FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448

Query: pF1KE6395, 413 aa
  1>>>pF1KE6395 413 - 413 aa - 413 aa
Library: human.CCDS.faa
  18511270 residues in 32554 sequences

Statistics:  Expectation_n fit: rho(ln(x))= 6.1902+/-0.00096; mu= 13.4032+/- 0.057
 mean_var=106.1823+/-22.047, 0's: 0 Z-trim(106.8): 35  B-trim: 393 in 1/50
 Lambda= 0.124465
 statistics sampled from 9175 (9186) to 9175 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
 ktup: 2, E-join: 1 (0.647), E-opt: 0.2 (0.282), width:  16
 Scan time:  2.550

The best scores are:                                      opt bits E(32554)
CCDS4999.1 PRSS35 gene_id:167681|Hs108|chr6        ( 413) 2813 516.1 2.5e-146
CCDS8278.1 PRSS23 gene_id:11098|Hs108|chr11        ( 383)  805 155.5 8.2e-38


>>CCDS4999.1 PRSS35 gene_id:167681|Hs108|chr6             (413 aa)
 initn: 2813 init1: 2813 opt: 2813  Z-score: 2740.6  bits: 516.1 E(32554): 2.5e-146
Smith-Waterman score: 2813; 99.8% identity (100.0% similar) in 413 aa overlap (1-413:1-413)

               10        20        30        40        50        60
pF1KE6 MENMLLWLIFFTPGWTLIDGSEMEWDFMWHLRKVPRIVSERTFHLTSPAFEADAKMMVNT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS49 MENMLLWLIFFTPGWTLIDGSEMEWDFMWHLRKVPRIVSERTFHLTSPAFEADAKMMVNT
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KE6 VCGIECQKELPTPSLSELEDYLSYETVFENGTRTLTRVKVQDLVLEPTQNITTKGVSVRR
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS49 VCGIECQKELPTPSLSELEDYLSYETVFENGTRTLTRVKVQDLVLEPTQNITTKGVSVRR
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KE6 KRQVYGTDSRFSILDKRFLTNFPFSTAVKLSTGCSGILISPQHVLTAAHCVHDGKDYVKG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS49 KRQVYGTDSRFSILDKRFLTNFPFSTAVKLSTGCSGILISPQHVLTAAHCVHDGKDYVKG
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KE6 SKKLRVGLLKMRNKSGGKKRRGSKRSRREASGGDQREGTREHLQERAKGGRRRKKSGRGQ
       :::::::::::::::::::::::::::::::::::::::::::.::::::::::::::::
CCDS49 SKKLRVGLLKMRNKSGGKKRRGSKRSRREASGGDQREGTREHLRERAKGGRRRKKSGRGQ
              190       200       210       220       230       240

              250       260       270       280       290       300
pF1KE6 RIAEGRPSFQWTRVKNTHIPKGWARGGMGDATLDYDYALLELKRAHKKKYMELGISPTIK
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS49 RIAEGRPSFQWTRVKNTHIPKGWARGGMGDATLDYDYALLELKRAHKKKYMELGISPTIK
              250       260       270       280       290       300

              310       320       330       340       350       360
pF1KE6 KMPGGMIHFSGFDNDRADQLVYRFCSVSDESNDLLYQYCDAESGSTGSGVYLRLKDPDKK
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS49 KMPGGMIHFSGFDNDRADQLVYRFCSVSDESNDLLYQYCDAESGSTGSGVYLRLKDPDKK
              310       320       330       340       350       360

              370       380       390       400       410   
pF1KE6 NWKRKIIAVYSGHQWVDVHGVQKDYNVAVRITPLKYAQICLWIHGNDANCAYG
       :::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS49 NWKRKIIAVYSGHQWVDVHGVQKDYNVAVRITPLKYAQICLWIHGNDANCAYG
              370       380       390       400       410   

>>CCDS8278.1 PRSS23 gene_id:11098|Hs108|chr11             (383 aa)
 initn: 1368 init1: 789 opt: 805  Z-score: 792.3  bits: 155.5 E(32554): 8.2e-38
Smith-Waterman score: 1332; 48.8% identity (69.8% similar) in 414 aa overlap (5-413:7-383)

                 10         20        30        40        50       
pF1KE6   MENMLLWLIFFTP-GWTLIDGSEMEWDFMWHLRKVPRIVSERTFHLTSPAFEADAKMM
             ::.:.::   .   ..     :   :   ..: .. . :..:..: : :.::. 
CCDS82 MAGIPGLLFLLFFLLCAVGQVSPYSAPWKPTWPAYRLPVVLPQSTLNLAKPDFGAEAKLE
               10        20        30        40        50        60

        60        70        80        90       100           110   
pF1KE6 VNTVCGIECQKELPTPSLSELEDYLSYETVFENGTRTLTRVKVQDLVLEPT----QNITT
       :.. :: .:.:  : :.  : ..::::::.. ::.:: :.: .  :         ..  .
CCDS82 VSSSCGPQCHKGTPLPTYEEAKQYLSYETLYANGSRTETQVGIYILSSSGDGAQHRDSGS
               70        80        90       100       110       120

           120       130       140       150       160       170   
pF1KE6 KGVSVRRKRQVYGTDSRFSILDKRFLTNFPFSTAVKLSTGCSGILISPQHVLTAAHCVHD
       .: : :::::.:: ::::::. : :: :.::::.:::::::.: :.. .::::::::.::
CCDS82 SGKS-RRKRQIYGYDSRFSIFGKDFLLNYPFSTSVKLSTGCTGTLVAEKHVLTAAHCIHD
               130       140       150       160       170         

           180       190       200       210       220       230   
pF1KE6 GKDYVKGSKKLRVGLLKMRNKSGGKKRRGSKRSRREASGGDQREGTREHLQERAKGGRRR
       :: ::::..:::::.:: . :.::   ::.. :                . :. :     
CCDS82 GKTYVKGTQKLRVGFLKPKFKDGG---RGANDSTSA-------------MPEQMK-----
     180       190       200          210                          

           240       250       260       270       280       290   
pF1KE6 KKSGRGQRIAEGRPSFQWTRVKNTHIPKGWARGGMGDATLDYDYALLELKRAHKKKYMEL
                      ::: ::: ::.:::: .:. .:  .::::::::::. ::.:.:..
CCDS82 ---------------FQWIRVKRTHVPKGWIKGNANDIGMDYDYALLELKKPHKRKFMKI
                     220       230       240       250       260   

           300       310       320       330       340       350   
pF1KE6 GISPTIKKMPGGMIHFSGFDNDRADQLVYRFCSVSDESNDLLYQYCDAESGSTGSGVYLR
       :.::  :..::: :::::.::::  .::::::.:.::. ::::: :::. :..:::::.:
CCDS82 GVSPPAKQLPGGRIHFSGYDNDRPGNLVYRFCDVKDETYDLLYQQCDAQPGASGSGVYVR
           270       280       290       300       310       320   

           360       370       380       390       400       410   
pF1KE6 LKDPDKKNWKRKIIAVYSGHQWVDVHGVQKDYNVAVRITPLKYAQICLWIHGNDANCAYG
       .   ....:.::::...:::::::..:  .:.::::::::::::::: ::.::  .:  :
CCDS82 MWKRQQQKWERKIIGIFSGHQWVDMNGSPQDFNVAVRITPLKYAQICYWIKGNYLDCREG
           330       340       350       360       370       380   




413 residues in 1 query   sequences
18511270 residues in 32554 library sequences
 Tcomplib [36.3.4 Apr, 2011] (8 proc)
 start: Tue Nov  8 12:53:45 2016 done: Tue Nov  8 12:53:45 2016
 Total Scan time:  2.550 Total Display time: -0.020

Function used was FASTA [36.3.4 Apr, 2011]