 NLATGQWTALPGQFVNSKGALFTAVVRGDTVYTVNRMFTLLYAIEGGTWRLLREKAGFPR
. ::: . .:..::.. : . . .:.. : .:
CCDS55 SPILDQWTPI------------AAMLRGQSDVGVAVFENKIYVVGGYSWNNRCMVEIVQK
570 580 590 600 610
440 450
pF1KE6 PGSLQTFLLRLPPGAPGPVTSTTAEL
CCDS55 YDPDKDEWHKVFDLPESLGGIRACTLTVFPPEETTPSPSRESPLSAP
620 630 640 650
>>CCDS54756.1 KLHL5 gene_id:51088|Hs108|chr4 (568 aa)
initn: 230 init1: 177 opt: 310 Z-score: 371.2 bits: 78.3 E(32554): 2.3e-14
Smith-Waterman score: 310; 26.5% identity (57.1% similar) in 275 aa overlap (142-406:260-526)
120 130 140 150 160 170
pF1KE6 AAAAFGLRDVFHSAALFICDGERELAAELALPEARAYVAALRPSSYAAVSTHTPAPGFLE
::: : .. . : . .. : : ..
CCDS54 QFLADMENNVLFRDDIECQKLIMEAMKYHLLPERRPMLQSPRTKPRKSTVGTLFAVGGMD
230 240 250 260 270 280
180 190 200 210 220
pF1KE6 DA--SRTLCYLDEEEDAWRTLAALPLEASTLLAGVATLGNKLYIVGGVRG-ASKEVVELG
.. . .. : . . : .: ... : :::.: .:::.::: : . ..::
CCDS54 STKGATSIEKYDLRTNMWTPVAN--MNGRRLQFGVAVLDDKLYVVGGRDGLKTLNTVE--
290 300 310 320 330 340
230 240 250 260 270 280
pF1KE6 FCYDPDGGTWHEFPSPHQPRYDTALAGFDGRLYAIGGEFQRTPISSVERYDPAAGCWSFV
::.: :: .: :. ..: ..: .::.::. . ...:::.:: : :.::
CCDS54 -CYNPKTKTWSVMPPMSTHRHGLGVAVLEGPMYAVGGHDGWSYLNTVERWDPQARQWNFV
350 360 370 380 390 400
290 300 310 320 330 340
pF1KE6 ADLPQPAAGVPCAQACGRLFVCLWRPADTT--AVVEYAVRTDAWLPVAELRRPQSYGHCM
: . : . : : :.:.. : ... .: . .:. : :.. . .. : .
CCDS54 ATMSTPRSTVGVAVLSGKLYAVGGRDGSSCLKSVECFDPHTNKWTLCAQMSKRRG-GVGV
410 420 430 440 450 460
350 360 370 380 390 400
pF1KE6 VAHRDSLYVV--RNGPSDDFLHCAIDCL---NLATGQWTALPGQFVNSKGALFTAVVRGD
.. ::.. ...:.... ::. . : .:::. .. . :. :. . .. ::
CCDS54 TTWNGLLYAIGGHDAPASNLTSRLSDCVERYDPKTDMWTAVASMSI-SRDAVGVCLL-GD
470 480 490 500 510 520
410 420 430 440 450
pF1KE6 TVYTVNRMFTLLYAIEGGTWRLLREKAGFPRPGSLQTFLLRLPPGAPGPVTSTTAEL
.:.:
CCDS54 KLYAVGGYDGQAYLNTVEAYDPQTNEWTQVAPLCLGRAGACVVTVKL
530 540 550 560
>>CCDS3449.1 KLHL5 gene_id:51088|Hs108|chr4 (694 aa)
initn: 230 init1: 177 opt: 310 Z-score: 369.9 bits: 78.3 E(32554): 2.8e-14
Smith-Waterman score: 310; 26.5% identity (57.1% similar) in 275 aa overlap (142-406:386-652)
120 130 140 150 160 170
pF1KE6 AAAAFGLRDVFHSAALFICDGERELAAELALPEARAYVAALRPSSYAAVSTHTPAPGFLE
::: : .. . : . .. : : ..
CCDS34 QFLADMENNVLFRDDIECQKLIMEAMKYHLLPERRPMLQSPRTKPRKSTVGTLFAVGGMD
360 370 380 390 400 410
180 190 200 210 220
pF1KE6 DA--SRTLCYLDEEEDAWRTLAALPLEASTLLAGVATLGNKLYIVGGVRG-ASKEVVELG
.. . .. : . . : .: ... : :::.: .:::.::: : . ..::
CCDS34 STKGATSIEKYDLRTNMWTPVAN--MNGRRLQFGVAVLDDKLYVVGGRDGLKTLNTVE--
420 430 440 450 460 470
230 240 250 260 270 280
pF1KE6 FCYDPDGGTWHEFPSPHQPRYDTALAGFDGRLYAIGGEFQRTPISSVERYDPAAGCWSFV
::.: :: .: :. ..: ..: .::.::. . ...:::.:: : :.::
CCDS34 -CYNPKTKTWSVMPPMSTHRHGLGVAVLEGPMYAVGGHDGWSYLNTVERWDPQARQWNFV
480 490 500 510 520 530
290 300 310 320 330 340
pF1KE6 ADLPQPAAGVPCAQACGRLFVCLWRPADTT--AVVEYAVRTDAWLPVAELRRPQSYGHCM
: . : . : : :.:.. : ... .: . .:. : :.. . .. : .
CCDS34 ATMSTPRSTVGVAVLSGKLYAVGGRDGSSCLKSVECFDPHTNKWTLCAQMSKRRG-GVGV
540 550 560 570 580
350 360 370 380 390 400
pF1KE6 VAHRDSLYVV--RNGPSDDFLHCAIDCL---NLATGQWTALPGQFVNSKGALFTAVVRGD
.. ::.. ...:.... ::. . : .:::. .. . :. :. . .. ::
CCDS34 TTWNGLLYAIGGHDAPASNLTSRLSDCVERYDPKTDMWTAVASMSI-SRDAVGVCLL-GD
590 600 610 620 630 640
410 420 430 440 450
pF1KE6 TVYTVNRMFTLLYAIEGGTWRLLREKAGFPRPGSLQTFLLRLPPGAPGPVTSTTAEL
.:.:
CCDS34 KLYAVGGYDGQAYLNTVEAYDPQTNEWTQVAPLCLGRAGACVVTVKL
650 660 670 680 690
>>CCDS33975.1 KLHL5 gene_id:51088|Hs108|chr4 (709 aa)
initn: 230 init1: 177 opt: 310 Z-score: 369.8 bits: 78.3 E(32554): 2.8e-14
Smith-Waterman score: 310; 26.5% identity (57.1% similar) in 275 aa overlap (142-406:401-667)
120 130 140 150 160 170
pF1KE6 AAAAFGLRDVFHSAALFICDGERELAAELALPEARAYVAALRPSSYAAVSTHTPAPGFLE
::: : .. . : . .. : : ..
CCDS33 QFLADMENNVLFRDDIECQKLIMEAMKYHLLPERRPMLQSPRTKPRKSTVGTLFAVGGMD
380 390 400 410 420 430
180 190 200 210 220
pF1KE6 DA--SRTLCYLDEEEDAWRTLAALPLEASTLLAGVATLGNKLYIVGGVRG-ASKEVVELG
.. . .. : . . : .: ... : :::.: .:::.::: : . ..::
CCDS33 STKGATSIEKYDLRTNMWTPVAN--MNGRRLQFGVAVLDDKLYVVGGRDGLKTLNTVE--
440 450 460 470 480
230 240 250 260 270 280
pF1KE6 FCYDPDGGTWHEFPSPHQPRYDTALAGFDGRLYAIGGEFQRTPISSVERYDPAAGCWSFV
::.: :: .: :. ..: ..: .::.::. . ...:::.:: : :.::
CCDS33 -CYNPKTKTWSVMPPMSTHRHGLGVAVLEGPMYAVGGHDGWSYLNTVERWDPQARQWNFV
490 500 510 520 530 540
290 300 310 320 330 340
pF1KE6 ADLPQPAAGVPCAQACGRLFVCLWRPADTT--AVVEYAVRTDAWLPVAELRRPQSYGHCM
: . : . : : :.:.. : ... .: . .:. : :.. . .. : .
CCDS33 ATMSTPRSTVGVAVLSGKLYAVGGRDGSSCLKSVECFDPHTNKWTLCAQMSKRRG-GVGV
550 560 570 580 590 600
350 360 370 380 390 400
pF1KE6 VAHRDSLYVV--RNGPSDDFLHCAIDCL---NLATGQWTALPGQFVNSKGALFTAVVRGD
.. ::.. ...:.... ::. . : .:::. .. . :. :. . .. ::
CCDS33 TTWNGLLYAIGGHDAPASNLTSRLSDCVERYDPKTDMWTAVASMSI-SRDAVGVCLL-GD
610 620 630 640 650 660
410 420 430 440 450
pF1KE6 TVYTVNRMFTLLYAIEGGTWRLLREKAGFPRPGSLQTFLLRLPPGAPGPVTSTTAEL
.:.:
CCDS33 KLYAVGGYDGQAYLNTVEAYDPQTNEWTQVAPLCLGRAGACVVTVKL
670 680 690 700
458 residues in 1 query sequences
18511270 residues in 32554 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Tue Nov 8 13:52:16 2016 done: Tue Nov 8 13:52:16 2016
Total Scan time: 2.630 Total Display time: 0.040
Function used was FASTA [36.3.4 Apr, 2011]