Result of FASTA (omim) for
pFN21AE6235
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KE6235, 249 aa
1>>>pF1KE6235 249 - 249 aa - 249 aa
Library: /omim/omim.rfq.tfa
60827320 residues in 85289 sequences
Statistics: Expectation_n fit: rho(ln(x))= 4.3213+/-0.000428; mu= 20.0850+/- 0.026
mean_var=62.4802+/-12.554, 0's: 0 Z-trim(110.7): 95 B-trim: 0 in 0/51
Lambda= 0.162257
statistics sampled from 19031 (19128) to 19031 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.572), E-opt: 0.2 (0.224), width: 16
Scan time: 4.980
The best scores are: opt bits E(85289)
NP_004606 (OMIM: 300096,300210) tetraspanin-7 [Hom ( 249) 1663 397.9 8.7e-111
NP_003261 (OMIM: 300191) tetraspanin-6 isoform a [ ( 245) 1011 245.3 7.6e-65
NP_001265669 (OMIM: 300191) tetraspanin-6 isoform ( 157) 593 147.2 1.6e-35
XP_011529320 (OMIM: 300191) PREDICTED: tetraspanin ( 157) 593 147.2 1.6e-35
NP_001265670 (OMIM: 300191) tetraspanin-6 isoform ( 157) 593 147.2 1.6e-35
NP_001265671 (OMIM: 300191) tetraspanin-6 isoform ( 137) 495 124.2 1.2e-28
NP_001771 (OMIM: 155740) CD63 antigen isoform A [H ( 238) 490 123.3 3.8e-28
NP_001244318 (OMIM: 155740) CD63 antigen isoform A ( 238) 490 123.3 3.8e-28
NP_001244319 (OMIM: 155740) CD63 antigen isoform A ( 238) 490 123.3 3.8e-28
NP_001254627 (OMIM: 155740) CD63 antigen isoform A ( 238) 490 123.3 3.8e-28
NP_001244320 (OMIM: 155740) CD63 antigen isoform A ( 238) 490 123.3 3.8e-28
NP_620599 (OMIM: 179620,602243,609057) CD151 antig ( 253) 486 122.4 7.7e-28
NP_620598 (OMIM: 179620,602243,609057) CD151 antig ( 253) 486 122.4 7.7e-28
NP_001034579 (OMIM: 179620,602243,609057) CD151 an ( 253) 486 122.4 7.7e-28
NP_004348 (OMIM: 179620,602243,609057) CD151 antig ( 253) 486 122.4 7.7e-28
NP_005715 (OMIM: 613134) tetraspanin-3 isoform 1 [ ( 253) 453 114.7 1.6e-25
NP_001244321 (OMIM: 155740) CD63 antigen isoform C ( 215) 428 108.8 8.4e-24
NP_001265672 (OMIM: 300191) tetraspanin-6 isoform ( 129) 395 100.8 1.2e-21
XP_016877346 (OMIM: 613134) PREDICTED: tetraspanin ( 214) 377 96.8 3.3e-20
NP_006666 (OMIM: 613137) tetraspanin-9 [Homo sapie ( 239) 375 96.4 4.9e-20
NP_001161792 (OMIM: 613137) tetraspanin-9 [Homo sa ( 239) 375 96.4 4.9e-20
NP_001244329 (OMIM: 155740) CD63 antigen isoform D ( 156) 373 95.7 5e-20
NP_001244330 (OMIM: 155740) CD63 antigen isoform D ( 156) 373 95.7 5e-20
NP_005718 (OMIM: 613170) tetraspanin-1 [Homo sapie ( 241) 356 91.9 1.1e-18
XP_011538762 (OMIM: 613170) PREDICTED: tetraspanin ( 258) 345 89.4 6.7e-18
NP_001161884 (OMIM: 613134) tetraspanin-3 isoform ( 189) 330 85.8 6.1e-17
XP_006719646 (OMIM: 600769) PREDICTED: tetraspanin ( 237) 329 85.6 8.5e-17
XP_016875402 (OMIM: 600769) PREDICTED: tetraspanin ( 237) 329 85.6 8.5e-17
NP_004607 (OMIM: 600769) tetraspanin-8 [Homo sapie ( 237) 329 85.6 8.5e-17
NP_001020406 (OMIM: 602644) tetraspanin-4 isoform ( 238) 323 84.2 2.2e-16
NP_003262 (OMIM: 602644) tetraspanin-4 isoform a [ ( 238) 323 84.2 2.2e-16
NP_001020409 (OMIM: 602644) tetraspanin-4 isoform ( 238) 323 84.2 2.2e-16
NP_001020407 (OMIM: 602644) tetraspanin-4 isoform ( 238) 323 84.2 2.2e-16
NP_001020405 (OMIM: 602644) tetraspanin-4 isoform ( 238) 323 84.2 2.2e-16
XP_005253159 (OMIM: 602644) PREDICTED: tetraspanin ( 238) 323 84.2 2.2e-16
NP_001020408 (OMIM: 602644) tetraspanin-4 isoform ( 238) 323 84.2 2.2e-16
NP_036471 (OMIM: 613140) tetraspanin-15 [Homo sapi ( 294) 315 82.4 9.5e-16
NP_005714 (OMIM: 613136) tetraspanin-5 [Homo sapie ( 268) 311 81.5 1.7e-15
NP_001760 (OMIM: 143030) CD9 antigen isoform 1 [Ho ( 228) 285 75.3 1e-13
XP_006716023 (OMIM: 610120) PREDICTED: tetraspanin ( 282) 285 75.4 1.2e-13
NP_848657 (OMIM: 610120) tetraspanin-33 [Homo sapi ( 283) 284 75.2 1.4e-13
XP_011518638 (OMIM: 602644) PREDICTED: tetraspanin ( 269) 282 74.7 1.9e-13
NP_944492 (OMIM: 613134) tetraspanin-3 isoform 2 [ ( 228) 267 71.1 1.9e-12
NP_001035122 (OMIM: 151525) leukocyte surface anti ( 219) 262 69.9 4.2e-12
NP_000551 (OMIM: 151525) leukocyte surface antigen ( 219) 262 69.9 4.2e-12
XP_005253871 (OMIM: 143030) PREDICTED: CD9 antigen ( 249) 253 67.9 2e-11
XP_011519214 (OMIM: 613137) PREDICTED: tetraspanin ( 175) 243 65.4 7.9e-11
XP_011519215 (OMIM: 613137) PREDICTED: tetraspanin ( 175) 243 65.4 7.9e-11
NP_001020015 (OMIM: 176807,600623) CD82 antigen is ( 242) 224 61.0 2.2e-09
NP_004347 (OMIM: 186845,613496) CD81 antigen isofo ( 236) 223 60.8 2.5e-09
>>NP_004606 (OMIM: 300096,300210) tetraspanin-7 [Homo sa (249 aa)
initn: 1663 init1: 1663 opt: 1663 Z-score: 2110.0 bits: 397.9 E(85289): 8.7e-111
Smith-Waterman score: 1663; 99.2% identity (100.0% similar) in 249 aa overlap (1-249:1-249)
10 20 30 40 50 60
pF1KE6 MASRRMETKPVITCLKTLLIIYSFVFWITGVILLAVGVWGKLTLGTYISLIAKNSTNAPY
::::::::::::::::::::::::::::::::::::::::::::::::::::.:::::::
NP_004 MASRRMETKPVITCLKTLLIIYSFVFWITGVILLAVGVWGKLTLGTYISLIAENSTNAPY
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE6 VLIGTGTTIVVFGLFGCFATCRGSPWMLKLYAMFLSLVFLAELVAGISGFVFRHEIKDTF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_004 VLIGTGTTIVVFGLFGCFATCRGSPWMLKLYAMFLSLVFLAELVAGISGFVFRHEIKDTF
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE6 LRTYTDTMQTYNGNDERSRAVDHVQRSLSCCGVQNYTNWSTSPYFLEHGIPPSCCMNETD
::::::.:::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_004 LRTYTDAMQTYNGNDERSRAVDHVQRSLSCCGVQNYTNWSTSPYFLEHGIPPSCCMNETD
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE6 CNPQDLHNLTVAATKVNQKGCYDLVTSFMETNMGIIAGVAFGIAFSQLIGMLLACCLSRF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_004 CNPQDLHNLTVAATKVNQKGCYDLVTSFMETNMGIIAGVAFGIAFSQLIGMLLACCLSRF
190 200 210 220 230 240
pF1KE6 ITANQYEMV
:::::::::
NP_004 ITANQYEMV
>>NP_003261 (OMIM: 300191) tetraspanin-6 isoform a [Homo (245 aa)
initn: 841 init1: 635 opt: 1011 Z-score: 1285.2 bits: 245.3 E(85289): 7.6e-65
Smith-Waterman score: 1011; 58.1% identity (83.9% similar) in 248 aa overlap (3-249:5-245)
10 20 30 40 50
pF1KE6 MASRRMETKPVITCLKTLLIIYSFVFWITGVILLAVGVWGKLTLGTYISLIAKNSTNA
:::..:::::::.:..:.::.:.::::::::::::.:::..: .:.::. ...::.
NP_003 MASPSRRLQTKPVITCFKSVLLIYTFIFWITGVILLAVGIWGKVSLENYFSLLNEKATNV
10 20 30 40 50 60
60 70 80 90 100 110
pF1KE6 PYVLIGTGTTIVVFGLFGCFATCRGSPWMLKLYAMFLSLVFLAELVAGISGFVFRHEIKD
:.:::.:::.:...: ::::::::.: ::::::::::.::::.::::.: :::::::::.
NP_003 PFVLIATGTVIILLGTFGCFATCRASAWMLKLYAMFLTLVFLVELVAAIVGFVFRHEIKN
70 80 90 100 110 120
120 130 140 150 160 170
pF1KE6 TFLRTYTDTMQTYNGN-DERSRAVDHVQRSLSCCGVQNYTNWSTSPYFLEHGIPPSCCMN
.: .: ... ::.. : ::.:::..: .: :::: .: .:. . :. :.:.: :::
NP_003 SFKNNYEKALKQYNSTGDYRSHAVDKIQNTLHCCGVTDYRDWTDTNYYSEKGFPKSCCKL
130 140 150 160 170 180
180 190 200 210 220 230
pF1KE6 ETDCNPQDLHNLTVAATKVNQKGCYDLVTSFMETNMGIIAGVAFGIAFSQLIGMLLACCL
: ::.:: : :::..::. : ...:..::..::..::.: ::::..:: ::
NP_003 E-DCTPQR------DADKVNNEGCFIKVMTIIESEMGVVAGISFGVACFQLIGIFLAYCL
190 200 210 220 230
240
pF1KE6 SRFITANQYEMV
:: :: ::::.:
NP_003 SRAITNNQYEIV
240
>>NP_001265669 (OMIM: 300191) tetraspanin-6 isoform b pr (157 aa)
initn: 423 init1: 220 opt: 593 Z-score: 758.8 bits: 147.2 E(85289): 1.6e-35
Smith-Waterman score: 593; 54.3% identity (78.0% similar) in 164 aa overlap (87-249:1-157)
60 70 80 90 100 110
pF1KE6 NAPYVLIGTGTTIVVFGLFGCFATCRGSPWMLKLYAMFLSLVFLAELVAGISGFVFRHEI
:::::::::.::::.::::.: ::::::::
NP_001 MLKLYAMFLTLVFLVELVAAIVGFVFRHEI
10 20 30
120 130 140 150 160 170
pF1KE6 KDTFLRTYTDTMQTYNGN-DERSRAVDHVQRSLSCCGVQNYTNWSTSPYFLEHGIPPSCC
:..: .: ... ::.. : ::.:::..: .: :::: .: .:. . :. :.:.: :::
NP_001 KNSFKNNYEKALKQYNSTGDYRSHAVDKIQNTLHCCGVTDYRDWTDTNYYSEKGFPKSCC
40 50 60 70 80 90
180 190 200 210 220 230
pF1KE6 MNETDCNPQDLHNLTVAATKVNQKGCYDLVTSFMETNMGIIAGVAFGIAFSQLIGMLLAC
: ::.:: : :::..::. : ...:..::..::..::.: ::::..::
NP_001 KLE-DCTPQR------DADKVNNEGCFIKVMTIIESEMGVVAGISFGVACFQLIGIFLAY
100 110 120 130 140
240
pF1KE6 CLSRFITANQYEMV
:::: :: ::::.:
NP_001 CLSRAITNNQYEIV
150
>>XP_011529320 (OMIM: 300191) PREDICTED: tetraspanin-6 i (157 aa)
initn: 423 init1: 220 opt: 593 Z-score: 758.8 bits: 147.2 E(85289): 1.6e-35
Smith-Waterman score: 593; 54.3% identity (78.0% similar) in 164 aa overlap (87-249:1-157)
60 70 80 90 100 110
pF1KE6 NAPYVLIGTGTTIVVFGLFGCFATCRGSPWMLKLYAMFLSLVFLAELVAGISGFVFRHEI
:::::::::.::::.::::.: ::::::::
XP_011 MLKLYAMFLTLVFLVELVAAIVGFVFRHEI
10 20 30
120 130 140 150 160 170
pF1KE6 KDTFLRTYTDTMQTYNGN-DERSRAVDHVQRSLSCCGVQNYTNWSTSPYFLEHGIPPSCC
:..: .: ... ::.. : ::.:::..: .: :::: .: .:. . :. :.:.: :::
XP_011 KNSFKNNYEKALKQYNSTGDYRSHAVDKIQNTLHCCGVTDYRDWTDTNYYSEKGFPKSCC
40 50 60 70 80 90
180 190 200 210 220 230
pF1KE6 MNETDCNPQDLHNLTVAATKVNQKGCYDLVTSFMETNMGIIAGVAFGIAFSQLIGMLLAC
: ::.:: : :::..::. : ...:..::..::..::.: ::::..::
XP_011 KLE-DCTPQR------DADKVNNEGCFIKVMTIIESEMGVVAGISFGVACFQLIGIFLAY
100 110 120 130 140
240
pF1KE6 CLSRFITANQYEMV
:::: :: ::::.:
XP_011 CLSRAITNNQYEIV
150
>>NP_001265670 (OMIM: 300191) tetraspanin-6 isoform b pr (157 aa)
initn: 423 init1: 220 opt: 593 Z-score: 758.8 bits: 147.2 E(85289): 1.6e-35
Smith-Waterman score: 593; 54.3% identity (78.0% similar) in 164 aa overlap (87-249:1-157)
60 70 80 90 100 110
pF1KE6 NAPYVLIGTGTTIVVFGLFGCFATCRGSPWMLKLYAMFLSLVFLAELVAGISGFVFRHEI
:::::::::.::::.::::.: ::::::::
NP_001 MLKLYAMFLTLVFLVELVAAIVGFVFRHEI
10 20 30
120 130 140 150 160 170
pF1KE6 KDTFLRTYTDTMQTYNGN-DERSRAVDHVQRSLSCCGVQNYTNWSTSPYFLEHGIPPSCC
:..: .: ... ::.. : ::.:::..: .: :::: .: .:. . :. :.:.: :::
NP_001 KNSFKNNYEKALKQYNSTGDYRSHAVDKIQNTLHCCGVTDYRDWTDTNYYSEKGFPKSCC
40 50 60 70 80 90
180 190 200 210 220 230
pF1KE6 MNETDCNPQDLHNLTVAATKVNQKGCYDLVTSFMETNMGIIAGVAFGIAFSQLIGMLLAC
: ::.:: : :::..::. : ...:..::..::..::.: ::::..::
NP_001 KLE-DCTPQR------DADKVNNEGCFIKVMTIIESEMGVVAGISFGVACFQLIGIFLAY
100 110 120 130 140
240
pF1KE6 CLSRFITANQYEMV
:::: :: ::::.:
NP_001 CLSRAITNNQYEIV
150
>>NP_001265671 (OMIM: 300191) tetraspanin-6 isoform c pr (137 aa)
initn: 322 init1: 217 opt: 495 Z-score: 635.6 bits: 124.2 E(85289): 1.2e-28
Smith-Waterman score: 495; 51.4% identity (76.4% similar) in 144 aa overlap (87-229:1-137)
60 70 80 90 100 110
pF1KE6 NAPYVLIGTGTTIVVFGLFGCFATCRGSPWMLKLYAMFLSLVFLAELVAGISGFVFRHEI
:::::::::.::::.::::.: ::::::::
NP_001 MLKLYAMFLTLVFLVELVAAIVGFVFRHEI
10 20 30
120 130 140 150 160 170
pF1KE6 KDTFLRTYTDTMQTYNGN-DERSRAVDHVQRSLSCCGVQNYTNWSTSPYFLEHGIPPSCC
:..: .: ... ::.. : ::.:::..: .: :::: .: .:. . :. :.:.: :::
NP_001 KNSFKNNYEKALKQYNSTGDYRSHAVDKIQNTLHCCGVTDYRDWTDTNYYSEKGFPKSCC
40 50 60 70 80 90
180 190 200 210 220 230
pF1KE6 MNETDCNPQDLHNLTVAATKVNQKGCYDLVTSFMETNMGIIAGVAFGIAFSQLIGMLLAC
: ::.:: : :::..::. : ...:..::..::..::.: : :
NP_001 KLE-DCTPQR------DADKVNNEGCFIKVMTIIESEMGVVAGISFGVACFQDI
100 110 120 130
240
pF1KE6 CLSRFITANQYEMV
>>NP_001771 (OMIM: 155740) CD63 antigen isoform A [Homo (238 aa)
initn: 512 init1: 356 opt: 490 Z-score: 626.2 bits: 123.3 E(85289): 3.8e-28
Smith-Waterman score: 490; 30.2% identity (68.2% similar) in 245 aa overlap (6-249:1-238)
10 20 30 40 50 60
pF1KE6 MASRRMETKPVITCLKTLLIIYSFVFWITGVILLAVGVWGKLTLGTYISLIAKNSTNAPY
: .. . :.: :: . ..: .: :.:::: ..:.:. : : .. :
NP_001 MAVEGGMKCVKFLLYVLLLAFCACAVGLIAVGVGAQLVLSQTIIQGATPGSLLPV
10 20 30 40 50
70 80 90 100 110 120
pF1KE6 VLIGTGTTIVVFGLFGCFATCRGSPWMLKLYAMFLSLVFLAELVAGISGFVFRHEIKDTF
:.:..:. . . .. :: ..:. . .. .:.::::..:.:..:.:.:.::: .. . :
NP_001 VIIAVGVFLFLVAFVGCCGACKENYCLMITFAIFLSLIMLVEVAAAIAGYVFRDKVMSEF
60 70 80 90 100 110
130 140 150 160 170
pF1KE6 LRTYTDTMQTYNGNDERSRAVDHVQRSLSCCGVQNYTNWSTSPYFLEHGIPPSCCMNET-
.. . :..: :.. . .:..: ...:::. :::.: : . .. .: :::.: :
NP_001 NNNFRQQMENYPKNNHTASILDRMQADFKCCGAANYTDWEKIPSMSKNRVPDSCCINVTV
120 130 140 150 160 170
180 190 200 210 220 230
pF1KE6 DCNPQDLHNLTVAATKVNQKGCYDLVTSFMETNMGIIAGVAFGIAFSQLIGMLLACCLSR
:. .. ....:: . . .... :. ..:..:.:::: ...:...:::: .
NP_001 GCG------INFNEKAIHKEGCVEKIGGWLRKNVLVVAAAALGIAFVEVLGIVFACCLVK
180 190 200 210 220
240
pF1KE6 FITANQYEMV
: .. ::..
NP_001 SIRSG-YEVM
230
>>NP_001244318 (OMIM: 155740) CD63 antigen isoform A [Ho (238 aa)
initn: 512 init1: 356 opt: 490 Z-score: 626.2 bits: 123.3 E(85289): 3.8e-28
Smith-Waterman score: 490; 30.2% identity (68.2% similar) in 245 aa overlap (6-249:1-238)
10 20 30 40 50 60
pF1KE6 MASRRMETKPVITCLKTLLIIYSFVFWITGVILLAVGVWGKLTLGTYISLIAKNSTNAPY
: .. . :.: :: . ..: .: :.:::: ..:.:. : : .. :
NP_001 MAVEGGMKCVKFLLYVLLLAFCACAVGLIAVGVGAQLVLSQTIIQGATPGSLLPV
10 20 30 40 50
70 80 90 100 110 120
pF1KE6 VLIGTGTTIVVFGLFGCFATCRGSPWMLKLYAMFLSLVFLAELVAGISGFVFRHEIKDTF
:.:..:. . . .. :: ..:. . .. .:.::::..:.:..:.:.:.::: .. . :
NP_001 VIIAVGVFLFLVAFVGCCGACKENYCLMITFAIFLSLIMLVEVAAAIAGYVFRDKVMSEF
60 70 80 90 100 110
130 140 150 160 170
pF1KE6 LRTYTDTMQTYNGNDERSRAVDHVQRSLSCCGVQNYTNWSTSPYFLEHGIPPSCCMNET-
.. . :..: :.. . .:..: ...:::. :::.: : . .. .: :::.: :
NP_001 NNNFRQQMENYPKNNHTASILDRMQADFKCCGAANYTDWEKIPSMSKNRVPDSCCINVTV
120 130 140 150 160 170
180 190 200 210 220 230
pF1KE6 DCNPQDLHNLTVAATKVNQKGCYDLVTSFMETNMGIIAGVAFGIAFSQLIGMLLACCLSR
:. .. ....:: . . .... :. ..:..:.:::: ...:...:::: .
NP_001 GCG------INFNEKAIHKEGCVEKIGGWLRKNVLVVAAAALGIAFVEVLGIVFACCLVK
180 190 200 210 220
240
pF1KE6 FITANQYEMV
: .. ::..
NP_001 SIRSG-YEVM
230
>>NP_001244319 (OMIM: 155740) CD63 antigen isoform A [Ho (238 aa)
initn: 512 init1: 356 opt: 490 Z-score: 626.2 bits: 123.3 E(85289): 3.8e-28
Smith-Waterman score: 490; 30.2% identity (68.2% similar) in 245 aa overlap (6-249:1-238)
10 20 30 40 50 60
pF1KE6 MASRRMETKPVITCLKTLLIIYSFVFWITGVILLAVGVWGKLTLGTYISLIAKNSTNAPY
: .. . :.: :: . ..: .: :.:::: ..:.:. : : .. :
NP_001 MAVEGGMKCVKFLLYVLLLAFCACAVGLIAVGVGAQLVLSQTIIQGATPGSLLPV
10 20 30 40 50
70 80 90 100 110 120
pF1KE6 VLIGTGTTIVVFGLFGCFATCRGSPWMLKLYAMFLSLVFLAELVAGISGFVFRHEIKDTF
:.:..:. . . .. :: ..:. . .. .:.::::..:.:..:.:.:.::: .. . :
NP_001 VIIAVGVFLFLVAFVGCCGACKENYCLMITFAIFLSLIMLVEVAAAIAGYVFRDKVMSEF
60 70 80 90 100 110
130 140 150 160 170
pF1KE6 LRTYTDTMQTYNGNDERSRAVDHVQRSLSCCGVQNYTNWSTSPYFLEHGIPPSCCMNET-
.. . :..: :.. . .:..: ...:::. :::.: : . .. .: :::.: :
NP_001 NNNFRQQMENYPKNNHTASILDRMQADFKCCGAANYTDWEKIPSMSKNRVPDSCCINVTV
120 130 140 150 160 170
180 190 200 210 220 230
pF1KE6 DCNPQDLHNLTVAATKVNQKGCYDLVTSFMETNMGIIAGVAFGIAFSQLIGMLLACCLSR
:. .. ....:: . . .... :. ..:..:.:::: ...:...:::: .
NP_001 GCG------INFNEKAIHKEGCVEKIGGWLRKNVLVVAAAALGIAFVEVLGIVFACCLVK
180 190 200 210 220
240
pF1KE6 FITANQYEMV
: .. ::..
NP_001 SIRSG-YEVM
230
>>NP_001254627 (OMIM: 155740) CD63 antigen isoform A [Ho (238 aa)
initn: 512 init1: 356 opt: 490 Z-score: 626.2 bits: 123.3 E(85289): 3.8e-28
Smith-Waterman score: 490; 30.2% identity (68.2% similar) in 245 aa overlap (6-249:1-238)
10 20 30 40 50 60
pF1KE6 MASRRMETKPVITCLKTLLIIYSFVFWITGVILLAVGVWGKLTLGTYISLIAKNSTNAPY
: .. . :.: :: . ..: .: :.:::: ..:.:. : : .. :
NP_001 MAVEGGMKCVKFLLYVLLLAFCACAVGLIAVGVGAQLVLSQTIIQGATPGSLLPV
10 20 30 40 50
70 80 90 100 110 120
pF1KE6 VLIGTGTTIVVFGLFGCFATCRGSPWMLKLYAMFLSLVFLAELVAGISGFVFRHEIKDTF
:.:..:. . . .. :: ..:. . .. .:.::::..:.:..:.:.:.::: .. . :
NP_001 VIIAVGVFLFLVAFVGCCGACKENYCLMITFAIFLSLIMLVEVAAAIAGYVFRDKVMSEF
60 70 80 90 100 110
130 140 150 160 170
pF1KE6 LRTYTDTMQTYNGNDERSRAVDHVQRSLSCCGVQNYTNWSTSPYFLEHGIPPSCCMNET-
.. . :..: :.. . .:..: ...:::. :::.: : . .. .: :::.: :
NP_001 NNNFRQQMENYPKNNHTASILDRMQADFKCCGAANYTDWEKIPSMSKNRVPDSCCINVTV
120 130 140 150 160 170
180 190 200 210 220 230
pF1KE6 DCNPQDLHNLTVAATKVNQKGCYDLVTSFMETNMGIIAGVAFGIAFSQLIGMLLACCLSR
:. .. ....:: . . .... :. ..:..:.:::: ...:...:::: .
NP_001 GCG------INFNEKAIHKEGCVEKIGGWLRKNVLVVAAAALGIAFVEVLGIVFACCLVK
180 190 200 210 220
240
pF1KE6 FITANQYEMV
: .. ::..
NP_001 SIRSG-YEVM
230
249 residues in 1 query sequences
60827320 residues in 85289 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Tue Nov 8 11:19:44 2016 done: Tue Nov 8 11:19:45 2016
Total Scan time: 4.980 Total Display time: -0.020
Function used was FASTA [36.3.4 Apr, 2011]