Result of FASTA (omim) for
pFN21AE6238
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KE6238, 303 aa
1>>>pF1KE6238 303 - 303 aa - 303 aa
Library: /omim/omim.rfq.tfa
60827320 residues in 85289 sequences
Statistics: Expectation_n fit: rho(ln(x))= 4.5926+/-0.000352; mu= 19.5931+/- 0.022
mean_var=68.4362+/-14.157, 0's: 0 Z-trim(114.1): 126 B-trim: 0 in 0/51
Lambda= 0.155036
statistics sampled from 23615 (23760) to 23615 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.661), E-opt: 0.2 (0.279), width: 16
Scan time: 6.760
The best scores are: opt bits E(85289)
NP_055157 (OMIM: 613221) mitochondrial carrier hom ( 303) 2043 465.9 4.5e-131
NP_001304160 (OMIM: 613221) mitochondrial carrier ( 314) 2043 465.9 4.6e-131
XP_011518261 (OMIM: 613221) PREDICTED: mitochondri ( 307) 1843 421.1 1.3e-117
XP_011518263 (OMIM: 613221) PREDICTED: mitochondri ( 270) 1491 342.4 6.1e-94
XP_006718235 (OMIM: 613221) PREDICTED: mitochondri ( 259) 1490 342.1 6.9e-94
NP_001304161 (OMIM: 613221) mitochondrial carrier ( 294) 1367 314.7 1.4e-85
XP_016872952 (OMIM: 613221) PREDICTED: mitochondri ( 176) 1206 278.4 6.9e-75
XP_011518262 (OMIM: 613221) PREDICTED: mitochondri ( 298) 1167 269.9 4.3e-72
NP_001304162 (OMIM: 613221) mitochondrial carrier ( 155) 1077 249.5 3.1e-66
NP_055156 (OMIM: 610449) mitochondrial carrier hom ( 372) 1025 238.3 1.8e-62
XP_005249036 (OMIM: 610449) PREDICTED: mitochondri ( 410) 961 224.0 4e-58
XP_016872951 (OMIM: 613221) PREDICTED: mitochondri ( 250) 814 190.9 2.2e-48
NP_001258570 (OMIM: 610449) mitochondrial carrier ( 389) 714 168.7 1.6e-41
XP_005249035 (OMIM: 610449) PREDICTED: mitochondri ( 427) 714 168.8 1.7e-41
XP_011512752 (OMIM: 610449) PREDICTED: mitochondri ( 254) 644 152.9 6.2e-37
XP_016866132 (OMIM: 610449) PREDICTED: mitochondri ( 233) 397 97.6 2.5e-20
XP_016866131 (OMIM: 610449) PREDICTED: mitochondri ( 271) 397 97.7 2.8e-20
XP_011543249 (OMIM: 610825) PREDICTED: solute carr ( 246) 152 42.8 0.00082
XP_016873051 (OMIM: 610825) PREDICTED: solute carr ( 260) 152 42.8 0.00085
NP_872362 (OMIM: 610825) solute carrier family 25 ( 288) 152 42.9 0.00091
XP_011523400 (OMIM: 606521,607196,613710) PREDICTE ( 215) 144 41.0 0.0026
XP_016880417 (OMIM: 606521,607196,613710) PREDICTE ( 215) 144 41.0 0.0026
XP_005263560 (OMIM: 610816) PREDICTED: solute carr ( 254) 138 39.7 0.0073
XP_011540598 (OMIM: 610816) PREDICTED: solute carr ( 258) 138 39.7 0.0074
NP_115691 (OMIM: 610816) solute carrier family 25 ( 321) 138 39.8 0.0087
>>NP_055157 (OMIM: 613221) mitochondrial carrier homolog (303 aa)
initn: 2043 init1: 2043 opt: 2043 Z-score: 2474.2 bits: 465.9 E(85289): 4.5e-131
Smith-Waterman score: 2043; 100.0% identity (100.0% similar) in 303 aa overlap (1-303:1-303)
10 20 30 40 50 60
pF1KE6 MADAASQVLLGSGLTILSQPLMYVKVLIQVGYEPLPPTIGRNIFGRQVCQLPGLFSYAQH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_055 MADAASQVLLGSGLTILSQPLMYVKVLIQVGYEPLPPTIGRNIFGRQVCQLPGLFSYAQH
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE6 IASIDGRRGLFTGLTPRLCSGVLGTVVHGKVLQHYQESDKGEELGPGNVQKEVSSSFDHV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_055 IASIDGRRGLFTGLTPRLCSGVLGTVVHGKVLQHYQESDKGEELGPGNVQKEVSSSFDHV
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE6 IKETTREMIARSAATLITHPFHVITLRSMVQFIGRESKYCGLCDSIITIYREEGILGFFA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_055 IKETTREMIARSAATLITHPFHVITLRSMVQFIGRESKYCGLCDSIITIYREEGILGFFA
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE6 GLVPRLLGDILSLWLCNSLAYLVNTYALDSGVSTMNEMKSYSQAVTGFFASMLTYPFVLV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_055 GLVPRLLGDILSLWLCNSLAYLVNTYALDSGVSTMNEMKSYSQAVTGFFASMLTYPFVLV
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE6 SNLMAVNNCGLAGGCPPYSPIYTSWIDCWCMLQKEGNMSRGNSLFFRKVPFGKTYCCDLK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_055 SNLMAVNNCGLAGGCPPYSPIYTSWIDCWCMLQKEGNMSRGNSLFFRKVPFGKTYCCDLK
250 260 270 280 290 300
pF1KE6 MLI
:::
NP_055 MLI
>>NP_001304160 (OMIM: 613221) mitochondrial carrier homo (314 aa)
initn: 2043 init1: 2043 opt: 2043 Z-score: 2474.0 bits: 465.9 E(85289): 4.6e-131
Smith-Waterman score: 2043; 100.0% identity (100.0% similar) in 303 aa overlap (1-303:1-303)
10 20 30 40 50 60
pF1KE6 MADAASQVLLGSGLTILSQPLMYVKVLIQVGYEPLPPTIGRNIFGRQVCQLPGLFSYAQH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MADAASQVLLGSGLTILSQPLMYVKVLIQVGYEPLPPTIGRNIFGRQVCQLPGLFSYAQH
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE6 IASIDGRRGLFTGLTPRLCSGVLGTVVHGKVLQHYQESDKGEELGPGNVQKEVSSSFDHV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 IASIDGRRGLFTGLTPRLCSGVLGTVVHGKVLQHYQESDKGEELGPGNVQKEVSSSFDHV
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE6 IKETTREMIARSAATLITHPFHVITLRSMVQFIGRESKYCGLCDSIITIYREEGILGFFA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 IKETTREMIARSAATLITHPFHVITLRSMVQFIGRESKYCGLCDSIITIYREEGILGFFA
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE6 GLVPRLLGDILSLWLCNSLAYLVNTYALDSGVSTMNEMKSYSQAVTGFFASMLTYPFVLV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 GLVPRLLGDILSLWLCNSLAYLVNTYALDSGVSTMNEMKSYSQAVTGFFASMLTYPFVLV
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE6 SNLMAVNNCGLAGGCPPYSPIYTSWIDCWCMLQKEGNMSRGNSLFFRKVPFGKTYCCDLK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 SNLMAVNNCGLAGGCPPYSPIYTSWIDCWCMLQKEGNMSRGNSLFFRKVPFGKTYCCDLK
250 260 270 280 290 300
pF1KE6 MLI
:::
NP_001 MLIXRCGAGTVTFL
310
>>XP_011518261 (OMIM: 613221) PREDICTED: mitochondrial c (307 aa)
initn: 1843 init1: 1843 opt: 1843 Z-score: 2232.3 bits: 421.1 E(85289): 1.3e-117
Smith-Waterman score: 1843; 100.0% identity (100.0% similar) in 275 aa overlap (1-275:1-275)
10 20 30 40 50 60
pF1KE6 MADAASQVLLGSGLTILSQPLMYVKVLIQVGYEPLPPTIGRNIFGRQVCQLPGLFSYAQH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 MADAASQVLLGSGLTILSQPLMYVKVLIQVGYEPLPPTIGRNIFGRQVCQLPGLFSYAQH
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE6 IASIDGRRGLFTGLTPRLCSGVLGTVVHGKVLQHYQESDKGEELGPGNVQKEVSSSFDHV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 IASIDGRRGLFTGLTPRLCSGVLGTVVHGKVLQHYQESDKGEELGPGNVQKEVSSSFDHV
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE6 IKETTREMIARSAATLITHPFHVITLRSMVQFIGRESKYCGLCDSIITIYREEGILGFFA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 IKETTREMIARSAATLITHPFHVITLRSMVQFIGRESKYCGLCDSIITIYREEGILGFFA
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE6 GLVPRLLGDILSLWLCNSLAYLVNTYALDSGVSTMNEMKSYSQAVTGFFASMLTYPFVLV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 GLVPRLLGDILSLWLCNSLAYLVNTYALDSGVSTMNEMKSYSQAVTGFFASMLTYPFVLV
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE6 SNLMAVNNCGLAGGCPPYSPIYTSWIDCWCMLQKEGNMSRGNSLFFRKVPFGKTYCCDLK
:::::::::::::::::::::::::::::::::::
XP_011 SNLMAVNNCGLAGGCPPYSPIYTSWIDCWCMLQKEEKHFQTGKSSAKQGLEDIKPQIEEK
250 260 270 280 290 300
pF1KE6 MLI
XP_011 IRENLTT
>>XP_011518263 (OMIM: 613221) PREDICTED: mitochondrial c (270 aa)
initn: 1504 init1: 1485 opt: 1491 Z-score: 1807.5 bits: 342.4 E(85289): 6.1e-94
Smith-Waterman score: 1491; 91.8% identity (94.9% similar) in 255 aa overlap (1-252:1-255)
10 20 30 40 50 60
pF1KE6 MADAASQVLLGSGLTILSQPLMYVKVLIQVGYEPLPPTIGRNIFGRQVCQLPGLFSYAQH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 MADAASQVLLGSGLTILSQPLMYVKVLIQVGYEPLPPTIGRNIFGRQVCQLPGLFSYAQH
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE6 IASIDGRRGLFTGLTPRLCSGVLGTVVHGKVLQHYQESDKGEELGPGNVQKEVSSSFDHV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 IASIDGRRGLFTGLTPRLCSGVLGTVVHGKVLQHYQESDKGEELGPGNVQKEVSSSFDHV
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE6 IKETTREMIARSAATLITHPFHVITLRSMVQFIGRESKYCGLCDSIITIYREEGILGFFA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 IKETTREMIARSAATLITHPFHVITLRSMVQFIGRESKYCGLCDSIITIYREEGILGFFA
130 140 150 160 170 180
190 200 210 220 230
pF1KE6 GLVPRLLGDILSLWLCNSLAYLVNTYALDSGVSTMNEMKSYSQAVTG---FFASMLTYPF
::::::::::::::::::::::::::::::::::::::::::::::: .. :.: .
XP_011 GLVPRLLGDILSLWLCNSLAYLVNTYALDSGVSTMNEMKSYSQAVTGSCWWMPSLLPNIY
190 200 210 220 230 240
240 250 260 270 280 290
pF1KE6 VLVSNLMAVNNCGLAGGCPPYSPIYTSWIDCWCMLQKEGNMSRGNSLFFRKVPFGKTYCC
:: :. ... : :
XP_011 VLDRLLVHATKRGKALPDWEEFSKTGVRGH
250 260 270
>>XP_006718235 (OMIM: 613221) PREDICTED: mitochondrial c (259 aa)
initn: 1485 init1: 1485 opt: 1490 Z-score: 1806.6 bits: 342.1 E(85289): 6.9e-94
Smith-Waterman score: 1490; 95.5% identity (97.1% similar) in 242 aa overlap (1-239:1-242)
10 20 30 40 50 60
pF1KE6 MADAASQVLLGSGLTILSQPLMYVKVLIQVGYEPLPPTIGRNIFGRQVCQLPGLFSYAQH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 MADAASQVLLGSGLTILSQPLMYVKVLIQVGYEPLPPTIGRNIFGRQVCQLPGLFSYAQH
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE6 IASIDGRRGLFTGLTPRLCSGVLGTVVHGKVLQHYQESDKGEELGPGNVQKEVSSSFDHV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 IASIDGRRGLFTGLTPRLCSGVLGTVVHGKVLQHYQESDKGEELGPGNVQKEVSSSFDHV
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE6 IKETTREMIARSAATLITHPFHVITLRSMVQFIGRESKYCGLCDSIITIYREEGILGFFA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 IKETTREMIARSAATLITHPFHVITLRSMVQFIGRESKYCGLCDSIITIYREEGILGFFA
130 140 150 160 170 180
190 200 210 220 230
pF1KE6 GLVPRLLGDILSLWLCNSLAYLVNTYALDSGVSTMNEMKSYSQAVTG---FFASMLTYPF
::::::::::::::::::::::::::::::::::::::::::::::: .. :.: .
XP_006 GLVPRLLGDILSLWLCNSLAYLVNTYALDSGVSTMNEMKSYSQAVTGSCWWMPSLLPNIY
190 200 210 220 230 240
240 250 260 270 280 290
pF1KE6 VLVSNLMAVNNCGLAGGCPPYSPIYTSWIDCWCMLQKEGNMSRGNSLFFRKVPFGKTYCC
::
XP_006 VLDRLLVHATKRGEYEPRK
250
>>NP_001304161 (OMIM: 613221) mitochondrial carrier homo (294 aa)
initn: 1367 init1: 1367 opt: 1367 Z-score: 1657.2 bits: 314.7 E(85289): 1.4e-85
Smith-Waterman score: 1951; 97.0% identity (97.0% similar) in 303 aa overlap (1-303:1-294)
10 20 30 40 50 60
pF1KE6 MADAASQVLLGSGLTILSQPLMYVKVLIQVGYEPLPPTIGRNIFGRQVCQLPGLFSYAQH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MADAASQVLLGSGLTILSQPLMYVKVLIQVGYEPLPPTIGRNIFGRQVCQLPGLFSYAQH
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE6 IASIDGRRGLFTGLTPRLCSGVLGTVVHGKVLQHYQESDKGEELGPGNVQKEVSSSFDHV
::::::::::::::::::::::::::::::::: ::::::::::::::::::
NP_001 IASIDGRRGLFTGLTPRLCSGVLGTVVHGKVLQ---------ELGPGNVQKEVSSSFDHV
70 80 90 100 110
130 140 150 160 170 180
pF1KE6 IKETTREMIARSAATLITHPFHVITLRSMVQFIGRESKYCGLCDSIITIYREEGILGFFA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 IKETTREMIARSAATLITHPFHVITLRSMVQFIGRESKYCGLCDSIITIYREEGILGFFA
120 130 140 150 160 170
190 200 210 220 230 240
pF1KE6 GLVPRLLGDILSLWLCNSLAYLVNTYALDSGVSTMNEMKSYSQAVTGFFASMLTYPFVLV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 GLVPRLLGDILSLWLCNSLAYLVNTYALDSGVSTMNEMKSYSQAVTGFFASMLTYPFVLV
180 190 200 210 220 230
250 260 270 280 290 300
pF1KE6 SNLMAVNNCGLAGGCPPYSPIYTSWIDCWCMLQKEGNMSRGNSLFFRKVPFGKTYCCDLK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 SNLMAVNNCGLAGGCPPYSPIYTSWIDCWCMLQKEGNMSRGNSLFFRKVPFGKTYCCDLK
240 250 260 270 280 290
pF1KE6 MLI
:::
NP_001 MLI
>>XP_016872952 (OMIM: 613221) PREDICTED: mitochondrial c (176 aa)
initn: 1206 init1: 1206 opt: 1206 Z-score: 1465.4 bits: 278.4 E(85289): 6.9e-75
Smith-Waterman score: 1206; 100.0% identity (100.0% similar) in 176 aa overlap (128-303:1-176)
100 110 120 130 140 150
pF1KE6 SDKGEELGPGNVQKEVSSSFDHVIKETTREMIARSAATLITHPFHVITLRSMVQFIGRES
::::::::::::::::::::::::::::::
XP_016 MIARSAATLITHPFHVITLRSMVQFIGRES
10 20 30
160 170 180 190 200 210
pF1KE6 KYCGLCDSIITIYREEGILGFFAGLVPRLLGDILSLWLCNSLAYLVNTYALDSGVSTMNE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 KYCGLCDSIITIYREEGILGFFAGLVPRLLGDILSLWLCNSLAYLVNTYALDSGVSTMNE
40 50 60 70 80 90
220 230 240 250 260 270
pF1KE6 MKSYSQAVTGFFASMLTYPFVLVSNLMAVNNCGLAGGCPPYSPIYTSWIDCWCMLQKEGN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 MKSYSQAVTGFFASMLTYPFVLVSNLMAVNNCGLAGGCPPYSPIYTSWIDCWCMLQKEGN
100 110 120 130 140 150
280 290 300
pF1KE6 MSRGNSLFFRKVPFGKTYCCDLKMLI
::::::::::::::::::::::::::
XP_016 MSRGNSLFFRKVPFGKTYCCDLKMLI
160 170
>>XP_011518262 (OMIM: 613221) PREDICTED: mitochondrial c (298 aa)
initn: 1167 init1: 1167 opt: 1167 Z-score: 1415.3 bits: 269.9 E(85289): 4.3e-72
Smith-Waterman score: 1751; 96.7% identity (96.7% similar) in 275 aa overlap (1-275:1-266)
10 20 30 40 50 60
pF1KE6 MADAASQVLLGSGLTILSQPLMYVKVLIQVGYEPLPPTIGRNIFGRQVCQLPGLFSYAQH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 MADAASQVLLGSGLTILSQPLMYVKVLIQVGYEPLPPTIGRNIFGRQVCQLPGLFSYAQH
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE6 IASIDGRRGLFTGLTPRLCSGVLGTVVHGKVLQHYQESDKGEELGPGNVQKEVSSSFDHV
::::::::::::::::::::::::::::::::: ::::::::::::::::::
XP_011 IASIDGRRGLFTGLTPRLCSGVLGTVVHGKVLQ---------ELGPGNVQKEVSSSFDHV
70 80 90 100 110
130 140 150 160 170 180
pF1KE6 IKETTREMIARSAATLITHPFHVITLRSMVQFIGRESKYCGLCDSIITIYREEGILGFFA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 IKETTREMIARSAATLITHPFHVITLRSMVQFIGRESKYCGLCDSIITIYREEGILGFFA
120 130 140 150 160 170
190 200 210 220 230 240
pF1KE6 GLVPRLLGDILSLWLCNSLAYLVNTYALDSGVSTMNEMKSYSQAVTGFFASMLTYPFVLV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 GLVPRLLGDILSLWLCNSLAYLVNTYALDSGVSTMNEMKSYSQAVTGFFASMLTYPFVLV
180 190 200 210 220 230
250 260 270 280 290 300
pF1KE6 SNLMAVNNCGLAGGCPPYSPIYTSWIDCWCMLQKEGNMSRGNSLFFRKVPFGKTYCCDLK
:::::::::::::::::::::::::::::::::::
XP_011 SNLMAVNNCGLAGGCPPYSPIYTSWIDCWCMLQKEEKHFQTGKSSAKQGLEDIKPQIEEK
240 250 260 270 280 290
pF1KE6 MLI
XP_011 IRENLTT
>>NP_001304162 (OMIM: 613221) mitochondrial carrier homo (155 aa)
initn: 1077 init1: 1077 opt: 1077 Z-score: 1310.2 bits: 249.5 E(85289): 3.1e-66
Smith-Waterman score: 1077; 100.0% identity (100.0% similar) in 155 aa overlap (149-303:1-155)
120 130 140 150 160 170
pF1KE6 HVIKETTREMIARSAATLITHPFHVITLRSMVQFIGRESKYCGLCDSIITIYREEGILGF
::::::::::::::::::::::::::::::
NP_001 MVQFIGRESKYCGLCDSIITIYREEGILGF
10 20 30
180 190 200 210 220 230
pF1KE6 FAGLVPRLLGDILSLWLCNSLAYLVNTYALDSGVSTMNEMKSYSQAVTGFFASMLTYPFV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 FAGLVPRLLGDILSLWLCNSLAYLVNTYALDSGVSTMNEMKSYSQAVTGFFASMLTYPFV
40 50 60 70 80 90
240 250 260 270 280 290
pF1KE6 LVSNLMAVNNCGLAGGCPPYSPIYTSWIDCWCMLQKEGNMSRGNSLFFRKVPFGKTYCCD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 LVSNLMAVNNCGLAGGCPPYSPIYTSWIDCWCMLQKEGNMSRGNSLFFRKVPFGKTYCCD
100 110 120 130 140 150
300
pF1KE6 LKMLI
:::::
NP_001 LKMLI
>>NP_055156 (OMIM: 610449) mitochondrial carrier homolog (372 aa)
initn: 1010 init1: 678 opt: 1025 Z-score: 1242.4 bits: 238.3 E(85289): 1.8e-62
Smith-Waterman score: 1025; 49.7% identity (82.3% similar) in 288 aa overlap (8-295:86-369)
10 20 30
pF1KE6 MADAASQVLLGSGLTILSQPLMYVKVLIQVGYEPLPP
: ::.:.: ::.::.:::.:::::.::.::
NP_055 PAAQPSARRMDGGSGGLGSGDNAPTTEALFVALGAGVTALSHPLLYVKLLIQVGHEPMPP
60 70 80 90 100 110
40 50 60 70 80 90
pF1KE6 TIGRNIFGRQVCQLPGLFSYAQHIASIDGRRGLFTGLTPRLCSGVLGTVVHGKVLQHYQE
:.: :..::.: ::..:.::..:...::. ::: ::.::: :..:.::..:.. . .
NP_055 TLGTNVLGRKVLYLPSFFTYAKYIVQVDGKIGLFRGLSPRLMSNALSTVTRGSMKKVFPP
120 130 140 150 160 170
100 110 120 130 140 150
pF1KE6 SDKGEELGPGNVQKEVSSSFDHVIKETTREMIARSAATLITHPFHVITLRSMVQFIGRES
:. :... . ....:. .:.:::. ::. . .. ...::.:::..: ::::.:::.
NP_055 -DEIEQVSN---KDDMKTSLKKVVKETSYEMMMQCVSRMLAHPLHVISMRCMVQFVGREA
180 190 200 210 220 230
160 170 180 190 200 210
pF1KE6 KYCGLCDSIITIYREEGILGFFAGLVPRLLGDILSLWLCNSLAYLVNTYALDSGVSTMNE
:: :. .:: :..:::.::::.::.:.::::.. :: :: ::...:.: .:.. :
NP_055 KYSGVLSSIGKIFKEEGLLGFFVGLIPHLLGDVVFLWGCNLLAHFINAYLVDDSFSQALA
240 250 260 270 280 290
220 230 240 250 260 270
pF1KE6 MKSYSQAVTGFFASMLTYPFVLVSNLMAVNNCGLAGGCPPYSPIYTSWIDCWCMLQKEGN
..::.. : :. .:::::::.::..::::::::: .: :::::.. ::: :: .:. .:.
NP_055 IRSYTKFVMGIAVSMLTYPFLLVGDLMAVNNCGLQAGLPPYSPVFKSWIHCWKYLSVQGQ
300 310 320 330 340 350
280 290 300
pF1KE6 MSRGNSLFFRKVPFGKTYCCDLKMLI
. ::.::.::.: :. .
NP_055 LFRGSSLLFRRVSSGSCFALE
360 370
303 residues in 1 query sequences
60827320 residues in 85289 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Tue Nov 8 11:21:23 2016 done: Tue Nov 8 11:21:24 2016
Total Scan time: 6.760 Total Display time: 0.000
Function used was FASTA [36.3.4 Apr, 2011]