FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448

Query: pF1KE6317, 313 aa
  1>>>pF1KE6317 313 - 313 aa - 313 aa
Library: human.CCDS.faa
  18511270 residues in 32554 sequences

Statistics:  Expectation_n fit: rho(ln(x))= 5.6259+/-0.000782; mu= 14.2349+/- 0.047
 mean_var=69.4824+/-14.282, 0's: 0 Z-trim(108.0): 28  B-trim: 408 in 1/49
 Lambda= 0.153864
 statistics sampled from 9907 (9930) to 9907 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
 ktup: 2, E-join: 1 (0.688), E-opt: 0.2 (0.305), width:  16
 Scan time:  2.550

The best scores are:                                      opt bits E(32554)
CCDS46902.1 MGLL gene_id:11343|Hs108|chr3          ( 313) 2083 471.2 4.6e-133
CCDS43148.1 MGLL gene_id:11343|Hs108|chr3          ( 303) 2013 455.6 2.1e-128
CCDS58852.1 MGLL gene_id:11343|Hs108|chr3          ( 283) 1170 268.5 4.3e-72


>>CCDS46902.1 MGLL gene_id:11343|Hs108|chr3               (313 aa)
 initn: 2083 init1: 2083 opt: 2083  Z-score: 2502.3  bits: 471.2 E(32554): 4.6e-133
Smith-Waterman score: 2083; 100.0% identity (100.0% similar) in 313 aa overlap (1-313:1-313)

               10        20        30        40        50        60
pF1KE6 METGPEDPSSMPEESSPRRTPQSIPYQDLPHLVNADGQYLFCRYWKPTGTPKALIFVSHG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS46 METGPEDPSSMPEESSPRRTPQSIPYQDLPHLVNADGQYLFCRYWKPTGTPKALIFVSHG
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KE6 AGEHSGRYEELARMLMGLDLLVFAHDHVGHGQSEGERMVVSDFHVFVRDVLQHVDSMQKD
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS46 AGEHSGRYEELARMLMGLDLLVFAHDHVGHGQSEGERMVVSDFHVFVRDVLQHVDSMQKD
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KE6 YPGLPVFLLGHSMGGAIAILTAAERPGHFAGMVLISPLVLANPESATTFKVLAAKVLNLV
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS46 YPGLPVFLLGHSMGGAIAILTAAERPGHFAGMVLISPLVLANPESATTFKVLAAKVLNLV
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KE6 LPNLSLGPIDSSVLSRNKTEVDIYNSDPLICRAGLKVCFGIQLLNAVSRVERALPKLTVP
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS46 LPNLSLGPIDSSVLSRNKTEVDIYNSDPLICRAGLKVCFGIQLLNAVSRVERALPKLTVP
              190       200       210       220       230       240

              250       260       270       280       290       300
pF1KE6 FLLLQGSADRLCDSKGAYLLMELAKSQDKTLKIYEGAYHVLHKELPEVTNSVFHEINMWV
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS46 FLLLQGSADRLCDSKGAYLLMELAKSQDKTLKIYEGAYHVLHKELPEVTNSVFHEINMWV
              250       260       270       280       290       300

              310   
pF1KE6 SQRTATAGTASPP
       :::::::::::::
CCDS46 SQRTATAGTASPP
              310   

>>CCDS43148.1 MGLL gene_id:11343|Hs108|chr3               (303 aa)
 initn: 2013 init1: 2013 opt: 2013  Z-score: 2418.6  bits: 455.6 E(32554): 2.1e-128
Smith-Waterman score: 2013; 100.0% identity (100.0% similar) in 303 aa overlap (11-313:1-303)

               10        20        30        40        50        60
pF1KE6 METGPEDPSSMPEESSPRRTPQSIPYQDLPHLVNADGQYLFCRYWKPTGTPKALIFVSHG
                 ::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS43           MPEESSPRRTPQSIPYQDLPHLVNADGQYLFCRYWKPTGTPKALIFVSHG
                         10        20        30        40        50

               70        80        90       100       110       120
pF1KE6 AGEHSGRYEELARMLMGLDLLVFAHDHVGHGQSEGERMVVSDFHVFVRDVLQHVDSMQKD
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS43 AGEHSGRYEELARMLMGLDLLVFAHDHVGHGQSEGERMVVSDFHVFVRDVLQHVDSMQKD
               60        70        80        90       100       110

              130       140       150       160       170       180
pF1KE6 YPGLPVFLLGHSMGGAIAILTAAERPGHFAGMVLISPLVLANPESATTFKVLAAKVLNLV
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS43 YPGLPVFLLGHSMGGAIAILTAAERPGHFAGMVLISPLVLANPESATTFKVLAAKVLNLV
              120       130       140       150       160       170

              190       200       210       220       230       240
pF1KE6 LPNLSLGPIDSSVLSRNKTEVDIYNSDPLICRAGLKVCFGIQLLNAVSRVERALPKLTVP
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS43 LPNLSLGPIDSSVLSRNKTEVDIYNSDPLICRAGLKVCFGIQLLNAVSRVERALPKLTVP
              180       190       200       210       220       230

              250       260       270       280       290       300
pF1KE6 FLLLQGSADRLCDSKGAYLLMELAKSQDKTLKIYEGAYHVLHKELPEVTNSVFHEINMWV
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS43 FLLLQGSADRLCDSKGAYLLMELAKSQDKTLKIYEGAYHVLHKELPEVTNSVFHEINMWV
              240       250       260       270       280       290

              310   
pF1KE6 SQRTATAGTASPP
       :::::::::::::
CCDS43 SQRTATAGTASPP
              300   

>>CCDS58852.1 MGLL gene_id:11343|Hs108|chr3               (283 aa)
 initn: 1170 init1: 1170 opt: 1170  Z-score: 1407.7  bits: 268.5 E(32554): 4.3e-72
Smith-Waterman score: 1836; 90.4% identity (90.4% similar) in 313 aa overlap (1-313:1-283)

               10        20        30        40        50        60
pF1KE6 METGPEDPSSMPEESSPRRTPQSIPYQDLPHLVNADGQYLFCRYWKPTGTPKALIFVSHG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS58 METGPEDPSSMPEESSPRRTPQSIPYQDLPHLVNADGQYLFCRYWKPTGTPKALIFVSHG
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KE6 AGEHSGRYEELARMLMGLDLLVFAHDHVGHGQSEGERMVVSDFHVFVRDVLQHVDSMQKD
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS58 AGEHSGRYEELARMLMGLDLLVFAHDHVGHGQSEGERMVVSDFHVFVRDVLQHVDSMQKD
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KE6 YPGLPVFLLGHSMGGAIAILTAAERPGHFAGMVLISPLVLANPESATTFKVLAAKVLNLV
       :::::::::::::::::::::::::::::::::::::::::::::::::::         
CCDS58 YPGLPVFLLGHSMGGAIAILTAAERPGHFAGMVLISPLVLANPESATTFKV---------
              130       140       150       160       170          

              190       200       210       220       230       240
pF1KE6 LPNLSLGPIDSSVLSRNKTEVDIYNSDPLICRAGLKVCFGIQLLNAVSRVERALPKLTVP
                            :::::::::::::::::::::::::::::::::::::::
CCDS58 ---------------------DIYNSDPLICRAGLKVCFGIQLLNAVSRVERALPKLTVP
                                  180       190       200       210

              250       260       270       280       290       300
pF1KE6 FLLLQGSADRLCDSKGAYLLMELAKSQDKTLKIYEGAYHVLHKELPEVTNSVFHEINMWV
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS58 FLLLQGSADRLCDSKGAYLLMELAKSQDKTLKIYEGAYHVLHKELPEVTNSVFHEINMWV
              220       230       240       250       260       270

              310   
pF1KE6 SQRTATAGTASPP
       :::::::::::::
CCDS58 SQRTATAGTASPP
              280   




313 residues in 1 query   sequences
18511270 residues in 32554 library sequences
 Tcomplib [36.3.4 Apr, 2011] (8 proc)
 start: Tue Nov  8 12:02:29 2016 done: Tue Nov  8 12:02:30 2016
 Total Scan time:  2.550 Total Display time:  0.000

Function used was FASTA [36.3.4 Apr, 2011]