Result of FASTA (ccds) for
pFN21AE6370
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KE6370, 326 aa
1>>>pF1KE6370 326 - 326 aa - 326 aa
Library: human.CCDS.faa
18511270 residues in 32554 sequences
Statistics: Expectation_n fit: rho(ln(x))= 5.0629+/-0.000665; mu= 17.8962+/- 0.040
mean_var=68.1652+/-13.792, 0's: 0 Z-trim(111.2): 179 B-trim: 667 in 1/48
Lambda= 0.155343
statistics sampled from 11999 (12180) to 11999 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.726), E-opt: 0.2 (0.374), width: 16
Scan time: 2.530
The best scores are: opt bits E(32554)
CCDS1563.1 PRSS38 gene_id:339501|Hs108|chr1 ( 326) 2266 516.2 1.4e-146
CCDS47145.1 PRSS48 gene_id:345062|Hs108|chr4 ( 328) 662 156.7 2.3e-38
CCDS10481.1 PRSS22 gene_id:64063|Hs108|chr16 ( 317) 652 154.5 1.1e-37
CCDS73391.1 TMPRSS5 gene_id:80975|Hs108|chr11 ( 413) 652 154.6 1.3e-37
CCDS73392.1 TMPRSS5 gene_id:80975|Hs108|chr11 ( 448) 652 154.6 1.4e-37
CCDS44735.1 TMPRSS5 gene_id:80975|Hs108|chr11 ( 457) 652 154.6 1.4e-37
CCDS10430.1 TPSG1 gene_id:25823|Hs108|chr16 ( 321) 645 152.9 3.2e-37
CCDS55788.1 TMPRSS13 gene_id:84000|Hs108|chr11 ( 532) 638 151.5 1.4e-36
CCDS58185.1 TMPRSS13 gene_id:84000|Hs108|chr11 ( 563) 638 151.5 1.5e-36
CCDS41721.1 TMPRSS13 gene_id:84000|Hs108|chr11 ( 567) 638 151.5 1.5e-36
CCDS45469.1 PRSS8 gene_id:5652|Hs108|chr16 ( 343) 633 150.3 2.1e-36
CCDS3847.1 F11 gene_id:2160|Hs108|chr4 ( 625) 636 151.1 2.2e-36
CCDS34120.1 KLKB1 gene_id:3818|Hs108|chr4 ( 638) 633 150.4 3.5e-36
CCDS58790.1 TMPRSS3 gene_id:64699|Hs108|chr21 ( 453) 625 148.5 9.2e-36
CCDS74856.1 TMPRSS6 gene_id:164656|Hs108|chr22 ( 802) 626 148.9 1.2e-35
CCDS13941.1 TMPRSS6 gene_id:164656|Hs108|chr22 ( 811) 626 148.9 1.3e-35
CCDS13686.1 TMPRSS3 gene_id:64699|Hs108|chr21 ( 454) 614 146.1 5.1e-35
CCDS33564.1 TMPRSS2 gene_id:7113|Hs108|chr21 ( 492) 613 145.9 6.4e-35
CCDS54486.1 TMPRSS2 gene_id:7113|Hs108|chr21 ( 529) 613 145.9 6.7e-35
CCDS10431.1 TPSAB1 gene_id:7177|Hs108|chr16 ( 275) 588 140.1 2e-33
CCDS5279.1 PLG gene_id:5340|Hs108|chr6 ( 810) 586 140.0 6.2e-33
CCDS76482.1 TMPRSS4 gene_id:56649|Hs108|chr11 ( 290) 578 137.9 9.6e-33
CCDS53717.1 TMPRSS4 gene_id:56649|Hs108|chr11 ( 397) 578 138.0 1.2e-32
CCDS44743.1 TMPRSS4 gene_id:56649|Hs108|chr11 ( 432) 578 138.0 1.3e-32
CCDS53716.1 TMPRSS4 gene_id:56649|Hs108|chr11 ( 435) 578 138.0 1.3e-32
CCDS31684.1 TMPRSS4 gene_id:56649|Hs108|chr11 ( 437) 578 138.0 1.3e-32
CCDS12088.1 TMPRSS9 gene_id:360200|Hs108|chr19 (1059) 560 134.2 4.4e-31
CCDS10852.1 CTRL gene_id:1506|Hs108|chr16 ( 264) 552 132.0 5.1e-31
CCDS43129.2 TMPRSS7 gene_id:344805|Hs108|chr3 ( 717) 551 132.1 1.3e-30
CCDS13571.1 TMPRSS15 gene_id:5651|Hs108|chr21 (1019) 552 132.4 1.5e-30
CCDS3518.1 TMPRSS11D gene_id:9407|Hs108|chr4 ( 418) 542 129.9 3.5e-30
CCDS46816.1 PRSS42 gene_id:339906|Hs108|chr3 ( 293) 540 129.4 3.6e-30
CCDS5976.1 PRSS55 gene_id:203074|Hs108|chr8 ( 352) 540 129.4 4.1e-30
CCDS47065.1 TMPRSS11A gene_id:339967|Hs108|chr4 ( 418) 540 129.5 4.7e-30
CCDS3519.1 TMPRSS11A gene_id:339967|Hs108|chr4 ( 421) 540 129.5 4.7e-30
CCDS44881.1 TMPRSS12 gene_id:283471|Hs108|chr12 ( 348) 532 127.6 1.4e-29
CCDS3521.1 TMPRSS11B gene_id:132724|Hs108|chr4 ( 416) 531 127.5 1.9e-29
CCDS32490.1 CTRB1 gene_id:1504|Hs108|chr16 ( 263) 526 126.2 2.9e-29
CCDS75122.1 CORIN gene_id:10699|Hs108|chr4 ( 938) 530 127.5 4.2e-29
CCDS3477.1 CORIN gene_id:10699|Hs108|chr4 (1042) 530 127.5 4.6e-29
CCDS32489.1 CTRB2 gene_id:440387|Hs108|chr16 ( 263) 519 124.6 8.5e-29
CCDS74669.1 PRSS56 gene_id:646960|Hs108|chr2 ( 603) 517 124.4 2.2e-28
CCDS33993.1 TMPRSS11E gene_id:28983|Hs108|chr4 ( 423) 507 122.1 8e-28
CCDS8487.1 ST14 gene_id:6768|Hs108|chr11 ( 855) 505 121.8 1.9e-27
CCDS73602.1 F7 gene_id:2155|Hs108|chr13 ( 382) 494 119.1 5.6e-27
CCDS9529.1 F7 gene_id:2155|Hs108|chr13 ( 444) 494 119.2 6.3e-27
CCDS9528.1 F7 gene_id:2155|Hs108|chr13 ( 466) 494 119.2 6.5e-27
CCDS10476.1 PRSS27 gene_id:83886|Hs108|chr16 ( 290) 485 117.0 1.8e-26
CCDS3369.1 HGFAC gene_id:3083|Hs108|chr4 ( 655) 488 118.0 2.2e-26
CCDS75098.1 HGFAC gene_id:3083|Hs108|chr4 ( 662) 488 118.0 2.2e-26
>>CCDS1563.1 PRSS38 gene_id:339501|Hs108|chr1 (326 aa)
initn: 2266 init1: 2266 opt: 2266 Z-score: 2745.1 bits: 516.2 E(32554): 1.4e-146
Smith-Waterman score: 2266; 99.4% identity (99.7% similar) in 326 aa overlap (1-326:1-326)
10 20 30 40 50 60
pF1KE6 MAAPASVMGPLGPSALGLLLLLLVVAPPRVAALVHRQPENQGISLTGSVACGRPSMEGKI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS15 MAAPASVMGPLGPSALGLLLLLLVVAPPRVAALVHRQPENQGISLTGSVACGRPSMEGKI
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE6 LGGVPAPERKWPWQVSVHYAGLHVCGGSILNEYWVLSAAHCFHRDKNIKIYDMYVGLVNL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS15 LGGVPAPERKWPWQVSVHYAGLHVCGGSILNEYWVLSAAHCFHRDKNIKIYDMYVGLVNL
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE6 RVDGNHTQWYEVNRVILHPTYEMYHPIGGDVALVQLKTRIVFSESVLPVCLATPEVNLTS
:: :::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS15 RVAGNHTQWYEVNRVILHPTYEMYHPIGGDVALVQLKTRIVFSESVLPVCLATPEVNLTS
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE6 ANCWATGWGLVSKQGETSDELQEVQLPLILEPWCHLLYGHMSYIMPDMLCAGDILNAKTV
:::::::::::::::::::::::.::::::::::::::::::::::::::::::::::::
CCDS15 ANCWATGWGLVSKQGETSDELQEMQLPLILEPWCHLLYGHMSYIMPDMLCAGDILNAKTV
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE6 CEGDSGGPLVCEFNRSWLQIGIVSWGRGCSNPLYPGVYASVSYFSKWICDNIEITPTPAQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS15 CEGDSGGPLVCEFNRSWLQIGIVSWGRGCSNPLYPGVYASVSYFSKWICDNIEITPTPAQ
250 260 270 280 290 300
310 320
pF1KE6 PAPALSPALGPTLSVLMAMLAGWSVL
::::::::::::::::::::::::::
CCDS15 PAPALSPALGPTLSVLMAMLAGWSVL
310 320
>>CCDS47145.1 PRSS48 gene_id:345062|Hs108|chr4 (328 aa)
initn: 638 init1: 214 opt: 662 Z-score: 802.3 bits: 156.7 E(32554): 2.3e-38
Smith-Waterman score: 662; 36.7% identity (68.0% similar) in 259 aa overlap (45-292:13-266)
20 30 40 50 60 70
pF1KE6 ALGLLLLLLVVAPPRVAALVHRQPENQGISLTGSVACGRPSMEGKILGGVPAPERKWPWQ
: : .::.: . ....:: : .::::
CCDS47 MGPAGCAFTLLLLLGISVCGQPVYSSRVVGGQDAAAGRWPWQ
10 20 30 40
80 90 100 110 120 130
pF1KE6 VSVHYAGLHVCGGSILNEYWVLSAAHCFHRDKNIKIYDMYVGLVNLRVDGNHTQWYEVNR
::.:. .::::...: .:.::::.. . : ...: ... :. . : :..
CCDS47 VSLHFDHNFICGGSLVSERLILTAAHCIQPTWTTFSYTVWLGSITVG-DSRKRVKYYVSK
50 60 70 80 90 100
140 150 160 170 180 190
pF1KE6 VILHPTYEMYHPIGGDVALVQLKTRIVFSESVLPVCLATPEVNLTSAN-CWATGWGLVSK
...:: :. .::::..:.....:. ..::.:: . .:. ::.:::: :..
CCDS47 IVIHPKYQ---DTTADVALLKLSSQVTFTSAILPICLPSVTKQLAIPPFCWVTGWGKVKE
110 120 130 140 150
200 210 220 230 240
pF1KE6 QGETS--DELQEVQLPLILEPWCHLLYGHMSYIMP--------DMLCAGDILNAKTVCEG
... . . :::...:.: . :. ::. .. ..: : .:::: : : :.:
CCDS47 SSDRDYHSALQEAEVPIIDRQACEQLYNPIGIFLPALEPVIKEDKICAGDTQNMKDSCKG
160 170 180 190 200 210
250 260 270 280 290 300
pF1KE6 DSGGPLVCEFNRSWLQIGIVSWGRGCSNPLYPGVYASVSYFSKWICDNIEITPTPAQPAP
:::::: :... :.: :.:::: :.. : ::::..: :..::: .:
CCDS47 DSGGPLSCHIDGVWIQTGVVSWGLECGKSL-PGVYTNVIYYQKWINATISRANNLDFSDF
220 230 240 250 260 270
310 320
pF1KE6 ALSPALGPTLSVLMAMLAGWSVL
CCDS47 LFPIVLLSLALLRPSCAFGPNTIHRVGTVAEAVACIQGWEENAWRFSPRGR
280 290 300 310 320
>>CCDS10481.1 PRSS22 gene_id:64063|Hs108|chr16 (317 aa)
initn: 631 init1: 252 opt: 652 Z-score: 790.4 bits: 154.5 E(32554): 1.1e-37
Smith-Waterman score: 652; 36.1% identity (61.8% similar) in 288 aa overlap (11-288:10-285)
10 20 30 40 50
pF1KE6 MAAPASVMGPLGPSALGLLLLLLVVAPPRV--AALVHRQPENQGISLTGSVACGRPSMEG
:: . :: . ::..: . :: . : :::.:.. .
CCDS10 MVVSGAPPALGGGCLGTFTSLLLLASTAILNAARIPVPP-----------ACGKPQQLN
10 20 30 40
60 70 80 90 100 110
pF1KE6 KILGGVPAPERKWPWQVSVHYAGLHVCGGSILNEYWVLSAAHCFHRDKNIK-IYDMYVGL
...:: . . .::: ::.. : : :.::.:. ::..:::::. . : .... .:
CCDS10 RVVGGEDSTDSEWPWIVSIQKNGTHHCAGSLLTSRWVITAAHCFKDNLNKPYLFSVLLGA
50 60 70 80 90 100
120 130 140 150 160 170
pF1KE6 VNLRVDGNHTQWYEVNRVILHPTYEMYHPIGGDVALVQLKTRIVFSESVLPVCLATPEVN
.: :...: : : ::.: . .:.:::.:. : ::: :::.:: ..
CCDS10 WQLGNPGSRSQKVGVAWVEPHPVYSWKEGACADIALVRLERSIQFSERVLPICLPDASIH
110 120 130 140 150 160
180 190 200 210 220 230
pF1KE6 LT-SANCWATGWGLVSKQG---ETSDELQEVQLPLILEPWCHLLY---GHMSYIMPDMLC
: ...:: .::: . ..: . ::....:.: : :: . .. : ::::
CCDS10 LPPNTHCWISGWGSI-QDGVPLPHPQTLQKLKVPIIDSEVCSHLYWRGAGQGPITEDMLC
170 180 190 200 210 220
240 250 260 270 280 290
pF1KE6 AGDILNAKTVCEGDSGGPLVCEFNRSWLQIGIVSWGRGCSNPLYPGVYASVSYFSKWICD
:: . . . .: :::::::.:. . .:: ::.:::.::.. :::: :.: .:.
CCDS10 AGYLEGERDACLGDSGGPLMCQVDGAWLLAGIISWGEGCAERNRPGVYISLSAHRSWVEK
230 240 250 260 270 280
300 310 320
pF1KE6 NIEITPTPAQPAPALSPALGPTLSVLMAMLAGWSVL
CCDS10 IVQGVQLRGRAQGGGALRAPSQGSGAAARS
290 300 310
>>CCDS73391.1 TMPRSS5 gene_id:80975|Hs108|chr11 (413 aa)
initn: 578 init1: 313 opt: 652 Z-score: 788.8 bits: 154.6 E(32554): 1.3e-37
Smith-Waterman score: 652; 38.3% identity (65.0% similar) in 277 aa overlap (28-293:136-409)
10 20 30 40 50
pF1KE6 MAAPASVMGPLGPSALGLLLLLLVVAPPRVAALVHR--QPEN-----QGISLTGSVA
::....... ::.: : .:: :
CCDS73 SLGHLRLTHHKGVNLTDIKLNSSQEFAQLSPRLGGFLEEAWQPRNNCTSGQVVSLRCS-E
110 120 130 140 150 160
60 70 80 90 100
pF1KE6 CGRPSMEGKILGGVPAPERKWPWQVSVHYAGLHVCGGSILNEYWVLSAAHCFH--RDKNI
:: . ..:.:: . .::::.:: . :.::::.: ::..::::.: : .
CCDS73 CGARPLASRIVGGQSVAPGRWPWQASVALGFRHTCGGSVLAPRWVVTAAHCMHSFRLARL
170 180 190 200 210 220
110 120 130 140 150 160
pF1KE6 KIYDMYVGLVNLRVDGNHTQWYEVNRVILHPTYEMYHPIGGDVALVQLKTRIVFSESVLP
. . ...:::. . : : :.:.: :: : . ::::..:.: . ::..:
CCDS73 SSWRVHAGLVSHSAVRPH-QGALVERIIPHPLYSAQNH-DYDVALLRLQTALNFSDTVGA
230 240 250 260 270 280
170 180 190 200 210 220
pF1KE6 VCLATPEVNLTSAN-CWATGWGLVS-KQGETSDELQEVQLPLILEPWCHLLYGHMSYIMP
::: . : .. ... ::..::: . .. .:: ::.. .::. :. . . . :
CCDS73 VCLPAKEQHFPKGSRCWVSGWGHTHPSHTYSSDMLQDTVVPLFSTQLCNSSCVYSGALTP
290 300 310 320 330 340
230 240 250 260 270 280
pF1KE6 DMLCAGDILNAKTVCEGDSGGPLVCEFNRSWLQIGIVSWGRGCSNPLYPGVYASVSYFSK
::::: . . .:.::::::::: . .: .:.:::::::..: .:::::.:. :
CCDS73 RMLCAGYLDGRADACQGDSGGPLVCPDGDTWRLVGVVSWGRGCAEPNHPGVYAKVAEFLD
350 360 370 380 390 400
290 300 310 320
pF1KE6 WICDNIEITPTPAQPAPALSPALGPTLSVLMAMLAGWSVL
:: :. .
CCDS73 WIHDTAQDSLL
410
>>CCDS73392.1 TMPRSS5 gene_id:80975|Hs108|chr11 (448 aa)
initn: 578 init1: 313 opt: 652 Z-score: 788.3 bits: 154.6 E(32554): 1.4e-37
Smith-Waterman score: 652; 38.3% identity (65.0% similar) in 277 aa overlap (28-293:171-444)
10 20 30 40 50
pF1KE6 MAAPASVMGPLGPSALGLLLLLLVVAPPRVAALVHR--QPEN-----QGISLTGSVA
::....... ::.: : .:: :
CCDS73 SLGHLRLTHHKGVNLTDIKLNSSQEFAQLSPRLGGFLEEAWQPRNNCTSGQVVSLRCS-E
150 160 170 180 190
60 70 80 90 100
pF1KE6 CGRPSMEGKILGGVPAPERKWPWQVSVHYAGLHVCGGSILNEYWVLSAAHCFH--RDKNI
:: . ..:.:: . .::::.:: . :.::::.: ::..::::.: : .
CCDS73 CGARPLASRIVGGQSVAPGRWPWQASVALGFRHTCGGSVLAPRWVVTAAHCMHSFRLARL
200 210 220 230 240 250
110 120 130 140 150 160
pF1KE6 KIYDMYVGLVNLRVDGNHTQWYEVNRVILHPTYEMYHPIGGDVALVQLKTRIVFSESVLP
. . ...:::. . : : :.:.: :: : . ::::..:.: . ::..:
CCDS73 SSWRVHAGLVSHSAVRPH-QGALVERIIPHPLYSAQNH-DYDVALLRLQTALNFSDTVGA
260 270 280 290 300 310
170 180 190 200 210 220
pF1KE6 VCLATPEVNLTSAN-CWATGWGLVS-KQGETSDELQEVQLPLILEPWCHLLYGHMSYIMP
::: . : .. ... ::..::: . .. .:: ::.. .::. :. . . . :
CCDS73 VCLPAKEQHFPKGSRCWVSGWGHTHPSHTYSSDMLQDTVVPLFSTQLCNSSCVYSGALTP
320 330 340 350 360 370
230 240 250 260 270 280
pF1KE6 DMLCAGDILNAKTVCEGDSGGPLVCEFNRSWLQIGIVSWGRGCSNPLYPGVYASVSYFSK
::::: . . .:.::::::::: . .: .:.:::::::..: .:::::.:. :
CCDS73 RMLCAGYLDGRADACQGDSGGPLVCPDGDTWRLVGVVSWGRGCAEPNHPGVYAKVAEFLD
380 390 400 410 420 430
290 300 310 320
pF1KE6 WICDNIEITPTPAQPAPALSPALGPTLSVLMAMLAGWSVL
:: :. .
CCDS73 WIHDTAQDSLL
440
>>CCDS44735.1 TMPRSS5 gene_id:80975|Hs108|chr11 (457 aa)
initn: 578 init1: 313 opt: 652 Z-score: 788.1 bits: 154.6 E(32554): 1.4e-37
Smith-Waterman score: 652; 38.3% identity (65.0% similar) in 277 aa overlap (28-293:180-453)
10 20 30 40 50
pF1KE6 MAAPASVMGPLGPSALGLLLLLLVVAPPRVAALVHR--QPEN-----QGISLTGSVA
::....... ::.: : .:: :
CCDS44 SLGHLRLTHHKGVNLTDIKLNSSQEFAQLSPRLGGFLEEAWQPRNNCTSGQVVSLRCS-E
150 160 170 180 190 200
60 70 80 90 100
pF1KE6 CGRPSMEGKILGGVPAPERKWPWQVSVHYAGLHVCGGSILNEYWVLSAAHCFH--RDKNI
:: . ..:.:: . .::::.:: . :.::::.: ::..::::.: : .
CCDS44 CGARPLASRIVGGQSVAPGRWPWQASVALGFRHTCGGSVLAPRWVVTAAHCMHSFRLARL
210 220 230 240 250 260
110 120 130 140 150 160
pF1KE6 KIYDMYVGLVNLRVDGNHTQWYEVNRVILHPTYEMYHPIGGDVALVQLKTRIVFSESVLP
. . ...:::. . : : :.:.: :: : . ::::..:.: . ::..:
CCDS44 SSWRVHAGLVSHSAVRPH-QGALVERIIPHPLYSAQNH-DYDVALLRLQTALNFSDTVGA
270 280 290 300 310 320
170 180 190 200 210 220
pF1KE6 VCLATPEVNLTSAN-CWATGWGLVS-KQGETSDELQEVQLPLILEPWCHLLYGHMSYIMP
::: . : .. ... ::..::: . .. .:: ::.. .::. :. . . . :
CCDS44 VCLPAKEQHFPKGSRCWVSGWGHTHPSHTYSSDMLQDTVVPLFSTQLCNSSCVYSGALTP
330 340 350 360 370 380
230 240 250 260 270 280
pF1KE6 DMLCAGDILNAKTVCEGDSGGPLVCEFNRSWLQIGIVSWGRGCSNPLYPGVYASVSYFSK
::::: . . .:.::::::::: . .: .:.:::::::..: .:::::.:. :
CCDS44 RMLCAGYLDGRADACQGDSGGPLVCPDGDTWRLVGVVSWGRGCAEPNHPGVYAKVAEFLD
390 400 410 420 430 440
290 300 310 320
pF1KE6 WICDNIEITPTPAQPAPALSPALGPTLSVLMAMLAGWSVL
:: :. .
CCDS44 WIHDTAQDSLL
450
>>CCDS10430.1 TPSG1 gene_id:25823|Hs108|chr16 (321 aa)
initn: 597 init1: 223 opt: 645 Z-score: 781.8 bits: 152.9 E(32554): 3.2e-37
Smith-Waterman score: 649; 37.5% identity (59.6% similar) in 317 aa overlap (15-320:2-297)
10 20 30 40 50
pF1KE6 MAAPASVMGPLGPSALGLLLLLLVVAPPRVAALVHRQPENQGISLTGSVACGRPSME---
::: :::..: : :. : :: .::::..
CCDS10 MALGACGLLLLLAVPGVS-LRTLQP-----------GCGRPQVSDAG
10 20 30
60 70 80 90 100 110
pF1KE6 GKILGGVPAPERKWPWQVSVHYAGLHVCGGSILNEYWVLSAAHCFHRDKNIKIYDMYVGL
:.:.:: :: ::::.:.. .::::::.:. :::.::::: . : . :....:
CCDS10 GRIVGGHAAPAGAWPWQASLRLRRVHVCGGSLLSPQWVLTAAHCFSGSLNSSDYQVHLGE
40 50 60 70 80 90
120 130 140 150 160 170
pF1KE6 VNLRVDGNHTQWYEVNRVILHPTYEMYHPIGGDVALVQLKTRIVFSESVLPVCLATPEVN
... .. . . : ..::: . .::.:::.:.. ...: .::::: ::..
CCDS10 LEITLSPHFST---VRQIILHSSPSGQPGTSGDIALVELSVPVTLSSRILPVCL--PEAS
100 110 120 130 140 150
180 190 200 210 220
pF1KE6 ---LTSANCWATGWGLVSKQGETSDE---LQEVQLPLILEPWCHLLY-GHMSYIM-PDML
. ::.:::: ...:: :.::.. .. :. : : . :. ::::
CCDS10 DDFCPGIRCWVTGWGY-TREGEPLPPPYSLREVKVSVVDTETCRRDYPGPGGSILQPDML
160 170 180 190 200
230 240 250 260 270 280
pF1KE6 CAGDILNAKTVCEGDSGGPLVCEFNRSWLQIGIVSWGRGCSNPLYPGVYASVSYFSKWIC
:: .: :. ::::::::. : .:.: : ::::.::. : ::::. : . .::
CCDS10 CARGPGDA---CQDDSGGPLVCQVNGAWVQAGTVSWGEGCGRPNRPGVYTRVPAYVNWIR
210 220 230 240 250 260
290 300 310 320
pF1KE6 DNIEITPTPAQPAPALSPALGPTLSVLMAMLAGWSVL
.: . . : : : : :. .:
CCDS10 RHITASGGSESGYPRLPLLAGFFLPGLFLLLVSCVLLAKCLLHPSADGTPFPAPD
270 280 290 300 310 320
>>CCDS55788.1 TMPRSS13 gene_id:84000|Hs108|chr11 (532 aa)
initn: 476 init1: 441 opt: 638 Z-score: 770.3 bits: 151.5 E(32554): 1.4e-36
Smith-Waterman score: 638; 37.6% identity (65.0% similar) in 266 aa overlap (34-293:264-524)
10 20 30 40 50 60
pF1KE6 PASVMGPLGPSALGLLLLLLVVAPPRVAALVHRQ--PENQGISLTGSVACGRPSMEGKIL
.::. : .. ::: : :: .: :.:.
CCDS55 ESAHRTTEVAHRDFANSFSILRYNSTIQESLHRSECPSQRYISLQCS-HCGLRAMTGRIV
240 250 260 270 280 290
70 80 90 100 110
pF1KE6 GGVPAPERKWPWQVSVHYAGLHVCGGSILNEYWVLSAAHCFH--RDKNIKIYDMYVGLVN
::. : . :::::::.:.. :.:::.... :::.::::: :.: .. . .:.: :
CCDS55 GGALASDSKWPWQVSLHFGTTHICGGTLIDAQWVLTAAHCFFVTREKVLEGWKVYAGTSN
300 310 320 330 340 350
120 130 140 150 160 170
pF1KE6 LRVDGNHTQWYEVNRVILHPTYEMYHPIGGDVALVQLKTRIVFSESVLPVCLATPEVNLT
:. . . . ..:.. .: . :.::..:. ...: . :.:: ...
CCDS55 LH---QLPEAASIAEIIINSNYTDEED-DYDIALMRLSKPLTLSAHIHPACLPMHGQTFS
360 370 380 390 400
180 190 200 210 220 230
pF1KE6 -SANCWATGWGLVSKQGE-TSDELQEVQLPLILEPWCHLLYGHMSYIMPDMLCAGDILNA
. .:: ::.: . . . :: :.:::. :: :. . ::. : :.::::. ..
CCDS55 LNETCWITGFGKTRETDDKTSPFLREVQVNLIDFKKCNDYLVYDSYLTPRMMCAGDLRGG
410 420 430 440 450 460
240 250 260 270 280 290
pF1KE6 KTVCEGDSGGPLVCEFNRSWLQIGIVSWGRGCSNPLYPGVYASVSYFSKWICDNIEITPT
. :.:::::::::: : : :..::: ::.. ::::..:. :: ...:
CCDS55 RDSCQGDSGGPLVCEQNNRWYLAGVTSWGTGCGQRNKPGVYTKVTEVLPWIYSKMESEVR
470 480 490 500 510 520
300 310 320
pF1KE6 PAQPAPALSPALGPTLSVLMAMLAGWSVL
CCDS55 FRKS
530
>>CCDS58185.1 TMPRSS13 gene_id:84000|Hs108|chr11 (563 aa)
initn: 476 init1: 441 opt: 638 Z-score: 769.9 bits: 151.5 E(32554): 1.5e-36
Smith-Waterman score: 638; 37.6% identity (65.0% similar) in 266 aa overlap (34-293:299-559)
10 20 30 40 50 60
pF1KE6 PASVMGPLGPSALGLLLLLLVVAPPRVAALVHRQ--PENQGISLTGSVACGRPSMEGKIL
.::. : .. ::: : :: .: :.:.
CCDS58 ESAHRTTEVAHRDFANSFSILRYNSTIQESLHRSECPSQRYISLQCS-HCGLRAMTGRIV
270 280 290 300 310 320
70 80 90 100 110
pF1KE6 GGVPAPERKWPWQVSVHYAGLHVCGGSILNEYWVLSAAHCFH--RDKNIKIYDMYVGLVN
::. : . :::::::.:.. :.:::.... :::.::::: :.: .. . .:.: :
CCDS58 GGALASDSKWPWQVSLHFGTTHICGGTLIDAQWVLTAAHCFFVTREKVLEGWKVYAGTSN
330 340 350 360 370 380
120 130 140 150 160 170
pF1KE6 LRVDGNHTQWYEVNRVILHPTYEMYHPIGGDVALVQLKTRIVFSESVLPVCLATPEVNLT
:. . . . ..:.. .: . :.::..:. ...: . :.:: ...
CCDS58 LH---QLPEAASIAEIIINSNYTDEED-DYDIALMRLSKPLTLSAHIHPACLPMHGQTFS
390 400 410 420 430 440
180 190 200 210 220 230
pF1KE6 -SANCWATGWGLVSKQGE-TSDELQEVQLPLILEPWCHLLYGHMSYIMPDMLCAGDILNA
. .:: ::.: . . . :: :.:::. :: :. . ::. : :.::::. ..
CCDS58 LNETCWITGFGKTRETDDKTSPFLREVQVNLIDFKKCNDYLVYDSYLTPRMMCAGDLRGG
450 460 470 480 490 500
240 250 260 270 280 290
pF1KE6 KTVCEGDSGGPLVCEFNRSWLQIGIVSWGRGCSNPLYPGVYASVSYFSKWICDNIEITPT
. :.:::::::::: : : :..::: ::.. ::::..:. :: ...:
CCDS58 RDSCQGDSGGPLVCEQNNRWYLAGVTSWGTGCGQRNKPGVYTKVTEVLPWIYSKMESSAG
510 520 530 540 550 560
300 310 320
pF1KE6 PAQPAPALSPALGPTLSVLMAMLAGWSVL
>>CCDS41721.1 TMPRSS13 gene_id:84000|Hs108|chr11 (567 aa)
initn: 476 init1: 441 opt: 638 Z-score: 769.9 bits: 151.5 E(32554): 1.5e-36
Smith-Waterman score: 638; 37.6% identity (65.0% similar) in 266 aa overlap (34-293:299-559)
10 20 30 40 50 60
pF1KE6 PASVMGPLGPSALGLLLLLLVVAPPRVAALVHRQ--PENQGISLTGSVACGRPSMEGKIL
.::. : .. ::: : :: .: :.:.
CCDS41 ESAHRTTEVAHRDFANSFSILRYNSTIQESLHRSECPSQRYISLQCS-HCGLRAMTGRIV
270 280 290 300 310 320
70 80 90 100 110
pF1KE6 GGVPAPERKWPWQVSVHYAGLHVCGGSILNEYWVLSAAHCFH--RDKNIKIYDMYVGLVN
::. : . :::::::.:.. :.:::.... :::.::::: :.: .. . .:.: :
CCDS41 GGALASDSKWPWQVSLHFGTTHICGGTLIDAQWVLTAAHCFFVTREKVLEGWKVYAGTSN
330 340 350 360 370 380
120 130 140 150 160 170
pF1KE6 LRVDGNHTQWYEVNRVILHPTYEMYHPIGGDVALVQLKTRIVFSESVLPVCLATPEVNLT
:. . . . ..:.. .: . :.::..:. ...: . :.:: ...
CCDS41 LH---QLPEAASIAEIIINSNYTDEED-DYDIALMRLSKPLTLSAHIHPACLPMHGQTFS
390 400 410 420 430 440
180 190 200 210 220 230
pF1KE6 -SANCWATGWGLVSKQGE-TSDELQEVQLPLILEPWCHLLYGHMSYIMPDMLCAGDILNA
. .:: ::.: . . . :: :.:::. :: :. . ::. : :.::::. ..
CCDS41 LNETCWITGFGKTRETDDKTSPFLREVQVNLIDFKKCNDYLVYDSYLTPRMMCAGDLRGG
450 460 470 480 490 500
240 250 260 270 280 290
pF1KE6 KTVCEGDSGGPLVCEFNRSWLQIGIVSWGRGCSNPLYPGVYASVSYFSKWICDNIEITPT
. :.:::::::::: : : :..::: ::.. ::::..:. :: ...:
CCDS41 RDSCQGDSGGPLVCEQNNRWYLAGVTSWGTGCGQRNKPGVYTKVTEVLPWIYSKMESEVR
510 520 530 540 550 560
300 310 320
pF1KE6 PAQPAPALSPALGPTLSVLMAMLAGWSVL
CCDS41 FRKS
326 residues in 1 query sequences
18511270 residues in 32554 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Tue Nov 8 12:33:07 2016 done: Tue Nov 8 12:33:08 2016
Total Scan time: 2.530 Total Display time: 0.020
Function used was FASTA [36.3.4 Apr, 2011]