Result of FASTA (ccds) for
pFN21AE6264
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KE6264, 307 aa
1>>>pF1KE6264 307 - 307 aa - 307 aa
Library: human.CCDS.faa
18511270 residues in 32554 sequences
Statistics: Expectation_n fit: rho(ln(x))= 4.9769+/-0.000939; mu= 16.7848+/- 0.056
mean_var=57.1429+/-11.813, 0's: 0 Z-trim(102.8): 29 B-trim: 0 in 0/52
Lambda= 0.169665
statistics sampled from 7084 (7105) to 7084 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.581), E-opt: 0.2 (0.218), width: 16
Scan time: 1.650
The best scores are: opt bits E(32554)
CCDS9795.1 SLC39A9 gene_id:55334|Hs108|chr14 ( 307) 1925 479.7 1.2e-135
CCDS58327.1 SLC39A9 gene_id:55334|Hs108|chr14 ( 232) 1450 363.3 9.8e-101
CCDS81816.1 SLC39A9 gene_id:55334|Hs108|chr14 ( 241) 1083 273.5 1.1e-73
CCDS58328.1 SLC39A9 gene_id:55334|Hs108|chr14 ( 284) 931 236.3 2e-62
>>CCDS9795.1 SLC39A9 gene_id:55334|Hs108|chr14 (307 aa)
initn: 1925 init1: 1925 opt: 1925 Z-score: 2548.5 bits: 479.7 E(32554): 1.2e-135
Smith-Waterman score: 1925; 99.7% identity (99.7% similar) in 307 aa overlap (1-307:1-307)
10 20 30 40 50 60
pF1KE6 MDDFISISLLSLAMLVGCYVAGIIPLAVNFSEERLKLVTVLGAGLLCGTALAVIVPEGVH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS97 MDDFISISLLSLAMLVGCYVAGIIPLAVNFSEERLKLVTVLGAGLLCGTALAVIVPEGVH
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE6 ALYEDILEGKHHQASETHNVIASDKAAEKSVVHEHEHSHDHTQLHAYIGVSLVLGFVFML
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS97 ALYEDILEGKHHQASETHNVIASDKAAEKSVVHEHEHSHDHTQLHAYIGVSLVLGFVFML
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE6 LVDQIGNSHVHSTDDPEAARSSNSKITTTLGLVVHAAADGVALGAAASTSQTSVQLIVFV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS97 LVDQIGNSHVHSTDDPEAARSSNSKITTTLGLVVHAAADGVALGAAASTSQTSVQLIVFV
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE6 AIMLHKAPAAFGLVSFLMHAGLERNRIRKHLLVFALAAPVMSMVTYLGLSKSSKEALSEV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS97 AIMLHKAPAAFGLVSFLMHAGLERNRIRKHLLVFALAAPVMSMVTYLGLSKSSKEALSEV
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE6 NATGVAMLFSAGTFLYVATVHVLPEVGGIGHSHKPDATGGRGLSCLEVAALVLGCLIPLI
:::::::::::::::::::::::::::::::::::::::::::: :::::::::::::::
CCDS97 NATGVAMLFSAGTFLYVATVHVLPEVGGIGHSHKPDATGGRGLSRLEVAALVLGCLIPLI
250 260 270 280 290 300
pF1KE6 LSVGHQH
:::::::
CCDS97 LSVGHQH
>>CCDS58327.1 SLC39A9 gene_id:55334|Hs108|chr14 (232 aa)
initn: 1450 init1: 1450 opt: 1450 Z-score: 1922.0 bits: 363.3 E(32554): 9.8e-101
Smith-Waterman score: 1450; 100.0% identity (100.0% similar) in 231 aa overlap (1-231:1-231)
10 20 30 40 50 60
pF1KE6 MDDFISISLLSLAMLVGCYVAGIIPLAVNFSEERLKLVTVLGAGLLCGTALAVIVPEGVH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS58 MDDFISISLLSLAMLVGCYVAGIIPLAVNFSEERLKLVTVLGAGLLCGTALAVIVPEGVH
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE6 ALYEDILEGKHHQASETHNVIASDKAAEKSVVHEHEHSHDHTQLHAYIGVSLVLGFVFML
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS58 ALYEDILEGKHHQASETHNVIASDKAAEKSVVHEHEHSHDHTQLHAYIGVSLVLGFVFML
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE6 LVDQIGNSHVHSTDDPEAARSSNSKITTTLGLVVHAAADGVALGAAASTSQTSVQLIVFV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS58 LVDQIGNSHVHSTDDPEAARSSNSKITTTLGLVVHAAADGVALGAAASTSQTSVQLIVFV
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE6 AIMLHKAPAAFGLVSFLMHAGLERNRIRKHLLVFALAAPVMSMVTYLGLSKSSKEALSEV
:::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS58 AIMLHKAPAAFGLVSFLMHAGLERNRIRKHLLVFALAAPVMSMVTYLGLSKD
190 200 210 220 230
250 260 270 280 290 300
pF1KE6 NATGVAMLFSAGTFLYVATVHVLPEVGGIGHSHKPDATGGRGLSCLEVAALVLGCLIPLI
>>CCDS81816.1 SLC39A9 gene_id:55334|Hs108|chr14 (241 aa)
initn: 1066 init1: 1066 opt: 1083 Z-score: 1436.2 bits: 273.5 E(32554): 1.1e-73
Smith-Waterman score: 1346; 78.2% identity (78.2% similar) in 307 aa overlap (1-307:1-241)
10 20 30 40 50 60
pF1KE6 MDDFISISLLSLAMLVGCYVAGIIPLAVNFSEERLKLVTVLGAGLLCGTALAVIVPEGVH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS81 MDDFISISLLSLAMLVGCYVAGIIPLAVNFSEERLKLVTVLGAGLLCGTALAVIVPEGVH
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE6 ALYEDILEGKHHQASETHNVIASDKAAEKSVVHEHEHSHDHTQLHAYIGVSLVLGFVFML
::::::::
CCDS81 ALYEDILE----------------------------------------------------
130 140 150 160 170 180
pF1KE6 LVDQIGNSHVHSTDDPEAARSSNSKITTTLGLVVHAAADGVALGAAASTSQTSVQLIVFV
::::::::::::::::::::::::::::::::::::::::::::::
CCDS81 --------------DPEAARSSNSKITTTLGLVVHAAADGVALGAAASTSQTSVQLIVFV
70 80 90 100 110
190 200 210 220 230 240
pF1KE6 AIMLHKAPAAFGLVSFLMHAGLERNRIRKHLLVFALAAPVMSMVTYLGLSKSSKEALSEV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS81 AIMLHKAPAAFGLVSFLMHAGLERNRIRKHLLVFALAAPVMSMVTYLGLSKSSKEALSEV
120 130 140 150 160 170
250 260 270 280 290 300
pF1KE6 NATGVAMLFSAGTFLYVATVHVLPEVGGIGHSHKPDATGGRGLSCLEVAALVLGCLIPLI
:::::::::::::::::::::::::::::::::::::::::::: :::::::::::::::
CCDS81 NATGVAMLFSAGTFLYVATVHVLPEVGGIGHSHKPDATGGRGLSRLEVAALVLGCLIPLI
180 190 200 210 220 230
pF1KE6 LSVGHQH
:::::::
CCDS81 LSVGHQH
240
>>CCDS58328.1 SLC39A9 gene_id:55334|Hs108|chr14 (284 aa)
initn: 927 init1: 927 opt: 931 Z-score: 1234.1 bits: 236.3 E(32554): 2e-62
Smith-Waterman score: 1732; 92.2% identity (92.2% similar) in 307 aa overlap (1-307:1-284)
10 20 30 40 50 60
pF1KE6 MDDFISISLLSLAMLVGCYVAGIIPLAVNFSEERLKLVTVLGAGLLCGTALAVIVPEGVH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS58 MDDFISISLLSLAMLVGCYVAGIIPLAVNFSEERLKLVTVLGAGLLCGTALAVIVPEGVH
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE6 ALYEDILEGKHHQASETHNVIASDKAAEKSVVHEHEHSHDHTQLHAYIGVSLVLGFVFML
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS58 ALYEDILEGKHHQASETHNVIASDKAAEKSVVHEHEHSHDHTQLHAYIGVSLVLGFVFML
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE6 LVDQIGNSHVHSTDDPEAARSSNSKITTTLGLVVHAAADGVALGAAASTSQTSVQLIVFV
:::::::::::::: :::::::::::::::::::::::
CCDS58 LVDQIGNSHVHSTD-----------------------ADGVALGAAASTSQTSVQLIVFV
130 140 150
190 200 210 220 230 240
pF1KE6 AIMLHKAPAAFGLVSFLMHAGLERNRIRKHLLVFALAAPVMSMVTYLGLSKSSKEALSEV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS58 AIMLHKAPAAFGLVSFLMHAGLERNRIRKHLLVFALAAPVMSMVTYLGLSKSSKEALSEV
160 170 180 190 200 210
250 260 270 280 290 300
pF1KE6 NATGVAMLFSAGTFLYVATVHVLPEVGGIGHSHKPDATGGRGLSCLEVAALVLGCLIPLI
:::::::::::::::::::::::::::::::::::::::::::: :::::::::::::::
CCDS58 NATGVAMLFSAGTFLYVATVHVLPEVGGIGHSHKPDATGGRGLSRLEVAALVLGCLIPLI
220 230 240 250 260 270
pF1KE6 LSVGHQH
:::::::
CCDS58 LSVGHQH
280
307 residues in 1 query sequences
18511270 residues in 32554 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Tue Nov 8 11:36:18 2016 done: Tue Nov 8 11:36:18 2016
Total Scan time: 1.650 Total Display time: -0.030
Function used was FASTA [36.3.4 Apr, 2011]