Result of FASTA (ccds) for
pFN21AE6346
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KE6346, 432 aa
1>>>pF1KE6346 432 - 432 aa - 432 aa
Library: human.CCDS.faa
18511270 residues in 32554 sequences
Statistics: Expectation_n fit: rho(ln(x))= 4.9654+/-0.000773; mu= 18.8344+/- 0.047
mean_var=55.9743+/-11.468, 0's: 0 Z-trim(107.0): 32 B-trim: 0 in 0/48
Lambda= 0.171427
statistics sampled from 9311 (9328) to 9311 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.646), E-opt: 0.2 (0.287), width: 16
Scan time: 2.230
The best scores are: opt bits E(32554)
CCDS34462.1 SLC35B2 gene_id:347734|Hs108|chr6 ( 432) 2859 715.1 3.3e-206
CCDS75463.1 SLC35B2 gene_id:347734|Hs108|chr6 ( 383) 2508 628.3 4e-180
CCDS69127.1 SLC35B2 gene_id:347734|Hs108|chr6 ( 339) 2019 507.3 9.1e-144
CCDS75462.1 SLC35B2 gene_id:347734|Hs108|chr6 ( 299) 1933 486.0 2.1e-137
CCDS11552.2 SLC35B1 gene_id:10237|Hs108|chr17 ( 359) 465 123.0 4.8e-28
CCDS4508.1 SLC35B3 gene_id:51000|Hs108|chr6 ( 401) 253 70.6 3.2e-12
>>CCDS34462.1 SLC35B2 gene_id:347734|Hs108|chr6 (432 aa)
initn: 2859 init1: 2859 opt: 2859 Z-score: 3815.7 bits: 715.1 E(32554): 3.3e-206
Smith-Waterman score: 2859; 100.0% identity (100.0% similar) in 432 aa overlap (1-432:1-432)
10 20 30 40 50 60
pF1KE6 MDARWWAVVVLAAFPSLGAGGETPEAPPESWTQLWFFRFVVNAAGYASFMVPGYLLVQYF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS34 MDARWWAVVVLAAFPSLGAGGETPEAPPESWTQLWFFRFVVNAAGYASFMVPGYLLVQYF
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE6 RRKNYLETGRGLCFPLVKACVFGNEPKASDEVPLAPRTEAAETTPMWQALKLLFCATGLQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS34 RRKNYLETGRGLCFPLVKACVFGNEPKASDEVPLAPRTEAAETTPMWQALKLLFCATGLQ
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE6 VSYLTWGVLQERVMTRSYGATATSPGERFTDSQFLVLMNRVLALIVAGLSCVLCKQPRHG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS34 VSYLTWGVLQERVMTRSYGATATSPGERFTDSQFLVLMNRVLALIVAGLSCVLCKQPRHG
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE6 APMYRYSFASLSNVLSSWCQYEALKFVSFPTQVLAKASKVIPVMLMGKLVSRRSYEHWEY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS34 APMYRYSFASLSNVLSSWCQYEALKFVSFPTQVLAKASKVIPVMLMGKLVSRRSYEHWEY
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE6 LTATLISIGVSMFLLSSGPEPRSSPATTLSGLILLAGYIAFDSFTSNWQDALFAYKMSSV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS34 LTATLISIGVSMFLLSSGPEPRSSPATTLSGLILLAGYIAFDSFTSNWQDALFAYKMSSV
250 260 270 280 290 300
310 320 330 340 350 360
pF1KE6 QMMFGVNFFSCLFTVGSLLEQGALLEGTRFMGRHSEFAAHALLLSICSACGQLFIFYTIG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS34 QMMFGVNFFSCLFTVGSLLEQGALLEGTRFMGRHSEFAAHALLLSICSACGQLFIFYTIG
310 320 330 340 350 360
370 380 390 400 410 420
pF1KE6 QFGAAVFTIIMTLRQAFAILLSCLLYGHTVTVVGGLGVAVVFAALLLRVYARGRLKQRGK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS34 QFGAAVFTIIMTLRQAFAILLSCLLYGHTVTVVGGLGVAVVFAALLLRVYARGRLKQRGK
370 380 390 400 410 420
430
pF1KE6 KAVPVESPVQKV
::::::::::::
CCDS34 KAVPVESPVQKV
430
>>CCDS75463.1 SLC35B2 gene_id:347734|Hs108|chr6 (383 aa)
initn: 2508 init1: 2508 opt: 2508 Z-score: 3347.3 bits: 628.3 E(32554): 4e-180
Smith-Waterman score: 2508; 100.0% identity (100.0% similar) in 383 aa overlap (50-432:1-383)
20 30 40 50 60 70
pF1KE6 GGETPEAPPESWTQLWFFRFVVNAAGYASFMVPGYLLVQYFRRKNYLETGRGLCFPLVKA
::::::::::::::::::::::::::::::
CCDS75 MVPGYLLVQYFRRKNYLETGRGLCFPLVKA
10 20 30
80 90 100 110 120 130
pF1KE6 CVFGNEPKASDEVPLAPRTEAAETTPMWQALKLLFCATGLQVSYLTWGVLQERVMTRSYG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS75 CVFGNEPKASDEVPLAPRTEAAETTPMWQALKLLFCATGLQVSYLTWGVLQERVMTRSYG
40 50 60 70 80 90
140 150 160 170 180 190
pF1KE6 ATATSPGERFTDSQFLVLMNRVLALIVAGLSCVLCKQPRHGAPMYRYSFASLSNVLSSWC
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS75 ATATSPGERFTDSQFLVLMNRVLALIVAGLSCVLCKQPRHGAPMYRYSFASLSNVLSSWC
100 110 120 130 140 150
200 210 220 230 240 250
pF1KE6 QYEALKFVSFPTQVLAKASKVIPVMLMGKLVSRRSYEHWEYLTATLISIGVSMFLLSSGP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS75 QYEALKFVSFPTQVLAKASKVIPVMLMGKLVSRRSYEHWEYLTATLISIGVSMFLLSSGP
160 170 180 190 200 210
260 270 280 290 300 310
pF1KE6 EPRSSPATTLSGLILLAGYIAFDSFTSNWQDALFAYKMSSVQMMFGVNFFSCLFTVGSLL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS75 EPRSSPATTLSGLILLAGYIAFDSFTSNWQDALFAYKMSSVQMMFGVNFFSCLFTVGSLL
220 230 240 250 260 270
320 330 340 350 360 370
pF1KE6 EQGALLEGTRFMGRHSEFAAHALLLSICSACGQLFIFYTIGQFGAAVFTIIMTLRQAFAI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS75 EQGALLEGTRFMGRHSEFAAHALLLSICSACGQLFIFYTIGQFGAAVFTIIMTLRQAFAI
280 290 300 310 320 330
380 390 400 410 420 430
pF1KE6 LLSCLLYGHTVTVVGGLGVAVVFAALLLRVYARGRLKQRGKKAVPVESPVQKV
:::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS75 LLSCLLYGHTVTVVGGLGVAVVFAALLLRVYARGRLKQRGKKAVPVESPVQKV
340 350 360 370 380
>>CCDS69127.1 SLC35B2 gene_id:347734|Hs108|chr6 (339 aa)
initn: 2019 init1: 2019 opt: 2019 Z-score: 2694.5 bits: 507.3 E(32554): 9.1e-144
Smith-Waterman score: 2019; 100.0% identity (100.0% similar) in 312 aa overlap (121-432:28-339)
100 110 120 130 140 150
pF1KE6 EVPLAPRTEAAETTPMWQALKLLFCATGLQVSYLTWGVLQERVMTRSYGATATSPGERFT
::::::::::::::::::::::::::::::
CCDS69 MLLAMPALWYLATSWCSTSGGRTTWRPVSYLTWGVLQERVMTRSYGATATSPGERFT
10 20 30 40 50
160 170 180 190 200 210
pF1KE6 DSQFLVLMNRVLALIVAGLSCVLCKQPRHGAPMYRYSFASLSNVLSSWCQYEALKFVSFP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS69 DSQFLVLMNRVLALIVAGLSCVLCKQPRHGAPMYRYSFASLSNVLSSWCQYEALKFVSFP
60 70 80 90 100 110
220 230 240 250 260 270
pF1KE6 TQVLAKASKVIPVMLMGKLVSRRSYEHWEYLTATLISIGVSMFLLSSGPEPRSSPATTLS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS69 TQVLAKASKVIPVMLMGKLVSRRSYEHWEYLTATLISIGVSMFLLSSGPEPRSSPATTLS
120 130 140 150 160 170
280 290 300 310 320 330
pF1KE6 GLILLAGYIAFDSFTSNWQDALFAYKMSSVQMMFGVNFFSCLFTVGSLLEQGALLEGTRF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS69 GLILLAGYIAFDSFTSNWQDALFAYKMSSVQMMFGVNFFSCLFTVGSLLEQGALLEGTRF
180 190 200 210 220 230
340 350 360 370 380 390
pF1KE6 MGRHSEFAAHALLLSICSACGQLFIFYTIGQFGAAVFTIIMTLRQAFAILLSCLLYGHTV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS69 MGRHSEFAAHALLLSICSACGQLFIFYTIGQFGAAVFTIIMTLRQAFAILLSCLLYGHTV
240 250 260 270 280 290
400 410 420 430
pF1KE6 TVVGGLGVAVVFAALLLRVYARGRLKQRGKKAVPVESPVQKV
::::::::::::::::::::::::::::::::::::::::::
CCDS69 TVVGGLGVAVVFAALLLRVYARGRLKQRGKKAVPVESPVQKV
300 310 320 330
>>CCDS75462.1 SLC35B2 gene_id:347734|Hs108|chr6 (299 aa)
initn: 1933 init1: 1933 opt: 1933 Z-score: 2580.4 bits: 486.0 E(32554): 2.1e-137
Smith-Waterman score: 1933; 100.0% identity (100.0% similar) in 299 aa overlap (134-432:1-299)
110 120 130 140 150 160
pF1KE6 TPMWQALKLLFCATGLQVSYLTWGVLQERVMTRSYGATATSPGERFTDSQFLVLMNRVLA
::::::::::::::::::::::::::::::
CCDS75 MTRSYGATATSPGERFTDSQFLVLMNRVLA
10 20 30
170 180 190 200 210 220
pF1KE6 LIVAGLSCVLCKQPRHGAPMYRYSFASLSNVLSSWCQYEALKFVSFPTQVLAKASKVIPV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS75 LIVAGLSCVLCKQPRHGAPMYRYSFASLSNVLSSWCQYEALKFVSFPTQVLAKASKVIPV
40 50 60 70 80 90
230 240 250 260 270 280
pF1KE6 MLMGKLVSRRSYEHWEYLTATLISIGVSMFLLSSGPEPRSSPATTLSGLILLAGYIAFDS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS75 MLMGKLVSRRSYEHWEYLTATLISIGVSMFLLSSGPEPRSSPATTLSGLILLAGYIAFDS
100 110 120 130 140 150
290 300 310 320 330 340
pF1KE6 FTSNWQDALFAYKMSSVQMMFGVNFFSCLFTVGSLLEQGALLEGTRFMGRHSEFAAHALL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS75 FTSNWQDALFAYKMSSVQMMFGVNFFSCLFTVGSLLEQGALLEGTRFMGRHSEFAAHALL
160 170 180 190 200 210
350 360 370 380 390 400
pF1KE6 LSICSACGQLFIFYTIGQFGAAVFTIIMTLRQAFAILLSCLLYGHTVTVVGGLGVAVVFA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS75 LSICSACGQLFIFYTIGQFGAAVFTIIMTLRQAFAILLSCLLYGHTVTVVGGLGVAVVFA
220 230 240 250 260 270
410 420 430
pF1KE6 ALLLRVYARGRLKQRGKKAVPVESPVQKV
:::::::::::::::::::::::::::::
CCDS75 ALLLRVYARGRLKQRGKKAVPVESPVQKV
280 290
>>CCDS11552.2 SLC35B1 gene_id:10237|Hs108|chr17 (359 aa)
initn: 339 init1: 183 opt: 465 Z-score: 617.0 bits: 123.0 E(32554): 4.8e-28
Smith-Waterman score: 465; 30.7% identity (59.7% similar) in 345 aa overlap (75-416:19-356)
50 60 70 80 90 100
pF1KE6 GYASFMVPGYLLVQYFRRKNYLETGRGLCFPLVKACVFGNEPKASDEVPLAPRTEAAETT
::. . : .. : .: . : :. ..
CCDS11 MRPLPPVGDVRLELSPPPPLLPVPVVSGSPVGS-----SGRLMASSSS
10 20 30 40
110 120 130 140 150 160
pF1KE6 PMWQALKLLFCATGLQVSYLTWGVLQERVMTRSYGATATSPGERFTDSQFLVLMNRVLAL
. . :.: .: :. : :. .:.:::.. .:: : . : :: . ::... :.
CCDS11 LVPDRLRLPLCFLGVFVCYFYYGILQEKITRGKYGEGAKQ--ETFTFALTLVFIQCVINA
50 60 70 80 90 100
170 180 190 200 210 220
pF1KE6 IVAGLSCVLCKQPR-HGAPMYRYSFASLSNVLSSWCQYEALKFVSFPTQVLAKASKVIPV
. : . . : . . :. :.: . . . ::.::..:::::.:. : :::
CCDS11 VFAKILIQFFDTARVDRTRSWLYAACSISYLGAMVSSNSALQFVNYPTQVLGKSCKPIPV
110 120 130 140 150 160
230 240 250 260 270 280
pF1KE6 MLMGKLVSRRSYEHWEYLTATLISIGVSMFLLSSGPEPRSSPATTLSGLILLAGYIAFDS
::.: . ...: .:: . :: ::..:. . :. : .:: ...:.
CCDS11 MLLGVTLLKKKYPLAKYLCVLLIVAGVALFMYKPKKVVGIEEHTVGYGELLLLLSLTLDG
170 180 190 200 210 220
290 300 310 320 330 340
pF1KE6 FTSNWQDALFA-YKMSSVQMMFGVNFFSCLFTVGSLLEQGALLEGTRFMGRHSEFAAHAL
.:. :: . : :. .: .::...:..: :. ..: : : : : :. . . :
CCDS11 LTGVSQDHMRAHYQTGSNHMMLNINLWSTLLLGMGILFTGELWEFLSFAERYPAIIYNIL
230 240 250 260 270 280
350 360 370 380 390 400
pF1KE6 LLSICSACGQLFIFYTIGQFGAAVFTIIMTLRQAFAILLSCLLYGHTVTVVGGLGVAVVF
:... :: :: :::.:. :: . .:: : :. :.:: : .:... .. . .:...::
CCDS11 LFGLTSALGQSFIFMTVVYFGPLTCSIITTTRKFFTILASVILFANPISPMQWVGTVLVF
290 300 310 320 330 340
410 420 430
pF1KE6 AALLLRV-YARGRLKQRGKKAVPVESPVQKV
.: : . ...: :
CCDS11 LGLGLDAKFGKGAKKTSH
350
>>CCDS4508.1 SLC35B3 gene_id:51000|Hs108|chr6 (401 aa)
initn: 161 init1: 83 opt: 253 Z-score: 333.0 bits: 70.6 E(32554): 3.2e-12
Smith-Waterman score: 283; 24.0% identity (59.4% similar) in 313 aa overlap (111-418:80-377)
90 100 110 120 130 140
pF1KE6 VFGNEPKASDEVPLAPRTEAAETTPMWQALKLLFCATGLQVSYLTWGVLQERVMTRSYGA
....:..:. : :: .: ::: ...
CCDS45 SKTQTMSPHIKSVDDVVVLGMNLSKFNKLTQFFICVAGVFVFYLIYGYLQELIFS-----
50 60 70 80 90 100
150 160 170 180 190 200
pF1KE6 TATSPGERFTDSQFLVLMNRVLALIVAGLSCVLCKQPRHGAPMYRYSFASLSNVLSSWCQ
: . . . .:.:.. .. : . . : .. :. : : . .. .: . .
CCDS45 ---VEGFK-SCGWYLTLVQFAFYSIFGLIELQLIQDKRRRIPGKTYMIIAFLTVGTMGLS
110 120 130 140 150 160
210 220 230 240 250 260
pF1KE6 YEALKFVSFPTQVLAKASKVIPVMLMGKLVSRRSYEHWEYLTATLISIGVSMFLLSSGPE
.: ....::::. : :.::::: : ... . :. . .: .:.:. : :. .
CCDS45 NTSLGYLNYPTQVIFKCCKLIPVMLGGVFIQGKRYNVADVSAAICMSLGLIWFTLA---D
170 180 190 200 210
270 280 290 300 310
pF1KE6 PRSSPATTLSGLILLAGYIAFDSFTSNWQD-ALFAYKMSSVQMMFGVNFFSCLFTVGSLL
..: .:.:..:.. . :. .: :. :. .. :. .:.. .. .. . .:
CCDS45 STTAPNFNLTGVVLISLALCADAVIGNVQEKAMKLHNASNSEMVLYSYSIGFVYILLGLT
220 230 240 250 260 270
320 330 340 350 360 370
pF1KE6 EQGALLEGTRFMGRHS-EFAAHALLLSICSACGQLFIFYTIGQFGAAVFTIIMTLRQAFA
..: .. : ... . ..:.:.:. . : :.. : ::: . . . : :.:..
CCDS45 CTSGLGPAVTFCAKNPVRTYGYAFLFSLTGYFGISFVLALIKIFGALIAVTVTTGRKAMT
280 290 300 310 320 330
380 390 400 410 420 430
pF1KE6 ILLSCLLYGHTVT---VVGGLGVAVVFAALLLRVYARGRLKQRGKKAVPVESPVQKV
:.:: ..... : : .:: .: ...: ::... : :
CCDS45 IVLSFIFFAKPFTFQYVWSGL---LVVLGIFLNVYSKNMDKIRLPSLYDLINKSVEARKS
340 350 360 370 380 390
CCDS45 RTLAQTV
400
432 residues in 1 query sequences
18511270 residues in 32554 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Tue Nov 8 12:19:42 2016 done: Tue Nov 8 12:19:43 2016
Total Scan time: 2.230 Total Display time: 0.030
Function used was FASTA [36.3.4 Apr, 2011]