FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448

Query: pF1KE6314, 349 aa
  1>>>pF1KE6314 349 - 349 aa - 349 aa
Library: human.CCDS.faa
  18511270 residues in 32554 sequences

Statistics:  Expectation_n fit: rho(ln(x))= 4.8288+/-0.000785; mu= 19.0436+/- 0.047
 mean_var=67.1282+/-13.819, 0's: 0 Z-trim(107.6): 32  B-trim: 0 in 0/47
 Lambda= 0.156539
 statistics sampled from 9640 (9663) to 9640 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
 ktup: 2, E-join: 1 (0.677), E-opt: 0.2 (0.297), width:  16
 Scan time:  2.100

The best scores are:                                      opt bits E(32554)
CCDS2711.1 ABHD5 gene_id:51099|Hs108|chr3          ( 349) 2423 556.0 1.7e-158
CCDS9572.1 ABHD4 gene_id:63874|Hs108|chr14         ( 342) 1362 316.4 2.2e-86


>>CCDS2711.1 ABHD5 gene_id:51099|Hs108|chr3               (349 aa)
 initn: 2423 init1: 2423 opt: 2423  Z-score: 2959.1  bits: 556.0 E(32554): 1.7e-158
Smith-Waterman score: 2423; 100.0% identity (100.0% similar) in 349 aa overlap (1-349:1-349)

               10        20        30        40        50        60
pF1KE6 MAAEEEEVDSADTGERSGWLTGWLPTWCPTSISHLKEAEEKMLKCVPCTYKKEPVRISNG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS27 MAAEEEEVDSADTGERSGWLTGWLPTWCPTSISHLKEAEEKMLKCVPCTYKKEPVRISNG
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KE6 NKIWTLKFSHNISNKTPLVLLHGFGGGLGLWALNFGDLCTNRPVYAFDLLGFGRSSRPRF
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS27 NKIWTLKFSHNISNKTPLVLLHGFGGGLGLWALNFGDLCTNRPVYAFDLLGFGRSSRPRF
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KE6 DSDAEEVENQFVESIEEWRCALGLDKMILLGHNLGGFLAAAYSLKYPSRVNHLILVEPWG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS27 DSDAEEVENQFVESIEEWRCALGLDKMILLGHNLGGFLAAAYSLKYPSRVNHLILVEPWG
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KE6 FPERPDLADQDRPIPVWIRALGAALTPFNPLAGLRIAGPFGLSLVQRLRPDFKRKYSSMF
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS27 FPERPDLADQDRPIPVWIRALGAALTPFNPLAGLRIAGPFGLSLVQRLRPDFKRKYSSMF
              190       200       210       220       230       240

              250       260       270       280       290       300
pF1KE6 EDDTVTEYIYHCNVQTPSGETAFKNMTIPYGWAKRPMLQRIGKMHPDIPVSVIFGARSCI
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS27 EDDTVTEYIYHCNVQTPSGETAFKNMTIPYGWAKRPMLQRIGKMHPDIPVSVIFGARSCI
              250       260       270       280       290       300

              310       320       330       340         
pF1KE6 DGNSGTSIQSLRPHSYVKTIAILGAGHYVYADQPEEFNQKVKEICDTVD
       :::::::::::::::::::::::::::::::::::::::::::::::::
CCDS27 DGNSGTSIQSLRPHSYVKTIAILGAGHYVYADQPEEFNQKVKEICDTVD
              310       320       330       340         

>>CCDS9572.1 ABHD4 gene_id:63874|Hs108|chr14              (342 aa)
 initn: 1362 init1: 1362 opt: 1362  Z-score: 1664.2  bits: 316.4 E(32554): 2.2e-86
Smith-Waterman score: 1362; 55.2% identity (81.5% similar) in 335 aa overlap (15-349:8-342)

               10        20        30        40        50        60
pF1KE6 MAAEEEEVDSADTGERSGWLTGWLPTWCPTSISHLKEAEEKMLKCVPCTYKKEPVRISNG
                     . .:::..::::: :::.:.::..: ..:.:.   .  . : . : 
CCDS95        MADDLEQQSQGWLSSWLPTWRPTSMSQLKNVEARILQCLQNKFLARYVSLPNQ
                      10        20        30        40        50   

               70        80        90       100       110       120
pF1KE6 NKIWTLKFSHNISNKTPLVLLHGFGGGLGLWALNFGDLCTNRPVYAFDLLGFGRSSRPRF
       :::::.  : . ...::::..::::::.::: ::. .: . : ...:::::::::::: :
CCDS95 NKIWTVTVSPEQNDRTPLVMVHGFGGGVGLWILNMDSLSARRTLHTFDLLGFGRSSRPAF
            60        70        80        90       100       110   

              130       140       150       160       170       180
pF1KE6 DSDAEEVENQFVESIEEWRCALGLDKMILLGHNLGGFLAAAYSLKYPSRVNHLILVEPWG
         : : .:..:: ::: :: ..:. .::::::.::::::..::.:::.::.:::::.:::
CCDS95 PRDPEGAEDEFVTSIETWRETMGIPSMILLGHSLGGFLATSYSIKYPDRVKHLILVDPWG
           120       130       140       150       160       170   

              190       200       210       220       230       240
pF1KE6 FPERPDLADQDRPIPVWIRALGAALTPFNPLAGLRIAGPFGLSLVQRLRPDFKRKYSSMF
       :: ::   .. :  :.:..:....:   :::: ::.:::.: .::::.:::::::....:
CCDS95 FPLRPTNPSEIRAPPAWVKAVASVLGRSNPLAVLRVAGPWGPGLVQRFRPDFKRKFADFF
           180       190       200       210       220       230   

              250       260       270       280       290       300
pF1KE6 EDDTVTEYIYHCNVQTPSGETAFKNMTIPYGWAKRPMLQRIGKMHPDIPVSVIFGARSCI
       ::::..:::::::.:.:::::::: :   .:::.::::.::  .. :.:...:.:. . :
CCDS95 EDDTISEYIYHCNAQNPSGETAFKAMMESFGWARRPMLERIHLIRKDVPITMIYGSDTWI
           240       250       260       270       280       290   

              310       320       330       340         
pF1KE6 DGNSGTSIQSLRPHSYVKTIAILGAGHYVYADQPEEFNQKVKEICDTVD
       : ..: ...  :: :::. . : ::.:.::::::. ::  :.::::.::
CCDS95 DTSTGKKVKMQRPDSYVRDMEIKGASHHVYADQPHIFNAVVEEICDSVD
           300       310       320       330       340  




349 residues in 1 query   sequences
18511270 residues in 32554 library sequences
 Tcomplib [36.3.4 Apr, 2011] (8 proc)
 start: Tue Nov  8 12:00:54 2016 done: Tue Nov  8 12:00:54 2016
 Total Scan time:  2.100 Total Display time: -0.030

Function used was FASTA [36.3.4 Apr, 2011]