Result of FASTA (omim) for
pFN21AE6422
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KE6422, 501 aa
1>>>pF1KE6422 501 - 501 aa - 501 aa
Library: /omim/omim.rfq.tfa
60827320 residues in 85289 sequences
Statistics: Expectation_n fit: rho(ln(x))= 6.0398+/-0.000336; mu= 14.9855+/- 0.021
mean_var=86.2102+/-17.368, 0's: 0 Z-trim(115.6): 169 B-trim: 0 in 0/58
Lambda= 0.138132
statistics sampled from 25911 (26103) to 25911 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.67), E-opt: 0.2 (0.306), width: 16
Scan time: 6.760
The best scores are: opt bits E(85289)
NP_872345 (OMIM: 186975) T-complex-associated test ( 501) 3315 670.6 2.8e-192
XP_011512638 (OMIM: 186975) PREDICTED: T-complex-a ( 501) 3315 670.6 2.8e-192
XP_011512640 (OMIM: 186975) PREDICTED: T-complex-a ( 501) 3315 670.6 2.8e-192
XP_005248929 (OMIM: 186975) PREDICTED: T-complex-a ( 501) 3315 670.6 2.8e-192
XP_006715072 (OMIM: 186975) PREDICTED: T-complex-a ( 402) 2688 545.6 9.6e-155
XP_011512641 (OMIM: 186975) PREDICTED: T-complex-a ( 402) 2688 545.6 9.6e-155
XP_005248931 (OMIM: 186975) PREDICTED: T-complex-a ( 402) 2688 545.6 9.6e-155
XP_005248930 (OMIM: 186975) PREDICTED: T-complex-a ( 414) 2378 483.9 3.9e-136
XP_011512642 (OMIM: 186975) PREDICTED: T-complex-a ( 351) 1934 395.3 1.5e-109
XP_016878527 (OMIM: 615648) PREDICTED: protein NLR (1030) 364 82.7 5.5e-15
XP_016878526 (OMIM: 615648) PREDICTED: protein NLR (1039) 364 82.7 5.6e-15
NP_849172 (OMIM: 615648) protein NLRC3 [Homo sapie (1065) 364 82.7 5.7e-15
XP_016878521 (OMIM: 615648) PREDICTED: protein NLR (1074) 364 82.7 5.7e-15
XP_016878524 (OMIM: 615648) PREDICTED: protein NLR (1074) 364 82.7 5.7e-15
XP_016878522 (OMIM: 615648) PREDICTED: protein NLR (1074) 364 82.7 5.7e-15
XP_016878519 (OMIM: 615648) PREDICTED: protein NLR (1074) 364 82.7 5.7e-15
XP_016878525 (OMIM: 615648) PREDICTED: protein NLR (1074) 364 82.7 5.7e-15
XP_016878523 (OMIM: 615648) PREDICTED: protein NLR (1074) 364 82.7 5.7e-15
XP_016878516 (OMIM: 615648) PREDICTED: protein NLR (1074) 364 82.7 5.7e-15
XP_016878517 (OMIM: 615648) PREDICTED: protein NLR (1074) 364 82.7 5.7e-15
XP_016878520 (OMIM: 615648) PREDICTED: protein NLR (1074) 364 82.7 5.7e-15
XP_016878518 (OMIM: 615648) PREDICTED: protein NLR (1074) 364 82.7 5.7e-15
XP_016878528 (OMIM: 615648) PREDICTED: protein NLR ( 951) 277 65.4 8.6e-10
XP_005249633 (OMIM: 605980) PREDICTED: nucleotide- ( 705) 259 61.7 8e-09
XP_006715696 (OMIM: 605980) PREDICTED: nucleotide- ( 953) 259 61.8 1e-08
XP_005249625 (OMIM: 605980) PREDICTED: nucleotide- ( 953) 259 61.8 1e-08
XP_005249629 (OMIM: 605980) PREDICTED: nucleotide- ( 953) 259 61.8 1e-08
XP_011513381 (OMIM: 605980) PREDICTED: nucleotide- ( 953) 259 61.8 1e-08
NP_006083 (OMIM: 605980) nucleotide-binding oligom ( 953) 259 61.8 1e-08
XP_011513382 (OMIM: 605980) PREDICTED: nucleotide- ( 953) 259 61.8 1e-08
XP_011513383 (OMIM: 605980) PREDICTED: nucleotide- ( 953) 259 61.8 1e-08
XP_016867163 (OMIM: 605980) PREDICTED: nucleotide- ( 929) 258 61.6 1.2e-08
XP_011521561 (OMIM: 186580,266600,605956,607507,60 ( 818) 257 61.3 1.2e-08
XP_016879025 (OMIM: 186580,266600,605956,607507,60 ( 818) 257 61.3 1.2e-08
XP_016879026 (OMIM: 186580,266600,605956,607507,60 ( 818) 257 61.3 1.2e-08
XP_016879027 (OMIM: 186580,266600,605956,607507,60 ( 818) 257 61.3 1.2e-08
XP_016879024 (OMIM: 186580,266600,605956,607507,60 ( 849) 257 61.4 1.2e-08
XP_005256141 (OMIM: 186580,266600,605956,607507,60 (1013) 257 61.4 1.4e-08
NP_001280486 (OMIM: 186580,266600,605956,607507,60 (1013) 257 61.4 1.4e-08
NP_071445 (OMIM: 186580,266600,605956,607507,60946 (1040) 257 61.4 1.5e-08
XP_011513385 (OMIM: 605980) PREDICTED: nucleotide- ( 937) 232 56.4 4.2e-07
XP_006721305 (OMIM: 186580,266600,605956,607507,60 ( 985) 231 56.2 5.1e-07
XP_016882950 (OMIM: 609648,611762) PREDICTED: NACH (1005) 215 53.0 4.7e-06
NP_653288 (OMIM: 609648,611762) NACHT, LRR and PYD (1061) 215 53.0 4.9e-06
NP_001264055 (OMIM: 609648,611762) NACHT, LRR and (1062) 215 53.0 4.9e-06
XP_016867164 (OMIM: 605980) PREDICTED: nucleotide- ( 925) 210 52.0 8.7e-06
XP_011513386 (OMIM: 605980) PREDICTED: nucleotide- ( 925) 210 52.0 8.7e-06
NP_789780 (OMIM: 609660) NACHT, LRR and PYD domain (1043) 208 51.6 1.3e-05
XP_011521678 (OMIM: 613537) PREDICTED: protein NLR (1154) 207 51.5 1.6e-05
NP_001307986 (OMIM: 609660) NACHT, LRR and PYD dom (1036) 204 50.8 2.2e-05
>>NP_872345 (OMIM: 186975) T-complex-associated testis-e (501 aa)
initn: 3315 init1: 3315 opt: 3315 Z-score: 3573.0 bits: 670.6 E(85289): 2.8e-192
Smith-Waterman score: 3315; 99.6% identity (99.8% similar) in 501 aa overlap (1-501:1-501)
10 20 30 40 50 60
pF1KE6 MQDTVTTSALLDPSHSSVSTQDNSSTGGHTSSTSLQLSKPSITPVPAKSRNPRPRANIRR
:::::::::::::::::::::::::::::::::: :::::::::::::::::.:::::::
NP_872 MQDTVTTSALLDPSHSSVSTQDNSSTGGHTSSTSPQLSKPSITPVPAKSRNPHPRANIRR
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE6 MRRIIAEDPEWSLAIVPLLTELCIQHIIRNFQKNPILKQMLPEHQQKVLNHLSPDLPLAV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_872 MRRIIAEDPEWSLAIVPLLTELCIQHIIRNFQKNPILKQMLPEHQQKVLNHLSPDLPLAV
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE6 TANLIDSENYWLRCCMHRWPVCHVAHHGGSWKRMFFERHLENLLKHFIPGTTDPAVILDL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_872 TANLIDSENYWLRCCMHRWPVCHVAHHGGSWKRMFFERHLENLLKHFIPGTTDPAVILDL
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE6 LPLCRNYVRRVHVDQFLPPVQLPAQLRPGDQSDSGSEGEMEEPTVDHYQLGDLVAGLSHL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_872 LPLCRNYVRRVHVDQFLPPVQLPAQLRPGDQSDSGSEGEMEEPTVDHYQLGDLVAGLSHL
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE6 EELDLVYDVKDCGMNFEWNLFLFTYRDCLSLAAAIKACHTLKIFKLTRSKVDDDKARIII
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_872 EELDLVYDVKDCGMNFEWNLFLFTYRDCLSLAAAIKACHTLKIFKLTRSKVDDDKARIII
250 260 270 280 290 300
310 320 330 340 350 360
pF1KE6 RSLLDHPVLEELDLSQNLIGDRGARGAAKLLSHSRLRVLNLANNQVRAPGAQSLAHALAH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_872 RSLLDHPVLEELDLSQNLIGDRGARGAAKLLSHSRLRVLNLANNQVRAPGAQSLAHALAH
310 320 330 340 350 360
370 380 390 400 410 420
pF1KE6 NTNLISLNLRLNCIEDEGGQALAHALQTNKCLTTLHLGGNELSEPTATLLSQVLAINTTL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_872 NTNLISLNLRLNCIEDEGGQALAHALQTNKCLTTLHLGGNELSEPTATLLSQVLAINTTL
370 380 390 400 410 420
430 440 450 460 470 480
pF1KE6 TSINLSCNHIGLDGGKQLLEGMSDNKTLLEFDLRLSDVAQESEYLIGQALYANREAARQR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_872 TSINLSCNHIGLDGGKQLLEGMSDNKTLLEFDLRLSDVAQESEYLIGQALYANREAARQR
430 440 450 460 470 480
490 500
pF1KE6 ALNPSHFMSTITANGPENSVG
:::::::::::::::::::::
NP_872 ALNPSHFMSTITANGPENSVG
490 500
>>XP_011512638 (OMIM: 186975) PREDICTED: T-complex-assoc (501 aa)
initn: 3315 init1: 3315 opt: 3315 Z-score: 3573.0 bits: 670.6 E(85289): 2.8e-192
Smith-Waterman score: 3315; 99.6% identity (99.8% similar) in 501 aa overlap (1-501:1-501)
10 20 30 40 50 60
pF1KE6 MQDTVTTSALLDPSHSSVSTQDNSSTGGHTSSTSLQLSKPSITPVPAKSRNPRPRANIRR
:::::::::::::::::::::::::::::::::: :::::::::::::::::.:::::::
XP_011 MQDTVTTSALLDPSHSSVSTQDNSSTGGHTSSTSPQLSKPSITPVPAKSRNPHPRANIRR
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE6 MRRIIAEDPEWSLAIVPLLTELCIQHIIRNFQKNPILKQMLPEHQQKVLNHLSPDLPLAV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 MRRIIAEDPEWSLAIVPLLTELCIQHIIRNFQKNPILKQMLPEHQQKVLNHLSPDLPLAV
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE6 TANLIDSENYWLRCCMHRWPVCHVAHHGGSWKRMFFERHLENLLKHFIPGTTDPAVILDL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 TANLIDSENYWLRCCMHRWPVCHVAHHGGSWKRMFFERHLENLLKHFIPGTTDPAVILDL
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE6 LPLCRNYVRRVHVDQFLPPVQLPAQLRPGDQSDSGSEGEMEEPTVDHYQLGDLVAGLSHL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 LPLCRNYVRRVHVDQFLPPVQLPAQLRPGDQSDSGSEGEMEEPTVDHYQLGDLVAGLSHL
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE6 EELDLVYDVKDCGMNFEWNLFLFTYRDCLSLAAAIKACHTLKIFKLTRSKVDDDKARIII
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 EELDLVYDVKDCGMNFEWNLFLFTYRDCLSLAAAIKACHTLKIFKLTRSKVDDDKARIII
250 260 270 280 290 300
310 320 330 340 350 360
pF1KE6 RSLLDHPVLEELDLSQNLIGDRGARGAAKLLSHSRLRVLNLANNQVRAPGAQSLAHALAH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 RSLLDHPVLEELDLSQNLIGDRGARGAAKLLSHSRLRVLNLANNQVRAPGAQSLAHALAH
310 320 330 340 350 360
370 380 390 400 410 420
pF1KE6 NTNLISLNLRLNCIEDEGGQALAHALQTNKCLTTLHLGGNELSEPTATLLSQVLAINTTL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 NTNLISLNLRLNCIEDEGGQALAHALQTNKCLTTLHLGGNELSEPTATLLSQVLAINTTL
370 380 390 400 410 420
430 440 450 460 470 480
pF1KE6 TSINLSCNHIGLDGGKQLLEGMSDNKTLLEFDLRLSDVAQESEYLIGQALYANREAARQR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 TSINLSCNHIGLDGGKQLLEGMSDNKTLLEFDLRLSDVAQESEYLIGQALYANREAARQR
430 440 450 460 470 480
490 500
pF1KE6 ALNPSHFMSTITANGPENSVG
:::::::::::::::::::::
XP_011 ALNPSHFMSTITANGPENSVG
490 500
>>XP_011512640 (OMIM: 186975) PREDICTED: T-complex-assoc (501 aa)
initn: 3315 init1: 3315 opt: 3315 Z-score: 3573.0 bits: 670.6 E(85289): 2.8e-192
Smith-Waterman score: 3315; 99.6% identity (99.8% similar) in 501 aa overlap (1-501:1-501)
10 20 30 40 50 60
pF1KE6 MQDTVTTSALLDPSHSSVSTQDNSSTGGHTSSTSLQLSKPSITPVPAKSRNPRPRANIRR
:::::::::::::::::::::::::::::::::: :::::::::::::::::.:::::::
XP_011 MQDTVTTSALLDPSHSSVSTQDNSSTGGHTSSTSPQLSKPSITPVPAKSRNPHPRANIRR
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE6 MRRIIAEDPEWSLAIVPLLTELCIQHIIRNFQKNPILKQMLPEHQQKVLNHLSPDLPLAV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 MRRIIAEDPEWSLAIVPLLTELCIQHIIRNFQKNPILKQMLPEHQQKVLNHLSPDLPLAV
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE6 TANLIDSENYWLRCCMHRWPVCHVAHHGGSWKRMFFERHLENLLKHFIPGTTDPAVILDL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 TANLIDSENYWLRCCMHRWPVCHVAHHGGSWKRMFFERHLENLLKHFIPGTTDPAVILDL
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE6 LPLCRNYVRRVHVDQFLPPVQLPAQLRPGDQSDSGSEGEMEEPTVDHYQLGDLVAGLSHL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 LPLCRNYVRRVHVDQFLPPVQLPAQLRPGDQSDSGSEGEMEEPTVDHYQLGDLVAGLSHL
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE6 EELDLVYDVKDCGMNFEWNLFLFTYRDCLSLAAAIKACHTLKIFKLTRSKVDDDKARIII
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 EELDLVYDVKDCGMNFEWNLFLFTYRDCLSLAAAIKACHTLKIFKLTRSKVDDDKARIII
250 260 270 280 290 300
310 320 330 340 350 360
pF1KE6 RSLLDHPVLEELDLSQNLIGDRGARGAAKLLSHSRLRVLNLANNQVRAPGAQSLAHALAH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 RSLLDHPVLEELDLSQNLIGDRGARGAAKLLSHSRLRVLNLANNQVRAPGAQSLAHALAH
310 320 330 340 350 360
370 380 390 400 410 420
pF1KE6 NTNLISLNLRLNCIEDEGGQALAHALQTNKCLTTLHLGGNELSEPTATLLSQVLAINTTL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 NTNLISLNLRLNCIEDEGGQALAHALQTNKCLTTLHLGGNELSEPTATLLSQVLAINTTL
370 380 390 400 410 420
430 440 450 460 470 480
pF1KE6 TSINLSCNHIGLDGGKQLLEGMSDNKTLLEFDLRLSDVAQESEYLIGQALYANREAARQR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 TSINLSCNHIGLDGGKQLLEGMSDNKTLLEFDLRLSDVAQESEYLIGQALYANREAARQR
430 440 450 460 470 480
490 500
pF1KE6 ALNPSHFMSTITANGPENSVG
:::::::::::::::::::::
XP_011 ALNPSHFMSTITANGPENSVG
490 500
>>XP_005248929 (OMIM: 186975) PREDICTED: T-complex-assoc (501 aa)
initn: 3315 init1: 3315 opt: 3315 Z-score: 3573.0 bits: 670.6 E(85289): 2.8e-192
Smith-Waterman score: 3315; 99.6% identity (99.8% similar) in 501 aa overlap (1-501:1-501)
10 20 30 40 50 60
pF1KE6 MQDTVTTSALLDPSHSSVSTQDNSSTGGHTSSTSLQLSKPSITPVPAKSRNPRPRANIRR
:::::::::::::::::::::::::::::::::: :::::::::::::::::.:::::::
XP_005 MQDTVTTSALLDPSHSSVSTQDNSSTGGHTSSTSPQLSKPSITPVPAKSRNPHPRANIRR
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE6 MRRIIAEDPEWSLAIVPLLTELCIQHIIRNFQKNPILKQMLPEHQQKVLNHLSPDLPLAV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 MRRIIAEDPEWSLAIVPLLTELCIQHIIRNFQKNPILKQMLPEHQQKVLNHLSPDLPLAV
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE6 TANLIDSENYWLRCCMHRWPVCHVAHHGGSWKRMFFERHLENLLKHFIPGTTDPAVILDL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 TANLIDSENYWLRCCMHRWPVCHVAHHGGSWKRMFFERHLENLLKHFIPGTTDPAVILDL
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE6 LPLCRNYVRRVHVDQFLPPVQLPAQLRPGDQSDSGSEGEMEEPTVDHYQLGDLVAGLSHL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 LPLCRNYVRRVHVDQFLPPVQLPAQLRPGDQSDSGSEGEMEEPTVDHYQLGDLVAGLSHL
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE6 EELDLVYDVKDCGMNFEWNLFLFTYRDCLSLAAAIKACHTLKIFKLTRSKVDDDKARIII
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 EELDLVYDVKDCGMNFEWNLFLFTYRDCLSLAAAIKACHTLKIFKLTRSKVDDDKARIII
250 260 270 280 290 300
310 320 330 340 350 360
pF1KE6 RSLLDHPVLEELDLSQNLIGDRGARGAAKLLSHSRLRVLNLANNQVRAPGAQSLAHALAH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 RSLLDHPVLEELDLSQNLIGDRGARGAAKLLSHSRLRVLNLANNQVRAPGAQSLAHALAH
310 320 330 340 350 360
370 380 390 400 410 420
pF1KE6 NTNLISLNLRLNCIEDEGGQALAHALQTNKCLTTLHLGGNELSEPTATLLSQVLAINTTL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 NTNLISLNLRLNCIEDEGGQALAHALQTNKCLTTLHLGGNELSEPTATLLSQVLAINTTL
370 380 390 400 410 420
430 440 450 460 470 480
pF1KE6 TSINLSCNHIGLDGGKQLLEGMSDNKTLLEFDLRLSDVAQESEYLIGQALYANREAARQR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 TSINLSCNHIGLDGGKQLLEGMSDNKTLLEFDLRLSDVAQESEYLIGQALYANREAARQR
430 440 450 460 470 480
490 500
pF1KE6 ALNPSHFMSTITANGPENSVG
:::::::::::::::::::::
XP_005 ALNPSHFMSTITANGPENSVG
490 500
>>XP_006715072 (OMIM: 186975) PREDICTED: T-complex-assoc (402 aa)
initn: 2688 init1: 2688 opt: 2688 Z-score: 2899.1 bits: 545.6 E(85289): 9.6e-155
Smith-Waterman score: 2688; 100.0% identity (100.0% similar) in 402 aa overlap (100-501:1-402)
70 80 90 100 110 120
pF1KE6 EWSLAIVPLLTELCIQHIIRNFQKNPILKQMLPEHQQKVLNHLSPDLPLAVTANLIDSEN
::::::::::::::::::::::::::::::
XP_006 MLPEHQQKVLNHLSPDLPLAVTANLIDSEN
10 20 30
130 140 150 160 170 180
pF1KE6 YWLRCCMHRWPVCHVAHHGGSWKRMFFERHLENLLKHFIPGTTDPAVILDLLPLCRNYVR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 YWLRCCMHRWPVCHVAHHGGSWKRMFFERHLENLLKHFIPGTTDPAVILDLLPLCRNYVR
40 50 60 70 80 90
190 200 210 220 230 240
pF1KE6 RVHVDQFLPPVQLPAQLRPGDQSDSGSEGEMEEPTVDHYQLGDLVAGLSHLEELDLVYDV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 RVHVDQFLPPVQLPAQLRPGDQSDSGSEGEMEEPTVDHYQLGDLVAGLSHLEELDLVYDV
100 110 120 130 140 150
250 260 270 280 290 300
pF1KE6 KDCGMNFEWNLFLFTYRDCLSLAAAIKACHTLKIFKLTRSKVDDDKARIIIRSLLDHPVL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 KDCGMNFEWNLFLFTYRDCLSLAAAIKACHTLKIFKLTRSKVDDDKARIIIRSLLDHPVL
160 170 180 190 200 210
310 320 330 340 350 360
pF1KE6 EELDLSQNLIGDRGARGAAKLLSHSRLRVLNLANNQVRAPGAQSLAHALAHNTNLISLNL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 EELDLSQNLIGDRGARGAAKLLSHSRLRVLNLANNQVRAPGAQSLAHALAHNTNLISLNL
220 230 240 250 260 270
370 380 390 400 410 420
pF1KE6 RLNCIEDEGGQALAHALQTNKCLTTLHLGGNELSEPTATLLSQVLAINTTLTSINLSCNH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 RLNCIEDEGGQALAHALQTNKCLTTLHLGGNELSEPTATLLSQVLAINTTLTSINLSCNH
280 290 300 310 320 330
430 440 450 460 470 480
pF1KE6 IGLDGGKQLLEGMSDNKTLLEFDLRLSDVAQESEYLIGQALYANREAARQRALNPSHFMS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 IGLDGGKQLLEGMSDNKTLLEFDLRLSDVAQESEYLIGQALYANREAARQRALNPSHFMS
340 350 360 370 380 390
490 500
pF1KE6 TITANGPENSVG
::::::::::::
XP_006 TITANGPENSVG
400
>>XP_011512641 (OMIM: 186975) PREDICTED: T-complex-assoc (402 aa)
initn: 2688 init1: 2688 opt: 2688 Z-score: 2899.1 bits: 545.6 E(85289): 9.6e-155
Smith-Waterman score: 2688; 100.0% identity (100.0% similar) in 402 aa overlap (100-501:1-402)
70 80 90 100 110 120
pF1KE6 EWSLAIVPLLTELCIQHIIRNFQKNPILKQMLPEHQQKVLNHLSPDLPLAVTANLIDSEN
::::::::::::::::::::::::::::::
XP_011 MLPEHQQKVLNHLSPDLPLAVTANLIDSEN
10 20 30
130 140 150 160 170 180
pF1KE6 YWLRCCMHRWPVCHVAHHGGSWKRMFFERHLENLLKHFIPGTTDPAVILDLLPLCRNYVR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 YWLRCCMHRWPVCHVAHHGGSWKRMFFERHLENLLKHFIPGTTDPAVILDLLPLCRNYVR
40 50 60 70 80 90
190 200 210 220 230 240
pF1KE6 RVHVDQFLPPVQLPAQLRPGDQSDSGSEGEMEEPTVDHYQLGDLVAGLSHLEELDLVYDV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 RVHVDQFLPPVQLPAQLRPGDQSDSGSEGEMEEPTVDHYQLGDLVAGLSHLEELDLVYDV
100 110 120 130 140 150
250 260 270 280 290 300
pF1KE6 KDCGMNFEWNLFLFTYRDCLSLAAAIKACHTLKIFKLTRSKVDDDKARIIIRSLLDHPVL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 KDCGMNFEWNLFLFTYRDCLSLAAAIKACHTLKIFKLTRSKVDDDKARIIIRSLLDHPVL
160 170 180 190 200 210
310 320 330 340 350 360
pF1KE6 EELDLSQNLIGDRGARGAAKLLSHSRLRVLNLANNQVRAPGAQSLAHALAHNTNLISLNL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 EELDLSQNLIGDRGARGAAKLLSHSRLRVLNLANNQVRAPGAQSLAHALAHNTNLISLNL
220 230 240 250 260 270
370 380 390 400 410 420
pF1KE6 RLNCIEDEGGQALAHALQTNKCLTTLHLGGNELSEPTATLLSQVLAINTTLTSINLSCNH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 RLNCIEDEGGQALAHALQTNKCLTTLHLGGNELSEPTATLLSQVLAINTTLTSINLSCNH
280 290 300 310 320 330
430 440 450 460 470 480
pF1KE6 IGLDGGKQLLEGMSDNKTLLEFDLRLSDVAQESEYLIGQALYANREAARQRALNPSHFMS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 IGLDGGKQLLEGMSDNKTLLEFDLRLSDVAQESEYLIGQALYANREAARQRALNPSHFMS
340 350 360 370 380 390
490 500
pF1KE6 TITANGPENSVG
::::::::::::
XP_011 TITANGPENSVG
400
>>XP_005248931 (OMIM: 186975) PREDICTED: T-complex-assoc (402 aa)
initn: 2688 init1: 2688 opt: 2688 Z-score: 2899.1 bits: 545.6 E(85289): 9.6e-155
Smith-Waterman score: 2688; 100.0% identity (100.0% similar) in 402 aa overlap (100-501:1-402)
70 80 90 100 110 120
pF1KE6 EWSLAIVPLLTELCIQHIIRNFQKNPILKQMLPEHQQKVLNHLSPDLPLAVTANLIDSEN
::::::::::::::::::::::::::::::
XP_005 MLPEHQQKVLNHLSPDLPLAVTANLIDSEN
10 20 30
130 140 150 160 170 180
pF1KE6 YWLRCCMHRWPVCHVAHHGGSWKRMFFERHLENLLKHFIPGTTDPAVILDLLPLCRNYVR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 YWLRCCMHRWPVCHVAHHGGSWKRMFFERHLENLLKHFIPGTTDPAVILDLLPLCRNYVR
40 50 60 70 80 90
190 200 210 220 230 240
pF1KE6 RVHVDQFLPPVQLPAQLRPGDQSDSGSEGEMEEPTVDHYQLGDLVAGLSHLEELDLVYDV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 RVHVDQFLPPVQLPAQLRPGDQSDSGSEGEMEEPTVDHYQLGDLVAGLSHLEELDLVYDV
100 110 120 130 140 150
250 260 270 280 290 300
pF1KE6 KDCGMNFEWNLFLFTYRDCLSLAAAIKACHTLKIFKLTRSKVDDDKARIIIRSLLDHPVL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 KDCGMNFEWNLFLFTYRDCLSLAAAIKACHTLKIFKLTRSKVDDDKARIIIRSLLDHPVL
160 170 180 190 200 210
310 320 330 340 350 360
pF1KE6 EELDLSQNLIGDRGARGAAKLLSHSRLRVLNLANNQVRAPGAQSLAHALAHNTNLISLNL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 EELDLSQNLIGDRGARGAAKLLSHSRLRVLNLANNQVRAPGAQSLAHALAHNTNLISLNL
220 230 240 250 260 270
370 380 390 400 410 420
pF1KE6 RLNCIEDEGGQALAHALQTNKCLTTLHLGGNELSEPTATLLSQVLAINTTLTSINLSCNH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 RLNCIEDEGGQALAHALQTNKCLTTLHLGGNELSEPTATLLSQVLAINTTLTSINLSCNH
280 290 300 310 320 330
430 440 450 460 470 480
pF1KE6 IGLDGGKQLLEGMSDNKTLLEFDLRLSDVAQESEYLIGQALYANREAARQRALNPSHFMS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 IGLDGGKQLLEGMSDNKTLLEFDLRLSDVAQESEYLIGQALYANREAARQRALNPSHFMS
340 350 360 370 380 390
490 500
pF1KE6 TITANGPENSVG
::::::::::::
XP_005 TITANGPENSVG
400
>>XP_005248930 (OMIM: 186975) PREDICTED: T-complex-assoc (414 aa)
initn: 2751 init1: 2325 opt: 2378 Z-score: 2565.0 bits: 483.9 E(85289): 3.9e-136
Smith-Waterman score: 2581; 82.2% identity (82.4% similar) in 501 aa overlap (1-501:1-414)
10 20 30 40 50 60
pF1KE6 MQDTVTTSALLDPSHSSVSTQDNSSTGGHTSSTSLQLSKPSITPVPAKSRNPRPRANIRR
:::::::::::::::::::::::::::::::::: :::::::::::::::::.:::::::
XP_005 MQDTVTTSALLDPSHSSVSTQDNSSTGGHTSSTSPQLSKPSITPVPAKSRNPHPRANIRR
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE6 MRRIIAEDPEWSLAIVPLLTELCIQHIIRNFQKNPILKQMLPEHQQKVLNHLSPDLPLAV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 MRRIIAEDPEWSLAIVPLLTELCIQHIIRNFQKNPILKQMLPEHQQKVLNHLSPDLPLAV
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE6 TANLIDSENYWLRCCMHRWPVCHVAHHGGSWKRMFFERHLENLLKHFIPGTTDPAVILDL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 TANLIDSENYWLRCCMHRWPVCHVAHHGGSWKRMFFERHLENLLKHFIPGTTDPAVILDL
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE6 LPLCRNYVRRVHVDQFLPPVQLPAQLRPGDQSDSGSEGEMEEPTVDHYQLGDLVAGLSHL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 LPLCRNYVRRVHVDQFLPPVQLPAQLRPGDQSDSGSEGEMEEPTVDHYQLGDLVAGLSHL
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE6 EELDLVYDVKDCGMNFEWNLFLFTYRDCLSLAAAIKACHTLKIFKLTRSKVDDDKARIII
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 EELDLVYDVKDCGMNFEWNLFLFTYRDCLSLAAAIKACHTLKIFKLTRSKVDDDKARIII
250 260 270 280 290 300
310 320 330 340 350 360
pF1KE6 RSLLDHPVLEELDLSQNLIGDRGARGAAKLLSHSRLRVLNLANNQVRAPGAQSLAHALAH
:::::::::::::::::::::::::::::::::::::::::::::
XP_005 RSLLDHPVLEELDLSQNLIGDRGARGAAKLLSHSRLRVLNLANNQ---------------
310 320 330 340
370 380 390 400 410 420
pF1KE6 NTNLISLNLRLNCIEDEGGQALAHALQTNKCLTTLHLGGNELSEPTATLLSQVLAINTTL
XP_005 ------------------------------------------------------------
430 440 450 460 470 480
pF1KE6 TSINLSCNHIGLDGGKQLLEGMSDNKTLLEFDLRLSDVAQESEYLIGQALYANREAARQR
::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 ------------DGGKQLLEGMSDNKTLLEFDLRLSDVAQESEYLIGQALYANREAARQR
350 360 370 380 390
490 500
pF1KE6 ALNPSHFMSTITANGPENSVG
:::::::::::::::::::::
XP_005 ALNPSHFMSTITANGPENSVG
400 410
>>XP_011512642 (OMIM: 186975) PREDICTED: T-complex-assoc (351 aa)
initn: 2359 init1: 1933 opt: 1934 Z-score: 2087.9 bits: 395.3 E(85289): 1.5e-109
Smith-Waterman score: 2063; 69.7% identity (69.9% similar) in 501 aa overlap (1-501:1-351)
10 20 30 40 50 60
pF1KE6 MQDTVTTSALLDPSHSSVSTQDNSSTGGHTSSTSLQLSKPSITPVPAKSRNPRPRANIRR
:::::::::::::::::::::::::::::::::: :::::::::::::::::.:::::::
XP_011 MQDTVTTSALLDPSHSSVSTQDNSSTGGHTSSTSPQLSKPSITPVPAKSRNPHPRANIRR
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE6 MRRIIAEDPEWSLAIVPLLTELCIQHIIRNFQKNPILKQMLPEHQQKVLNHLSPDLPLAV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 MRRIIAEDPEWSLAIVPLLTELCIQHIIRNFQKNPILKQMLPEHQQKVLNHLSPDLPLAV
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE6 TANLIDSENYWLRCCMHRWPVCHVAHHGGSWKRMFFERHLENLLKHFIPGTTDPAVILDL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 TANLIDSENYWLRCCMHRWPVCHVAHHGGSWKRMFFERHLENLLKHFIPGTTDPAVILDL
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE6 LPLCRNYVRRVHVDQFLPPVQLPAQLRPGDQSDSGSEGEMEEPTVDHYQLGDLVAGLSHL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 LPLCRNYVRRVHVDQFLPPVQLPAQLRPGDQSDSGSEGEMEEPTVDHYQLGDLVAGLSHL
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE6 EELDLVYDVKDCGMNFEWNLFLFTYRDCLSLAAAIKACHTLKIFKLTRSKVDDDKARIII
::::::::::::::::::::::::::::::::::::::::::
XP_011 EELDLVYDVKDCGMNFEWNLFLFTYRDCLSLAAAIKACHTLK------------------
250 260 270 280
310 320 330 340 350 360
pF1KE6 RSLLDHPVLEELDLSQNLIGDRGARGAAKLLSHSRLRVLNLANNQVRAPGAQSLAHALAH
XP_011 ------------------------------------------------------------
370 380 390 400 410 420
pF1KE6 NTNLISLNLRLNCIEDEGGQALAHALQTNKCLTTLHLGGNELSEPTATLLSQVLAINTTL
XP_011 ------------------------------------------------------------
430 440 450 460 470 480
pF1KE6 TSINLSCNHIGLDGGKQLLEGMSDNKTLLEFDLRLSDVAQESEYLIGQALYANREAARQR
::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 ------------DGGKQLLEGMSDNKTLLEFDLRLSDVAQESEYLIGQALYANREAARQR
290 300 310 320 330
490 500
pF1KE6 ALNPSHFMSTITANGPENSVG
:::::::::::::::::::::
XP_011 ALNPSHFMSTITANGPENSVG
340 350
>>XP_016878527 (OMIM: 615648) PREDICTED: protein NLRC3 i (1030 aa)
initn: 661 init1: 285 opt: 364 Z-score: 390.0 bits: 82.7 E(85289): 5.5e-15
Smith-Waterman score: 364; 33.7% identity (68.3% similar) in 205 aa overlap (271-474:735-939)
250 260 270 280 290 300
pF1KE6 EELDLVYDVKDCGMNFEWNLFLFTYRDCLSLAAAIKACHTLKIFKLTRSKVDDDKARIII
.: :.: ..:: . .. ... : :. .
XP_016 RSMAEALASNRTLSMLHLQKNSIGPMGAQRMADALKQNRSLKELMFSSNSIGDGGAKALA
710 720 730 740 750 760
310 320 330 340 350
pF1KE6 RSLLDHPVLEELDLSQNLIGDRG-ARGAAKLLSHSRLRVLNLANNQVRAPGAQSLAHALA
..: . :: :::..: :.: : : . : ... : :.: .:.. :::..::::
XP_016 EALKVNQGLESLDLQSNSISDAGVAALMGALCTNQTLLSLSLRENSISPEGAQAIAHALC
770 780 790 800 810 820
360 370 380 390 400 410
pF1KE6 HNTNLISLNLRLNCIEDEGGQALAHALQTNKCLTTLHLGGNELSEPTATLLSQVLAINTT
:..: .:.: : ..:.:..:.: :.. :. ::.::: : .. .: :.:.: .: .
XP_016 ANSTLKNLDLTANLLHDQGARAIAVAVRENRTLTSLHLQWNFIQAGAAQALGQALQLNRS
830 840 850 860 870 880
420 430 440 450 460 470
pF1KE6 LTSINLSCNHIGLDGGKQLLEGMSDNKTLLEFDLRLSDVAQESEYLIGQALYANREAARQ
:::..:. : :: ::. . .... : .: . :...... . ..:.:: .::
XP_016 LTSLDLQENAIGDDGACAVARALKVNTALTALYLQVASIGASGAQVLGEALAVNRTLEIL
890 900 910 920 930 940
480 490 500
pF1KE6 RALNPSHFMSTITANGPENSVG
XP_016 DLRGNAIGVAGAKALANALKVNSSLRRLNLQENSLGMDGAICIATALSGNHRLQHINLQG
950 960 970 980 990 1000
>--
initn: 302 init1: 231 opt: 240 Z-score: 256.4 bits: 58.0 E(85289): 1.5e-07
Smith-Waterman score: 240; 35.9% identity (66.9% similar) in 142 aa overlap (299-437:593-734)
270 280 290 300 310 320
pF1KE6 LSLAAAIKACHTLKIFKLTRSKVDDDKARIIIRSLLDHPVL-EELDLSQNLIGDRGARGA
...::: . . ..: :. : . : .
XP_016 PAHRAALAYLLQVSDACAQEANLSLSLSQGVLQSLLPQLLYCRKLRLDTNQFQDPVMELL
570 580 590 600 610 620
330 340 350 360 370 380
pF1KE6 AKLLSHSRLRV--LNLANNQVRAPGAQSLAHALAHNTNLISLNLRLNCIEDEGGQALAHA
...:: . :. ..::.::. ::..::..: : .: ::.:: : : .:..::: :
XP_016 GSVLSGKDCRIQKISLAENQISNKGAKALARSLLVNRSLTSLDLRGNSIGPQGAKALADA
630 640 650 660 670 680
390 400 410 420 430 440
pF1KE6 LQTNKCLTTLHLGGNELSEPTATLLSQVLAINTTLTSINLSCNHIGLDGGKQLLEGMSDN
:. :. ::.: : :: . . : ....:: : ::. ..:. : :: :...
XP_016 LKINRTLTSLSLQGNTVRDDGARSMAEALASNRTLSMLHLQKNSIGPMGAQRMADALKQN
690 700 710 720 730 740
450 460 470 480 490 500
pF1KE6 KTLLEFDLRLSDVAQESEYLIGQALYANREAARQRALNPSHFMSTITANGPENSVG
XP_016 RSLKELMFSSNSIGDGGAKALAEALKVNQGLESLDLQSNSISDAGVAALMGALCTNQTLL
750 760 770 780 790 800
501 residues in 1 query sequences
60827320 residues in 85289 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Tue Nov 8 13:08:21 2016 done: Tue Nov 8 13:08:22 2016
Total Scan time: 6.760 Total Display time: 0.040
Function used was FASTA [36.3.4 Apr, 2011]