Result of FASTA (ccds) for
pFN21AE6362
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KE6362, 337 aa
1>>>pF1KE6362 337 - 337 aa - 337 aa
Library: human.CCDS.faa
18511270 residues in 32554 sequences
Statistics: Expectation_n fit: rho(ln(x))= 5.4459+/-0.00095; mu= 14.8898+/- 0.057
mean_var=61.2899+/-12.456, 0's: 0 Z-trim(104.1): 14 B-trim: 0 in 0/51
Lambda= 0.163825
statistics sampled from 7723 (7731) to 7723 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.612), E-opt: 0.2 (0.237), width: 16
Scan time: 1.830
The best scores are: opt bits E(32554)
CCDS7610.1 SFXN4 gene_id:119559|Hs108|chr10 ( 337) 2213 531.7 3.2e-151
CCDS1922.1 SFXN5 gene_id:94097|Hs108|chr2 ( 340) 414 106.5 3.2e-23
CCDS4394.1 SFXN1 gene_id:94081|Hs108|chr5 ( 322) 312 82.4 5.4e-16
CCDS7539.1 SFXN2 gene_id:118980|Hs108|chr10 ( 322) 283 75.6 6.3e-14
CCDS7508.2 SFXN3 gene_id:81855|Hs108|chr10 ( 325) 280 74.9 1e-13
>>CCDS7610.1 SFXN4 gene_id:119559|Hs108|chr10 (337 aa)
initn: 2213 init1: 2213 opt: 2213 Z-score: 2828.5 bits: 531.7 E(32554): 3.2e-151
Smith-Waterman score: 2213; 100.0% identity (100.0% similar) in 337 aa overlap (1-337:1-337)
10 20 30 40 50 60
pF1KE6 MSLEQEEETQPGRLLGRRDAVPAFIEPNVRFWITERQSFIRRFLQWTELLDPTNVFISVE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS76 MSLEQEEETQPGRLLGRRDAVPAFIEPNVRFWITERQSFIRRFLQWTELLDPTNVFISVE
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE6 SIENSRQLLCTNEDVSSPASADQRIQEAWKRSLATVHPDSSNLIPKLFRPAAFLPFMAPT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS76 SIENSRQLLCTNEDVSSPASADQRIQEAWKRSLATVHPDSSNLIPKLFRPAAFLPFMAPT
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE6 VFLSMTPLKGIKSVILPQVFLCAYMAAFNSINGNRSYTCKPLERSLLMAGAVASSTFLGV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS76 VFLSMTPLKGIKSVILPQVFLCAYMAAFNSINGNRSYTCKPLERSLLMAGAVASSTFLGV
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE6 IPQFVQMKYGLTGPWIKRLLPVIFLVQASGMNVYMSRSLESIKGIAVMDKEGNVLGHSRI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS76 IPQFVQMKYGLTGPWIKRLLPVIFLVQASGMNVYMSRSLESIKGIAVMDKEGNVLGHSRI
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE6 AGTKAVRETLASRIVLFGTSALIPEVFTYFFKRTQYFRKNPGSLWILKLSCTVLAMGLMV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS76 AGTKAVRETLASRIVLFGTSALIPEVFTYFFKRTQYFRKNPGSLWILKLSCTVLAMGLMV
250 260 270 280 290 300
310 320 330
pF1KE6 PFSFSIFPQIGQIQYCSLEEKIQSPTEETEIFYHRGV
:::::::::::::::::::::::::::::::::::::
CCDS76 PFSFSIFPQIGQIQYCSLEEKIQSPTEETEIFYHRGV
310 320 330
>>CCDS1922.1 SFXN5 gene_id:94097|Hs108|chr2 (340 aa)
initn: 399 init1: 230 opt: 414 Z-score: 530.5 bits: 106.5 E(32554): 3.2e-23
Smith-Waterman score: 414; 28.0% identity (59.8% similar) in 328 aa overlap (19-337:21-340)
10 20 30 40 50
pF1KE6 MSLEQEEETQPGRLLGRRDAVPAFIEPNVRFWITERQSFIRRFLQWTELLDPTNVFIS
:: : : . :: .. :: :: .. ...:: ..:..
CCDS19 MADTATTASAAAASAASASSDA-PPFQLGKPRF---QQTSFYGRFRHFLDIIDPRTLFVT
10 20 30 40 50
60 70 80 90 100 110
pF1KE6 VESIENSRQLLCTNEDVS-SPASADQRIQEAWKRSLATVHPDSSNLIPKLFRPAAFLPFM
. .... ::: . . :. ..... : : . : .:::... : :: ....::
CCDS19 ERRLREAVQLLEDYKHGTLRPGVTNEQLWSAQKIKQAILHPDTNEKIFMPFRMSGYIPFG
60 70 80 90 100 110
120 130 140 150 160 170
pF1KE6 APTVFLSMTPLKGIKSVILPQVFLCAYMAAFNSINGNRSYTCKPLERSLLMAG---AVAS
.: : . : . . :... : . .. : : : : . :: : .. : :: :
CCDS19 TPIVVGLLLPNQTLASTVFWQWLNQSHNACVNYANRNAT---KPSPASKFIQGYLGAVIS
120 130 140 150 160 170
180 190 200 210 220 230
pF1KE6 STFLGVIPQFVQMKYGLTGP----WIKRLLPVIFLVQASGMNVYMSRSLESIKGIAVMDK
.. ..: . . .: . : :.:..: ...:. :: . : : .:: :.:.
CCDS19 AVSIAVGLNVLVQKANKFTPATRLLIQRFVPFPAVASANICNVVLMRYGELEEGIDVLDS
180 190 200 210 220 230
240 250 260 270 280
pF1KE6 EGNVLGHSRIAGTKAVRETLASRIVLFGTSALIPEVFTYFFKRTQYFRKNPGSLW-ILKL
.::..: :.::. .:. :: .:.:: ..: . ....: .. : : . .:
CCDS19 DGNLVGSSKIAARHALLETALTRVVLPMPILVLPPIVMSMLEKTALLQARPRLLLPVQSL
240 250 260 270 280 290
290 300 310 320 330
pF1KE6 SCTVLAMGLMVPFSFSIFPQIGQIQYCSLEEKIQSPTEETEIFYHRGV
: . :.:: .:...:.:::...:. .:: .: . : . :..:.
CCDS19 VC-LAAFGLALPLAISLFPQMSEIETSQLEPEIAQATSSRTVVYNKGL
300 310 320 330 340
>>CCDS4394.1 SFXN1 gene_id:94081|Hs108|chr5 (322 aa)
initn: 237 init1: 160 opt: 312 Z-score: 400.6 bits: 82.4 E(32554): 5.4e-16
Smith-Waterman score: 312; 22.0% identity (58.4% similar) in 327 aa overlap (25-337:5-322)
10 20 30 40 50
pF1KE6 MSLEQEEETQPGRLLGRRDAVPAFIEPNVRF----WITERQSFIRRFLQWTELLDPTNVF
. ::. . : ....:: : .. . :: :..
CCDS43 MSGELPPNINIKEPRW--DQSTFIGRANHFFTVTDPRNIL
10 20 30
60 70 80 90 100 110
pF1KE6 ISVESIENSRQLLCT-NEDVSSPASADQRIQEAWKRSLATVHPDSSNLIPKLFRPAAFLP
.. :..:..:... . . :. ..... .: .. :::... . . : .: .:
CCDS43 LTNEQLESARKIVHDYRQGIVPPGLTENELWRAKYIYDSAFHPDTGEKMILIGRMSAQVP
40 50 60 70 80 90
120 130 140 150 160 170
pF1KE6 FMAPTVFLSMTPLKGIKSVILPQVFLCAYMAAFNSIN--GNRSYTCKPLERSLLMA--GA
. . :: . .:.. : . .. :. : : :. : . : . . : ::
CCDS43 MNMTITGCMMTFYRTTPAVLFWQWINQSFNAVVNYTNRSGDAPLTVNELGTAYVSATTGA
100 110 120 130 140 150
180 190 200 210 220 230
pF1KE6 VASSTFLGVIPQFVQMKYGLTGPWIKRLLPVIFLVQASGMNVYMSRSLESIKGIAVMDKE
::.. :... . :. : : :..: .. :. .:. . :. : :: : :..
CCDS43 VATALGLNALTKHVS-------PLIGRFVPFAAVAAANCINIPLMRQRELKVGIPVTDEN
160 170 180 190 200 210
240 250 260 270 280 290
pF1KE6 GNVLGHSRIAGTKAVRETLASRIVLFGTSALIPEVFTYFFKRTQYFRKNPGSLWILKLSC
:: ::.: :. .:. ....:::.. . . :: . ... .... : ....
CCDS43 GNRLGESANAAKQAITQVVVSRILMAAPGMAIPPFIMNTLEKKAFLKRFPWMSAPIQVGL
220 230 240 250 260 270
300 310 320 330
pF1KE6 TVLAMGLMVPFSFSIFPQIGQIQYCSLEEKIQSPTEETE-----IFYHRGV
. . . . .:. ..::: .... ::: ..:. .:.. .....:.
CCDS43 VGFCLVFATPLCCALFPQKSSMSVTSLEAELQAKIQESHPELRRVYFNKGL
280 290 300 310 320
>>CCDS7539.1 SFXN2 gene_id:118980|Hs108|chr10 (322 aa)
initn: 220 init1: 144 opt: 283 Z-score: 363.5 bits: 75.6 E(32554): 6.3e-14
Smith-Waterman score: 283; 22.9% identity (56.7% similar) in 319 aa overlap (32-337:15-322)
10 20 30 40 50 60
pF1KE6 SLEQEEETQPGRLLGRRDAVPAFIEPNVRFWITERQSFIRRFLQWTELLDPTNVFISVES
: ....:. : .. .. :: .::.: .
CCDS75 MEADLSGFNIDAPRW--DQRTFLGRVKHFLNITDPRTVFVSERE
10 20 30 40
70 80 90 100 110
pF1KE6 IENSRQLLCTNE-DVSSPASADQRIQEAWKRSLATVHPDSSNLIPKLFRPAAFLPF-MAP
.. .. .. .. : :.. ... : : .. :::... . . : . :: :
CCDS75 LDWAKVMVEKSRMGVVPPGTQVEQLLYAKKLYDSAFHPDTGEKMNVIGRMSFQLPGGMII
50 60 70 80 90 100
120 130 140 150 160 170
pF1KE6 TVFLSMTPLKGIKSVILPQVFLCAYMAAFNSINGNRSY--TCKPLERSLLMAGAVASSTF
: :. . . . .::. : .. : : : : . . . . : . : ..: .:
CCDS75 TGFM-LQFYRTMPAVIFWQWVNQSFNALVNYTNRNAASPTSVRQMALSYFTATTTAVATA
110 120 130 140 150 160
180 190 200 210 220 230
pF1KE6 LGVIPQFVQMKYGLTGPWIKRLLPVIFLVQASGMNVYMSRSLESIKGIAVMDKEGNVLGH
.: . .... :.: :. : .. :. .:. : :. : :::: : :.. : .::
CCDS75 VG-MNMLTKKAPPLVGRWV----PFAAVAAANCVNIPMMRQQELIKGICVKDRNENEIGH
170 180 190 200 210
240 250 260 270 280 290
pF1KE6 SRIAGTKAVRETLASRIVLFGTSALIPEVFTYFFKRTQYFRKNP---GSLWILKLSCTVL
:: :.. .. ... :::.. . . .. :. ... ....: . : .. .: ..
CCDS75 SRRAAAIGITQVVISRITMSAPGMILLPVIMERLEKLHFMQKVKVLHAPLQVMLSGCFLI
220 230 240 250 260 270
300 310 320 330
pF1KE6 AMGLMVPFSFSIFPQIGQIQYCSLEEKIQSPTE------ETEIFYHRGV
.::: . ..::: .. :: :.:. . : .....:.
CCDS75 ---FMVPVACGLFPQKCELPVSYLEPKLQDTIKAKYGELEPYVYFNKGL
280 290 300 310 320
>>CCDS7508.2 SFXN3 gene_id:81855|Hs108|chr10 (325 aa)
initn: 169 init1: 138 opt: 280 Z-score: 359.6 bits: 74.9 E(32554): 1e-13
Smith-Waterman score: 280; 21.7% identity (56.6% similar) in 318 aa overlap (32-337:19-325)
10 20 30 40 50 60
pF1KE6 SLEQEEETQPGRLLGRRDAVPAFIEPNVRFWITERQSFIRRFLQWTELLDPTNVFISVES
: ....:. : .. . :: :...: .
CCDS75 MESKMGELPLDINIQEPRW--DQSTFLGRARHFFTVTDPRNLLLSGAQ
10 20 30 40
70 80 90 100 110 120
pF1KE6 IENSRQLLCTNE-DVSSPASADQRIQEAWKRSLATVHPDSSNLIPKLFRPAAFLPFMAPT
.: ::... . . : .:. ..... .: .. :::... . . : .: .:.
CCDS75 LEASRNIVQNYRAGVVTPGITEDQLWRAKYVYDSAFHPDTGEKVVLIGRMSAQVPMNMTI
50 60 70 80 90 100
130 140 150 160 170
pF1KE6 VFLSMTPLKGIKSVILPQVFLCAYMAAFNSIN--GNRSYTCKPLERSLLMAGAVASSTFL
. .: . .:.. : .. : : : :. : . : . . : . : .: :
CCDS75 TGCMLTFYRKTPTVVFWQWVNQSFNAIVNYSNRSGDTPITVRQLGTAYVSATTGAVATAL
110 120 130 140 150 160
180 190 200 210 220 230
pF1KE6 GVIPQFVQMKYGLTGPWIKRLLPVIFLVQASGMNVYMSRSLESIKGIAVMDKEGNVLGHS
:. .. : . :..: .. :. .:. . :. : :: : :. :. ::.:
CCDS75 GLKSLTKHLP-----PLVGRFVPFAAVAAANCINIPLMRQRELQVGIPVADEAGQRLGYS
170 180 190 200 210 220
240 250 260 270 280 290
pF1KE6 RIAGTKAVRETLASRIVLFGTSALIPEVFTYFFKRTQYFRKNPGSLWI---LKLSCTVLA
:. ... ... ::: . . :: .. ... ..... : :. :... . .
CCDS75 VTAAKQGIFQVVISRICMAIPAMAIPPLIMDTLEKKDFLKRRP---WLGAPLQVGLVGFC
230 240 250 260 270
300 310 320 330
pF1KE6 MGLMVPFSFSIFPQIGQIQYCSLEEKI------QSPTEETEIFYHRGV
. . .:. ..::: ..:. .:: .. :.:. :. ..:..:.
CCDS75 LVFATPLCCALFPQKSSIHISNLEPELRAQIHEQNPSVEV-VYYNKGL
280 290 300 310 320
337 residues in 1 query sequences
18511270 residues in 32554 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Tue Nov 8 12:28:26 2016 done: Tue Nov 8 12:28:26 2016
Total Scan time: 1.830 Total Display time: 0.010
Function used was FASTA [36.3.4 Apr, 2011]