Result of FASTA (ccds) for
pFN21AE6430
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KE6430, 614 aa
1>>>pF1KE6430 614 - 614 aa - 614 aa
Library: human.CCDS.faa
18511270 residues in 32554 sequences
Statistics: Expectation_n fit: rho(ln(x))= 5.2466+/-0.000976; mu= 19.4695+/- 0.059
mean_var=65.9716+/-13.140, 0's: 0 Z-trim(103.9): 25 B-trim: 232 in 1/51
Lambda= 0.157905
statistics sampled from 7612 (7619) to 7612 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.604), E-opt: 0.2 (0.234), width: 16
Scan time: 2.730
The best scores are: opt bits E(32554)
CCDS7385.1 PAPSS2 gene_id:9060|Hs108|chr10 ( 614) 4171 959.5 0
CCDS44453.1 PAPSS2 gene_id:9060|Hs108|chr10 ( 619) 4151 955.0 0
CCDS3676.1 PAPSS1 gene_id:9061|Hs108|chr4 ( 624) 3381 779.6 0
>>CCDS7385.1 PAPSS2 gene_id:9060|Hs108|chr10 (614 aa)
initn: 4171 init1: 4171 opt: 4171 Z-score: 5131.1 bits: 959.5 E(32554): 0
Smith-Waterman score: 4171; 100.0% identity (100.0% similar) in 614 aa overlap (1-614:1-614)
10 20 30 40 50 60
pF1KE6 MSGIKKQKTENQQKSTNVVYQAHHVSRNKRGQVVGTRGGFRGCTVWLTGLSGAGKTTISF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS73 MSGIKKQKTENQQKSTNVVYQAHHVSRNKRGQVVGTRGGFRGCTVWLTGLSGAGKTTISF
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE6 ALEEYLVSHAIPCYSLDGDNVRHGLNRNLGFSPGDREENIRRIAEVAKLFADAGLVCITS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS73 ALEEYLVSHAIPCYSLDGDNVRHGLNRNLGFSPGDREENIRRIAEVAKLFADAGLVCITS
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE6 FISPFAKDRENARKIHESAGLPFFEIFVDAPLNICESRDVKGLYKRARAGEIKGFTGIDS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS73 FISPFAKDRENARKIHESAGLPFFEIFVDAPLNICESRDVKGLYKRARAGEIKGFTGIDS
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE6 DYEKPETPERVLKTNLSTVSDCVHQVVELLQEQNIVPYTIIKDIHELFVPENKLDHVRAE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS73 DYEKPETPERVLKTNLSTVSDCVHQVVELLQEQNIVPYTIIKDIHELFVPENKLDHVRAE
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE6 AETLPSLSITKLDLQWVQVLSEGWATPLKGFMREKEYLQVMHFDTLLDDGVINMSIPIVL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS73 AETLPSLSITKLDLQWVQVLSEGWATPLKGFMREKEYLQVMHFDTLLDDGVINMSIPIVL
250 260 270 280 290 300
310 320 330 340 350 360
pF1KE6 PVSAEDKTRLEGCSKFVLAHGGRRVAILRDAEFYEHRKEERCSRVWGTTCTKHPHIKMVM
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS73 PVSAEDKTRLEGCSKFVLAHGGRRVAILRDAEFYEHRKEERCSRVWGTTCTKHPHIKMVM
310 320 330 340 350 360
370 380 390 400 410 420
pF1KE6 ESGDWLVGGDLQVLEKIRWNDGLDQYRLTPLELKQKCKEMNADAVFAFQLRNPVHNGHAL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS73 ESGDWLVGGDLQVLEKIRWNDGLDQYRLTPLELKQKCKEMNADAVFAFQLRNPVHNGHAL
370 380 390 400 410 420
430 440 450 460 470 480
pF1KE6 LMQDTRRRLLERGYKHPVLLLHPLGGWTKDDDVPLDWRMKQHAAVLEEGVLDPKSTIVAI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS73 LMQDTRRRLLERGYKHPVLLLHPLGGWTKDDDVPLDWRMKQHAAVLEEGVLDPKSTIVAI
430 440 450 460 470 480
490 500 510 520 530 540
pF1KE6 FPSPMLYAGPTEVQWHCRSRMIAGANFYIVGRDPAGMPHPETKKDLYEPTHGGKVLSMAP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS73 FPSPMLYAGPTEVQWHCRSRMIAGANFYIVGRDPAGMPHPETKKDLYEPTHGGKVLSMAP
490 500 510 520 530 540
550 560 570 580 590 600
pF1KE6 GLTSVEIIPFRVAAYNKAKKAMDFYDPARHNEFDFISGTRMRKLAREGENPPDGFMAPKA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS73 GLTSVEIIPFRVAAYNKAKKAMDFYDPARHNEFDFISGTRMRKLAREGENPPDGFMAPKA
550 560 570 580 590 600
610
pF1KE6 WKVLTDYYRSLEKN
::::::::::::::
CCDS73 WKVLTDYYRSLEKN
610
>>CCDS44453.1 PAPSS2 gene_id:9060|Hs108|chr10 (619 aa)
initn: 2269 init1: 2269 opt: 4151 Z-score: 5106.5 bits: 955.0 E(32554): 0
Smith-Waterman score: 4151; 99.2% identity (99.2% similar) in 619 aa overlap (1-614:1-619)
10 20 30 40 50 60
pF1KE6 MSGIKKQKTENQQKSTNVVYQAHHVSRNKRGQVVGTRGGFRGCTVWLTGLSGAGKTTISF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS44 MSGIKKQKTENQQKSTNVVYQAHHVSRNKRGQVVGTRGGFRGCTVWLTGLSGAGKTTISF
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE6 ALEEYLVSHAIPCYSLDGDNVRHGLNRNLGFSPGDREENIRRIAEVAKLFADAGLVCITS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS44 ALEEYLVSHAIPCYSLDGDNVRHGLNRNLGFSPGDREENIRRIAEVAKLFADAGLVCITS
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE6 FISPFAKDRENARKIHESAGLPFFEIFVDAPLNICESRDVKGLYKRARAGEIKGFTGIDS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS44 FISPFAKDRENARKIHESAGLPFFEIFVDAPLNICESRDVKGLYKRARAGEIKGFTGIDS
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE6 DYEKPETPERVLKTNLSTVSDCVHQVVELLQEQNIVPYTIIKDIHELFVPENKLDHVRAE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS44 DYEKPETPERVLKTNLSTVSDCVHQVVELLQEQNIVPYTIIKDIHELFVPENKLDHVRAE
190 200 210 220 230 240
250 260 270 280 290
pF1KE6 AETLPSLSITKLDLQWVQVLSEGWATPLKGFMREKEYLQVMHFDTLLD-----DGVINMS
:::::::::::::::::::::::::::::::::::::::::::::::: :::::::
CCDS44 AETLPSLSITKLDLQWVQVLSEGWATPLKGFMREKEYLQVMHFDTLLDGMALPDGVINMS
250 260 270 280 290 300
300 310 320 330 340 350
pF1KE6 IPIVLPVSAEDKTRLEGCSKFVLAHGGRRVAILRDAEFYEHRKEERCSRVWGTTCTKHPH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS44 IPIVLPVSAEDKTRLEGCSKFVLAHGGRRVAILRDAEFYEHRKEERCSRVWGTTCTKHPH
310 320 330 340 350 360
360 370 380 390 400 410
pF1KE6 IKMVMESGDWLVGGDLQVLEKIRWNDGLDQYRLTPLELKQKCKEMNADAVFAFQLRNPVH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS44 IKMVMESGDWLVGGDLQVLEKIRWNDGLDQYRLTPLELKQKCKEMNADAVFAFQLRNPVH
370 380 390 400 410 420
420 430 440 450 460 470
pF1KE6 NGHALLMQDTRRRLLERGYKHPVLLLHPLGGWTKDDDVPLDWRMKQHAAVLEEGVLDPKS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS44 NGHALLMQDTRRRLLERGYKHPVLLLHPLGGWTKDDDVPLDWRMKQHAAVLEEGVLDPKS
430 440 450 460 470 480
480 490 500 510 520 530
pF1KE6 TIVAIFPSPMLYAGPTEVQWHCRSRMIAGANFYIVGRDPAGMPHPETKKDLYEPTHGGKV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS44 TIVAIFPSPMLYAGPTEVQWHCRSRMIAGANFYIVGRDPAGMPHPETKKDLYEPTHGGKV
490 500 510 520 530 540
540 550 560 570 580 590
pF1KE6 LSMAPGLTSVEIIPFRVAAYNKAKKAMDFYDPARHNEFDFISGTRMRKLAREGENPPDGF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS44 LSMAPGLTSVEIIPFRVAAYNKAKKAMDFYDPARHNEFDFISGTRMRKLAREGENPPDGF
550 560 570 580 590 600
600 610
pF1KE6 MAPKAWKVLTDYYRSLEKN
:::::::::::::::::::
CCDS44 MAPKAWKVLTDYYRSLEKN
610
>>CCDS3676.1 PAPSS1 gene_id:9061|Hs108|chr4 (624 aa)
initn: 3381 init1: 3381 opt: 3381 Z-score: 4158.4 bits: 779.6 E(32554): 0
Smith-Waterman score: 3381; 78.4% identity (94.0% similar) in 601 aa overlap (13-613:23-623)
10 20 30 40 50
pF1KE6 MSGIKKQKTENQQKSTNVVYQAHHVSRNKRGQVVGTRGGFRGCTVWLTGL
:..:::.:::::::::::::::::::::::::::::::
CCDS36 MEIPGSLCKKVKLSNNAQNWGMQRATNVTYQAHHVSRNKRGQVVGTRGGFRGCTVWLTGL
10 20 30 40 50 60
60 70 80 90 100 110
pF1KE6 SGAGKTTISFALEEYLVSHAIPCYSLDGDNVRHGLNRNLGFSPGDREENIRRIAEVAKLF
:::::::.:.::::::: :.::::.:::::.:.:::.:::::: :::::.::::::::::
CCDS36 SGAGKTTVSMALEEYLVCHGIPCYTLDGDNIRQGLNKNLGFSPEDREENVRRIAEVAKLF
70 80 90 100 110 120
120 130 140 150 160 170
pF1KE6 ADAGLVCITSFISPFAKDRENARKIHESAGLPFFEIFVDAPLNICESRDVKGLYKRARAG
::::::::::::::...::.:::.:::.:.:::::.::::::..::.::::::::.::::
CCDS36 ADAGLVCITSFISPYTQDRNNARQIHEGASLPFFEVFVDAPLHVCEQRDVKGLYKKARAG
130 140 150 160 170 180
180 190 200 210 220 230
pF1KE6 EIKGFTGIDSDYEKPETPERVLKTNLSTVSDCVHQVVELLQEQNIVPYTIIKDIHELFVP
::::::::::.:::::.:: ::::. :.:::.::::::::..::: ...::.::
CCDS36 EIKGFTGIDSEYEKPEAPELVLKTDSCDVNDCVQQVVELLQERDIVPVDASYEVKELYVP
190 200 210 220 230 240
240 250 260 270 280 290
pF1KE6 ENKLDHVRAEAETLPSLSITKLDLQWVQVLSEGWATPLKGFMREKEYLQVMHFDTLLDDG
:::: ....:::::.:.:.:.:.::::::.:::::::.:::::.:::: .::: ::: :
CCDS36 ENKLHLAKTDAETLPALKINKVDMQWVQVLAEGWATPLNGFMREREYLQCLHFDCLLDGG
250 260 270 280 290 300
300 310 320 330 340 350
pF1KE6 VINMSIPIVLPVSAEDKTRLEGCSKFVLAHGGRRVAILRDAEFYEHRKEERCSRVWGTTC
:::.:.:::: .. ::: ::.::. :.: . ::::::::. ::.::::::::.: :::::
CCDS36 VINLSVPIVLTATHEDKERLDGCTAFALMYEGRRVAILRNPEFFEHRKEERCARQWGTTC
310 320 330 340 350 360
360 370 380 390 400 410
pF1KE6 TKHPHIKMVMESGDWLVGGDLQVLEKIRWNDGLDQYRLTPLELKQKCKEMNADAVFAFQL
.::.::::::.::::.:::::::... :::::::::::: ::::: :.:::::::::::
CCDS36 KNHPYIKMVMEQGDWLIGGDLQVLDRVYWNDGLDQYRLTPTELKQKFKDMNADAVFAFQL
370 380 390 400 410 420
420 430 440 450 460 470
pF1KE6 RNPVHNGHALLMQDTRRRLLERGYKHPVLLLHPLGGWTKDDDVPLDWRMKQHAAVLEEGV
:::::::::::::::...::::::..::::::::::::::::::: ::::::::::::::
CCDS36 RNPVHNGHALLMQDTHKQLLERGYRRPVLLLHPLGGWTKDDDVPLMWRMKQHAAVLEEGV
430 440 450 460 470 480
480 490 500 510 520 530
pF1KE6 LDPKSTIVAIFPSPMLYAGPTEVQWHCRSRMIAGANFYIVGRDPAGMPHPETKKDLYEPT
:.:..:.::::::::.::::::::::::.::.:::::::::::::::::::: ::::::.
CCDS36 LNPETTVVAIFPSPMMYAGPTEVQWHCRARMVAGANFYIVGRDPAGMPHPETGKDLYEPS
490 500 510 520 530 540
540 550 560 570 580 590
pF1KE6 HGGKVLSMAPGLTSVEIIPFRVAAYNKAKKAMDFYDPARHNEFDFISGTRMRKLAREGEN
::.:::.::::: ..::.::::::::: :: ::.:: .:..:.::::::::::::::..
CCDS36 HGAKVLTMAPGLITLEIVPFRVAAYNKKKKRMDYYDSEHHEDFEFISGTRMRKLAREGQK
550 560 570 580 590 600
600 610
pF1KE6 PPDGFMAPKAWKVLTDYYRSLEKN
::.:::::::: :::.::.::::
CCDS36 PPEGFMAPKAWTVLTEYYKSLEKA
610 620
614 residues in 1 query sequences
18511270 residues in 32554 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Tue Nov 8 13:13:28 2016 done: Tue Nov 8 13:13:29 2016
Total Scan time: 2.730 Total Display time: 0.030
Function used was FASTA [36.3.4 Apr, 2011]