Result of FASTA (omim) for
pFN21AE6410
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KE6410, 468 aa
1>>>pF1KE6410 468 - 468 aa - 468 aa
Library: /omim/omim.rfq.tfa
60827320 residues in 85289 sequences
Statistics: Expectation_n fit: rho(ln(x))= 5.0109+/-0.0004; mu= 19.2426+/- 0.025
mean_var=65.1266+/-13.118, 0's: 0 Z-trim(111.0): 22 B-trim: 142 in 1/50
Lambda= 0.158926
statistics sampled from 19463 (19478) to 19463 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.588), E-opt: 0.2 (0.228), width: 16
Scan time: 7.880
The best scores are: opt bits E(85289)
NP_872282 (OMIM: 614647,614650) ubiquinone biosynt ( 468) 3091 717.9 1.4e-206
NP_872286 (OMIM: 614647,614650) ubiquinone biosynt ( 443) 2726 634.2 2.1e-181
XP_006720219 (OMIM: 614647,614650) PREDICTED: ubiq ( 359) 2361 550.5 2.8e-156
XP_011535111 (OMIM: 614647,614650) PREDICTED: ubiq ( 393) 2293 534.9 1.5e-151
XP_011535110 (OMIM: 614647,614650) PREDICTED: ubiq ( 393) 2293 534.9 1.5e-151
XP_011535112 (OMIM: 614647,614650) PREDICTED: ubiq ( 306) 1989 465.1 1.2e-130
XP_011535109 (OMIM: 614647,614650) PREDICTED: ubiq ( 432) 1776 416.4 7.7e-116
XP_016876840 (OMIM: 614647,614650) PREDICTED: ubiq ( 288) 1712 401.6 1.5e-111
XP_016876841 (OMIM: 614647,614650) PREDICTED: ubiq ( 266) 1708 400.7 2.6e-111
>>NP_872282 (OMIM: 614647,614650) ubiquinone biosynthesi (468 aa)
initn: 3091 init1: 3091 opt: 3091 Z-score: 3829.7 bits: 717.9 E(85289): 1.4e-206
Smith-Waterman score: 3091; 100.0% identity (100.0% similar) in 468 aa overlap (1-468:1-468)
10 20 30 40 50 60
pF1KE6 MAARLVSRCGAVRAAPHSGPLVSWRRWSGASTDTVYDVVVSGGGLVGAAMACALGYDIHF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_872 MAARLVSRCGAVRAAPHSGPLVSWRRWSGASTDTVYDVVVSGGGLVGAAMACALGYDIHF
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE6 HDKKILLLEAGPKKVLEKLSETYSNRVSSISPGSATLLSSFGAWDHICNMRYRAFRRMQV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_872 HDKKILLLEAGPKKVLEKLSETYSNRVSSISPGSATLLSSFGAWDHICNMRYRAFRRMQV
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE6 WDACSEALIMFDKDNLDDMGYIVENDVIMHALTKQLEAVSDRVTVLYRSKAIRYTWPCPF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_872 WDACSEALIMFDKDNLDDMGYIVENDVIMHALTKQLEAVSDRVTVLYRSKAIRYTWPCPF
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE6 PMADSSPWVHITLGDGSTFQTKLLIGADGHNSGVRQAVGIQNVSWNYDQSAVVATLHLSE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_872 PMADSSPWVHITLGDGSTFQTKLLIGADGHNSGVRQAVGIQNVSWNYDQSAVVATLHLSE
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE6 ATENNVAWQRFLPSGPIALLPLSDTLSSLVWSTSHEHAAELVSMDEEKFVDAVNSAFWSD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_872 ATENNVAWQRFLPSGPIALLPLSDTLSSLVWSTSHEHAAELVSMDEEKFVDAVNSAFWSD
250 260 270 280 290 300
310 320 330 340 350 360
pF1KE6 ADHTDFIDTAGAMLQYAVSLLKPTKVSARQLPPSVARVDAKSRVLFPLGLGHAAEYVRPR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_872 ADHTDFIDTAGAMLQYAVSLLKPTKVSARQLPPSVARVDAKSRVLFPLGLGHAAEYVRPR
310 320 330 340 350 360
370 380 390 400 410 420
pF1KE6 VALIGDAAHRVHPLAGQGVNMGFGDISSLAHHLSTAAFNGKDLGSVSHLTGYETERQRHN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_872 VALIGDAAHRVHPLAGQGVNMGFGDISSLAHHLSTAAFNGKDLGSVSHLTGYETERQRHN
370 380 390 400 410 420
430 440 450 460
pF1KE6 TALLAATDLLKRLYSTSASPLVLLRTWGLQATNAVSPLKEQIMAFASK
::::::::::::::::::::::::::::::::::::::::::::::::
NP_872 TALLAATDLLKRLYSTSASPLVLLRTWGLQATNAVSPLKEQIMAFASK
430 440 450 460
>>NP_872286 (OMIM: 614647,614650) ubiquinone biosynthesi (443 aa)
initn: 2726 init1: 2726 opt: 2726 Z-score: 3377.7 bits: 634.2 E(85289): 2.1e-181
Smith-Waterman score: 2726; 100.0% identity (100.0% similar) in 414 aa overlap (55-468:30-443)
30 40 50 60 70 80
pF1KE6 RRWSGASTDTVYDVVVSGGGLVGAAMACALGYDIHFHDKKILLLEAGPKKVLEKLSETYS
::::::::::::::::::::::::::::::
NP_872 MRGQGPPLSSFGVWLASRAASDPSRPRRQGYDIHFHDKKILLLEAGPKKVLEKLSETYS
10 20 30 40 50
90 100 110 120 130 140
pF1KE6 NRVSSISPGSATLLSSFGAWDHICNMRYRAFRRMQVWDACSEALIMFDKDNLDDMGYIVE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_872 NRVSSISPGSATLLSSFGAWDHICNMRYRAFRRMQVWDACSEALIMFDKDNLDDMGYIVE
60 70 80 90 100 110
150 160 170 180 190 200
pF1KE6 NDVIMHALTKQLEAVSDRVTVLYRSKAIRYTWPCPFPMADSSPWVHITLGDGSTFQTKLL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_872 NDVIMHALTKQLEAVSDRVTVLYRSKAIRYTWPCPFPMADSSPWVHITLGDGSTFQTKLL
120 130 140 150 160 170
210 220 230 240 250 260
pF1KE6 IGADGHNSGVRQAVGIQNVSWNYDQSAVVATLHLSEATENNVAWQRFLPSGPIALLPLSD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_872 IGADGHNSGVRQAVGIQNVSWNYDQSAVVATLHLSEATENNVAWQRFLPSGPIALLPLSD
180 190 200 210 220 230
270 280 290 300 310 320
pF1KE6 TLSSLVWSTSHEHAAELVSMDEEKFVDAVNSAFWSDADHTDFIDTAGAMLQYAVSLLKPT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_872 TLSSLVWSTSHEHAAELVSMDEEKFVDAVNSAFWSDADHTDFIDTAGAMLQYAVSLLKPT
240 250 260 270 280 290
330 340 350 360 370 380
pF1KE6 KVSARQLPPSVARVDAKSRVLFPLGLGHAAEYVRPRVALIGDAAHRVHPLAGQGVNMGFG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_872 KVSARQLPPSVARVDAKSRVLFPLGLGHAAEYVRPRVALIGDAAHRVHPLAGQGVNMGFG
300 310 320 330 340 350
390 400 410 420 430 440
pF1KE6 DISSLAHHLSTAAFNGKDLGSVSHLTGYETERQRHNTALLAATDLLKRLYSTSASPLVLL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_872 DISSLAHHLSTAAFNGKDLGSVSHLTGYETERQRHNTALLAATDLLKRLYSTSASPLVLL
360 370 380 390 400 410
450 460
pF1KE6 RTWGLQATNAVSPLKEQIMAFASK
::::::::::::::::::::::::
NP_872 RTWGLQATNAVSPLKEQIMAFASK
420 430 440
>>XP_006720219 (OMIM: 614647,614650) PREDICTED: ubiquino (359 aa)
initn: 2361 init1: 2361 opt: 2361 Z-score: 2926.8 bits: 550.5 E(85289): 2.8e-156
Smith-Waterman score: 2361; 100.0% identity (100.0% similar) in 359 aa overlap (110-468:1-359)
80 90 100 110 120 130
pF1KE6 SETYSNRVSSISPGSATLLSSFGAWDHICNMRYRAFRRMQVWDACSEALIMFDKDNLDDM
::::::::::::::::::::::::::::::
XP_006 MRYRAFRRMQVWDACSEALIMFDKDNLDDM
10 20 30
140 150 160 170 180 190
pF1KE6 GYIVENDVIMHALTKQLEAVSDRVTVLYRSKAIRYTWPCPFPMADSSPWVHITLGDGSTF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 GYIVENDVIMHALTKQLEAVSDRVTVLYRSKAIRYTWPCPFPMADSSPWVHITLGDGSTF
40 50 60 70 80 90
200 210 220 230 240 250
pF1KE6 QTKLLIGADGHNSGVRQAVGIQNVSWNYDQSAVVATLHLSEATENNVAWQRFLPSGPIAL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 QTKLLIGADGHNSGVRQAVGIQNVSWNYDQSAVVATLHLSEATENNVAWQRFLPSGPIAL
100 110 120 130 140 150
260 270 280 290 300 310
pF1KE6 LPLSDTLSSLVWSTSHEHAAELVSMDEEKFVDAVNSAFWSDADHTDFIDTAGAMLQYAVS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 LPLSDTLSSLVWSTSHEHAAELVSMDEEKFVDAVNSAFWSDADHTDFIDTAGAMLQYAVS
160 170 180 190 200 210
320 330 340 350 360 370
pF1KE6 LLKPTKVSARQLPPSVARVDAKSRVLFPLGLGHAAEYVRPRVALIGDAAHRVHPLAGQGV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 LLKPTKVSARQLPPSVARVDAKSRVLFPLGLGHAAEYVRPRVALIGDAAHRVHPLAGQGV
220 230 240 250 260 270
380 390 400 410 420 430
pF1KE6 NMGFGDISSLAHHLSTAAFNGKDLGSVSHLTGYETERQRHNTALLAATDLLKRLYSTSAS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 NMGFGDISSLAHHLSTAAFNGKDLGSVSHLTGYETERQRHNTALLAATDLLKRLYSTSAS
280 290 300 310 320 330
440 450 460
pF1KE6 PLVLLRTWGLQATNAVSPLKEQIMAFASK
:::::::::::::::::::::::::::::
XP_006 PLVLLRTWGLQATNAVSPLKEQIMAFASK
340 350
>>XP_011535111 (OMIM: 614647,614650) PREDICTED: ubiquino (393 aa)
initn: 2291 init1: 2291 opt: 2293 Z-score: 2841.9 bits: 534.9 E(85289): 1.5e-151
Smith-Waterman score: 2293; 98.6% identity (99.7% similar) in 356 aa overlap (114-468:38-393)
90 100 110 120 130 140
pF1KE6 SNRVSSISPGSATLLSSFGAWDHICNMRYRAFRRMQV-WDACSEALIMFDKDNLDDMGYI
:..:..: ::::::::::::::::::::::
XP_011 RKSCCSKQVQRKYWRNCQKLTATGSAPFPLALQRFSVVWDACSEALIMFDKDNLDDMGYI
10 20 30 40 50 60
150 160 170 180 190 200
pF1KE6 VENDVIMHALTKQLEAVSDRVTVLYRSKAIRYTWPCPFPMADSSPWVHITLGDGSTFQTK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 VENDVIMHALTKQLEAVSDRVTVLYRSKAIRYTWPCPFPMADSSPWVHITLGDGSTFQTK
70 80 90 100 110 120
210 220 230 240 250 260
pF1KE6 LLIGADGHNSGVRQAVGIQNVSWNYDQSAVVATLHLSEATENNVAWQRFLPSGPIALLPL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 LLIGADGHNSGVRQAVGIQNVSWNYDQSAVVATLHLSEATENNVAWQRFLPSGPIALLPL
130 140 150 160 170 180
270 280 290 300 310 320
pF1KE6 SDTLSSLVWSTSHEHAAELVSMDEEKFVDAVNSAFWSDADHTDFIDTAGAMLQYAVSLLK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 SDTLSSLVWSTSHEHAAELVSMDEEKFVDAVNSAFWSDADHTDFIDTAGAMLQYAVSLLK
190 200 210 220 230 240
330 340 350 360 370 380
pF1KE6 PTKVSARQLPPSVARVDAKSRVLFPLGLGHAAEYVRPRVALIGDAAHRVHPLAGQGVNMG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 PTKVSARQLPPSVARVDAKSRVLFPLGLGHAAEYVRPRVALIGDAAHRVHPLAGQGVNMG
250 260 270 280 290 300
390 400 410 420 430 440
pF1KE6 FGDISSLAHHLSTAAFNGKDLGSVSHLTGYETERQRHNTALLAATDLLKRLYSTSASPLV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 FGDISSLAHHLSTAAFNGKDLGSVSHLTGYETERQRHNTALLAATDLLKRLYSTSASPLV
310 320 330 340 350 360
450 460
pF1KE6 LLRTWGLQATNAVSPLKEQIMAFASK
::::::::::::::::::::::::::
XP_011 LLRTWGLQATNAVSPLKEQIMAFASK
370 380 390
>>XP_011535110 (OMIM: 614647,614650) PREDICTED: ubiquino (393 aa)
initn: 2291 init1: 2291 opt: 2293 Z-score: 2841.9 bits: 534.9 E(85289): 1.5e-151
Smith-Waterman score: 2293; 98.6% identity (99.7% similar) in 356 aa overlap (114-468:38-393)
90 100 110 120 130 140
pF1KE6 SNRVSSISPGSATLLSSFGAWDHICNMRYRAFRRMQV-WDACSEALIMFDKDNLDDMGYI
:..:..: ::::::::::::::::::::::
XP_011 RKSCCSKQVQRKYWRNCQKLTATGSAPFPLALQRFSVVWDACSEALIMFDKDNLDDMGYI
10 20 30 40 50 60
150 160 170 180 190 200
pF1KE6 VENDVIMHALTKQLEAVSDRVTVLYRSKAIRYTWPCPFPMADSSPWVHITLGDGSTFQTK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 VENDVIMHALTKQLEAVSDRVTVLYRSKAIRYTWPCPFPMADSSPWVHITLGDGSTFQTK
70 80 90 100 110 120
210 220 230 240 250 260
pF1KE6 LLIGADGHNSGVRQAVGIQNVSWNYDQSAVVATLHLSEATENNVAWQRFLPSGPIALLPL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 LLIGADGHNSGVRQAVGIQNVSWNYDQSAVVATLHLSEATENNVAWQRFLPSGPIALLPL
130 140 150 160 170 180
270 280 290 300 310 320
pF1KE6 SDTLSSLVWSTSHEHAAELVSMDEEKFVDAVNSAFWSDADHTDFIDTAGAMLQYAVSLLK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 SDTLSSLVWSTSHEHAAELVSMDEEKFVDAVNSAFWSDADHTDFIDTAGAMLQYAVSLLK
190 200 210 220 230 240
330 340 350 360 370 380
pF1KE6 PTKVSARQLPPSVARVDAKSRVLFPLGLGHAAEYVRPRVALIGDAAHRVHPLAGQGVNMG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 PTKVSARQLPPSVARVDAKSRVLFPLGLGHAAEYVRPRVALIGDAAHRVHPLAGQGVNMG
250 260 270 280 290 300
390 400 410 420 430 440
pF1KE6 FGDISSLAHHLSTAAFNGKDLGSVSHLTGYETERQRHNTALLAATDLLKRLYSTSASPLV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 FGDISSLAHHLSTAAFNGKDLGSVSHLTGYETERQRHNTALLAATDLLKRLYSTSASPLV
310 320 330 340 350 360
450 460
pF1KE6 LLRTWGLQATNAVSPLKEQIMAFASK
::::::::::::::::::::::::::
XP_011 LLRTWGLQATNAVSPLKEQIMAFASK
370 380 390
>>XP_011535112 (OMIM: 614647,614650) PREDICTED: ubiquino (306 aa)
initn: 1989 init1: 1989 opt: 1989 Z-score: 2466.8 bits: 465.1 E(85289): 1.2e-130
Smith-Waterman score: 1989; 100.0% identity (100.0% similar) in 297 aa overlap (1-297:1-297)
10 20 30 40 50 60
pF1KE6 MAARLVSRCGAVRAAPHSGPLVSWRRWSGASTDTVYDVVVSGGGLVGAAMACALGYDIHF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 MAARLVSRCGAVRAAPHSGPLVSWRRWSGASTDTVYDVVVSGGGLVGAAMACALGYDIHF
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE6 HDKKILLLEAGPKKVLEKLSETYSNRVSSISPGSATLLSSFGAWDHICNMRYRAFRRMQV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 HDKKILLLEAGPKKVLEKLSETYSNRVSSISPGSATLLSSFGAWDHICNMRYRAFRRMQV
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE6 WDACSEALIMFDKDNLDDMGYIVENDVIMHALTKQLEAVSDRVTVLYRSKAIRYTWPCPF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 WDACSEALIMFDKDNLDDMGYIVENDVIMHALTKQLEAVSDRVTVLYRSKAIRYTWPCPF
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE6 PMADSSPWVHITLGDGSTFQTKLLIGADGHNSGVRQAVGIQNVSWNYDQSAVVATLHLSE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 PMADSSPWVHITLGDGSTFQTKLLIGADGHNSGVRQAVGIQNVSWNYDQSAVVATLHLSE
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE6 ATENNVAWQRFLPSGPIALLPLSDTLSSLVWSTSHEHAAELVSMDEEKFVDAVNSAFWSD
:::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 ATENNVAWQRFLPSGPIALLPLSDTLSSLVWSTSHEHAAELVSMDEEKFVDAVNSAFEQI
250 260 270 280 290 300
310 320 330 340 350 360
pF1KE6 ADHTDFIDTAGAMLQYAVSLLKPTKVSARQLPPSVARVDAKSRVLFPLGLGHAAEYVRPR
XP_011 MAFASK
>>XP_011535109 (OMIM: 614647,614650) PREDICTED: ubiquino (432 aa)
initn: 1776 init1: 1776 opt: 1776 Z-score: 2200.7 bits: 416.4 E(85289): 7.7e-116
Smith-Waterman score: 2785; 92.3% identity (92.3% similar) in 468 aa overlap (1-468:1-432)
10 20 30 40 50 60
pF1KE6 MAARLVSRCGAVRAAPHSGPLVSWRRWSGASTDTVYDVVVSGGGLVGAAMACALGYDIHF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 MAARLVSRCGAVRAAPHSGPLVSWRRWSGASTDTVYDVVVSGGGLVGAAMACALGYDIHF
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE6 HDKKILLLEAGPKKVLEKLSETYSNRVSSISPGSATLLSSFGAWDHICNMRYRAFRRMQV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 HDKKILLLEAGPKKVLEKLSETYSNRVSSISPGSATLLSSFGAWDHICNMRYRAFRRMQV
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE6 WDACSEALIMFDKDNLDDMGYIVENDVIMHALTKQLEAVSDRVTVLYRSKAIRYTWPCPF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 WDACSEALIMFDKDNLDDMGYIVENDVIMHALTKQLEAVSDRVTVLYRSKAIRYTWPCPF
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE6 PMADSSPWVHITLGDGSTFQTKLLIGADGHNSGVRQAVGIQNVSWNYDQSAVVATLHLSE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 PMADSSPWVHITLGDGSTFQTKLLIGADGHNSGVRQAVGIQNVSWNYDQSAVVATLHLSE
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE6 ATENNVAWQRFLPSGPIALLPLSDTLSSLVWSTSHEHAAELVSMDEEKFVDAVNSAFWSD
::::::::::::::::::::: :::
XP_011 ATENNVAWQRFLPSGPIALLP------------------------------------WSD
250 260
310 320 330 340 350 360
pF1KE6 ADHTDFIDTAGAMLQYAVSLLKPTKVSARQLPPSVARVDAKSRVLFPLGLGHAAEYVRPR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 ADHTDFIDTAGAMLQYAVSLLKPTKVSARQLPPSVARVDAKSRVLFPLGLGHAAEYVRPR
270 280 290 300 310 320
370 380 390 400 410 420
pF1KE6 VALIGDAAHRVHPLAGQGVNMGFGDISSLAHHLSTAAFNGKDLGSVSHLTGYETERQRHN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 VALIGDAAHRVHPLAGQGVNMGFGDISSLAHHLSTAAFNGKDLGSVSHLTGYETERQRHN
330 340 350 360 370 380
430 440 450 460
pF1KE6 TALLAATDLLKRLYSTSASPLVLLRTWGLQATNAVSPLKEQIMAFASK
::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 TALLAATDLLKRLYSTSASPLVLLRTWGLQATNAVSPLKEQIMAFASK
390 400 410 420 430
>>XP_016876840 (OMIM: 614647,614650) PREDICTED: ubiquino (288 aa)
initn: 1712 init1: 1712 opt: 1712 Z-score: 2123.9 bits: 401.6 E(85289): 1.5e-111
Smith-Waterman score: 1712; 100.0% identity (100.0% similar) in 265 aa overlap (204-468:24-288)
180 190 200 210 220 230
pF1KE6 YTWPCPFPMADSSPWVHITLGDGSTFQTKLLIGADGHNSGVRQAVGIQNVSWNYDQSAVV
::::::::::::::::::::::::::::::
XP_016 MTWAISWRMMSSCMLSLSSWRLCLIGADGHNSGVRQAVGIQNVSWNYDQSAVV
10 20 30 40 50
240 250 260 270 280 290
pF1KE6 ATLHLSEATENNVAWQRFLPSGPIALLPLSDTLSSLVWSTSHEHAAELVSMDEEKFVDAV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 ATLHLSEATENNVAWQRFLPSGPIALLPLSDTLSSLVWSTSHEHAAELVSMDEEKFVDAV
60 70 80 90 100 110
300 310 320 330 340 350
pF1KE6 NSAFWSDADHTDFIDTAGAMLQYAVSLLKPTKVSARQLPPSVARVDAKSRVLFPLGLGHA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 NSAFWSDADHTDFIDTAGAMLQYAVSLLKPTKVSARQLPPSVARVDAKSRVLFPLGLGHA
120 130 140 150 160 170
360 370 380 390 400 410
pF1KE6 AEYVRPRVALIGDAAHRVHPLAGQGVNMGFGDISSLAHHLSTAAFNGKDLGSVSHLTGYE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 AEYVRPRVALIGDAAHRVHPLAGQGVNMGFGDISSLAHHLSTAAFNGKDLGSVSHLTGYE
180 190 200 210 220 230
420 430 440 450 460
pF1KE6 TERQRHNTALLAATDLLKRLYSTSASPLVLLRTWGLQATNAVSPLKEQIMAFASK
:::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 TERQRHNTALLAATDLLKRLYSTSASPLVLLRTWGLQATNAVSPLKEQIMAFASK
240 250 260 270 280
>>XP_016876841 (OMIM: 614647,614650) PREDICTED: ubiquino (266 aa)
initn: 1708 init1: 1708 opt: 1708 Z-score: 2119.5 bits: 400.7 E(85289): 2.6e-111
Smith-Waterman score: 1708; 99.2% identity (99.6% similar) in 266 aa overlap (203-468:1-266)
180 190 200 210 220 230
pF1KE6 RYTWPCPFPMADSSPWVHITLGDGSTFQTKLLIGADGHNSGVRQAVGIQNVSWNYDQSAV
. ::::::::::::::::::::::::::::
XP_016 MQIGADGHNSGVRQAVGIQNVSWNYDQSAV
10 20 30
240 250 260 270 280 290
pF1KE6 VATLHLSEATENNVAWQRFLPSGPIALLPLSDTLSSLVWSTSHEHAAELVSMDEEKFVDA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 VATLHLSEATENNVAWQRFLPSGPIALLPLSDTLSSLVWSTSHEHAAELVSMDEEKFVDA
40 50 60 70 80 90
300 310 320 330 340 350
pF1KE6 VNSAFWSDADHTDFIDTAGAMLQYAVSLLKPTKVSARQLPPSVARVDAKSRVLFPLGLGH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 VNSAFWSDADHTDFIDTAGAMLQYAVSLLKPTKVSARQLPPSVARVDAKSRVLFPLGLGH
100 110 120 130 140 150
360 370 380 390 400 410
pF1KE6 AAEYVRPRVALIGDAAHRVHPLAGQGVNMGFGDISSLAHHLSTAAFNGKDLGSVSHLTGY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 AAEYVRPRVALIGDAAHRVHPLAGQGVNMGFGDISSLAHHLSTAAFNGKDLGSVSHLTGY
160 170 180 190 200 210
420 430 440 450 460
pF1KE6 ETERQRHNTALLAATDLLKRLYSTSASPLVLLRTWGLQATNAVSPLKEQIMAFASK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 ETERQRHNTALLAATDLLKRLYSTSASPLVLLRTWGLQATNAVSPLKEQIMAFASK
220 230 240 250 260
468 residues in 1 query sequences
60827320 residues in 85289 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Tue Nov 8 13:00:31 2016 done: Tue Nov 8 13:00:32 2016
Total Scan time: 7.880 Total Display time: 0.030
Function used was FASTA [36.3.4 Apr, 2011]