Result of FASTA (ccds) for
pFN21AE6265
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KE6265, 264 aa
1>>>pF1KE6265 264 - 264 aa - 264 aa
Library: human.CCDS.faa
18511270 residues in 32554 sequences
Statistics: Expectation_n fit: rho(ln(x))= 5.1510+/-0.000824; mu= 16.0201+/- 0.050
mean_var=65.2038+/-12.839, 0's: 0 Z-trim(108.1): 179 B-trim: 94 in 1/48
Lambda= 0.158832
statistics sampled from 9808 (9990) to 9808 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.678), E-opt: 0.2 (0.307), width: 16
Scan time: 1.830
The best scores are: opt bits E(32554)
CCDS10852.1 CTRL gene_id:1506|Hs108|chr16 ( 264) 1795 419.7 1e-117
CCDS32489.1 CTRB2 gene_id:440387|Hs108|chr16 ( 263) 1063 252.0 3.2e-67
CCDS32490.1 CTRB1 gene_id:1504|Hs108|chr16 ( 263) 1047 248.3 4.1e-66
CCDS157.1 CELA2A gene_id:63036|Hs108|chr1 ( 269) 731 175.9 2.6e-44
CCDS219.1 CELA3B gene_id:23436|Hs108|chr1 ( 270) 710 171.1 7.4e-43
CCDS30605.1 CELA2B gene_id:51032|Hs108|chr1 ( 269) 693 167.2 1.1e-41
CCDS220.1 CELA3A gene_id:10136|Hs108|chr1 ( 270) 663 160.3 1.3e-39
CCDS156.1 CTRC gene_id:11330|Hs108|chr1 ( 268) 649 157.1 1.2e-38
CCDS13686.1 TMPRSS3 gene_id:64699|Hs108|chr21 ( 454) 651 157.7 1.3e-38
CCDS58790.1 TMPRSS3 gene_id:64699|Hs108|chr21 ( 453) 649 157.2 1.8e-38
CCDS5279.1 PLG gene_id:5340|Hs108|chr6 ( 810) 633 153.7 3.7e-37
CCDS8812.1 CELA1 gene_id:1990|Hs108|chr12 ( 258) 617 149.8 1.8e-36
CCDS13571.1 TMPRSS15 gene_id:5651|Hs108|chr21 (1019) 599 146.0 9.9e-35
CCDS32993.1 HPN gene_id:3249|Hs108|chr19 ( 417) 593 144.4 1.2e-34
CCDS34120.1 KLKB1 gene_id:3818|Hs108|chr4 ( 638) 593 144.5 1.8e-34
CCDS47958.1 PRSS3 gene_id:5646|Hs108|chr9 ( 304) 575 140.2 1.7e-33
CCDS56570.1 PRSS3 gene_id:5646|Hs108|chr9 ( 240) 573 139.6 1.9e-33
CCDS33564.1 TMPRSS2 gene_id:7113|Hs108|chr21 ( 492) 575 140.3 2.5e-33
CCDS54486.1 TMPRSS2 gene_id:7113|Hs108|chr21 ( 529) 575 140.3 2.6e-33
CCDS12088.1 TMPRSS9 gene_id:360200|Hs108|chr19 (1059) 577 141.0 3.4e-33
CCDS75122.1 CORIN gene_id:10699|Hs108|chr4 ( 938) 573 140.0 5.8e-33
CCDS5872.1 PRSS1 gene_id:5644|Hs108|chr7 ( 247) 566 138.1 5.9e-33
CCDS3477.1 CORIN gene_id:10699|Hs108|chr4 (1042) 573 140.0 6.3e-33
CCDS6545.1 PRSS3 gene_id:5646|Hs108|chr9 ( 247) 565 137.8 6.9e-33
CCDS56571.1 PRSS3 gene_id:5646|Hs108|chr9 ( 261) 565 137.8 7.2e-33
CCDS10430.1 TPSG1 gene_id:25823|Hs108|chr16 ( 321) 563 137.4 1.2e-32
CCDS3847.1 F11 gene_id:2160|Hs108|chr4 ( 625) 561 137.2 2.8e-32
CCDS83236.1 PRSS2 gene_id:5645|Hs108|chr7 ( 247) 553 135.1 4.6e-32
CCDS74856.1 TMPRSS6 gene_id:164656|Hs108|chr22 ( 802) 558 136.5 5.5e-32
CCDS13941.1 TMPRSS6 gene_id:164656|Hs108|chr22 ( 811) 558 136.5 5.5e-32
CCDS12823.2 KLK14 gene_id:43847|Hs108|chr19 ( 267) 548 133.9 1.1e-31
CCDS1563.1 PRSS38 gene_id:339501|Hs108|chr1 ( 326) 545 133.3 2.1e-31
CCDS55788.1 TMPRSS13 gene_id:84000|Hs108|chr11 ( 532) 546 133.7 2.6e-31
CCDS58185.1 TMPRSS13 gene_id:84000|Hs108|chr11 ( 563) 546 133.7 2.8e-31
CCDS41721.1 TMPRSS13 gene_id:84000|Hs108|chr11 ( 567) 546 133.7 2.8e-31
CCDS73391.1 TMPRSS5 gene_id:80975|Hs108|chr11 ( 413) 543 132.9 3.5e-31
CCDS73392.1 TMPRSS5 gene_id:80975|Hs108|chr11 ( 448) 543 132.9 3.7e-31
CCDS44735.1 TMPRSS5 gene_id:80975|Hs108|chr11 ( 457) 543 132.9 3.8e-31
CCDS3518.1 TMPRSS11D gene_id:9407|Hs108|chr4 ( 418) 541 132.5 4.8e-31
CCDS74669.1 PRSS56 gene_id:646960|Hs108|chr2 ( 603) 537 131.6 1.2e-30
CCDS12819.1 KLK11 gene_id:11012|Hs108|chr19 ( 250) 529 129.6 2.1e-30
CCDS12818.1 KLK11 gene_id:11012|Hs108|chr19 ( 282) 529 129.6 2.3e-30
CCDS43129.2 TMPRSS7 gene_id:344805|Hs108|chr3 ( 717) 531 130.3 3.6e-30
CCDS3521.1 TMPRSS11B gene_id:132724|Hs108|chr4 ( 416) 528 129.5 3.8e-30
CCDS3520.1 TMPRSS11F gene_id:389208|Hs108|chr4 ( 438) 527 129.3 4.6e-30
CCDS82261.1 CFD gene_id:1675|Hs108|chr19 ( 260) 524 128.4 4.8e-30
CCDS12821.1 KLK12 gene_id:43849|Hs108|chr19 ( 248) 523 128.2 5.5e-30
CCDS46816.1 PRSS42 gene_id:339906|Hs108|chr3 ( 293) 522 128.0 7.3e-30
CCDS5976.1 PRSS55 gene_id:203074|Hs108|chr8 ( 352) 522 128.1 8.5e-30
CCDS73251.1 OVCH2 gene_id:341277|Hs108|chr11 ( 565) 522 128.2 1.3e-29
>>CCDS10852.1 CTRL gene_id:1506|Hs108|chr16 (264 aa)
initn: 1795 init1: 1795 opt: 1795 Z-score: 2226.7 bits: 419.7 E(32554): 1e-117
Smith-Waterman score: 1795; 100.0% identity (100.0% similar) in 264 aa overlap (1-264:1-264)
10 20 30 40 50 60
pF1KE6 MLLLSLTLSLVLLGSSWGCGIPAIKPALSFSQRIVNGENAVLGSWPWQVSLQDSSGFHFC
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS10 MLLLSLTLSLVLLGSSWGCGIPAIKPALSFSQRIVNGENAVLGSWPWQVSLQDSSGFHFC
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE6 GGSLISQSWVVTAAHCNVSPGRHFVVLGEYDRSSNAEPLQVLSVSRAITHPSWNSTTMNN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS10 GGSLISQSWVVTAAHCNVSPGRHFVVLGEYDRSSNAEPLQVLSVSRAITHPSWNSTTMNN
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE6 DVTLLKLASPAQYTTRISPVCLASSNEALTEGLTCVTTGWGRLSGVGNVTPAHLQQVALP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS10 DVTLLKLASPAQYTTRISPVCLASSNEALTEGLTCVTTGWGRLSGVGNVTPAHLQQVALP
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE6 LVTVNQCRQYWGSSITDSMICAGGAGASSCQGDSGGPLVCQKGNTWVLIGIVSWGTKNCN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS10 LVTVNQCRQYWGSSITDSMICAGGAGASSCQGDSGGPLVCQKGNTWVLIGIVSWGTKNCN
190 200 210 220 230 240
250 260
pF1KE6 VRAPAVYTRVSKFSTWINQVIAYN
::::::::::::::::::::::::
CCDS10 VRAPAVYTRVSKFSTWINQVIAYN
250 260
>>CCDS32489.1 CTRB2 gene_id:440387|Hs108|chr16 (263 aa)
initn: 1080 init1: 694 opt: 1063 Z-score: 1320.3 bits: 252.0 E(32554): 3.2e-67
Smith-Waterman score: 1063; 54.5% identity (83.0% similar) in 264 aa overlap (1-264:1-263)
10 20 30 40 50 60
pF1KE6 MLLLSLTLSLVLLGSSWGCGIPAIKPALSFSQRIVNGENAVLGSWPWQVSLQDSSGFHFC
: .: : .:::...:::.:::.:.:: .::::::.:: :::::::::::..:::::
CCDS32 MAFLWLLSCWALLGTTFGCGVPAIHPVLSGLSRIVNGEDAVPGSWPWQVSLQDKTGFHFC
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE6 GGSLISQSWVVTAAHCNVSPGRHFVVLGEYDRSSNAEPLQVLSVSRAITHPSWNSTTMNN
::::::..::::::::.: . :: ::.:..:. : .:::...... .:... :.::
CCDS32 GGSLISEDWVVTAAHCGVRTS-DVVVAGEFDQGSDEENIQVLKIAKVFKNPKFSILTVNN
70 80 90 100 110
130 140 150 160 170 180
pF1KE6 DVTLLKLASPAQYTTRISPVCLASSNEALTEGLTCVTTGWGRLSGVGNVTPAHLQQVALP
:.::::::.::... .: ::: :... . : :.:::::. . .: :: .:::.:::
CCDS32 DITLLKLATPARFSQTVSAVCLPSADDDFPAGTLCATTGWGKTKYNANKTPDKLQQAALP
120 130 140 150 160 170
190 200 210 220 230 240
pF1KE6 LVTVNQCRQYWGSSITDSMICAGGAGASSCQGDSGGPLVCQKGNTWVLIGIVSWGTKNCN
:.. .:.. :: ::: :::::..:.:::.::::::::::: ..:.:.::::::...:.
CCDS32 LLSNAECKKSWGRRITDVMICAGASGVSSCMGDSGGPLVCQKDGAWTLVGIVSWGSRTCS
180 190 200 210 220 230
250 260
pF1KE6 VRAPAVYTRVSKFSTWINQVIAYN
. .::::.::.:. :.....: :
CCDS32 TTTPAVYARVAKLIPWVQKILAAN
240 250 260
>>CCDS32490.1 CTRB1 gene_id:1504|Hs108|chr16 (263 aa)
initn: 1050 init1: 687 opt: 1047 Z-score: 1300.4 bits: 248.3 E(32554): 4.1e-66
Smith-Waterman score: 1047; 53.8% identity (82.2% similar) in 264 aa overlap (1-264:1-263)
10 20 30 40 50 60
pF1KE6 MLLLSLTLSLVLLGSSWGCGIPAIKPALSFSQRIVNGENAVLGSWPWQVSLQDSSGFHFC
: : : . :.:...:::.:::.:.:: .::::::.:: :::::::::::..:::::
CCDS32 MASLWLLSCFSLVGAAFGCGVPAIHPVLSGLSRIVNGEDAVPGSWPWQVSLQDKTGFHFC
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE6 GGSLISQSWVVTAAHCNVSPGRHFVVLGEYDRSSNAEPLQVLSVSRAITHPSWNSTTMNN
::::::..::::::::.: . :: ::.:..:. : .:::...... .:... :.::
CCDS32 GGSLISEDWVVTAAHCGVRTS-DVVVAGEFDQGSDEENIQVLKIAKVFKNPKFSILTVNN
70 80 90 100 110
130 140 150 160 170 180
pF1KE6 DVTLLKLASPAQYTTRISPVCLASSNEALTEGLTCVTTGWGRLSGVGNVTPAHLQQVALP
:.::::::.::... .: ::: :... . : :.:::::. . .: :: .:::.:::
CCDS32 DITLLKLATPARFSQTVSAVCLPSADDDFPAGTLCATTGWGKTKYNANKTPDKLQQAALP
120 130 140 150 160 170
190 200 210 220 230 240
pF1KE6 LVTVNQCRQYWGSSITDSMICAGGAGASSCQGDSGGPLVCQKGNTWVLIGIVSWGTKNCN
:.. .:.. :: ::: :::::..:.:::.::::::::::: ..:.:.::::::. .:.
CCDS32 LLSNAECKKSWGRRITDVMICAGASGVSSCMGDSGGPLVCQKDGAWTLVGIVSWGSDTCS
180 190 200 210 220 230
250 260
pF1KE6 VRAPAVYTRVSKFSTWINQVIAYN
. .:.::.::.:. :.....: :
CCDS32 TSSPGVYARVTKLIPWVQKILAAN
240 250 260
>>CCDS157.1 CELA2A gene_id:63036|Hs108|chr1 (269 aa)
initn: 486 init1: 176 opt: 731 Z-score: 909.0 bits: 175.9 E(32554): 2.6e-44
Smith-Waterman score: 731; 45.5% identity (69.8% similar) in 275 aa overlap (2-264:1-269)
10 20 30 40 50
pF1KE6 MLLLSLTLSLVLLGSSWGCGIPAIKPALSFSQRIVNGENAVLGSWPWQVSLQDSSG---F
.. .: :: .. :. .:: :. : .. :.:.::.: .::::::::: ::. .
CCDS15 MIRTLLLSTLVAGA-LSCGDPTYPPYVT---RVVGGEEARPNSWPWQVSLQYSSNGKWY
10 20 30 40 50
60 70 80 90 100 110
pF1KE6 HFCGGSLISQSWVVTAAHCNVSPGRHFVV-LGEYDRSSNAEPLQVLSVSRAITHPSWNST
: ::::::..:::.::::: .: .: . : ::... ..:::. ..: .:::.
CCDS15 HTCGGSLIANSWVLTAAHC-ISSSRTYRVGLGRHNLYVAESGSLAVSVSKIVVHKDWNSN
60 70 80 90 100 110
120 130 140 150 160 170
pF1KE6 TMN--NDVTLLKLASPAQYTTRISPVCLASSNEALTEGLTCVTTGWGRLSGVGNVTPAHL
.. ::..:::::.:.. : .:. .:: .. : .. : .::::::. : : : :
CCDS15 QISKGNDIALLKLANPVSLTDKIQLACLPPAGTILPNNYPCYVTGWGRLQTNGAV-PDVL
120 130 140 150 160 170
180 190 200 210 220 230
pF1KE6 QQVALPLVTVNQCRQ--YWGSSITDSMICAGGAGA-SSCQGDSGGPLVCQKGN-TWVLIG
:: : .: : . .::::. ::::::: :. :::.::::::: :: .. : . :
CCDS15 QQGRLLVVDYATCSSSAWWGSSVKTSMICAGGDGVISSCNGDSGGPLNCQASDGRWQVHG
180 190 200 210 220 230
240 250 260
pF1KE6 IVSWGTK-NCNV-RAPAVYTRVSKFSTWINQVIAYN
:::.:.. .:: . :.:.::::.. :::.::: :
CCDS15 IVSFGSRLGCNYYHKPSVFTRVSNYIDWINSVIANN
240 250 260
>>CCDS219.1 CELA3B gene_id:23436|Hs108|chr1 (270 aa)
initn: 506 init1: 182 opt: 710 Z-score: 882.9 bits: 171.1 E(32554): 7.4e-43
Smith-Waterman score: 710; 43.4% identity (69.0% similar) in 274 aa overlap (2-262:1-268)
10 20 30 40 50
pF1KE6 MLLLSLTLSLVLLGSSWGCGIPAIKPALSFSQRIVNGENAVLGSWPWQVSLQ-DSSG--F
..: : ::.:.. . : : :. .: :.:.::::.:: ::::::::: ..:: .
CCDS21 MMLRLLSSLLLVAVASGYGPPSSRP----SSRVVNGEDAVPYSWPWQVSLQYEKSGSFY
10 20 30 40 50
60 70 80 90 100 110
pF1KE6 HFCGGSLISQSWVVTAAHCNVSPGRHF-VVLGEYDRSSNAEPLQVLSVSRA--ITHPSWN
: ::::::. .:::::.:: .: .: . ::::::::. . : ::. .. . ..:: ::
CCDS21 HTCGGSLIAPDWVVTAGHC-ISSSRTYQVVLGEYDRAVKEGPEQVIPINSGDLFVHPLWN
60 70 80 90 100 110
120 130 140 150 160 170
pF1KE6 STTM--NNDVTLLKLASPAQYTTRISPVCLASSNEALTEGLTCVTTGWGRLSGVGNVTPA
. . .::..:.::. :: .. . : ... : . : :::::: : . :
CCDS21 RSCVACGNDIALIKLSRSAQLGDAVQLASLPPAGDILPNETPCYITGWGRLYTNGPL-PD
120 130 140 150 160 170
180 190 200 210 220
pF1KE6 HLQQVALPLVTVNQCRQY--WGSSITDSMICAGGAGASSCQGDSGGPLVCQ-KGNTWVLI
.::.. ::.: ..: .. ::::. .:.:::: :.:.::::::: : . . : .
CCDS21 KLQEALLPVVDYEHCSRWNWWGSSVKKTMVCAGGDIRSGCNGDSGGPLNCPTEDGGWQVH
180 190 200 210 220 230
230 240 250 260
pF1KE6 GIVSWGTK-NCNVR-APAVYTRVSKFSTWINQVIAYN
:..:. . .::.: :.:.:::: : ::...::
CCDS21 GVTSFVSAFGCNTRRKPTVFTRVSAFIDWIEETIASH
240 250 260 270
>>CCDS30605.1 CELA2B gene_id:51032|Hs108|chr1 (269 aa)
initn: 512 init1: 189 opt: 693 Z-score: 861.9 bits: 167.2 E(32554): 1.1e-41
Smith-Waterman score: 693; 42.0% identity (67.5% similar) in 274 aa overlap (2-264:1-269)
10 20 30 40 50
pF1KE6 MLLLSLTLSLVLLGSSWGCGIPAIKPALSFSQRIVNGENAVLGSWPWQVSLQDSSG---F
.. .: :: .. :. .::. . : .: :...::.: .::::::::: ::. .
CCDS30 MIRTLLLSTLVAGA-LSCGVSTYAPDMS---RMLGGEEARPNSWPWQVSLQYSSNGQWY
10 20 30 40 50
60 70 80 90 100 110
pF1KE6 HFCGGSLISQSWVVTAAHCNVSPGRHFVVLGEYDRSSNAEPLQVLSVSRAITHPSWNSTT
: ::::::..:::.::::: : : . :.::... ..:::. ..: .:::
CCDS30 HTCGGSLIANSWVLTAAHCISSSGIYRVMLGQHNLYVAESGSLAVSVSKIVVHKDWNSDQ
60 70 80 90 100 110
120 130 140 150 160 170
pF1KE6 MN--NDVTLLKLASPAQYTTRISPVCLASSNEALTEGLTCVTTGWGRLSGVGNVTPAHLQ
.. ::..:::::.:.. : .:. .:: .. : .. : .::::::. : . : :.
CCDS30 VSKGNDIALLKLANPVSLTDKIQLACLPPAGTILPNNYPCYVTGWGRLQTNGAL-PDDLK
120 130 140 150 160 170
180 190 200 210 220 230
pF1KE6 QVALPLVTVNQCRQ--YWGSSITDSMICAGGAGA-SSCQGDSGGPLVCQKGN-TWVLIGI
: : .: : . .:::.. .:::::: :. .:.::::::: :: .. : . ::
CCDS30 QGQLLVVDYATCSSSGWWGSTVKTNMICAGGDGVICTCNGDSGGPLNCQASDGRWEVHGI
180 190 200 210 220 230
240 250 260
pF1KE6 VSWGTK-NCNVR-APAVYTRVSKFSTWINQVIAYN
: . .:: :...::::... :::.::: :
CCDS30 GSLTSVLGCNYYYKPSIFTRVSNYNDWINSVIANN
240 250 260
>>CCDS220.1 CELA3A gene_id:10136|Hs108|chr1 (270 aa)
initn: 599 init1: 151 opt: 663 Z-score: 824.7 bits: 160.3 E(32554): 1.3e-39
Smith-Waterman score: 663; 41.4% identity (66.3% similar) in 273 aa overlap (2-262:1-268)
10 20 30 40 50
pF1KE6 MLLLSLTLSLVLLGSSWGCGIPAIKPALSFSQRIVNGENAVLGSWPWQVSLQ-DSSG--F
..: : ::.:.. . : : : :. :.:.:.::.:: ::::::::: ..:: .
CCDS22 MMLRLLSSLLLVAVASGYG-P---PSSHSSSRVVHGEDAVPYSWPWQVSLQYEKSGSFY
10 20 30 40 50
60 70 80 90 100 110
pF1KE6 HFCGGSLISQSWVVTAAHCNVSPGRHFVVLGEYDRSSNAEPLQVLSVSRA--ITHPSWNS
: ::::::. .:::::.:: . ::::::. . . : ::. .. ..:: ::
CCDS22 HTCGGSLIAPDWVVTAGHCISRDLTYQVVLGEYNLAVKEGPEQVIPINSEELFVHPLWNR
60 70 80 90 100 110
120 130 140 150 160 170
pF1KE6 TTM--NNDVTLLKLASPAQYTTRISPVCLASSNEALTEGLTCVTTGWGRLSGVGNVTPAH
. . .::..:.::. :: .. . : ... : . : :::::: : . : .
CCDS22 SCVACGNDIALIKLSRSAQLGDAVQLASLPPAGDILPNKTPCYITGWGRLYTNGPL-PDK
120 130 140 150 160 170
180 190 200 210 220 230
pF1KE6 LQQVALPLVTVNQCRQY--WGSSITDSMICAGGAGASSCQGDSGGPLVCQ-KGNTWVLIG
:::. ::.: ..: .. :::.. .:.:::: :.:.::::::: : . . : . :
CCDS22 LQQARLPVVDYKHCSRWNWWGSTVKKTMVCAGGYIRSGCNGDSGGPLNCPTEDGGWQVHG
180 190 200 210 220 230
240 250 260
pF1KE6 IVSWGTK-NCN-VRAPAVYTRVSKFSTWINQVIAYN
..:. . .:: . :.:.:::: : ::...::
CCDS22 VTSFVSAFGCNFIWKPTVFTRVSAFIDWIEETIASH
240 250 260 270
>>CCDS156.1 CTRC gene_id:11330|Hs108|chr1 (268 aa)
initn: 515 init1: 150 opt: 649 Z-score: 807.4 bits: 157.1 E(32554): 1.2e-38
Smith-Waterman score: 649; 39.9% identity (67.2% similar) in 268 aa overlap (3-259:1-264)
10 20 30 40 50
pF1KE6 MLLLSLTLSLVLLGSSWGCGIPAIKPALSFSQRIVNGENAVLGSWPWQVSLQ---DSSGF
.:..:. .::. . .::.:.. : : : :.:.::.: :::::.::: ...
CCDS15 MLGITVLAALLACASSCGVPSFPPNL--SARVVGGEDARPHSWPWQISLQYLKNDTWR
10 20 30 40 50
60 70 80 90 100 110
pF1KE6 HFCGGSLISQSWVVTAAHCNVSPGRHF-VVLGEYD-RSSNAEPLQVLSVSRAITHPSWNS
: :::.::....:.::::: .: : . :..:. . . . : ..:. .: ::.
CCDS15 HTCGGTLIASNFVLTAAHC-ISNTRTYRVAVGKNNLEVEDEEGSLFVGVDTIHVHKRWNA
60 70 80 90 100 110
120 130 140 150 160 170
pF1KE6 TTMNNDVTLLKLASPAQYTTRISPVCLASSNEALTEGLTCVTTGWGRLSGVGNVTPAHLQ
. ::..:.::: .. . :. .:: .. : . : .:::::: : .. .::
CCDS15 LLLRNDIALIKLAEHVELSDTIQVACLPEKDSLLPKDYPCYVTGWGRLWTNGPIAD-KLQ
120 130 140 150 160 170
180 190 200 210 220 230
pF1KE6 QVALPLVTVNQCRQ--YWGSSITDSMICAGGAGA-SSCQGDSGGPLVCQKGN-TWVLIGI
: :.: : . .:: . .:.:::: :. :.:.::::::: :: : .: ..::
CCDS15 QGLQPVVDHATCSRIDWWGFRVKKTMVCAGGDGVISACNGDSGGPLNCQLENGSWEVFGI
180 190 200 210 220 230
240 250 260
pF1KE6 VSWGTK-NCNVRA-PAVYTRVSKFSTWINQVIAYN
::.:.. .::.: :.:::::: . :::.
CCDS15 VSFGSRRGCNTRKKPVVYTRVSAYIDWINEKMQL
240 250 260
>>CCDS13686.1 TMPRSS3 gene_id:64699|Hs108|chr21 (454 aa)
initn: 566 init1: 221 opt: 651 Z-score: 806.5 bits: 157.7 E(32554): 1.3e-38
Smith-Waterman score: 651; 40.8% identity (71.8% similar) in 238 aa overlap (30-259:213-446)
10 20 30 40 50
pF1KE6 MLLLSLTLSLVLLGSSWGCGIPAIKPALSFSQRIVNGENAVLGSWPWQVSLQDSSGFHF
.:.:::.:. ..:..::::.::: .:.:.
CCDS13 ALHHSVYVREGCASGHVVTLQCTACGHRRGYSSRIVGGNMSLLSQWPWQASLQ-FQGYHL
190 200 210 220 230 240
60 70 80 90 100 110
pF1KE6 CGGSLISQSWVVTAAHCNVS---PGRHFVVLGEYDRSSNAEPLQVLSVSRAITHPSWNST
::::.:. :..::::: . : . .: . .: : .. : . . : ...
CCDS13 CGGSVITPLWIITAAHCVYDLYLPKSWTIQVGLVSLLDNPAPSHL--VEKIVYHSKYKPK
250 260 270 280 290
120 130 140 150 160 170
pF1KE6 TMNNDVTLLKLASPAQYTTRISPVCLASSNEALTEGLTCVTTGWGRL-SGVGNVTPAHLQ
..::..:.:::.: .. :.:::: .:.: . .: .: :.::: .:.:...:. :.
CCDS13 RLGNDIALMKLAGPLTFNEMIQPVCLPNSEENFPDGKVCWTSGWGATEDGAGDASPV-LN
300 310 320 330 340 350
180 190 200 210 220 230
pF1KE6 QVALPLVTVNQC--RQYWGSSITDSMICAG--GAGASSCQGDSGGPLVCQKGNTWVLIGI
..:.::.. . : :. .:. :. ::.::: .:..:::::::::::::. : :.:
CCDS13 HAAVPLISNKICNHRDVYGGIISPSMLCAGYLTGGVDSCQGDSGGPLVCQERRLWKLVGA
360 370 380 390 400 410
240 250 260
pF1KE6 VSWGTKNCNVRAPAVYTRVSKFSTWINQVIAYN
.:.: .: :.:::::..: ::..
CCDS13 TSFGIGCAEVNKPGVYTRVTSFLDWIHEQMERDLKT
420 430 440 450
>>CCDS58790.1 TMPRSS3 gene_id:64699|Hs108|chr21 (453 aa)
initn: 453 init1: 216 opt: 649 Z-score: 804.1 bits: 157.2 E(32554): 1.8e-38
Smith-Waterman score: 649; 40.5% identity (70.9% similar) in 237 aa overlap (30-259:213-445)
10 20 30 40 50
pF1KE6 MLLLSLTLSLVLLGSSWGCGIPAIKPALSFSQRIVNGENAVLGSWPWQVSLQDSSGFHF
.:.:::.:. ..:..::::.::: .:.:.
CCDS58 ALHHSVYVREGCASGHVVTLQCTACGHRRGYSSRIVGGNMSLLSQWPWQASLQ-FQGYHL
190 200 210 220 230 240
60 70 80 90 100 110
pF1KE6 CGGSLISQSWVVTAAHCNVS---PGRHFVVLGEYDRSSNAEPLQVLSVSRAITHPSWNST
::::.:. :..::::: . : . .: . .: : .. : . . : ...
CCDS58 CGGSVITPLWIITAAHCVYDLYLPKSWTIQVGLVSLLDNPAPSHL--VEKIVYHSKYKPK
250 260 270 280 290
120 130 140 150 160 170
pF1KE6 TMNNDVTLLKLASPAQYTTRISPVCLASSNEALTEGLTCVTTGWGRLSGVGNVTPAHLQQ
..::..:.:::.: .. :.:::: .:.: . .: .: :.::: :...:. :..
CCDS58 RLGNDIALMKLAGPLTFNEMIQPVCLPNSEENFPDGKVCWTSGWGATEDGGDASPV-LNH
300 310 320 330 340 350
180 190 200 210 220 230
pF1KE6 VALPLVTVNQC--RQYWGSSITDSMICAG--GAGASSCQGDSGGPLVCQKGNTWVLIGIV
.:.::.. . : :. .:. :. ::.::: .:..:::::::::::::. : :.: .
CCDS58 AAVPLISNKICNHRDVYGGIISPSMLCAGYLTGGVDSCQGDSGGPLVCQERRLWKLVGAT
360 370 380 390 400 410
240 250 260
pF1KE6 SWGTKNCNVRAPAVYTRVSKFSTWINQVIAYN
:.: .: :.:::::..: ::..
CCDS58 SFGIGCAEVNKPGVYTRVTSFLDWIHEQMERDLKT
420 430 440 450
264 residues in 1 query sequences
18511270 residues in 32554 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Tue Nov 8 11:36:48 2016 done: Tue Nov 8 11:36:48 2016
Total Scan time: 1.830 Total Display time: 0.010
Function used was FASTA [36.3.4 Apr, 2011]